HG10010486 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10010486
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionOuter membrane protein A (190 kDa antigen)
LocationChr06: 22601592 .. 22605441 (+)
RNA-Seq ExpressionHG10010486
SyntenyHG10010486
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACTGAAGCTTGAGAACATCGATAGCTTTTCAAATGCAATTTTCCCACTCATACGATACCATGACACAGCCGATTTGAAATACTCACCAACAATGTTCTCTTTAATAATCTCTAGTCATTTCCCTTATATCATTACATCTCTCCAAATTATGCCTCCTTTCTTCAACCATTTTCTTTGCATTAACCAACAAATTTACCAATGCCGAATTTCTATCAGACGCTTCTATGATACCATGATCGCTATGAAACACGCCTTTTATTCTTCGATGACACTCTCGCTCGAACAACCCTTCAATCACATCTCCCTTCAATTTCACAATTCAAGTAAGTAACTTTTGCTACTATTCACTCAAAGAATTTCATTCAATTCTTGTCAAGAAAACAAGAATATTATTATTGTTTCTTGCAAATTCTTTTAACTAGACTTTCATTTTTATTTTTTGCCATTTATAATTTTTAGGGATTGATCAACAACTCGTTCGTGAATTGTCATTGAAACCTTCAAGAGAGGAAGATGTAGGCAAAATTGACTATGGAATCTTTGTCTCAATTGATTCACAAGTGTTCAAACGCATTGCAACAGAGTTAGATGATTTCAATGGTGATAAATATATATATATAATAATTCAAATAATCAATATTTTTAATTAAGTTTCTAAAAATCTTGTGGTAATTTGTCTCAGCATTGGTTACTCTAACAAATTCACATGTCAAATTCACTGTTCAAAGTAGAGAGATAAGTCTTCACAAAGAGGTATAATATGGTATTTATACTTGTGGTAATAGGCTTTTATTGCTGTCTATCGCGGTCTATTGTTAATAGACAGTAAAAAAATTTTATATTTATAAATAGTTTGGCTCATTTTTCTATATTTGAAAACAATTCATAATGTTTTGTGCAGAGAAACGAATGCATAATTGGAGGGGTAGCAAAGGAAGAAGAAGCTCGATTCTTTGTGTACTTAAATCCCATAATTTTTTTTCGTGATTTGGCAAATCAGACAAAAAGGATATGGATATTCAAGTCTCCTGATTCGTTTAGTATAATTGTTGCTCCTATTGGTTTGTATGCTCAATTTTGTGTCTATTTTTCCCATAGAGGGAAATTTCAAGAGACAAAAATATAATGTTTAGAATATGTTGATATCAATTTTTTTTCTCACAATAAAATTGAAATATGAACTATAGTGAATAGACAACCCTCTATATAGAATTTTGTCGACTATATTCTAATATTAATTAATTATAGTGAATGAACATCCGAGTCAATGAGGTATATAGAAAGTAAGCTTTTGCTAATGAGAGAGTTAAAAAAAAAACAACAAATTGTTTTTAAATATAGAAAACGAGTCAAATTATTTATAAATATAAAAAAAATTTACTGAGATATACTAAATTAATTAACATTTTTTATTTTATATTATTTTATATTGAAGTGTTGTATTAGGTTCGCTTAAATTATACTTTAGTTTAGTTATTTAGCTTTTACTGGTTTTTTTTTTCACTAAAAGTCCAATTTCTTGTATCGTTATTCCTTACCACAATTTTTTTTAAAAAATAAGATCATATATACATATATATTAATTGCACATAATACCTATATAATACAACATTTTAAATAGGAAAATTTTTACAGATGAAAAAAATGTCAAACTATTTATAGAAAATAGCAAAAAAAAATACTGATAGACATTGATAGACTTCTATCAGCATCTATCAGTGATAGACTTCTATAATTTCTATCACTGGTAGACCCTGATAGATTTCTATCAGCGTCTATCACAACTATCTAAAAATTTTGCTATTTTGTGTAAATAGTTTCCCTTATTTTTCTATTTTTTAAAATTTCTCTCTTAAATAATTATTTAAAAATATAAATTATCAACAAAAAAAGATTATATGCAAATTCTAAGAGCATGTCTATTTTGTTATTATGGATAATCACAAAAATTTAGCATTATTTACCAAACAATATAACCTACTTTTTCATGTTTTAAGCTGGAATTTATCAAACAATAATTTACTTCATTTTACTGTTAATTTTTCTAAACGTATATTTATTTGCCATCAATTATTTTAAAAGCTACAATAATATGAAACTAAACCTAAATCTAAAAGTTGATATCCATCCACCTTTGTCCGATGAATAAATTTATAAAATGATTATAGATAGATTAGTAAATAAATTTTTTAATCAAACAACACAGATAGTTAAGATTCTTTCATATTTACTTTTTACACATGAAAACATAATTCTAAACGGGGCCTAAAACCACTCCAATAGTTGGAAATTGGAATAGAAATTAAATGAGAAACAAAGGAAATTGGTAGAAACAAACATATTTTTGTCGATAATCCTTAAATTAGAATGATTTAGAAATTAAAATTATCTGTTTCTGACTAATGGAGTGTTCAATAAAAGGTAAAAAAATCTTACTTCGATTATTGTGTTTTTACCAATTTAGTTTCAATCCCTTAACTAAAATTACTATCAAAATTAAAGTAATATTTGTCTAAAAATAGGGAGATGTAAATTTAAACTATAGATTTTTAAGAGTATAAGGGTAACTATGAAACAAAGAGAAAAATTGGAATTAAAAAAATATATTATTATCAAAGTTTGTGTCCGATTAAATATTATCCTCTTTCAGGCGCACATTATTAGATTCCTTAGACATGGGAAGGGGTCATCTTATTATAAATAACAAAGGATTTTGGCCTGCCAAATTAAGGATCTCTTAAGTTATTTTAAGAATACATCTCTAGAAACCAAAATCAAACTTGTTATCAAGCGGAGGTGTTTCTGGAGATGTTGCTGGATTTGGGCCAGTTGAAACAAGTCGCTTGGTGTCCGCAGATAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGGACAAGCCTCTTGGTGCCCAAAGATAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACGAGTCGCTTTGTGCCTAAAGTCAATGGAGGACTTTCCGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGTCGCTTTGTGCCTAAAATTAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACGAGTCGCTTTGTGCCTAAAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACAAGCCACTTTGTGCCTAAAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATTAGGGCCAGTTGGGACAAGTCTCTTCGTGCCCAAAGATAATGGAGGGCTTTCAGGAGATGTTGCTAGATTTGGGCCGGTTGGAACAAGTCGCTTGGTGCCCACAGATAATGGAGGACTTTCAGGAGATATTGCTGGATTTGGGCCGGTTGGAACGAGCCGCTTTGTGCCTAAAGTCAATGGAGGACTTTCAGGTGATGTTGCTGGATTAGGGCCAGTTGGGACAAGGCTCTTGGTACCCAAAGATAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGTCGCTTGGTGCCCACAGATAATGGAGGGCTTTCAGGAGATGTTGCTGGATTAGGGCCAGTTGGGACAAGTCTCTTGGTACCCAAAGATAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGTCGCTTGGTGGCCACAGATAATGGAGGGCTTTCAGGAGATGTTGCTGGATTGGGTCCAGTTGGTGGTATAGTTCTTTTGAGACCTAAGGAAAGCTCATCACCCCTTCCATCCCTCTTTGCCTCCACACTATTTAGATTTGACGGCACAAGAACCAAAGAAAGGAACAAGAATGCATGA

