HG10010486 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACTGAAGCTTGAGAACATCGATAGCTTTTCAAATGCAATTTTCCCACTCATACGATACCATGACACAGCCGATTTGAAATACTCACCAACAATGTTCTCTTTAATAATCTCTAGTCATTTCCCTTATATCATTACATCTCTCCAAATTATGCCTCCTTTCTTCAACCATTTTCTTTGCATTAACCAACAAATTTACCAATGCCGAATTTCTATCAGACGCTTCTATGATACCATGATCGCTATGAAACACGCCTTTTATTCTTCGATGACACTCTCGCTCGAACAACCCTTCAATCACATCTCCCTTCAATTTCACAATTCAAGTAAGTAACTTTTGCTACTATTCACTCAAAGAATTTCATTCAATTCTTGTCAAGAAAACAAGAATATTATTATTGTTTCTTGCAAATTCTTTTAACTAGACTTTCATTTTTATTTTTTGCCATTTATAATTTTTAGGGATTGATCAACAACTCGTTCGTGAATTGTCATTGAAACCTTCAAGAGAGGAAGATGTAGGCAAAATTGACTATGGAATCTTTGTCTCAATTGATTCACAAGTGTTCAAACGCATTGCAACAGAGTTAGATGATTTCAATGGTGATAAATATATATATATAATAATTCAAATAATCAATATTTTTAATTAAGTTTCTAAAAATCTTGTGGTAATTTGTCTCAGCATTGGTTACTCTAACAAATTCACATGTCAAATTCACTGTTCAAAGTAGAGAGATAAGTCTTCACAAAGAGGTATAATATGGTATTTATACTTGTGGTAATAGGCTTTTATTGCTGTCTATCGCGGTCTATTGTTAATAGACAGTAAAAAAATTTTATATTTATAAATAGTTTGGCTCATTTTTCTATATTTGAAAACAATTCATAATGTTTTGTGCAGAGAAACGAATGCATAATTGGAGGGGTAGCAAAGGAAGAAGAAGCTCGATTCTTTGTGTACTTAAATCCCATAATTTTTTTTCGTGATTTGGCAAATCAGACAAAAAGGATATGGATATTCAAGTCTCCTGATTCGTTTAGTATAATTGTTGCTCCTATTGGTTTGTATGCTCAATTTTGTGTCTATTTTTCCCATAGAGGGAAATTTCAAGAGACAAAAATATAATGTTTAGAATATGTTGATATCAATTTTTTTTCTCACAATAAAATTGAAATATGAACTATAGTGAATAGACAACCCTCTATATAGAATTTTGTCGACTATATTCTAATATTAATTAATTATAGTGAATGAACATCCGAGTCAATGAGGTATATAGAAAGTAAGCTTTTGCTAATGAGAGAGTTAAAAAAAAAACAACAAATTGTTTTTAAATATAGAAAACGAGTCAAATTATTTATAAATATAAAAAAAATTTACTGAGATATACTAAATTAATTAACATTTTTTATTTTATATTATTTTATATTGAAGTGTTGTATTAGGTTCGCTTAAATTATACTTTAGTTTAGTTATTTAGCTTTTACTGGTTTTTTTTTTCACTAAAAGTCCAATTTCTTGTATCGTTATTCCTTACCACAATTTTTTTTAAAAAATAAGATCATATATACATATATATTAATTGCACATAATACCTATATAATACAACATTTTAAATAGGAAAATTTTTACAGATGAAAAAAATGTCAAACTATTTATAGAAAATAGCAAAAAAAAATACTGATAGACATTGATAGACTTCTATCAGCATCTATCAGTGATAGACTTCTATAATTTCTATCACTGGTAGACCCTGATAGATTTCTATCAGCGTCTATCACAACTATCTAAAAATTTTGCTATTTTGTGTAAATAGTTTCCCTTATTTTTCTATTTTTTAAAATTTCTCTCTTAAATAATTATTTAAAAATATAAATTATCAACAAAAAAAGATTATATGCAAATTCTAAGAGCATGTCTATTTTGTTATTATGGATAATCACAAAAATTTAGCATTATTTACCAAACAATATAACCTACTTTTTCATGTTTTAAGCTGGAATTTATCAAACAATAATTTACTTCATTTTACTGTTAATTTTTCTAAACGTATATTTATTTGCCATCAATTATTTTAAAAGCTACAATAATATGAAACTAAACCTAAATCTAAAAGTTGATATCCATCCACCTTTGTCCGATGAATAAATTTATAAAATGATTATAGATAGATTAGTAAATAAATTTTTTAATCAAACAACACAGATAGTTAAGATTCTTTCATATTTACTTTTTACACATGAAAACATAATTCTAAACGGGGCCTAAAACCACTCCAATAGTTGGAAATTGGAATAGAAATTAAATGAGAAACAAAGGAAATTGGTAGAAACAAACATATTTTTGTCGATAATCCTTAAATTAGAATGATTTAGAAATTAAAATTATCTGTTTCTGACTAATGGAGTGTTCAATAAAAGGTAAAAAAATCTTACTTCGATTATTGTGTTTTTACCAATTTAGTTTCAATCCCTTAACTAAAATTACTATCAAAATTAAAGTAATATTTGTCTAAAAATAGGGAGATGTAAATTTAAACTATAGATTTTTAAGAGTATAAGGGTAACTATGAAACAAAGAGAAAAATTGGAATTAAAAAAATATATTATTATCAAAGTTTGTGTCCGATTAAATATTATCCTCTTTCAGGCGCACATTATTAGATTCCTTAGACATGGGAAGGGGTCATCTTATTATAAATAACAAAGGATTTTGGCCTGCCAAATTAAGGATCTCTTAAGTTATTTTAAGAATACATCTCTAGAAACCAAAATCAAACTTGTTATCAAGCGGAGGTGTTTCTGGAGATGTTGCTGGATTTGGGCCAGTTGAAACAAGTCGCTTGGTGTCCGCAGATAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGGACAAGCCTCTTGGTGCCCAAAGATAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACGAGTCGCTTTGTGCCTAAAGTCAATGGAGGACTTTCCGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGTCGCTTTGTGCCTAAAATTAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACGAGTCGCTTTGTGCCTAAAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACAAGCCACTTTGTGCCTAAAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATTAGGGCCAGTTGGGACAAGTCTCTTCGTGCCCAAAGATAATGGAGGGCTTTCAGGAGATGTTGCTAGATTTGGGCCGGTTGGAACAAGTCGCTTGGTGCCCACAGATAATGGAGGACTTTCAGGAGATATTGCTGGATTTGGGCCGGTTGGAACGAGCCGCTTTGTGCCTAAAGTCAATGGAGGACTTTCAGGTGATGTTGCTGGATTAGGGCCAGTTGGGACAAGGCTCTTGGTACCCAAAGATAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGTCGCTTGGTGCCCACAGATAATGGAGGGCTTTCAGGAGATGTTGCTGGATTAGGGCCAGTTGGGACAAGTCTCTTGGTACCCAAAGATAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGTCGCTTGGTGGCCACAGATAATGGAGGGCTTTCAGGAGATGTTGCTGGATTGGGTCCAGTTGGTGGTATAGTTCTTTTGAGACCTAAGGAAAGCTCATCACCCCTTCCATCCCTCTTTGCCTCCACACTATTTAGATTTGACGGCACAAGAACCAAAGAAAGGAACAAGAATGCATGA ATGGAACTGAAGCTTGAGAACATCGATAGCTTTTCAAATGCAATTTTCCCACTCATACGATACCATGACACAGCCGATTTGAAATACTCACCAACAATGTTCTCTTTAATAATCTCTAGTCATTTCCCTTATATCATTACATCTCTCCAAATTATGCCTCCTTTCTTCAACCATTTTCTTTGCATTAACCAACAAATTTACCAATGCCGAATTTCTATCAGACGCTTCTATGATACCATGATCGCTATGAAACACGCCTTTTATTCTTCGATGACACTCTCGCTCGAACAACCCTTCAATCACATCTCCCTTCAATTTCACAATTCAAGGATTGATCAACAACTCGTTCGTGAATTGTCATTGAAACCTTCAAGAGAGGAAGATAAACCAAAATCAAACTTGTTATCAAGCGGAGGTGTTTCTGGAGATGTTGCTGGATTTGGGCCAGTTGAAACAAGTCGCTTGGTGTCCGCAGATAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGGACAAGCCTCTTGGTGCCCAAAGATAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACGAGTCGCTTTGTGCCTAAAGTCAATGGAGGACTTTCCGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGTCGCTTTGTGCCTAAAATTAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACGAGTCGCTTTGTGCCTAAAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACAAGCCACTTTGTGCCTAAAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATTAGGGCCAGTTGGGACAAGTCTCTTCGTGCCCAAAGATAATGGAGGGCTTTCAGGAGATGTTGCTAGATTTGGGCCGGTTGGAACAAGTCGCTTGGTGCCCACAGATAATGGAGGACTTTCAGGAGATATTGCTGGATTTGGGCCGGTTGGAACGAGCCGCTTTGTGCCTAAAGTCAATGGAGGACTTTCAGGTGATGTTGCTGGATTAGGGCCAGTTGGGACAAGGCTCTTGGTACCCAAAGATAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGTCGCTTGGTGCCCACAGATAATGGAGGGCTTTCAGGAGATGTTGCTGGATTAGGGCCAGTTGGGACAAGTCTCTTGGTACCCAAAGATAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGTCGCTTGGTGGCCACAGATAATGGAGGGCTTTCAGGAGATGTTGCTGGATTGGGTCCAGTTGGTGGTATAGTTCTTTTGAGACCTAAGGAAAGCTCATCACCCCTTCCATCCCTCTTTGCCTCCACACTATTTAGATTTGACGGCACAAGAACCAAAGAAAGGAACAAGAATGCATGA ATGGAACTGAAGCTTGAGAACATCGATAGCTTTTCAAATGCAATTTTCCCACTCATACGATACCATGACACAGCCGATTTGAAATACTCACCAACAATGTTCTCTTTAATAATCTCTAGTCATTTCCCTTATATCATTACATCTCTCCAAATTATGCCTCCTTTCTTCAACCATTTTCTTTGCATTAACCAACAAATTTACCAATGCCGAATTTCTATCAGACGCTTCTATGATACCATGATCGCTATGAAACACGCCTTTTATTCTTCGATGACACTCTCGCTCGAACAACCCTTCAATCACATCTCCCTTCAATTTCACAATTCAAGGATTGATCAACAACTCGTTCGTGAATTGTCATTGAAACCTTCAAGAGAGGAAGATAAACCAAAATCAAACTTGTTATCAAGCGGAGGTGTTTCTGGAGATGTTGCTGGATTTGGGCCAGTTGAAACAAGTCGCTTGGTGTCCGCAGATAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGGACAAGCCTCTTGGTGCCCAAAGATAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACGAGTCGCTTTGTGCCTAAAGTCAATGGAGGACTTTCCGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGTCGCTTTGTGCCTAAAATTAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACGAGTCGCTTTGTGCCTAAAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACAAGCCACTTTGTGCCTAAAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATTAGGGCCAGTTGGGACAAGTCTCTTCGTGCCCAAAGATAATGGAGGGCTTTCAGGAGATGTTGCTAGATTTGGGCCGGTTGGAACAAGTCGCTTGGTGCCCACAGATAATGGAGGACTTTCAGGAGATATTGCTGGATTTGGGCCGGTTGGAACGAGCCGCTTTGTGCCTAAAGTCAATGGAGGACTTTCAGGTGATGTTGCTGGATTAGGGCCAGTTGGGACAAGGCTCTTGGTACCCAAAGATAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGTCGCTTGGTGCCCACAGATAATGGAGGGCTTTCAGGAGATGTTGCTGGATTAGGGCCAGTTGGGACAAGTCTCTTGGTACCCAAAGATAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGTCGCTTGGTGGCCACAGATAATGGAGGGCTTTCAGGAGATGTTGCTGGATTGGGTCCAGTTGGTGGTATAGTTCTTTTGAGACCTAAGGAAAGCTCATCACCCCTTCCATCCCTCTTTGCCTCCACACTATTTAGATTTGACGGCACAAGAACCAAAGAAAGGAACAAGAATGCATGA MELKLENIDSFSNAIFPLIRYHDTADLKYSPTMFSLIISSHFPYIITSLQIMPPFFNHFLCINQQIYQCRISIRRFYDTMIAMKHAFYSSMTLSLEQPFNHISLQFHNSRIDQQLVRELSLKPSREEDKPKSNLLSSGGVSGDVAGFGPVETSRLVSADNGGLSGDVAGFGPVGTSLLVPKDNGGLSGDVAGFGPVGTSRFVPKVNGGLSGDVAGFGPVGTSRFVPKINGGLSGDVAGFGPVGTSRFVPKVNGGLSGDVAGFGPVGTSHFVPKVNGGLSGDVAGLGPVGTSLFVPKDNGGLSGDVARFGPVGTSRLVPTDNGGLSGDIAGFGPVGTSRFVPKVNGGLSGDVAGLGPVGTRLLVPKDNGGLSGDVAGFGPVGTSRLVPTDNGGLSGDVAGLGPVGTSLLVPKDNGGLSGDVAGFGPVGTSRLVATDNGGLSGDVAGLGPVGGIVLLRPKESSSPLPSLFASTLFRFDGTRTKERNKNA Homology
BLAST of HG10010486 vs. NCBI nr
