HG10010618 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10010618
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RNA-binding KH domain-containing protein PEPPER-like
Location	Chr06: 24035516 .. 24040409 (+)
RNA-Seq Expression	HG10010618
Synteny	HG10010618

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAACCAGGTGATATTCCTCTATACCCTTCCATGCCCGCCATGGCTCCCCTTCCTGTTTCTATGCCCTTACCTGGGACTCTATTGGTTTCCGAGCCCGGACATTCCGTCACCGGGAAACGCCGACGAGAGGACGACCCGATCGTTCCCAATTCGGAAGCCTCAGATGTATCGGCTCCCAAGAGACAGGCGAAGGCTCATGACGTGCTTTTCAGAATCGTTGTGCCCTCCAAGCAGATCGGGAAGGTTATTGGTAAAGTTGGTTGCCGAATCCAGAAGGTTCGTGAGGAGACCAAAGCTACAATTAAGATTGCGGATGCAGTCGCGGTATGGTTCTTGTATTTGATTTTGAGTGCTTCGGGTTAGGGTTTTCGTTTCTCTTTTCCTTTGTTTGGCTATGGAGGAAGTACTAAAAGAAAACTTCATGTTTTTCACTATATTTAATTTTAGCGGCGGTTTTTTTTTCTTCTCTTAAATCTTTTGCTGGTTGTGTTGTATTGTATGTCAAATGGTTGTATTGGTGACAATTCGAGCTTTTGTTGATGTTTCAGCGGTATGAAGAACGTGTTATCATTATAAGTTCCAAGGACAATGAGAATTCGGTTACTGATGCGGAGAAAGCACTTCAGCAAATTGCAGCACTGATATTGAAGGTCATACATCCCTAACTGCTAGACTGTACTATAGAGTGTTATATTTATTTTCTTGTGTCATGTTGAGTCTCAAAGAGTCTTTTCTTTGTTTTGGTACATGTTTGGGGTCAATTTAGCCAGTCAGAGAGATTTAGTTAGTGTTAGAAGTTCTTTATTTCTTAATTCTTATAGTTTTTTTTTTTAAAATATTGTTGTTAATTCTCTATAAAGTGAGGCTGTCAGCTTTGTGTTTACACATATTCATAATCAAATTTTATTTATTGAGTGACATATCTGTTTAAAAGCTTTCGGCTACACCACAGTGGTTGTGAGGGTGAGGACATGTTGGAGGAGGTGCTTGTTAATAATTCTCCTTAGGGAGCCAGGTTCTTTGGCAATTGCTTTCTTTTTTTTTTTTTTTTGCTATTTTATGGAATTTGTGCCTTGAGAGAAATAGGATATTCTTAGGGATGCATAAAAGTATTGGAGGAGGTTTGGAGTGTGACAAATTTAAATGCCTCTCTTTGGGAATTTTTGTTTTTAAAGAGTTCTGCAATATGCATTATTTTTTGTTCTTAACAATTAGAGCATTCTTCTGTTATTTTGCTTTTTTATATTCTGTTTTTGTTTTCTGTTGTTCGGAAGTTCTTTTCTGTAGGCTGTTCCTTTTAATAGAAGTTACATTTTTATATATATTAAAAGAAAACATATTCCTTATCTGCCCTGGTTGATATATATATAGAAGAAAAAAAAAATTTGCCTTTATCCACAATGGTTGAAAGCTTCTTCATGAATGTTTCTTTGCCGTATTGACGTGTATAATGAAGTAGTAATGATGGAGGTAACTGGTGTTAATGACTTCAACCAAAGGCTGGCAACTCTAGTCCTTTGACTGCCTTAAAAATTTTGTTCTTTTTCCGTATCAAGAAGTTAAATATCTAGATGAAAATAAAAAGACAACACTTGAAGTTATTGATTTTCAAGGCAGGGTAAGTAACAGCACTTTCATCATGTGATTTGTTCTTTTTTATTTTTTATGAGTAACAATGTGCAATTGAGCTAGCTTACACTTACATGCCCCTTGACTATTAAACTACCCCTCTGATGTCAAGAACTTGTAGTATATTTGATAACTTAGCTTGGCAGCCATCATTGTTTTTAACCTACAAGTGTGGATTGCTATCCTTTGCTCAAATAATCTGTCCATGCTTGATCAATTAAATTAGTCCTCATCTTGAAGTGCAAATGTTCACGTGGTAAAATAGAATGATAGCTTCTCATATTTATTTTAGATAATTTTTGAGAATTTTGTATCCGCTACTTTTATTTATTTTTATTTTTTAATTATACTTATCATACTTTTACAGGAAGATGGTACAAGCATTGAGGAACTAAAAGTTGGAACAGGGCATGTGGCTGCCAATACTATAAGGCTCCTAATAGCAGGATCTCAAGCAGGTTCCTTGATTGGTGCCTCAGGTCAAAATATTGAGAAATTGAGGAATTCTTCTGGTGCATCAATTACGATTCTTGCCCCAAATCAATTACCTCTTTGTGCATCTGCTCATGAATCTGACCGAGTGGTGCAAGTGAGTTTTTCCACTCTGTCAGAATTTAGAACATAAATAGTGTGTATCATTCTTTTTTTTTTATGAGAAACAAGTATTATAGTGTATAATTTTTTCTTCCTTCCTATTAATTTCATCACTATTTGTTTGTATCATAATGATATGACCAATGTTACCGCTATGCTTGATGCTATTTCATTTAAATATTGAGCAAGATGTTATAGTAGTTGCCCATTGCAAGTAATAAGGTGAAAACAAGCTTTGGTTCTACTTTTCTAACGTTTTCTAAATGTTCACTAACCGGAAAAATTGACTTTCATGAGTAGAGTGCAGCTAACTAGTATTGGGTGATTCTTGATATGAATATTGACCACACAATACATATCCCTACTTTTGAAATTTCATAATGTTTGCACCATTGTTTGTGTTCTACTTTGGAGCTTTTCAGTACCCTAGATCTCGTTTTTTGTCCCCTTCTCCTTCCTCGGGCTTCTCTTCCGATTATCTTGTCTTTCTTATGAGGACTCTTTCTCTTCTCGATCATCCCTTCATTTTGTTCACTCTGGAAGACTAAGTTCTCTATAAGGTTAAGTTCTTTGCTTGGCAAGTCTTGCATGGAAGAGTGAACACTTTAGACCGTGTACTAATACTCGCTTCTTTTTGGGACTATAGTGGTGCTCCCATCATAAAGGTGTGTTAGAGAATCTTGACCATATCCTTTCGGGTTGCAATTATGCTCAATCGATAAGCTCCAGATTTCAGAATGCTTTTGGAATCTCATTGGCTTGGAGCACTAGGGATCATAGGGATTGGATGGAGAAGGTTTTGTCGTCTCACCCTTTTAGGGAGAAGGATACTTTTCTTTGGCATGCGTGCTTCTGTCATTCTTTAGGGGTTTTGGACCATGTTTTCAAAATCGTTTGAGGCATAAGCCTTGAGGTGAGGTGGCCTTCCGATGCCTCAAGGCTTAGGCTTGTGCGAGGTAAAAGGAGGCTCACACATTATCGATAGAGGCTTGAGCCTTTGTGCTTCTGCCATTGAGGCGTGAGAGGCATAAGCCTCGGTGAAAAGTGGGAAAAATTTTAACCAGTGGACTCTGTTCCAAAATTTAGAAATTTTGCCAATTCTCTTCTCATCTGCAGTTTTTTTCCCCTCTTTAGAATATTCACACCTGGTGAATTTTGTAATGCTCAGATTTATAGATCAATGAAATTCATCTTAATGAATTGTATGCACCATTCTTTTTAGCCATTTCTGAGTCTTCTTTGCTATCTGTCTGTATCGCTCCTTCCCAGTTTGATTTGTAACTATGTTTTCATATAATGAGAAGGAAGTTGTCGATATCTTTTGTAGTCTTACACCTGGATAATATTTCTAAACAATTCATTCTACAAGTTCTTGTTTCTTGTGGGATTGTGTGATTTCACTCTGTAATCTCAGACTATTACTATTTGTAGATTTTAGTGCGCTTTCTTTGTGAGAAATTGGAGTTTCAACAGGGGTTTGTTTGTTTGAGAAGCTGTTTCATTTTGGAATTTAAGATTGGCATTAGAGGATAAGTTACAATGTTTCTTTCAAGATTGGGATACTCCATTGCTTTCTCCGATTCTGCTTTGGGAATGAAGACCCTGTGAAGTAGTTAGGGAATGGAAATAGAGAAGGTTGCTAGAATTTTCTGCCAGTCTTATTCTTCCAGATACAGTTCTCGTTAATGATCTTAAATTGTACATGCCAAGAATTTTTTTTAATTTCAAGTTACTGAATCATTCTTAAATGTTCACTTCACATAATGTTTATCAAATGAATCATCTATCGAACTTTAGGAAAATGTTTTGAAATTGTCATGCTCATTCTCACATTGCTAGGCTACTTTTCTTCATGTCTTGTTACACATCGTGTCCCATCTAATATCATTTTTTGAGATGCTAAGATCATGTTATAAGAGCTGGCATTAATGATTAAGTTTCGTTTGGAACTCAGATATCAGGGGATATTCCGGCAGTTTTGAAGGCTCTTGAGGAGATTGGCAATCAGCTAAGGTCCTAAATTGAACAAAATCTTGAGAGTTTATCTGATTCATGCACACTTCTGAAAATTTTACATAAACTTTGTGGAGTACAAGATAATTGCAGCAGATGTTTCTTGAGACCAGTCAAATCTTGGTATCCTATTTTTCTTTCTATTTTTTTAGTGATTTTGGGTTGAATTCAATTTCAGGGTAAATCCACCTCGGCAAGTCATTTCCGTTAGCCCAACATATAATTATAATACAATGCACCCGCCACAGTCATATATGGATCCAACCTCAGGTTATTCAGTGGTTTTCTGTATCAAATAAATCATTTCTGATTCTGTCTTTTGTGTGTCTGTGAAGTTTTAATATTTTTTCTTCTAACCACATCATCTTTAGGAAAACCAATCTTGCAGTTAATTATGTAACCTTCGAGATGTTGATATCGGAGACGTTGGTGGGTGGGTTGATCGGTATTGGTGGCTTCAACATATCAAGAATCAGAAATGAATCTGGGGCTACTATCAAGGTCAGAAAACCAAGCAGTTTTATTTCATTATGAAAGATCCTGAAATTCCATTCCTAAATCAATATCCTTACATTATTCTTTACAGGTTTGTGGTGGCAGAGGTGAACAAAATTACAGGCAAATACAATTTGGTGGAAGTGCTGAACAGGCATGA