mRNA sequence

ATGGAACTGAAGCTTGAGAACATCGATAGCTTTTCAAATGCAATTTTCCCACTCATACGATACCATGACACAGCCGATTTGAAATACTCACCAACAATGTTCTCTTTAATAATCTCTAGTCATTTCCCTTATATCATTACATCTCTCCAAATTATGCCTCCTTTCTTCAACCATTTTCTTTGCATTAACCAACAAATTTACCAATGCCGAATTTCTATCAGACGCTTCTATGATACCATGATCGCTATGAAACACGCCTTTTATTCTTCGATGACACTCTCGCTCGAACAACCCTTCAATCACATCTCCCTTCAATTTCACAATTCAAGGATTGATCAACAACTCGTTCGTGAATTGTCATTGAAACCTTCAAGAGAGGAAGATAAACCAAAATCAAACTTGTTATCAAGCGGAGGTGTTTCTGGAGATGTTGCTGGATTTGGGCCAGTTGAAACAAGTCGCTTGGTGTCCGCAGATAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGGACAAGCCTCTTGGTGCCCAAAGATAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACGAGTCGCTTTGTGCCTAAAGTCAATGGAGGACTTTCCGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGTCGCTTTGTGCCTAAAATTAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACGAGTCGCTTTGTGCCTAAAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACAAGCCACTTTGTGCCTAAAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATTAGGGCCAGTTGGGACAAGTCTCTTCGTGCCCAAAGATAATGGAGGGCTTTCAGGAGATGTTGCTAGATTTGGGCCGGTTGGAACAAGTCGCTTGGTGCCCACAGATAATGGAGGACTTTCAGGAGATATTGCTGGATTTGGGCCGGTTGGAACGAGCCGCTTTGTGCCTAAAGTCAATGGAGGACTTTCAGGTGATGTTGCTGGATTAGGGCCAGTTGGGACAAGGCTCTTGGTACCCAAAGATAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGTCGCTTGGTGCCCACAGATAATGGAGGGCTTTCAGGAGATGTTGCTGGATTAGGGCCAGTTGGGACAAGTCTCTTGGTACCCAAAGATAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGTCGCTTGGTGGCCACAGATAATGGAGGGCTTTCAGGAGATGTTGCTGGATTGGGTCCAGTTGGTGGTATAGTTCTTTTGAGACCTAAGGAAAGCTCATCACCCCTTCCATCCCTCTTTGCCTCCACACTATTTAGATTTGACGGCACAAGAACCAAAGAAAGGAACAAGAATGCATGA