Match: XP_023536219.1 (collagen alpha-2(I) chain-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 485.0 bits (1247), Expect = 7.8e-133 Identity = 256/360 (71.11%), Postives = 280/360 (77.78%), Query Frame = 0
BLAST of HG10010486 vs. NCBI nr
Match: XP_038902390.1 (spidroin-1-like [Benincasa hispida]) HSP 1 Score: 334.0 bits (855), Expect = 2.2e-87 Identity = 190/269 (70.63%), Postives = 196/269 (72.86%), Query Frame = 0
BLAST of HG10010486 vs. NCBI nr
Match: KAF3551098.1 (hypothetical protein DY000_02005191 [Brassica cretica]) HSP 1 Score: 208.0 bits (528), Expect = 1.8e-49 Identity = 149/352 (42.33%), Postives = 205/352 (58.24%), Query Frame = 0
BLAST of HG10010486 vs. NCBI nr
Match: XP_024199882.1 (collagen alpha-2(I) chain-like [Rosa chinensis]) HSP 1 Score: 195.3 bits (495), Expect = 1.2e-45 Identity = 150/351 (42.74%), Postives = 177/351 (50.43%), Query Frame = 0
BLAST of HG10010486 vs. NCBI nr
Match: XP_008458677.1 (PREDICTED: uncharacterized protein LOC103498005 [Cucumis melo]) HSP 1 Score: 146.4 bits (368), Expect = 6.6e-31 Identity = 85/133 (63.91%), Postives = 98/133 (73.68%), Query Frame = 0
BLAST of HG10010486 vs. ExPASy TrEMBL
Match: A0A1S3C8E9 (uncharacterized protein LOC103498005 OS=Cucumis melo OX=3656 GN=LOC103498005 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 3.2e-31 Identity = 85/133 (63.91%), Postives = 98/133 (73.68%), Query Frame = 0
BLAST of HG10010486 vs. ExPASy TrEMBL
Match: A0A6D2JGR3 (Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS23799 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 3.4e-25 Identity = 123/313 (39.30%), Postives = 150/313 (47.92%), Query Frame = 0
BLAST of HG10010486 vs. ExPASy TrEMBL
Match: A0A140QVL5 (Putative outer membrane protein A (Fragment) OS=Acinetobacter sp. 216872 OX=1310734 GN=J633_1754 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 3.9e-21 Identity = 101/271 (37.27%), Postives = 141/271 (52.03%), Query Frame = 0
BLAST of HG10010486 vs. ExPASy TrEMBL
Match: A0A178VJC8 (Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=AXX17_At3g20940 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 2.5e-20 Identity = 73/153 (47.71%), Postives = 96/153 (62.75%), Query Frame = 0
BLAST of HG10010486 vs. ExPASy TrEMBL
Match: A0A7H2NMM7 (Uncharacterized protein OS=Acinetobacter seifertii OX=1530123 GN=IC799_02340 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.4e-18 Identity = 118/355 (33.24%), Postives = 163/355 (45.92%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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