mRNA sequence

ATGCAACCAGGTGATATTCCTCTATACCCTTCCATGCCCGCCATGGCTCCCCTTCCTGTTTCTATGCCCTTACCTGGGACTCTATTGGTTTCCGAGCCCGGACATTCCGTCACCGGGAAACGCCGACGAGAGGACGACCCGATCGTTCCCAATTCGGAAGCCTCAGATGTATCGGCTCCCAAGAGACAGGCGAAGGCTCATGACGTGCTTTTCAGAATCGTTGTGCCCTCCAAGCAGATCGGGAAGGTTATTGGTAAAGTTGGTTGCCGAATCCAGAAGGTTCGTGAGGAGACCAAAGCTACAATTAAGATTGCGGATGCAGTCGCGCGGTATGAAGAACGTGTTATCATTATAAGTTCCAAGGACAATGAGAATTCGGTTACTGATGCGGAGAAAGCACTTCAGCAAATTGCAGCACTGATATTGAAGGAAGATGGTACAAGCATTGAGGAACTAAAAGTTGGAACAGGGCATGTGGCTGCCAATACTATAAGGCTCCTAATAGCAGGATCTCAAGCAGGTTCCTTGATTGGTGCCTCAGGTCAAAATATTGAGAAATTGAGGAATTCTTCTGGTGCATCAATTACGATTCTTGCCCCAAATCAATTACCTCTTTGTGCATCTGCTCATGAATCTGACCGAGTGGTGCAAATATCAGGGGATATTCCGGCAGTTTTGAAGGCTCTTGAGGAGATTGGCAATCAGCTAAGGAAAACCAATCTTGCAGTTAATTATGTAACCTTCGAGATGTTGATATCGGAGACGTTGGTGGGTGGGTTGATCGGTATTGGTGGCTTCAACATATCAAGAATCAGAAATGAATCTGGGGCTACTATCAAGGTTTGTGGTGGCAGAGGTGAACAAAATTACAGGCAAATACAATTTGGTGGAAGTGCTGAACAGGCATGA

Coding sequence (CDS)

ATGCAACCAGGTGATATTCCTCTATACCCTTCCATGCCCGCCATGGCTCCCCTTCCTGTTTCTATGCCCTTACCTGGGACTCTATTGGTTTCCGAGCCCGGACATTCCGTCACCGGGAAACGCCGACGAGAGGACGACCCGATCGTTCCCAATTCGGAAGCCTCAGATGTATCGGCTCCCAAGAGACAGGCGAAGGCTCATGACGTGCTTTTCAGAATCGTTGTGCCCTCCAAGCAGATCGGGAAGGTTATTGGTAAAGTTGGTTGCCGAATCCAGAAGGTTCGTGAGGAGACCAAAGCTACAATTAAGATTGCGGATGCAGTCGCGCGGTATGAAGAACGTGTTATCATTATAAGTTCCAAGGACAATGAGAATTCGGTTACTGATGCGGAGAAAGCACTTCAGCAAATTGCAGCACTGATATTGAAGGAAGATGGTACAAGCATTGAGGAACTAAAAGTTGGAACAGGGCATGTGGCTGCCAATACTATAAGGCTCCTAATAGCAGGATCTCAAGCAGGTTCCTTGATTGGTGCCTCAGGTCAAAATATTGAGAAATTGAGGAATTCTTCTGGTGCATCAATTACGATTCTTGCCCCAAATCAATTACCTCTTTGTGCATCTGCTCATGAATCTGACCGAGTGGTGCAAATATCAGGGGATATTCCGGCAGTTTTGAAGGCTCTTGAGGAGATTGGCAATCAGCTAAGGAAAACCAATCTTGCAGTTAATTATGTAACCTTCGAGATGTTGATATCGGAGACGTTGGTGGGTGGGTTGATCGGTATTGGTGGCTTCAACATATCAAGAATCAGAAATGAATCTGGGGCTACTATCAAGGTTTGTGGTGGCAGAGGTGAACAAAATTACAGGCAAATACAATTTGGTGGAAGTGCTGAACAGGCATGA

Protein sequence

MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRKTNLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNESGATIKVCGGRGEQNYRQIQFGGSAEQA

Homology

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BLAST of HG10010618 vs. NCBI nr
Match: ADN34230.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 553.1 bits (1424), Expect = 1.5e-153
Identity = 295/301 (98.01%), Postives = 298/301 (99.00%), Query Frame = 0


Query: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAP 60
           MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGH+VTGKRRREDD IV NS+ASDVSAP
Sbjct: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDVSAP 60

Query: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120
           KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS
Sbjct: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120

Query: 121 KDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180
           KDNENSVTDAEKALQQIAALILKEDG+SIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS
Sbjct: 121 KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180