Coding sequence (CDS)

ATGGAACTGAAGCTTGAGAACATCGATAGCTTTTCAAATGCAATTTTCCCACTCATACGATACCATGACACAGCCGATTTGAAATACTCACCAACAATGTTCTCTTTAATAATCTCTAGTCATTTCCCTTATATCATTACATCTCTCCAAATTATGCCTCCTTTCTTCAACCATTTTCTTTGCATTAACCAACAAATTTACCAATGCCGAATTTCTATCAGACGCTTCTATGATACCATGATCGCTATGAAACACGCCTTTTATTCTTCGATGACACTCTCGCTCGAACAACCCTTCAATCACATCTCCCTTCAATTTCACAATTCAAGGATTGATCAACAACTCGTTCGTGAATTGTCATTGAAACCTTCAAGAGAGGAAGATAAACCAAAATCAAACTTGTTATCAAGCGGAGGTGTTTCTGGAGATGTTGCTGGATTTGGGCCAGTTGAAACAAGTCGCTTGGTGTCCGCAGATAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGGACAAGCCTCTTGGTGCCCAAAGATAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACGAGTCGCTTTGTGCCTAAAGTCAATGGAGGACTTTCCGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGTCGCTTTGTGCCTAAAATTAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACGAGTCGCTTTGTGCCTAAAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACAAGCCACTTTGTGCCTAAAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATTAGGGCCAGTTGGGACAAGTCTCTTCGTGCCCAAAGATAATGGAGGGCTTTCAGGAGATGTTGCTAGATTTGGGCCGGTTGGAACAAGTCGCTTGGTGCCCACAGATAATGGAGGACTTTCAGGAGATATTGCTGGATTTGGGCCGGTTGGAACGAGCCGCTTTGTGCCTAAAGTCAATGGAGGACTTTCAGGTGATGTTGCTGGATTAGGGCCAGTTGGGACAAGGCTCTTGGTACCCAAAGATAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGTCGCTTGGTGCCCACAGATAATGGAGGGCTTTCAGGAGATGTTGCTGGATTAGGGCCAGTTGGGACAAGTCTCTTGGTACCCAAAGATAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGTCGCTTGGTGGCCACAGATAATGGAGGGCTTTCAGGAGATGTTGCTGGATTGGGTCCAGTTGGTGGTATAGTTCTTTTGAGACCTAAGGAAAGCTCATCACCCCTTCCATCCCTCTTTGCCTCCACACTATTTAGATTTGACGGCACAAGAACCAAAGAAAGGAACAAGAATGCATGA

Protein sequence

MELKLENIDSFSNAIFPLIRYHDTADLKYSPTMFSLIISSHFPYIITSLQIMPPFFNHFLCINQQIYQCRISIRRFYDTMIAMKHAFYSSMTLSLEQPFNHISLQFHNSRIDQQLVRELSLKPSREEDKPKSNLLSSGGVSGDVAGFGPVETSRLVSADNGGLSGDVAGFGPVGTSLLVPKDNGGLSGDVAGFGPVGTSRFVPKVNGGLSGDVAGFGPVGTSRFVPKINGGLSGDVAGFGPVGTSRFVPKVNGGLSGDVAGFGPVGTSHFVPKVNGGLSGDVAGLGPVGTSLFVPKDNGGLSGDVARFGPVGTSRLVPTDNGGLSGDIAGFGPVGTSRFVPKVNGGLSGDVAGLGPVGTRLLVPKDNGGLSGDVAGFGPVGTSRLVPTDNGGLSGDVAGLGPVGTSLLVPKDNGGLSGDVAGFGPVGTSRLVATDNGGLSGDVAGLGPVGGIVLLRPKESSSPLPSLFASTLFRFDGTRTKERNKNA
Homology
BLAST of HG10010486 vs. NCBI nr
Match: XP_023536219.1 (collagen alpha-2(I) chain-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 485.0 bits (1247), Expect = 7.8e-133
Identity = 256/360 (71.11%), Postives = 280/360 (77.78%), Query Frame = 0