Query: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRKTN 240
           GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDI AVLKALEEIGNQLRKTN
Sbjct: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRKTN 240

Query: 241 LAVNYVTFEMLISETLVGGLIGIGGFNISRIRNESGATIKVCGGRGEQNYRQIQFGGSAE 300
           LAVNYVTFEMLISETLVGGLIGIGGFNISRIRNESGATIKVCGGRGEQNYRQIQFGGSAE
Sbjct: 241 LAVNYVTFEMLISETLVGGLIGIGGFNISRIRNESGATIKVCGGRGEQNYRQIQFGGSAE 300

Query: 301 Q 302
           Q
Sbjct: 301 Q 301

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BLAST of HG10010618 vs. NCBI nr
Match: XP_038875599.1 (flowering locus K homology domain-like isoform X1 [Benincasa hispida])

HSP 1 Score: 537.0 bits (1382), Expect = 1.1e-148
Identity = 291/326 (89.26%), Postives = 296/326 (90.80%), Query Frame = 0


Query: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAP 60
           MQPGDIPLYPS+P MAPLPVSMPLPGTLLVSEPGH+VTGKRRREDDPIVPNSEASDVSAP
Sbjct: 1   MQPGDIPLYPSIPPMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDPIVPNSEASDVSAP 60

Query: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120
           KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS
Sbjct: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120

Query: 121 KDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180
           KDN+NSVTDAEKALQQIAALILKEDGTS+EELKVGTGHVAANTIRLLIAGSQAGSLIGAS
Sbjct: 121 KDNDNSVTDAEKALQQIAALILKEDGTSVEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180

Query: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR--- 240
           GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR   
Sbjct: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNP 240

Query: 241 ----------------------KTNLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300
                                     +VNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Sbjct: 241 PRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300

Query: 301 GATIKVCGGRGEQNYRQIQFGGSAEQ 302
           GATIKVCGGRGEQNYRQIQFGGSAEQ
Sbjct: 301 GATIKVCGGRGEQNYRQIQFGGSAEQ 326

[Close]

BLAST of HG10010618 vs. NCBI nr
Match: KAA0039772.1 (RNA-binding KH domain-containing protein PEPPER-like [Cucumis melo var. makuwa] >TYK24725.1 RNA-binding KH domain-containing protein PEPPER-like [Cucumis melo var. makuwa])

HSP 1 Score: 528.5 bits (1360), Expect = 3.8e-146
Identity = 290/326 (88.96%), Postives = 294/326 (90.18%), Query Frame = 0


Query: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAP 60
           MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGH+VTGKRRREDD IV NS+ASDVSAP
Sbjct: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDVSAP 60

Query: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120
           KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS
Sbjct: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120

Query: 121 KDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180
           KDNENSVTDAEKALQQIAALILKEDG+SIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS
Sbjct: 121 KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180

Query: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR--- 240
           GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDI AVLKALEEIGNQLR   
Sbjct: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNP 240

Query: 241 ----------------------KTNLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300
                                     +VNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Sbjct: 241 PRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300

Query: 301 GATIKVCGGRGEQNYRQIQFGGSAEQ 302
           GATIKVCGGRGEQNYRQIQFGGSAEQ
Sbjct: 301 GATIKVCGGRGEQNYRQIQFGGSAEQ 326

[Close]

BLAST of HG10010618 vs. NCBI nr
Match: XP_008459768.1 (PREDICTED: RNA-binding KH domain-containing protein PEPPER-like [Cucumis melo])

HSP 1 Score: 528.5 bits (1360), Expect = 3.8e-146
Identity = 290/326 (88.96%), Postives = 294/326 (90.18%), Query Frame = 0


Query: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAP 60
           MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGH+VTGKRRREDD IV NS+ASDVSAP
Sbjct: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDVSAP 60

Query: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120
           KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS
Sbjct: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120

Query: 121 KDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180
           KDNENSVTDAEKALQQIAALILKEDG+SIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS
Sbjct: 121 KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180

Query: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR--- 240
           GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDI AVLKALEEIGNQLR   
Sbjct: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNP 240

Query: 241 ----------------------KTNLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300
                                     +VNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Sbjct: 241 PRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300

Query: 301 GATIKVCGGRGEQNYRQIQFGGSAEQ 302
           GATIKVCGGRGEQNYRQIQFGGSAEQ
Sbjct: 301 GATIKVCGGRGEQNYRQIQFGGSAEQ 326

[Close]

BLAST of HG10010618 vs. NCBI nr
Match: XP_011656837.1 (RNA-binding KH domain-containing protein PEPPER [Cucumis sativus] >KGN46494.1 hypothetical protein Csa_005583 [Cucumis sativus])

HSP 1 Score: 528.1 bits (1359), Expect = 5.0e-146
Identity = 289/326 (88.65%), Postives = 294/326 (90.18%), Query Frame = 0


Query: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAP 60
           MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGH+VTGKRRREDD IV NS+ASD+SAP
Sbjct: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDISAP 60

Query: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120
           KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS
Sbjct: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120

Query: 121 KDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180
           KDNENSVTDAEKALQQIAALILKEDG+SIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS
Sbjct: 121 KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180

Query: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR--- 240
           GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDI AVLKALEEIGNQLR   
Sbjct: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNP 240