Query: 137 SGGVSGDVAGFGPVETSRLVSADNGGLSGDVAGFGPVGTSLLVPKDNGGLSGDVAGFGPV 196
           +GGVSGDVAGFGPV T   ++  NGG+SGDVAGFGPVGT LLVPK  GGLSGDVAGFGPV
Sbjct: 97  NGGVSGDVAGFGPVGTRLFMTRPNGGVSGDVAGFGPVGTRLLVPKLEGGLSGDVAGFGPV 156

Query: 197 GTSRFVPKVNGGLSGDVAGFGPVGTSRFVPKINGGLSGDVAGFGPVGTSRFVPKVNGGLS 256
           GT   VP+ NGG+SGDVAGFGPVGT  FVP+ NGG+SGDVAGFGPVGT   VP+ NGG+S
Sbjct: 157 GTRLLVPRPNGGISGDVAGFGPVGTRLFVPRPNGGVSGDVAGFGPVGTRLLVPRPNGGIS 216

Query: 257 ---------GDVAGFGPVGTSHFVPKVNGGLSGDVAGLGPVGTSLFVPKDNGGLSGDVAR 316
                    GDVAGFGPVGT  FVP+ NGG+SGDVAG GPVGT LF+P+ NGG+SGDVA 
Sbjct: 217 GDVAGFGPVGDVAGFGPVGTRLFVPRHNGGVSGDVAGFGPVGTRLFMPRPNGGVSGDVAG 276

Query: 317 FGPVGTSRLVPTDNGGLSGDIAGFGPVGTSRFVPKVNGGLSGDVAGLGPVGTRLLVPKDN 376
           FGPVGT   VP  NGG+SGD+AGFGPVGT  FVP+ NGG+SGDVAG GPVGTRLLVPK  
Sbjct: 277 FGPVGTRLFVPRPNGGVSGDVAGFGPVGTRLFVPRPNGGVSGDVAGFGPVGTRLLVPKLE 336

Query: 377 GGLSGDVAGFGPVGTSRLVPTDNGGLSGDVAGLGPVGTSLLVPKDNGGLSGDVAGFGPVG 436
           GGLSGDV GFGPVGT  LVP  NGG+SGDVAG GPVGT L VP+ NGG+SGDVAGFGPVG
Sbjct: 337 GGLSGDVVGFGPVGTRLLVPGRNGGVSGDVAGFGPVGTRLFVPRPNGGVSGDVAGFGPVG 396

Query: 437 TSRLVATDNGGLSGDVAGLGPVGGIVLLRPKESSSPLPSLFASTLFRFDGTRTKERNKNA 488
           T  LV   NGG+SGDVAG G V G  LLRPKES+ PL S FAS   R D     E NK A
Sbjct: 397 TRLLVPRPNGGISGDVAGFGIV-GTRLLRPKESTLPLSSHFASRPLRLDKIPITEINKKA 455

BLAST of HG10010486 vs. NCBI nr
Match: XP_038902390.1 (spidroin-1-like [Benincasa hispida])

HSP 1 Score: 334.0 bits (855), Expect = 2.2e-87
Identity = 190/269 (70.63%), Postives = 196/269 (72.86%), Query Frame = 0

Query: 159 DNGGLSGDVAGFGPVGTSLLVPKDNGGLSGDVAGFGPVGTSRFVPKVNGGLSGDVAGFGP 218
           DN  LS  V GFGPVG S LVPKDNG L  DV GFGP  T   V + N  LSGDVAGFGP
Sbjct: 2   DNRELSRYVTGFGPVGMSHLVPKDNGELLQDVTGFGPFRTRLLVSQNNRALSGDVAGFGP 61

Query: 219 VGTSRFVPKINGGLSGDVAGFGPVGTSRFVPKVNGGLSGDVAGFGPVGTSHFVPKVNGGL 278
            GTS  + K NGGLSG V G         + K NGGL GDV GFG  G S  VPK N   
Sbjct: 62  FGTS--LAKGNGGLSGYVTGL-----DFLMLKHNGGLVGDVTGFGSFGMSLLVPKDN--- 121

Query: 279 SGDVAGLGPVGTSLFVPKDNGGLSGDVARFGPVGTSRLVPTDNGGLSGDIAGFGPVGTSR 338
            GD AG GP GTS FVPK NGGLSGDVA FG VGTSR VP  NGGLSGD+ GFGPVGTS 
Sbjct: 122 EGDFAGFGPAGTSRFVPKFNGGLSGDVAGFGTVGTSRFVPKVNGGLSGDVVGFGPVGTSC 181

Query: 339 FVPKVNGGLSGDVAGLGPVGTRLLVPKDNGGLSGDVAGFGPVGTSRLVPTDNGGLSGDVA 398
           F+PKVNGGLSGDVAG GP+GT LLVPK NGGLSGDVAGFG VGTS  VP  NGGLSGDVA
Sbjct: 182 FMPKVNGGLSGDVAGFGPIGTSLLVPKVNGGLSGDVAGFGLVGTSHFVPKVNGGLSGDVA 241

Query: 399 GLGPVGTSLLVPKDNGGLSGDVAGFGPVG 428
           G GPVGTSLLV KDNG LSGDVAGFGPVG
Sbjct: 242 GFGPVGTSLLVLKDNGKLSGDVAGFGPVG 260

BLAST of HG10010486 vs. NCBI nr
Match: KAF3551098.1 (hypothetical protein DY000_02005191 [Brassica cretica])

HSP 1 Score: 208.0 bits (528), Expect = 1.8e-49
Identity = 149/352 (42.33%), Postives = 205/352 (58.24%), Query Frame = 0

Query: 135 LSSGGVSGDVAGFGPVETSRLV---SADNGGLSGDVAGFGPVGTSLLVPK---DNGGLSG 194
           +  GG  GDV+ FG + T+      + + GG  GDV+ FGP+GT+L  PK   + GG  G
Sbjct: 3   IECGGEGGDVSLFGLLGTNLFTPKFAMECGGEGGDVSLFGPLGTNLFTPKSAMECGGEGG 62

Query: 195 DVAGFGPVGTSRFVPKVN---GGLSGDVAGFGPVGTSRFVPK--INGGLSGDVAGFGPVG 254
           DV+ FGP+GT+ F PK     GG SG+V+ FGP+GT+ F PK  I  G  GDV+ FGP+G
Sbjct: 63  DVSLFGPLGTNLFTPKSAMECGGESGEVSLFGPLGTNLFTPKFAIECGEGGDVSLFGPLG 122

Query: 255 TSRFVPK-------VNGGLSGDVAGFGPVGTSHFVPKVN---GGLSGDVAGLGPVGTSLF 314
           T+ F PK          G  GDV+ FGP+GT+ F PK     GG  GDV+  GP+GT+LF
Sbjct: 123 TNLFSPKSAMECGGEECGEGGDVSLFGPLGTNLFSPKSAMECGGEGGDVSLFGPLGTNLF 182

Query: 315 VPK---DNGGLSGDVARFGPVGTSRLVPTDN---GGLSGDIAGFGPVGTSRFVPKVN--- 374
            PK   + G + GDV+ FGP+GT+   P      GG  GD++ FGP+GT+ F P  +   
Sbjct: 183 TPKSPMECGRVGGDVSLFGPLGTNLFTPKSAIKCGGEGGDVSLFGPLGTNLFTPISSMEC 242

Query: 375 GGLSGDVAGLGPVGTRLLVPK---DNGGLSGDVAGFGPVGTSRLVPTDN---GGLSGDVA 434
           GG  G+V+  G +GT L  PK   + GG  GDV+ FGP+GT+      +   GG  GDV+
Sbjct: 243 GGEGGEVSLFGLLGTNLFTPKSAMECGGEGGDVSLFGPLGTNLFTLVSSMKCGGEGGDVS 302

Query: 435 GLGPVGT---SLLVPKDNGGLSGDVAGFGPVGTSRLV---ATDNGGLSGDVA 445
            LGP+GT   +L+      G  GDV+ FGP+GT+  +   + + GG   +V+
Sbjct: 303 LLGPLGTNFFTLVSSMKCVGEGGDVSLFGPLGTNLFIPIFSIETGGEERNVS 354

BLAST of HG10010486 vs. NCBI nr
Match: XP_024199882.1 (collagen alpha-2(I) chain-like [Rosa chinensis])

HSP 1 Score: 195.3 bits (495), Expect = 1.2e-45
Identity = 150/351 (42.74%), Postives = 177/351 (50.43%), Query Frame = 0

Query: 135 LSSGGVSGDVAGFGPVETSRLVSADNGGLSGDVAGFGPVGTSLLVPKD-NGGLSGDVAGF 194
           +  GG  GD  G GPV T R V     G+ GD  G GP+GT    P+  NGG+ GD  G 
Sbjct: 48  IRDGGDPGDFIGLGPVGTRRDV-----GVLGDFVGLGPIGTR---PETFNGGVPGDFVGL 107

Query: 195 GPVGTSRFVPKV-------------NGGLSGDVAGFGPVGTSRFVPKINGGLSGDVAGFG 254
           GPVGT R    +             +GG+  D  G GPV T R     NGG+ GD+ G G
Sbjct: 108 GPVGTRRDGDALRDFVGFGLVSTCRDGGVPRDFVGLGPVCTLR-----NGGVLGDLVGLG 167