Query: 241 ----------------------KTNLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300
                                     +VNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Sbjct: 241 PRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300

Query: 301 GATIKVCGGRGEQNYRQIQFGGSAEQ 302
           GATIKVCGGRGEQNYRQIQFGGSAEQ
Sbjct: 301 GATIKVCGGRGEQNYRQIQFGGSAEQ 326

[Close]

BLAST of HG10010618 vs. ExPASy Swiss-Prot
Match: Q9SZH4 (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 GN=PEP PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.7e-16
Identity = 55/172 (31.98%), Postives = 98/172 (56.98%), Query Frame = 0


Query: 68  DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNENSV 127
           D +FR++VP  ++G +IG+ G  I+K+ EET+A IK+ D      +R+++IS K+   + 
Sbjct: 73  DCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGKEEPEAY 132

Query: 128 TDAEKALQQIAALILKEDG-TSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEK 187
                A+  +  +  +  G    ++  V       +++RLL+A +QA +LIG  G  I+ 
Sbjct: 133 --MSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIGKQGSLIKS 192

Query: 188 LRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRK 239
           +  +SGAS+ IL+  + P  A+  + +R+V + G+   +LKALE I   LR+
Sbjct: 193 IVENSGASVRILSEEETPFYAA--QDERIVDLQGEALKILKALEAIVGHLRR 240

[Close]

BLAST of HG10010618 vs. ExPASy Swiss-Prot
Match: Q9SR13 (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.3e-16
Identity = 59/172 (34.30%), Postives = 100/172 (58.14%), Query Frame = 0


Query: 68  DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN-ENS 127
           + +FR++VP++++G +IG+ G  I+K+ EET+A IKI D      ER +++S K+  E+S
Sbjct: 186 ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESS 245

Query: 128 VTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEK 187
           +  +   L ++   I+  DG   E  +       +   RLL+  SQAGSLIG  G  ++ 
Sbjct: 246 LPPSMDGLLRVHMRIV--DGLDGEASQAPPPSKVST--RLLVPASQAGSLIGKQGGTVKA 305

Query: 188 LRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRK 239
           ++ +S   + +L    LP+ A   + DRVV++ G+  +V +ALE I + LRK
Sbjct: 306 IQEASACIVRVLGSEDLPVFAL--QDDRVVEVVGEPTSVHRALELIASHLRK 351

[Close]

BLAST of HG10010618 vs. ExPASy Swiss-Prot
Match: F4KDN0 (KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.6e-14
Identity = 56/171 (32.75%), Postives = 99/171 (57.89%), Query Frame = 0


Query: 68  DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN-ENS 127
           DV+F+I+  ++  G VIG  G  ++ +  ET A I + + +   EER+I +++ +N E  
Sbjct: 451 DVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPECQ 510

Query: 128 VTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEK 187
            + A+KA+  I + + +     I    +  G  ++ T RL++  SQ G ++G  G  + +
Sbjct: 511 SSPAQKAIMLIFSRLFELATNKI----LDNGPRSSITARLVVPTSQIGCVLGKGGVIVSE 570

Query: 188 LRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR 238
           +R ++GA+I IL   Q P C S  E+D+VVQI+G+ P V +A+  I ++LR
Sbjct: 571 MRKTTGAAIQILKVEQNPKCIS--ENDQVVQITGEFPNVREAIFHITSRLR 615

[Close]

BLAST of HG10010618 vs. ExPASy Swiss-Prot
Match: P58223 (KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18375 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 8.3e-11
Identity = 58/185 (31.35%), Postives = 91/185 (49.19%), Query Frame = 0


Query: 69  VLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIII---------- 128
           V++RI+ P   +G VIGK G  I  +R  TKA IK+ D +    +RVI I          
Sbjct: 36  VVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEE 95

Query: 129 --SSKDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSL 188
              +K     +  A+ AL ++   I+  D  +    K           RLL+  SQ+ SL
Sbjct: 96  IGFTKSENEPLCCAQDALLKVYDAIVASDEEN--NTKTNVDRDDNKECRLLVPFSQSSSL 155

Query: 189 IGASGQNIEKLRNSSGASITILAPN-QLPLCASAHESDRVVQISGDIPAVLKALEEIGNQ 241
           IG +G+NI+++R  + AS+ +++ +   P    A E D VV ISG+  +V +AL  +   
Sbjct: 156 IGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAI 215

[Close]

BLAST of HG10010618 vs. ExPASy Swiss-Prot
Match: P57722 (Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3)

HSP 1 Score: 65.1 bits (157), Expect = 1.6e-09
Identity = 57/199 (28.64%), Postives = 101/199 (50.75%), Query Frame = 0


Query: 47  PIVPNSEASDVS-------APKRQAKAHD------VLFRIVVPSKQIGKVIGKVGCRIQK 106
           PI+P+S    +S         K ++K  +      +  R+++  K++G +IGK G  ++K
Sbjct: 11  PILPHSTLGTLSHHPELHFGGKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKK 70

Query: 107 VREETKATIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDGTSIEELK 166
           +REE+ A I I++      ER++ I+        TDA      + A   +ED  +     
Sbjct: 71  MREESGARINISE--GNCPERIVTITGP------TDAIFKAFAMIAYKFEEDIINSMSNS 130