Query: 255 PVGTSRFVPKVNGGLSGDVAGFGPVGTSHFVPKVNGGLSGDVAGLGPVGTSL--FVPKD- 314
           PVGT R     NGG+ GD  G GPVGT     + NGG+ GD  G GPVGT     VP+D 
Sbjct: 168 PVGTRR-----NGGVPGDFVGLGPVGT-----RRNGGVPGDFVGFGPVGTRRDGDVPRDF 227

Query: 315 ----------NGGLSGDVARFGPVGTSRLVPTDNGGLSGDIAGFGPVGTSRFVPKVNGGL 374
                     +GG+ GD    GPVGT R     NGG+ GD+ G GPVGT R     NGG+
Sbjct: 228 VGFGLVGTCRDGGVPGDFVGLGPVGTRR-----NGGVPGDLVGLGPVGTRR-----NGGV 287

Query: 375 SGDVAGLGPVGTRLLV--------PKDNGGLSGDVAGFGPVGTSRLVPTDNGGLSGDVAG 434
            GD  G GPVG    V         + +GG+  D  G G VGT       +GG+SGD  G
Sbjct: 288 PGDFVGFGPVGGVPRVFEGLSPVRTRCDGGIPRDFVGLGLVGT-----RCDGGVSGDFVG 347

Query: 435 LGPVGTSLLVPKDNGGLSGDVAGFGPVGTSRLVATDNGGLSGDVAGLGPVG 451
            G VGT       N G+ GD  GFGP+GT R   T NGG+ GD    GPVG
Sbjct: 348 FGVVGT--CHETFNSGVPGDFVGFGPIGTRR--ETFNGGVPGDSVRFGPVG 356

BLAST of HG10010486 vs. NCBI nr
Match: XP_008458677.1 (PREDICTED: uncharacterized protein LOC103498005 [Cucumis melo])

HSP 1 Score: 146.4 bits (368), Expect = 6.6e-31
Identity = 85/133 (63.91%), Postives = 98/133 (73.68%), Query Frame = 0

Query: 1   MELKLENIDSFSNAIFPLIRYHDTADLKYSPTMFSLIISSHFPYIITSLQIMPPFFNHFL 60
           MELKLENI SFS A+ PL R++DTADLK SP MFSLIIS HFP IITSLQI+PPFF +FL
Sbjct: 1   MELKLENIHSFSKALLPLQRFNDTADLKCSPKMFSLIISRHFPLIITSLQILPPFFTNFL 60

Query: 61  CINQQIYQCRISIRRFYDTMIAMKHAFYSSMTLSL--EQPFNHISLQFHNSRI--DQQ-L 120
           C N QI+Q +I I+ FYD M +M H  YSSMTLSL  +QP   I+LQF N R+  DQ+ L
Sbjct: 61  CQN-QIFQFQIPIKSFYDIMNSMTHRLYSSMTLSLHPQQPLIQIALQFRNPRVVDDQEAL 120

Query: 121 VRELSLKPSREED 129
                L PSREED
Sbjct: 121 YHAFPLSPSREED 132

BLAST of HG10010486 vs. ExPASy TrEMBL
Match: A0A1S3C8E9 (uncharacterized protein LOC103498005 OS=Cucumis melo OX=3656 GN=LOC103498005 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.2e-31
Identity = 85/133 (63.91%), Postives = 98/133 (73.68%), Query Frame = 0

Query: 1   MELKLENIDSFSNAIFPLIRYHDTADLKYSPTMFSLIISSHFPYIITSLQIMPPFFNHFL 60
           MELKLENI SFS A+ PL R++DTADLK SP MFSLIIS HFP IITSLQI+PPFF +FL
Sbjct: 1   MELKLENIHSFSKALLPLQRFNDTADLKCSPKMFSLIISRHFPLIITSLQILPPFFTNFL 60

Query: 61  CINQQIYQCRISIRRFYDTMIAMKHAFYSSMTLSL--EQPFNHISLQFHNSRI--DQQ-L 120
           C N QI+Q +I I+ FYD M +M H  YSSMTLSL  +QP   I+LQF N R+  DQ+ L
Sbjct: 61  CQN-QIFQFQIPIKSFYDIMNSMTHRLYSSMTLSLHPQQPLIQIALQFRNPRVVDDQEAL 120

Query: 121 VRELSLKPSREED 129
                L PSREED
Sbjct: 121 YHAFPLSPSREED 132

BLAST of HG10010486 vs. ExPASy TrEMBL
Match: A0A6D2JGR3 (Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS23799 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.4e-25
Identity = 123/313 (39.30%), Postives = 150/313 (47.92%), Query Frame = 0

Query: 171 GPVGTSLLVPKDN-GGLSGDVAGFGPVGTSRFV---PKVNGGLSGDVAGFGPVGTSRFV- 230
           GPVGT    P    G L GDV+   PVGT  F       N  L GDV   GP+GT  F  
Sbjct: 11  GPVGTFRFAPSTKCGELGGDVSLLEPVGTILFASISAMKNDELGGDVLLLGPLGTFFFAS 70