Query: 167 VGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESD 226
             T      T+RL++  SQ GSLIG  G  I+++R S+GA + + A + LP     + ++
Sbjct: 131 PATSKPPV-TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV-AGDMLP-----NSTE 190

Query: 227 RVVQISGDIPAVLKALEEI 233
           R V ISG   A+++ +++I
Sbjct: 191 RAVTISGTPDAIIQCVKQI 194

[Close]

BLAST of HG10010618 vs. ExPASy TrEMBL
Match: E5GCN1 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 7.0e-154
Identity = 295/301 (98.01%), Postives = 298/301 (99.00%), Query Frame = 0


Query: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAP 60
           MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGH+VTGKRRREDD IV NS+ASDVSAP
Sbjct: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDVSAP 60

Query: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120
           KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS
Sbjct: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120

Query: 121 KDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180
           KDNENSVTDAEKALQQIAALILKEDG+SIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS
Sbjct: 121 KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180

Query: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRKTN 240
           GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDI AVLKALEEIGNQLRKTN
Sbjct: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRKTN 240

Query: 241 LAVNYVTFEMLISETLVGGLIGIGGFNISRIRNESGATIKVCGGRGEQNYRQIQFGGSAE 300
           LAVNYVTFEMLISETLVGGLIGIGGFNISRIRNESGATIKVCGGRGEQNYRQIQFGGSAE
Sbjct: 241 LAVNYVTFEMLISETLVGGLIGIGGFNISRIRNESGATIKVCGGRGEQNYRQIQFGGSAE 300

Query: 301 Q 302
           Q
Sbjct: 301 Q 301

[Close]

BLAST of HG10010618 vs. ExPASy TrEMBL
Match: A0A5A7T8H9 (RNA-binding KH domain-containing protein PEPPER-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002850 PE=4 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 1.9e-146
Identity = 290/326 (88.96%), Postives = 294/326 (90.18%), Query Frame = 0


Query: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAP 60
           MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGH+VTGKRRREDD IV NS+ASDVSAP
Sbjct: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDVSAP 60

Query: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120
           KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS
Sbjct: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120

Query: 121 KDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180
           KDNENSVTDAEKALQQIAALILKEDG+SIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS
Sbjct: 121 KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180

Query: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR--- 240
           GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDI AVLKALEEIGNQLR   
Sbjct: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNP 240

Query: 241 ----------------------KTNLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300
                                     +VNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Sbjct: 241 PRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300

Query: 301 GATIKVCGGRGEQNYRQIQFGGSAEQ 302
           GATIKVCGGRGEQNYRQIQFGGSAEQ
Sbjct: 301 GATIKVCGGRGEQNYRQIQFGGSAEQ 326

[Close]

BLAST of HG10010618 vs. ExPASy TrEMBL
Match: A0A1S3CB11 (RNA-binding KH domain-containing protein PEPPER-like OS=Cucumis melo OX=3656 GN=LOC103498803 PE=4 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 1.9e-146
Identity = 290/326 (88.96%), Postives = 294/326 (90.18%), Query Frame = 0


Query: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAP 60
           MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGH+VTGKRRREDD IV NS+ASDVSAP
Sbjct: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDVSAP 60

Query: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120
           KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS
Sbjct: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120

Query: 121 KDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180
           KDNENSVTDAEKALQQIAALILKEDG+SIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS
Sbjct: 121 KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180

Query: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR--- 240
           GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDI AVLKALEEIGNQLR   
Sbjct: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNP 240

Query: 241 ----------------------KTNLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300
                                     +VNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Sbjct: 241 PRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300

Query: 301 GATIKVCGGRGEQNYRQIQFGGSAEQ 302
           GATIKVCGGRGEQNYRQIQFGGSAEQ
Sbjct: 301 GATIKVCGGRGEQNYRQIQFGGSAEQ 326

[Close]

BLAST of HG10010618 vs. ExPASy TrEMBL
Match: A0A0A0KCF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G103530 PE=4 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 2.4e-146
Identity = 289/326 (88.65%), Postives = 294/326 (90.18%), Query Frame = 0


Query: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAP 60
           MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGH+VTGKRRREDD IV NS+ASD+SAP
Sbjct: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDISAP 60

Query: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120
           KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS
Sbjct: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120

Query: 121 KDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180
           KDNENSVTDAEKALQQIAALILKEDG+SIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS
Sbjct: 121 KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180

Query: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR--- 240
           GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDI AVLKALEEIGNQLR   
Sbjct: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNP 240

Query: 241 ----------------------KTNLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300
                                     +VNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Sbjct: 241 PRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300

Query: 301 GATIKVCGGRGEQNYRQIQFGGSAEQ 302
           GATIKVCGGRGEQNYRQIQFGGSAEQ
Sbjct: 301 GATIKVCGGRGEQNYRQIQFGGSAEQ 326

[Close]

BLAST of HG10010618 vs. ExPASy TrEMBL
Match: A0A6J1H4F3 (flowering locus K homology domain-like OS=Cucurbita moschata OX=3662 GN=LOC111460387 PE=4 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 3.0e-144
Identity = 285/326 (87.42%), Postives = 291/326 (89.26%), Query Frame = 0


Query: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAP 60
           MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVS+ GH+VTGKRRREDD IV NSEA DVSAP
Sbjct: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAP 60

Query: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120
           KRQAKAHDVLFRI+VPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS
Sbjct: 61  KRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120

Query: 121 KDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180
           KD ENSVTDAEKALQ IAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS
Sbjct: 121 KDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180

Query: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRKT- 240
           GQNIEKLRNSSGA+ITILAPNQLPLCASAHESDRVVQISGD+PAVLKALEEIGNQLR   
Sbjct: 181 GQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNP 240

Query: 241 ------------------------NLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300
                                     +VNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Sbjct: 241 PRQVISVSPTYNYNAMHPPQSYIDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300

Query: 301 GATIKVCGGRGEQNYRQIQFGGSAEQ 302
           GATIKVCGGRGEQNYRQIQFGGSAEQ
Sbjct: 301 GATIKVCGGRGEQNYRQIQFGGSAEQ 326

[Close]

BLAST of HG10010618 vs. TAIR 10
Match: AT5G15270.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 95.5 bits (236), Expect = 7.7e-20
Identity = 72/224 (32.14%), Postives = 118/224 (52.68%), Query Frame = 0


Query: 33  PGHSVTGKRRREDDPIVPNSEASDVSAPKRQAKA----------HDVLFRIVVPSKQIGK 92
           P H  + ++R       P S+  D    KR+ +            D +FR + P K+IG 
Sbjct: 9   PDHRDSHRKRSR-----PQSDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVKKIGS 68

Query: 93  VIGKVGCRIQKVREETKATIKIADAVARYEERVI-IISSKDNENSVTDAEK-------AL 152
           VIG+ G  ++++R +T++ I+I +A+   +ERVI I S  D  N+  D EK       AL
Sbjct: 69  VIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGEKVLSPAQDAL 128

Query: 153 QQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGAS 212
            +I   ++ +D  S E+   G   V   T +LL+   Q G ++G  GQ ++ +R+ +GA 
Sbjct: 129 FRIHDRVVADDARS-EDSPEGEKQV---TAKLLVPSDQIGCILGRGGQIVQNIRSETGAQ 188

Query: 213 ITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRK 239
           I I+    +PLCA    SD ++QISG++  V KAL +I ++L +
Sbjct: 189 IRIVKDRNMPLCAL--NSDELIQISGEVLIVKKALLQIASRLHE 221

[Close]

BLAST of HG10010618 vs. TAIR 10
Match: AT5G15270.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 95.5 bits (236), Expect = 7.7e-20
Identity = 72/224 (32.14%), Postives = 118/224 (52.68%), Query Frame = 0


Query: 33  PGHSVTGKRRREDDPIVPNSEASDVSAPKRQAKA----------HDVLFRIVVPSKQIGK 92
           P H  + ++R       P S+  D    KR+ +            D +FR + P K+IG 
Sbjct: 9   PDHRDSHRKRSR-----PQSDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVKKIGS 68

Query: 93  VIGKVGCRIQKVREETKATIKIADAVARYEERVI-IISSKDNENSVTDAEK-------AL 152
           VIG+ G  ++++R +T++ I+I +A+   +ERVI I S  D  N+  D EK       AL
Sbjct: 69  VIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGEKVLSPAQDAL 128

Query: 153 QQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGAS 212
            +I   ++ +D  S E+   G   V   T +LL+   Q G ++G  GQ ++ +R+ +GA 
Sbjct: 129 FRIHDRVVADDARS-EDSPEGEKQV---TAKLLVPSDQIGCILGRGGQIVQNIRSETGAQ 188

Query: 213 ITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRK 239
           I I+    +PLCA    SD ++QISG++  V KAL +I ++L +
Sbjct: 189 IRIVKDRNMPLCAL--NSDELIQISGEVLIVKKALLQIASRLHE 221

[Close]

BLAST of HG10010618 vs. TAIR 10
Match: AT1G14170.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 89.0 bits (219), Expect = 7.2e-18
Identity = 76/267 (28.46%), Postives = 124/267 (46.44%), Query Frame = 0


Query: 67  HDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNE-- 126
           HD ++R + P K+ G +IGK G   +++R ETK+ ++I +A+   EERV+ + S + E  
Sbjct: 9   HDTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELN 68

Query: 127 ------NSVTDAEKALQQIAALIL----KEDGTSIEELKVGTGHVAANTIRLLIAGSQAG 186
                   V  A  AL ++  +++    ++DGT  +      G     T+R+L+   Q G
Sbjct: 69  HFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDN---DLGEKQTVTVRMLVPSDQIG 128

Query: 187 SLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGN 246
            +IG  GQ I+ LRN + A I ++  + LP CA     D ++ I G+   V +AL ++ +
Sbjct: 129 CVIGKGGQVIQNLRNDTNAQIRVI-KDHLPACALTLSHDELLLIIGEPLVVREALYQVAS 188

Query: 247 QLRKTNLAVNYVTFE-----------MLISETL--------------------------- 282
            L        ++              ML+S  L                           
Sbjct: 189 LLHDNPSRFQHLLLSSSSSSMHQPGAMLMSAALTSSHRNYAVRRDIADAREFCVCFICPA 248