Query: 231 --PKINGGLSGDVAGFGPVGTSRFV---PKVNGGLSGDVAGFGPVGTSHFVPKVN----G 290
                   L GDV   G +GT  F       N G+ GDV+  GPV T  F P ++     
Sbjct: 71  ISAMKKDELGGDVLLSGLLGTVLFTSIFAMKNDGIDGDVSLLGPVETFLF-PSISDMKKD 130

Query: 291 GLSGDVAGLGPVGTSLFV---PKDNGGLSGDVARFGPVGT---SRLVPTDNGGLSGDIAG 350
            L GDV   GP+GT LF       N GL GDV+  GPV T   + +       L GD+  
Sbjct: 131 ELGGDVLLSGPLGTVLFTSISAMKNDGLDGDVSLLGPVETFLFASISAMKKDELGGDVLL 190

Query: 351 FGPVGTSRFV---PKVNGGLSGDVAGLGPVGTRLL-----VPKDNGGLSGDVAGFGPVGT 410
            GP+GT  F+      N GL GDV+ LGPVGT L      + KD   L GDV   GP+GT
Sbjct: 191 SGPLGTVLFISISAMKNDGLDGDVSLLGPVGTFLFASISAMKKDE--LGGDVLLSGPLGT 250

Query: 411 SRLVPTD---NGGLSGDVAGLGPVGTSLL-----VPKDNGGLSGDVAGFGPVGT---SRL 445
              +      N GL GDV+ LG VGT L      + KD   L GDV   GP+GT   + +
Sbjct: 251 VLFISISAMKNDGLDGDVSLLGLVGTFLFPSISAMKKDK--LGGDVLLSGPLGTVLFTSI 310

BLAST of HG10010486 vs. ExPASy TrEMBL
Match: A0A140QVL5 (Putative outer membrane protein A (Fragment) OS=Acinetobacter sp. 216872 OX=1310734 GN=J633_1754 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.9e-21
Identity = 101/271 (37.27%), Postives = 141/271 (52.03%), Query Frame = 0

Query: 138 GGVSGDVAGFGPVETSRLVSADNGGLSGDVAGFGPVGTSLLVPKDNGGLSGDVAGFGPVG 197
           GG++G   G  P+ +   V+   GGL+G V G  P+GT   V    GGL+G   G  P+G
Sbjct: 59  GGLTGGATGGNPLGS---VTDIIGGLTGGVTGGNPLGT---VTDIIGGLTGGATGGNPLG 118

Query: 198 TSRFVPKVNGGLSGDVAGFGPVGTSRFVPKINGGLSGDVAGFGPVGTSRFVPKVNGGLSG 257
           T   V  + GGL+G V G  P+GT   V  I GGL+G   G  P+GT   V  + GGL+G
Sbjct: 119 T---VTDIIGGLTGGVTGGNPLGT---VTDIIGGLTGGATGGNPLGT---VTDIIGGLTG 178

Query: 258 DVAGFGPVGTSHFVPKVNGGLSGDVAGLGPVGTSLFVPKDNGGLSGDVARFGPVGTSRLV 317
            V G  P+GT   V  + GGL+G   G  P+GT   V    GGL+G V    P+GT   V
Sbjct: 179 GVTGGNPLGT---VTDIIGGLTGGATGGNPLGT---VTDIIGGLTGGVTGGNPLGT---V 238

Query: 318 PTDNGGLSGDIAGFGPVGTSRFVPKVNGGLSGDVAGLGPVGTRLLVPKDNGGLSGDVAGF 377
               GG++G + G  P+GT   V  + GGL+G V G  P+GT   V    GG++G + G 
Sbjct: 239 TDIIGGVTGGVTGGNPLGT---VTDIIGGLTGGVTGGNPLGT---VTDIIGGVTGGIIGG 298

Query: 378 GPVGTSRLVPTDNGGLSGDVAGLGPVGTSLL 409
           G    S ++     G+   + G+  + TS++
Sbjct: 299 GTSPISPVIDAVQSGID-VLQGVESLKTSII 298

BLAST of HG10010486 vs. ExPASy TrEMBL
Match: A0A178VJC8 (Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=AXX17_At3g20940 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.5e-20
Identity = 73/153 (47.71%), Postives = 96/153 (62.75%), Query Frame = 0

Query: 155 LVSADNGGLSGDVAGFGPVGTSLLVP---KDNGGLSGDVAGFGPVGTSRFVP---KVNGG 214
           + + +N G +GD+A FGP+GT+L VP    +N G +GD A FGP+GT+ FVP     N G
Sbjct: 5   IYALENDGEAGDIALFGPLGTNLFVPISFLENDGEAGDXALFGPLGTNLFVPISLLENDG 64

Query: 215 LSGDVAGFGPVGTSRFVP---KINGGLSGDVAGFGPVGTSRFVP---KVNGGLSGDVAGF 274
            +GDVA FGP+GT+ FVP     N G +GDVA FGP+GT+  +P     N G +GDVA F
Sbjct: 65  EAGDVALFGPLGTNLFVPISALENDGEAGDVALFGPLGTNLLIPISALENNGEAGDVALF 124

Query: 275 GPVGTSHFVP---KVNGGLSGDVAGLGPVGTSL 293
           GP+GT+ FVP     N    GD A L  +G +L
Sbjct: 125 GPLGTNLFVPISALENDEEDGDFASLTTLGPTL 157

BLAST of HG10010486 vs. ExPASy TrEMBL
Match: A0A7H2NMM7 (Uncharacterized protein OS=Acinetobacter seifertii OX=1530123 GN=IC799_02340 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.4e-18
Identity = 118/355 (33.24%), Postives = 163/355 (45.92%), Query Frame = 0

Query: 138 GGVSGDVAGFGPV--------ETSRLVSADNGGLSGDVAGFGPVG--TSLL------VPK 197
           GGV+G      PV          +  +    GGL+G V G  PVG  T++L      +  
Sbjct: 84  GGVTGGATSGNPVGAVTDILGGVTGTIGGLTGGLTGGVTGGNPVGAVTNILGGVTGTIGG 143

Query: 198 DNGGLSGDVAGFGPVGTSRFVPKVNGGLSGDVAGFGPVGTSRFVPKINGGLSGDVAGFGP 257
             GGL+G V G  PVGT   V  + GG++G + G            +  GL+G V G  P
Sbjct: 144 VTGGLTGGVTGGNPVGT---VTDILGGVTGTIGG------------LTSGLTGGVTGGNP 203

Query: 258 V--------GTSRFVPKVNGGLSGDVAGFGPVGTSHFVPKVNGGLSGDVAGLGPVGTSLF 317
           V        G +  +  + GGL+G V G  PVGT   V  + GG++G + GL        
Sbjct: 204 VGAVTNILGGVTGTIGGLTGGLTGGVTGGNPVGT---VTDILGGVTGTIGGL-------- 263

Query: 318 VPKDNGGLSGDVARFGPVG--TSRL--VPTDNGGLSGDIAG----FGPVGTSR----FVP 377
                GGL+G V    PVG  T+ L  V    GGL+G + G      PVG        V 
Sbjct: 264 ----TGGLTGGVTGGNPVGAVTNILGGVTGTIGGLTGGVTGGATSGNPVGAVTDILGGVT 323

Query: 378 KVNGGLSGDVAGLGPVGTRLLVPKDNGGLSGDVAGFGPVGTSRLVPTDNGGLSGDVAGLG 437
              GGL+G V G  P+GT   V +  GG++G   G  P+GT   V    GG++G  AG  
Sbjct: 324 GTIGGLTGGVTGGNPLGT---VTEIIGGVTGGATGGNPLGT---VTDIIGGVTGGAAGGN 383

Query: 438 PVG--TSLL--VPKDNGGLSGDVAGFGPVGTSRLVATDNGGLSGDVAGLGPVGGI 453
           P+G  T+++  V    GG++G   G  P+GT   V    GG++G  AG  P+G +
Sbjct: 384 PLGAVTNIIGGVTGAIGGVTGGATGGNPLGT---VTDIIGGVTGGAAGGNPLGAV 399

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023536219.17.8e-13371.11collagen alpha-2(I) chain-like [Cucurbita pepo subsp. pepo][more]
XP_038902390.12.2e-8770.63spidroin-1-like [Benincasa hispida][more]
KAF3551098.11.8e-4942.33hypothetical protein DY000_02005191 [Brassica cretica][more]
XP_024199882.11.2e-4542.74collagen alpha-2(I) chain-like [Rosa chinensis][more]
XP_008458677.16.6e-3163.91PREDICTED: uncharacterized protein LOC103498005 [Cucumis melo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3C8E93.2e-3163.91uncharacterized protein LOC103498005 OS=Cucumis melo OX=3656 GN=LOC103498005 PE=... [more]
A0A6D2JGR33.4e-2539.30Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS23799 ... [more]
A0A140QVL53.9e-2137.27Putative outer membrane protein A (Fragment) OS=Acinetobacter sp. 216872 OX=1310... [more]
A0A178VJC82.5e-2047.71Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=AXX17_At3g20940 PE=4 ... [more]
A0A7H2NMM71.4e-1833.24Uncharacterized protein OS=Acinetobacter seifertii OX=1530123 GN=IC799_02340 PE=... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10010486.1HG10010486.1mRNA