[Close]

BLAST of HG10010618 vs. TAIR 10
Match: AT4G26000.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 88.2 bits (217), Expect = 1.2e-17
Identity = 55/172 (31.98%), Postives = 98/172 (56.98%), Query Frame = 0


Query: 68  DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNENSV 127
           D +FR++VP  ++G +IG+ G  I+K+ EET+A IK+ D      +R+++IS K+   + 
Sbjct: 73  DCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGKEEPEAY 132

Query: 128 TDAEKALQQIAALILKEDG-TSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEK 187
                A+  +  +  +  G    ++  V       +++RLL+A +QA +LIG  G  I+ 
Sbjct: 133 --MSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIGKQGSLIKS 192

Query: 188 LRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRK 239
           +  +SGAS+ IL+  + P  A+  + +R+V + G+   +LKALE I   LR+
Sbjct: 193 IVENSGASVRILSEEETPFYAA--QDERIVDLQGEALKILKALEAIVGHLRR 240

[Close]

BLAST of HG10010618 vs. TAIR 10
Match: AT3G04610.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 87.8 bits (216), Expect = 1.6e-17
Identity = 59/172 (34.30%), Postives = 100/172 (58.14%), Query Frame = 0


Query: 68  DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN-ENS 127
           + +FR++VP++++G +IG+ G  I+K+ EET+A IKI D      ER +++S K+  E+S
Sbjct: 186 ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESS 245

Query: 128 VTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEK 187
           +  +   L ++   I+  DG   E  +       +   RLL+  SQAGSLIG  G  ++ 
Sbjct: 246 LPPSMDGLLRVHMRIV--DGLDGEASQAPPPSKVST--RLLVPASQAGSLIGKQGGTVKA 305

Query: 188 LRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRK 239
           ++ +S   + +L    LP+ A   + DRVV++ G+  +V +ALE I + LRK
Sbjct: 306 IQEASACIVRVLGSEDLPVFAL--QDDRVVEVVGEPTSVHRALELIASHLRK 351

The following BLAST results are available for this feature:

BLAST of HG10010618 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN34230.1	1.5e-153	98.01	hypothetical protein [Cucumis melo subsp. melo]	[more]
XP_038875599.1	1.1e-148	89.26	flowering locus K homology domain-like isoform X1 [Benincasa hispida]	[more]
KAA0039772.1	3.8e-146	88.96	RNA-binding KH domain-containing protein PEPPER-like [Cucumis melo var. makuwa] ...	[more]
XP_008459768.1	3.8e-146	88.96	PREDICTED: RNA-binding KH domain-containing protein PEPPER-like [Cucumis melo]	[more]
XP_011656837.1	5.0e-146	88.65	RNA-binding KH domain-containing protein PEPPER [Cucumis sativus] >KGN46494.1 hy...	[more]

BLAST of HG10010618 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZH4	1.7e-16	31.98	RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SR13	2.3e-16	34.30	Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV...	[more]
F4KDN0	3.6e-14	32.75	KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 S...	[more]
P58223	8.3e-11	31.35	KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18...	[more]
P57722	1.6e-09	28.64	Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3	[more]

BLAST of HG10010618 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E5GCN1	7.0e-154	98.01	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A5A7T8H9	1.9e-146	88.96	RNA-binding KH domain-containing protein PEPPER-like OS=Cucumis melo var. makuwa...	[more]
A0A1S3CB11	1.9e-146	88.96	RNA-binding KH domain-containing protein PEPPER-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0KCF8	2.4e-146	88.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G103530 PE=4 SV=1	[more]
A0A6J1H4F3	3.0e-144	87.42	flowering locus K homology domain-like OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]

BLAST of HG10010618 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15270.2	7.7e-20	32.14	RNA-binding KH domain-containing protein	[more]
AT5G15270.1	7.7e-20	32.14	RNA-binding KH domain-containing protein	[more]
AT1G14170.2	7.2e-18	28.46	RNA-binding KH domain-containing protein	[more]
AT4G26000.1	1.2e-17	31.98	RNA-binding KH domain-containing protein	[more]
AT3G04610.1	1.6e-17	34.30	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 67..142 e-value: 7.8E-9 score: 45.4 coord: 244..301 e-value: 4.1 score: 10.3 coord: 160..237 e-value: 3.8E-9 score: 46.4
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 240..302 e-value: 5.6E-10 score: 40.8
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 160..239 e-value: 2.0E-16 score: 61.5
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 67..145 e-value: 2.4E-14 score: 54.8
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 244..301
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 156..238
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 66..137
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 163..232 e-value: 2.7E-12 score: 46.3 coord: 72..135 e-value: 1.5E-10 score: 40.7 coord: 247..301 e-value: 3.8E-7 score: 29.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..61
None	No IPR available	PANTHER	PTHR10288:SF265	POLY(RC)-BINDING PROTEIN 4-LIKE	coord: 242..301 coord: 32..239
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 242..301
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 32..239
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 245..302 score: 11.699136
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 68..134 score: 14.969395
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 161..232 score: 14.843616
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 71..121 e-value: 5.35434E-12 score: 58.2567
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 163..232 e-value: 7.98905E-17 score: 71.3535

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10010618.1	HG10010618.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding