HG10010459 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10010459
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic
Location	Chr06: 22401847 .. 22404790 (-)
RNA-Seq Expression	HG10010459
Synteny	HG10010459

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAAGAAGCTAAGATGGGCAATGGACGGCCAAGGCTTCTGGGATCTCGATGTTTCAACGCCTAGAACACTCGATGGCTCTGCCTCTCCTGTTCCTTCTCATTTACACTTACTTCCTTTGGGATTATCCAGAGGTGTTCGTCTTTCCAGGGCAAAGCAGATTGATTTCATGCAGAGTTTCATGGCTGCTCCTTTTGTTCCTTCTTATTCCCCCTCCCATGGCTTCTCTCTCCAACGCGTCTTCTCCATCCCCTTTTCAGATTCTGGGTAACTCAATCCTTTCTTTTTTATCTTTGGGTTTTTCTCATTTCGTATGATTACATGTACATTGGTATTGATTCTCCATCAAATCTGCCTTAAAAGCACTGCAGCTCTGCTACTCTCTTAGGGCAGTTCAATTTGCAGAAATTCATCTCCTCTCTTAAGAAATCTGGTGTTGGAGACATGGGTCATCAGTCGCTTTCTTCATTTCTTCAATGCATTGGAAGGCATCTTTGCCATCGGTCTTTGTATGCCCTTGGTATCTCTTCTGATATCTTGTTACCACCTGATGATTCCCTGATGATTAGCTTCGATGGATATGGTGACAGTGAAGTTGTTCGAACAAAAGCAGTATTCCACCACAAGGCATGTATATCCCTGGCCCTTAGTAGAATTTATTGATTCTGTCTGCTGCTTGTTCTTGTTTTGATATAGATTGTTATTTACCTCGTTGCAGTTCCTACATCATGATCTAACCATGGAGGCGCTTTCTCCAGGACTTTTTGTGGACAATTCTGGAAAATATTGGGATGTGCCTTCTTCACTAGTTGTTGATCTAGGTTCTGCTGCTTCTGAATCGGGTTTAAGTTATCATTTGTCTATGCACCAGAATGCTGGGTCTCCCTCACAATCTGGAAATGAACAGACCCGTTCGGCTCCTTTCTGTTTACTTCCTGGTCTATCAGCCAAAGCTGCTTTTGCCTTTAAGAAGAACTTGGAAATCTGGAGAAGCAACGCCAAGAAGTTAAAGATGGTCCAACCGTATGACATTTTCCTATCAACTCCTCATGTTTCATTGTCAGCGATCATTGGTATGAATCCATACTGGTTTTCCTTCAATGAAACTTCTGATTCTATATGTAGCCCCTAAAGTTTTTGCTATTTTTTAGTTCTGTCTTTAATTTTTTAAAAGTTTTAATTTAATTATATGGCCAAGACTAGAGAGTAAAAAAGTCTCACTAGCCCTCCCGGATTAAAGGTTCCAGCCTTAACCTCTTTGATTTTTTTTTTTGATCTTATGTCAGTAGTTTAGGTGTTGGTGTTCATAGAAAATAATGTAAATGTTGTTAGACCATATATTTAGTCAGTTTCAATCACGTTAATGGGTAGTGGCCTTACTTGAACAAGATCAATTCTATAGGTTGTGCAATTGCGTCATTGAGTTCTAAAAATCACATAAATGAGTAGGAATTTCTTGAAGTTGTTTTGATATATTGAGGCTATATTGAAACTTTTATAAATATTAGGAGCAAAATGTTGTGACTGCAACCTTATTTTTATTTACAGTTGCGCATGCAATTGCTATCTTGGGCAATGAAATGCAAGGATTTGACAAATTCAGAAACCAGTCCATCCTTAACTTTTTCGTGTTCAAAATTTTCTTTTGCTGTATGGTATAAAAAATTTGGACTATTGTTTTGCATCAGGACAAGAAGAAATTTAGTTTAACTGTTTAAGATACTTTAGTTATTATATAGTTTTGTAGATGATATGAAGCTGCAAGCAAGTCCTTGGGAAATTTATATTTTGCAATTTCTACTAATTTTGGCATGCTATCTCTATTTTGATCTTAAAAGGTGCTGCGGCTACTTCCTACTTTGGAGAGAATTCGGTTAGATCAGCAGCACAAAACAGTCTTCAGGAATTTAAAGGACTTTACATGCAGACTTCTAGAATAAGATCTACTGTTTTTGCAGATGTATTTGCTTCCATTTCTTTTTCAGCTCAGTATGGGATGTTTCAAAGGAAATATCTGGATCTTACCCGTTTTTCTGCACGTATGGATTTCCATTCTGGCTCAAAGTTTCTTTCAGGAGCCATGCTTTTGATAGATGATATTTCCAACTCCCGGCACCCAAGAACTGAATCTGTGAAAGCGACTTTGCCCAACGCCAAATTTTCCCTTCAGCAGCAGGTACGTTTGTCTTCCATTCAGCTGCTTAGTGTGGACTAAATCAATAATGATAAAATGAAAAGAAAATCTACATCTTCGTATGCTAATCATGTACTGCTTTTTGGATCTGGGAAGTTCTGGTTCATATGAGTTTTGAAAATTCTTTGTGAAATTGTCTCCCGATTCGAACCCGTAATCCATAATTTAACCTCTAAACACTAGGTAGAACTTTTCCATGGTTTTGGAGAAGTTTGAAAGGAAAACGATAATACACATCTCGATTGAACCCTGGCAACAACTCATGGAAAAATGGGAAAATTTCTAGTACCGTAGGAGTACCATACTTCCCTTTTTGTCTTCATAAATATTAGTGGACTTCACATTAACGTTGGTGTGTCTCATTCTATTCTTAAAAAGTACGCTAATGTAGCACACAATAAATGGAGAAAGTATATAAAATTTTCGTACTCCCGTACAAGGAATTTTCCCTGGAAAAACCTTCTTTATAATTTTGTATAAGCCCACTGGTTGGGAACTATGCAGCATAATATGAGTTTGTAATGGTTTCTTGAAACATTGTTTTCAGATCGCTGGACCTGTCAGCTTTAGAGCAGATTCAGGAGTTACAATAGATTTGAATAAAGAAGGGTGGGGTTTATTAGGAGTGGATGAGCCTACATTTGCCTTGGAATATGCATTGCAGGTCCTTGGTTCAGCTAAAGCCATTGCTTGGTATTCACCAAAGCACAGAGAATTTATGGTAGAGCTTCGTTTCTATGAGACCTGA

mRNA sequence

ATGATGAAGAAGCTAAGATGGGCAATGGACGGCCAAGGCTTCTGGGATCTCGATGTTTCAACGCCTAGAACACTCGATGGCTCTGCCTCTCCTGTTCCTTCTCATTTACACTTACTTCCTTTGGGATTATCCAGAGGTGTTCGTCTTTCCAGGGCAAAGCAGATTGATTTCATGCAGAGTTTCATGGCTGCTCCTTTTGTTCCTTCTTATTCCCCCTCCCATGGCTTCTCTCTCCAACGCGTCTTCTCCATCCCCTTTTCAGATTCTGGCTCTGCTACTCTCTTAGGGCAGTTCAATTTGCAGAAATTCATCTCCTCTCTTAAGAAATCTGGTGTTGGAGACATGGGTCATCAGTCGCTTTCTTCATTTCTTCAATGCATTGGAAGGCATCTTTGCCATCGGTCTTTGTATGCCCTTGGTATCTCTTCTGATATCTTGTTACCACCTGATGATTCCCTGATGATTAGCTTCGATGGATATGGTGACAGTGAATTCCTACATCATGATCTAACCATGGAGGCGCTTTCTCCAGGACTTTTTGTGGACAATTCTGGAAAATATTGGGATGTGCCTTCTTCACTAGTTGTTGATCTAGGTTCTGCTGCTTCTGAATCGGGTTTAAGTTATCATTTGTCTATGCACCAGAATGCTGGGTCTCCCTCACAATCTGGAAATGAACAGACCCGTTCGGCTCCTTTCTGTTTACTTCCTGGTCTATCAGCCAAAGCTGCTTTTGCCTTTAAGAAGAACTTGGAAATCTGGAGAAGCAACGCCAAGAAGTTAAAGATGGTCCAACCGTATGACATTTTCCTATCAACTCCTCATGTTTCATTGTCAGCGATCATTGGTGCTGCGGCTACTTCCTACTTTGGAGAGAATTCGGTTAGATCAGCAGCACAAAACAGTCTTCAGGAATTTAAAGGACTTTACATGCAGACTTCTAGAATAAGATCTACTGTTTTTGCAGATGTATTTGCTTCCATTTCTTTTTCAGCTCAGTATGGGATGTTTCAAAGGAAATATCTGGATCTTACCCGTTTTTCTGCACGTATGGATTTCCATTCTGGCTCAAAGTTTCTTTCAGGAGCCATGCTTTTGATAGATGATATTTCCAACTCCCGGCACCCAAGAACTGAATCTGTGAAAGCGACTTTGCCCAACGCCAAATTTTCCCTTCAGCAGCAGATCGCTGGACCTGTCAGCTTTAGAGCAGATTCAGGAGTTACAATAGATTTGAATAAAGAAGGGTGGGGTTTATTAGGAGTGGATGAGCCTACATTTGCCTTGGAATATGCATTGCAGGTCCTTGGTTCAGCTAAAGCCATTGCTTGGTATTCACCAAAGCACAGAGAATTTATGGTAGAGCTTCGTTTCTATGAGACCTGA

Coding sequence (CDS)

ATGATGAAGAAGCTAAGATGGGCAATGGACGGCCAAGGCTTCTGGGATCTCGATGTTTCAACGCCTAGAACACTCGATGGCTCTGCCTCTCCTGTTCCTTCTCATTTACACTTACTTCCTTTGGGATTATCCAGAGGTGTTCGTCTTTCCAGGGCAAAGCAGATTGATTTCATGCAGAGTTTCATGGCTGCTCCTTTTGTTCCTTCTTATTCCCCCTCCCATGGCTTCTCTCTCCAACGCGTCTTCTCCATCCCCTTTTCAGATTCTGGCTCTGCTACTCTCTTAGGGCAGTTCAATTTGCAGAAATTCATCTCCTCTCTTAAGAAATCTGGTGTTGGAGACATGGGTCATCAGTCGCTTTCTTCATTTCTTCAATGCATTGGAAGGCATCTTTGCCATCGGTCTTTGTATGCCCTTGGTATCTCTTCTGATATCTTGTTACCACCTGATGATTCCCTGATGATTAGCTTCGATGGATATGGTGACAGTGAATTCCTACATCATGATCTAACCATGGAGGCGCTTTCTCCAGGACTTTTTGTGGACAATTCTGGAAAATATTGGGATGTGCCTTCTTCACTAGTTGTTGATCTAGGTTCTGCTGCTTCTGAATCGGGTTTAAGTTATCATTTGTCTATGCACCAGAATGCTGGGTCTCCCTCACAATCTGGAAATGAACAGACCCGTTCGGCTCCTTTCTGTTTACTTCCTGGTCTATCAGCCAAAGCTGCTTTTGCCTTTAAGAAGAACTTGGAAATCTGGAGAAGCAACGCCAAGAAGTTAAAGATGGTCCAACCGTATGACATTTTCCTATCAACTCCTCATGTTTCATTGTCAGCGATCATTGGTGCTGCGGCTACTTCCTACTTTGGAGAGAATTCGGTTAGATCAGCAGCACAAAACAGTCTTCAGGAATTTAAAGGACTTTACATGCAGACTTCTAGAATAAGATCTACTGTTTTTGCAGATGTATTTGCTTCCATTTCTTTTTCAGCTCAGTATGGGATGTTTCAAAGGAAATATCTGGATCTTACCCGTTTTTCTGCACGTATGGATTTCCATTCTGGCTCAAAGTTTCTTTCAGGAGCCATGCTTTTGATAGATGATATTTCCAACTCCCGGCACCCAAGAACTGAATCTGTGAAAGCGACTTTGCCCAACGCCAAATTTTCCCTTCAGCAGCAGATCGCTGGACCTGTCAGCTTTAGAGCAGATTCAGGAGTTACAATAGATTTGAATAAAGAAGGGTGGGGTTTATTAGGAGTGGATGAGCCTACATTTGCCTTGGAATATGCATTGCAGGTCCTTGGTTCAGCTAAAGCCATTGCTTGGTATTCACCAAAGCACAGAGAATTTATGGTAGAGCTTCGTTTCTATGAGACCTGA

Protein sequence

MMKKLRWAMDGQGFWDLDVSTPRTLDGSASPVPSHLHLLPLGLSRGVRLSRAKQIDFMQSFMAAPFVPSYSPSHGFSLQRVFSIPFSDSGSATLLGQFNLQKFISSLKKSGVGDMGHQSLSSFLQCIGRHLCHRSLYALGISSDILLPPDDSLMISFDGYGDSEFLHHDLTMEALSPGLFVDNSGKYWDVPSSLVVDLGSAASESGLSYHLSMHQNAGSPSQSGNEQTRSAPFCLLPGLSAKAAFAFKKNLEIWRSNAKKLKMVQPYDIFLSTPHVSLSAIIGAAATSYFGENSVRSAAQNSLQEFKGLYMQTSRIRSTVFADVFASISFSAQYGMFQRKYLDLTRFSARMDFHSGSKFLSGAMLLIDDISNSRHPRTESVKATLPNAKFSLQQQIAGPVSFRADSGVTIDLNKEGWGLLGVDEPTFALEYALQVLGSAKAIAWYSPKHREFMVELRFYET

Homology

[Close]

BLAST of HG10010459 vs. NCBI nr
Match: XP_038875869.1 (protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Benincasa hispida] >XP_038875870.1 protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Benincasa hispida])

HSP 1 Score: 859.8 bits (2220), Expect = 1.1e-245
Identity = 435/472 (92.16%), Postives = 448/472 (94.92%), Query Frame = 0


Query: 1   MMKKLRWAMDGQGFWDLDVSTPRTLDGSASPVPSHLHLLPLGLSRGVRLSRAKQIDFMQS 60
           MMKKLRWAMDGQGFWDLDVSTPRTLDGSASPVPSHLHLLPLGLSRGVRLSRAKQIDFMQS
Sbjct: 1   MMKKLRWAMDGQGFWDLDVSTPRTLDGSASPVPSHLHLLPLGLSRGVRLSRAKQIDFMQS 60

Query: 61  FMAAPFVPSYSPSHGFSLQRVFSIPFSDSGSATLLGQFNLQKFISSLKKSGVGDMGHQSL 120
           FMAAPFVPSYSPSHGFSLQRVFSIPFSDSGS TLLGQFNLQKFISSLKKSGVGDMG QSL
Sbjct: 61  FMAAPFVPSYSPSHGFSLQRVFSIPFSDSGSVTLLGQFNLQKFISSLKKSGVGDMG-QSL 120

Query: 121 SSFLQCIGRHLCHRSLYALGISSDILLPPDDSLMISFDGYGDSE-----------FLHHD 180
           SSFLQCIGRHLCHRSLYALGISSDILLPPDDSLMISFDGYGD+E           FLHHD
Sbjct: 121 SSFLQCIGRHLCHRSLYALGISSDILLPPDDSLMISFDGYGDNEIVRTKAVFHHKFLHHD 180

Query: 181 LTMEALSPGLFVDNSGKYWDVPSSLVVDLGSAASESGLSYHLSMHQNAGSPSQSGNEQTR 240
           LTMEA SPGLFVD SGKYWDVPS+LVVDLGSAASESGLSYHLSMHQN GSPSQSG+EQ R
Sbjct: 181 LTMEAFSPGLFVDKSGKYWDVPSALVVDLGSAASESGLSYHLSMHQNTGSPSQSGSEQAR 240

Query: 241 SAPFCLLPGLSAKAAFAFKKNLEIWRSNAKKLKMVQPYDIFLSTPHVSLSAIIGAAATSY 300
           S+P CLLPGLSAKAAFAFKKNLEIWRSNAKKLKMVQPYDIFLSTPHVSLS IIGA AT+Y
Sbjct: 241 SSPLCLLPGLSAKAAFAFKKNLEIWRSNAKKLKMVQPYDIFLSTPHVSLSGIIGAVATTY 300

Query: 301 FGENSVRSAAQNSLQEFKGLYMQTSRIRSTVFADVFASISFSAQYGMFQRKYLDLTRFSA 360
           FG+NS+RSAAQ+SL EFKGLY+QTSRIRSTVFADVFASISFSAQYGMFQRKYLDLT FSA
Sbjct: 301 FGDNSIRSAAQDSLPEFKGLYLQTSRIRSTVFADVFASISFSAQYGMFQRKYLDLTCFSA 360

Query: 361 RMDFHSGSKFLSGAMLLIDDISNSRHPRTESVKATLPNAKFSLQQQIAGPVSFRADSGVT 420
           RMDFHSGSKFLSGAMLLIDD+SNSRHPRTESV+ATLP+A+FSLQQQIAGPVSFRADSGV 
Sbjct: 361 RMDFHSGSKFLSGAMLLIDDLSNSRHPRTESVRATLPSARFSLQQQIAGPVSFRADSGVA 420

Query: 421 IDLNKEGWGLLGVDEPTFALEYALQVLGSAKAIAWYSPKHREFMVELRFYET 462
           IDLNK GWGLLGVDEPTFALEYALQVLGSAKAIAWYSPKHREFMVELRFYET
Sbjct: 421 IDLNKAGWGLLGVDEPTFALEYALQVLGSAKAIAWYSPKHREFMVELRFYET 471

[Close]

BLAST of HG10010459 vs. NCBI nr
Match: TYK02989.1 (protein TRIGALACTOSYLDIACYLGLYCEROL 4 [Cucumis melo var. makuwa])

HSP 1 Score: 795.0 bits (2052), Expect = 3.4e-226
Identity = 405/471 (85.99%), Postives = 427/471 (90.66%), Query Frame = 0


Query: 2   MKKLRWAMDGQGFWDLDVSTPRTLDGSASPVPSHLHLLPLGLSRGVRLSRAKQIDFMQSF 61
           MKKLRWAMD  GFWDLDVST RTLDGSASPVPS  HLLPLGLSRGVRLSRAKQIDFMQSF
Sbjct: 332 MKKLRWAMD--GFWDLDVSTSRTLDGSASPVPSPFHLLPLGLSRGVRLSRAKQIDFMQSF 391

Query: 62  MAAPFVPSYSPSHGFSLQRVFSIPFSDSGSATLLGQFNLQKFISSLKKSGVGDMGHQSLS 121
           M APFVPSYSPSHGFSLQRVFSIPFSDSGS TLLGQFNLQKF+SSL K+G G+MG QS S
Sbjct: 392 MVAPFVPSYSPSHGFSLQRVFSIPFSDSGSITLLGQFNLQKFMSSLMKTGSGEMG-QSFS 451

Query: 122 SFLQCIGRHLCHRSLYALGISSDILLPPDDSLMISFDGYGDSE-----------FLHHDL 181
           SF+QCIGRHL  RSLYA+GIS+DILLPPDDSLMISFDGYGDS+           FLHHDL
Sbjct: 452 SFIQCIGRHLYQRSLYAVGISADILLPPDDSLMISFDGYGDSDIVRTKAVFHRKFLHHDL 511

Query: 182 TMEALSPGLFVDNSGKYWDVPSSLVVDLGSAASESGLSYHLSMHQNAGSPSQSGNEQTRS 241
           TMEALSPGLF+D SG+YWDVPSSLVVDLGSAAS+SGLSYHLSMHQN G PS  G+E T S
Sbjct: 512 TMEALSPGLFMDKSGRYWDVPSSLVVDLGSAASDSGLSYHLSMHQNTGFPSPLGSEPTHS 571

Query: 242 APFCLLPGLSAKAAFAFKKNLEIWRSNAKKLKMVQPYDIFLSTPHVSLSAIIGAAATSYF 301
           APFCL PGLSAKAAFAFKKN EIWRSNAKKLKMVQPYDIFLSTPHVSLSAIIGA ATSYF
Sbjct: 572 APFCLFPGLSAKAAFAFKKNFEIWRSNAKKLKMVQPYDIFLSTPHVSLSAIIGAVATSYF 631

Query: 302 GENSVRSAAQNSLQEFKGLYMQTSRIRSTVFADVFASISFSAQYGMFQRKYLDLTRFSAR 361
           G++ VRSAAQ SL EFKG YMQTSRIRST+FAD+F SISFSAQYGMFQ+KYLDLTRFSA 
Sbjct: 632 GDDLVRSAAQGSLAEFKGFYMQTSRIRSTIFADLFTSISFSAQYGMFQKKYLDLTRFSAC 691

Query: 362 MDFHSGSKFLSGAMLLIDDISNSRHPRTESVKATLPNAKFSLQQQIAGPVSFRADSGVTI 421
           MDFHSGSKFLSG+MLLIDD+SNSRHP+TE+VKATLPNA+FS+QQQIAGPVSFRADSGV I
Sbjct: 692 MDFHSGSKFLSGSMLLIDDLSNSRHPKTEAVKATLPNARFSIQQQIAGPVSFRADSGVAI 751

Query: 422 DLNKEGWGLLGVDEPTFALEYALQVLGSAKAIAWYSPKHREFMVELRFYET 462
           DLNK GW LL VDEPTFALEYALQVLGSAKAIAWYSPKHREFMVELRFYET
Sbjct: 752 DLNKAGWDLLRVDEPTFALEYALQVLGSAKAIAWYSPKHREFMVELRFYET 799

[Close]

BLAST of HG10010459 vs. NCBI nr
Match: XP_008458282.1 (PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Cucumis melo])

HSP 1 Score: 795.0 bits (2052), Expect = 3.4e-226
Identity = 405/471 (85.99%), Postives = 427/471 (90.66%), Query Frame = 0


Query: 2   MKKLRWAMDGQGFWDLDVSTPRTLDGSASPVPSHLHLLPLGLSRGVRLSRAKQIDFMQSF 61
           MKKLRWAMD  GFWDLDVST RTLDGSASPVPS  HLLPLGLSRGVRLSRAKQIDFMQSF
Sbjct: 1   MKKLRWAMD--GFWDLDVSTSRTLDGSASPVPSPFHLLPLGLSRGVRLSRAKQIDFMQSF 60

Query: 62  MAAPFVPSYSPSHGFSLQRVFSIPFSDSGSATLLGQFNLQKFISSLKKSGVGDMGHQSLS 121
           M APFVPSYSPSHGFSLQRVFSIPFSDSGS TLLGQFNLQKF+SSL K+G G+MG QS S
Sbjct: 61  MVAPFVPSYSPSHGFSLQRVFSIPFSDSGSITLLGQFNLQKFMSSLMKTGSGEMG-QSFS 120

Query: 122 SFLQCIGRHLCHRSLYALGISSDILLPPDDSLMISFDGYGDSE-----------FLHHDL 181
           SF+QCIGRHL  RSLYA+GIS+DILLPPDDSLMISFDGYGDS+           FLHHDL
Sbjct: 121 SFIQCIGRHLYQRSLYAVGISADILLPPDDSLMISFDGYGDSDIVRTKAVFHRKFLHHDL 180

Query: 182 TMEALSPGLFVDNSGKYWDVPSSLVVDLGSAASESGLSYHLSMHQNAGSPSQSGNEQTRS 241
           TMEALSPGLF+D SG+YWDVPSSLVVDLGSAAS+SGLSYHLSMHQN G PS  G+E T S
Sbjct: 181 TMEALSPGLFMDKSGRYWDVPSSLVVDLGSAASDSGLSYHLSMHQNTGFPSPLGSEPTHS 240

Query: 242 APFCLLPGLSAKAAFAFKKNLEIWRSNAKKLKMVQPYDIFLSTPHVSLSAIIGAAATSYF 301
           APFCL PGLSAKAAFAFKKN EIWRSNAKKLKMVQPYDIFLSTPHVSLSAIIGA ATSYF
Sbjct: 241 APFCLFPGLSAKAAFAFKKNFEIWRSNAKKLKMVQPYDIFLSTPHVSLSAIIGAVATSYF 300

Query: 302 GENSVRSAAQNSLQEFKGLYMQTSRIRSTVFADVFASISFSAQYGMFQRKYLDLTRFSAR 361
           G++ VRSAAQ SL EFKG YMQTSRIRST+FAD+F SISFSAQYGMFQ+KYLDLTRFSA 
Sbjct: 301 GDDLVRSAAQGSLAEFKGFYMQTSRIRSTIFADLFTSISFSAQYGMFQKKYLDLTRFSAC 360

Query: 362 MDFHSGSKFLSGAMLLIDDISNSRHPRTESVKATLPNAKFSLQQQIAGPVSFRADSGVTI 421
           MDFHSGSKFLSG+MLLIDD+SNSRHP+TE+VKATLPNA+FS+QQQIAGPVSFRADSGV I
Sbjct: 361 MDFHSGSKFLSGSMLLIDDLSNSRHPKTEAVKATLPNARFSIQQQIAGPVSFRADSGVAI 420

Query: 422 DLNKEGWGLLGVDEPTFALEYALQVLGSAKAIAWYSPKHREFMVELRFYET 462
           DLNK GW LL VDEPTFALEYALQVLGSAKAIAWYSPKHREFMVELRFYET
Sbjct: 421 DLNKAGWDLLRVDEPTFALEYALQVLGSAKAIAWYSPKHREFMVELRFYET 468

[Close]

BLAST of HG10010459 vs. NCBI nr
Match: XP_004138517.2 (protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic isoform X1 [Cucumis sativus] >KGN45628.1 hypothetical protein Csa_005594 [Cucumis sativus])

HSP 1 Score: 786.6 bits (2030), Expect = 1.2e-223
Identity = 399/471 (84.71%), Postives = 428/471 (90.87%), Query Frame = 0


Query: 2   MKKLRWAMDGQGFWDLDVSTPRTLDGSASPVPSHLHLLPLGLSRGVRLSRAKQIDFMQSF 61
           MKKLRWAMDGQGFWDLDVST RTLDGSASPVPS LHLLPLGLSRGVRLSRAKQIDFMQ F
Sbjct: 1   MKKLRWAMDGQGFWDLDVSTSRTLDGSASPVPSPLHLLPLGLSRGVRLSRAKQIDFMQRF 60

Query: 62  MAAPFVPSYSPSHGFSLQRVFSIPFSDSGSATLLGQFNLQKFISSLKKSGVGDMGHQSLS 121
           MAAPFVPSYSPSHGFSLQRVFS+PFSDSGS TLLGQFNLQKF+SSL K+G G+M  QS S
Sbjct: 61  MAAPFVPSYSPSHGFSLQRVFSVPFSDSGSITLLGQFNLQKFMSSLMKTGSGEM-CQSYS 120

Query: 122 SFLQCIGRHLCHRSLYALGISSDILLPPDDSLMISFDGYGDSE-----------FLHHDL 181
           S LQ IGRHL  RSLYA+GIS+DILLPPDDSLMISFDGYGDS+           FLHHDL
Sbjct: 121 SLLQYIGRHLYQRSLYAVGISADILLPPDDSLMISFDGYGDSDIVRTKAVFHRKFLHHDL 180

Query: 182 TMEALSPGLFVDNSGKYWDVPSSLVVDLGSAASESGLSYHLSMHQNAGSPSQSGNEQTRS 241
           T+EALSPGLF++  G+YWDVPSSLVVDLGS AS+SGLSYHLSMHQNAG PSQ G+E T S
Sbjct: 181 TVEALSPGLFMEKCGRYWDVPSSLVVDLGSVASDSGLSYHLSMHQNAGFPSQLGSEPTHS 240

Query: 242 APFCLLPGLSAKAAFAFKKNLEIWRSNAKKLKMVQPYDIFLSTPHVSLSAIIGAAATSYF 301
           APFCLLPGLSAKAAFAFKKN EIWRSNAKKLKMVQPYDIFLSTPHVSLSAIIGA ATSYF
Sbjct: 241 APFCLLPGLSAKAAFAFKKNFEIWRSNAKKLKMVQPYDIFLSTPHVSLSAIIGAVATSYF 300

Query: 302 GENSVRSAAQNSLQEFKGLYMQTSRIRSTVFADVFASISFSAQYGMFQRKYLDLTRFSAR 361
           G++  RSAAQ+SL++FKG YM++SRIRSTVFAD+F SISFSAQYGMFQ+KYLDLTRFSA 
Sbjct: 301 GDDLARSAAQDSLEKFKGFYMKSSRIRSTVFADLFTSISFSAQYGMFQKKYLDLTRFSAC 360

Query: 362 MDFHSGSKFLSGAMLLIDDISNSRHPRTESVKATLPNAKFSLQQQIAGPVSFRADSGVTI 421
           MDFHSGSKFLSG+MLLIDD+SNSRHP+TESVKATLPNA+FS+QQQIAGPVSFRAD+GV I
Sbjct: 361 MDFHSGSKFLSGSMLLIDDLSNSRHPKTESVKATLPNARFSIQQQIAGPVSFRADTGVAI 420

Query: 422 DLNKEGWGLLGVDEPTFALEYALQVLGSAKAIAWYSPKHREFMVELRFYET 462
           DLNK GW LL V+EPTFALEYAL VLGSAKAIAWYSPKHREFMVELRFYET
Sbjct: 421 DLNKAGWDLLRVEEPTFALEYALHVLGSAKAIAWYSPKHREFMVELRFYET 470

[Close]

BLAST of HG10010459 vs. NCBI nr
Match: XP_023548884.1 (protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023548885.1 protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023548886.1 protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023548887.1 protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 784.3 bits (2024), Expect = 5.9e-223
Identity = 400/471 (84.93%), Postives = 424/471 (90.02%), Query Frame = 0


Query: 1   MMKKLRWAMDGQGFWDLDVSTPRTLDGSASPVPSHLHLLPLGLSRGVRLSRAKQIDFMQS 60
           MMKKLRW M+GQ FWDLDVSTPRTLDGSASPVP+ L LLPLGLSRGVRLSRAKQIDFMQ 
Sbjct: 1   MMKKLRWTMEGQSFWDLDVSTPRTLDGSASPVPTDLQLLPLGLSRGVRLSRAKQIDFMQQ 60

Query: 61  FMAAPFVPSYSPSHGFSLQRVFSIPFSDSGSATLLGQFNLQKFISSLKKSGVGDMGHQSL 120
           FMAAPFVPSY+PSHGFSLQRVFSIPFSDSGSATLLGQFN+QKF+SSLKKSG G+MG QS+
Sbjct: 61  FMAAPFVPSYTPSHGFSLQRVFSIPFSDSGSATLLGQFNVQKFVSSLKKSGFGEMG-QSI 120

Query: 121 SSFLQCIGRHLCHRSLYALGISSDILLPPDDSLMISFDGYGDSE-----------FLHHD 180
           SS LQ IGRHL  RSLYA GISSDILL PDD+L+ISFDGYGDS+           FLHHD
Sbjct: 121 SSLLQGIGRHLRDRSLYAFGISSDILLTPDDALLISFDGYGDSDILRTKAVLHHKFLHHD 180

Query: 181 LTMEALSPGLFVDNSGKYWDVPSSLVVDLGSAASESGLSYHLSMHQNAGSPSQSGNEQTR 240
           LTMEALSPGLFVD SGKYWDVPSSLV+DLGSAA++SGLSYHLSMH NAGSPSQSG+EQT 
Sbjct: 181 LTMEALSPGLFVDKSGKYWDVPSSLVIDLGSAATDSGLSYHLSMHHNAGSPSQSGSEQTC 240

Query: 241 SAPFCLLPGLSAKAAFAFKKNLEIWRSNAKKLKMVQPYDIFLSTPHVSLSAIIGAAATSY 300
            APFCLLPGLSAKAAFA KKNLEIWRSNAKKLK VQPYDIFLS PHVSLS IIGA ATSY
Sbjct: 241 MAPFCLLPGLSAKAAFALKKNLEIWRSNAKKLKRVQPYDIFLSNPHVSLSGIIGAVATSY 300

Query: 301 FGENSVRSAAQNSLQEFKGLYMQTSRIRSTVFADVFASISFSAQYGMFQRKYLDLTRFSA 360
           FG+ S  SAA+ SLQEFKGLYMQTSRIRSTVFADVFASISFSAQYGMFQR +LDLTRFS 
Sbjct: 301 FGDISAGSAAEGSLQEFKGLYMQTSRIRSTVFADVFASISFSAQYGMFQRNFLDLTRFSG 360

Query: 361 RMDFHSGSKFLSGAMLLIDDISNSRHPRTESVKATLPNAKFSLQQQIAGPVSFRADSGVT 420
           R DFHSGSKFLSGAMLLI+D+SNS+HPRTESVKATLPNA+FS QQQIAGPVSFRAD+GV 
Sbjct: 361 RFDFHSGSKFLSGAMLLIEDLSNSQHPRTESVKATLPNARFSFQQQIAGPVSFRADTGVA 420

Query: 421 IDLNKEGWGLLGVDEPTFALEYALQVLGSAKAIAWYSPKHREFMVELRFYE 461
           IDL+K GWG L V+EPTFALEYAL VLGSAKAIAWYSPK REFMVELRFYE
Sbjct: 421 IDLSKAGWGSLQVEEPTFALEYALHVLGSAKAIAWYSPKQREFMVELRFYE 470

[Close]

BLAST of HG10010459 vs. ExPASy Swiss-Prot
Match: Q9M903 (Protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TGD4 PE=1 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 4.4e-120
Identity = 232/483 (48.03%), Postives = 314/483 (65.01%), Query Frame = 0


Query: 2   MKKLRWAMDGQGFWDLDVSTPRTLDGSASPVPSHLHLLPLGLSRGVRLSRAKQIDFMQSF 61
           M ++RW  +G   WDLD+STP TL+G+A  VP     LPLGLSRG RLSR KQ++F   F
Sbjct: 1   MNRMRWVGEGD-IWDLDMSTPVTLEGTARAVPD--DPLPLGLSRGTRLSRPKQVEFFHRF 60

Query: 62  MAAPFVPSYSP---------SHGFSLQRVFSIPFSDSGSATLLGQFNLQKFISSLKKSGV 121
           MA+P +PS+SP           GFSLQRV ++PFS++   +LLGQF++Q+F++ + K+  
Sbjct: 61  MASPLIPSFSPIRPNTGDGGGGGFSLQRVLTLPFSNNWLVSLLGQFDVQRFVTEIDKTKA 120

Query: 122 GDMGHQS-LSSFLQCIGRHLCHRSLYALGISSDILLPPDDSLMISFDGY-GD-------- 181
              G  S ++S L  IG+HL  +SLYALG  S+ LL PDD+L++S+D Y GD        
Sbjct: 121 FGRGSSSTVASRLNTIGKHLKDKSLYALGFCSEFLLSPDDTLLLSYDAYKGDLDKNPRAK 180

Query: 182 ----SEFLHHDLTMEALSPGLFVDNSGKYWDVPSSLVVDLGSAASESGLSYHLSMHQNAG 241
                EF  H+LT EA+ PGLFVD  G+YWDVP S+ +DL S  +ESG SYHL +H N+G
Sbjct: 181 AIFNHEFPLHNLTAEAVWPGLFVDKHGEYWDVPLSMAIDLASLPAESGPSYHLCLHHNSG 240

Query: 242 SPSQSGNEQTRSAPFCLLPGLSAKAAFAFKKNLEIWRSNAKKLKMVQPYDIFLSTPHVSL 301
           SP +  ++     P  LLPGLS K+A +++ N+++WR    KL+  +PYD+FLS+PHV++
Sbjct: 241 SPKKLHSDTMEVPPPSLLPGLSLKSAVSYRTNMDLWRGTTPKLETCKPYDVFLSSPHVAV 300

Query: 302 SAIIGAAATSYFGENSVRSAAQNSLQEFKGLYMQTSRIRSTVFADVFASISFSAQYGMFQ 361
           S IIG+  T+ FGENS+RS  +N  +   G  +    + S   AD     S +AQYG FQ
Sbjct: 301 SGIIGSVMTAAFGENSIRSKFENDSEGVGGFSLHFPSVNSGFMADALGRASLTAQYGNFQ 360

Query: 362 RKYLDLTRFSARMDFHSGSKFLSGAMLLIDDISNSRHPRTESVKATLPNAKFSLQQQIAG 421
           + + DLTRF AR+DF  G +FL+GA  +  D+ NSR P  E+ +   P    SLQQQI G
Sbjct: 361 KFFFDLTRFHARLDFPHGLRFLTGATSVAQDLLNSRQPSLEAFQKICPEVLVSLQQQIVG 420

Query: 422 PVSFRADSGVTIDLNKEGWGLLGVDEPTFALEYALQVLGSAKAIAWYSPKHREFMVELRF 462
           P SF+ +SG+ IDL + G   + VD+  FA+EYALQVL SAKA+  YSPK  EFMVELRF
Sbjct: 421 PFSFKVESGIEIDL-RNGANPVTVDKTVFAIEYALQVLLSAKAVVSYSPKQNEFMVELRF 479

[Close]

BLAST of HG10010459 vs. ExPASy TrEMBL
Match: A0A5D3BY40 (Protein TRIGALACTOSYLDIACYLGLYCEROL 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00780 PE=3 SV=1)

HSP 1 Score: 795.0 bits (2052), Expect = 1.6e-226
Identity = 405/471 (85.99%), Postives = 427/471 (90.66%), Query Frame = 0


Query: 2   MKKLRWAMDGQGFWDLDVSTPRTLDGSASPVPSHLHLLPLGLSRGVRLSRAKQIDFMQSF 61
           MKKLRWAMD  GFWDLDVST RTLDGSASPVPS  HLLPLGLSRGVRLSRAKQIDFMQSF
Sbjct: 332 MKKLRWAMD--GFWDLDVSTSRTLDGSASPVPSPFHLLPLGLSRGVRLSRAKQIDFMQSF 391

Query: 62  MAAPFVPSYSPSHGFSLQRVFSIPFSDSGSATLLGQFNLQKFISSLKKSGVGDMGHQSLS 121
           M APFVPSYSPSHGFSLQRVFSIPFSDSGS TLLGQFNLQKF+SSL K+G G+MG QS S
Sbjct: 392 MVAPFVPSYSPSHGFSLQRVFSIPFSDSGSITLLGQFNLQKFMSSLMKTGSGEMG-QSFS 451

Query: 122 SFLQCIGRHLCHRSLYALGISSDILLPPDDSLMISFDGYGDSE-----------FLHHDL 181
           SF+QCIGRHL  RSLYA+GIS+DILLPPDDSLMISFDGYGDS+           FLHHDL
Sbjct: 452 SFIQCIGRHLYQRSLYAVGISADILLPPDDSLMISFDGYGDSDIVRTKAVFHRKFLHHDL 511

Query: 182 TMEALSPGLFVDNSGKYWDVPSSLVVDLGSAASESGLSYHLSMHQNAGSPSQSGNEQTRS 241
           TMEALSPGLF+D SG+YWDVPSSLVVDLGSAAS+SGLSYHLSMHQN G PS  G+E T S
Sbjct: 512 TMEALSPGLFMDKSGRYWDVPSSLVVDLGSAASDSGLSYHLSMHQNTGFPSPLGSEPTHS 571

Query: 242 APFCLLPGLSAKAAFAFKKNLEIWRSNAKKLKMVQPYDIFLSTPHVSLSAIIGAAATSYF 301
           APFCL PGLSAKAAFAFKKN EIWRSNAKKLKMVQPYDIFLSTPHVSLSAIIGA ATSYF
Sbjct: 572 APFCLFPGLSAKAAFAFKKNFEIWRSNAKKLKMVQPYDIFLSTPHVSLSAIIGAVATSYF 631

Query: 302 GENSVRSAAQNSLQEFKGLYMQTSRIRSTVFADVFASISFSAQYGMFQRKYLDLTRFSAR 361
           G++ VRSAAQ SL EFKG YMQTSRIRST+FAD+F SISFSAQYGMFQ+KYLDLTRFSA 
Sbjct: 632 GDDLVRSAAQGSLAEFKGFYMQTSRIRSTIFADLFTSISFSAQYGMFQKKYLDLTRFSAC 691

Query: 362 MDFHSGSKFLSGAMLLIDDISNSRHPRTESVKATLPNAKFSLQQQIAGPVSFRADSGVTI 421
           MDFHSGSKFLSG+MLLIDD+SNSRHP+TE+VKATLPNA+FS+QQQIAGPVSFRADSGV I
Sbjct: 692 MDFHSGSKFLSGSMLLIDDLSNSRHPKTEAVKATLPNARFSIQQQIAGPVSFRADSGVAI 751

Query: 422 DLNKEGWGLLGVDEPTFALEYALQVLGSAKAIAWYSPKHREFMVELRFYET 462
           DLNK GW LL VDEPTFALEYALQVLGSAKAIAWYSPKHREFMVELRFYET
Sbjct: 752 DLNKAGWDLLRVDEPTFALEYALQVLGSAKAIAWYSPKHREFMVELRFYET 799

[Close]

BLAST of HG10010459 vs. ExPASy TrEMBL
Match: A0A1S3C837 (protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497747 PE=4 SV=1)

HSP 1 Score: 795.0 bits (2052), Expect = 1.6e-226
Identity = 405/471 (85.99%), Postives = 427/471 (90.66%), Query Frame = 0


Query: 2   MKKLRWAMDGQGFWDLDVSTPRTLDGSASPVPSHLHLLPLGLSRGVRLSRAKQIDFMQSF 61
           MKKLRWAMD  GFWDLDVST RTLDGSASPVPS  HLLPLGLSRGVRLSRAKQIDFMQSF
Sbjct: 1   MKKLRWAMD--GFWDLDVSTSRTLDGSASPVPSPFHLLPLGLSRGVRLSRAKQIDFMQSF 60

Query: 62  MAAPFVPSYSPSHGFSLQRVFSIPFSDSGSATLLGQFNLQKFISSLKKSGVGDMGHQSLS 121
           M APFVPSYSPSHGFSLQRVFSIPFSDSGS TLLGQFNLQKF+SSL K+G G+MG QS S
Sbjct: 61  MVAPFVPSYSPSHGFSLQRVFSIPFSDSGSITLLGQFNLQKFMSSLMKTGSGEMG-QSFS 120

Query: 122 SFLQCIGRHLCHRSLYALGISSDILLPPDDSLMISFDGYGDSE-----------FLHHDL 181
           SF+QCIGRHL  RSLYA+GIS+DILLPPDDSLMISFDGYGDS+           FLHHDL
Sbjct: 121 SFIQCIGRHLYQRSLYAVGISADILLPPDDSLMISFDGYGDSDIVRTKAVFHRKFLHHDL 180

Query: 182 TMEALSPGLFVDNSGKYWDVPSSLVVDLGSAASESGLSYHLSMHQNAGSPSQSGNEQTRS 241
           TMEALSPGLF+D SG+YWDVPSSLVVDLGSAAS+SGLSYHLSMHQN G PS  G+E T S
Sbjct: 181 TMEALSPGLFMDKSGRYWDVPSSLVVDLGSAASDSGLSYHLSMHQNTGFPSPLGSEPTHS 240

Query: 242 APFCLLPGLSAKAAFAFKKNLEIWRSNAKKLKMVQPYDIFLSTPHVSLSAIIGAAATSYF 301
           APFCL PGLSAKAAFAFKKN EIWRSNAKKLKMVQPYDIFLSTPHVSLSAIIGA ATSYF
Sbjct: 241 APFCLFPGLSAKAAFAFKKNFEIWRSNAKKLKMVQPYDIFLSTPHVSLSAIIGAVATSYF 300

Query: 302 GENSVRSAAQNSLQEFKGLYMQTSRIRSTVFADVFASISFSAQYGMFQRKYLDLTRFSAR 361
           G++ VRSAAQ SL EFKG YMQTSRIRST+FAD+F SISFSAQYGMFQ+KYLDLTRFSA 
Sbjct: 301 GDDLVRSAAQGSLAEFKGFYMQTSRIRSTIFADLFTSISFSAQYGMFQKKYLDLTRFSAC 360

Query: 362 MDFHSGSKFLSGAMLLIDDISNSRHPRTESVKATLPNAKFSLQQQIAGPVSFRADSGVTI 421
           MDFHSGSKFLSG+MLLIDD+SNSRHP+TE+VKATLPNA+FS+QQQIAGPVSFRADSGV I
Sbjct: 361 MDFHSGSKFLSGSMLLIDDLSNSRHPKTEAVKATLPNARFSIQQQIAGPVSFRADSGVAI 420

Query: 422 DLNKEGWGLLGVDEPTFALEYALQVLGSAKAIAWYSPKHREFMVELRFYET 462
           DLNK GW LL VDEPTFALEYALQVLGSAKAIAWYSPKHREFMVELRFYET
Sbjct: 421 DLNKAGWDLLRVDEPTFALEYALQVLGSAKAIAWYSPKHREFMVELRFYET 468

[Close]

BLAST of HG10010459 vs. ExPASy TrEMBL
Match: A0A0A0K824 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G001740 PE=4 SV=1)

HSP 1 Score: 786.6 bits (2030), Expect = 5.8e-224
Identity = 399/471 (84.71%), Postives = 428/471 (90.87%), Query Frame = 0


Query: 2   MKKLRWAMDGQGFWDLDVSTPRTLDGSASPVPSHLHLLPLGLSRGVRLSRAKQIDFMQSF 61
           MKKLRWAMDGQGFWDLDVST RTLDGSASPVPS LHLLPLGLSRGVRLSRAKQIDFMQ F
Sbjct: 1   MKKLRWAMDGQGFWDLDVSTSRTLDGSASPVPSPLHLLPLGLSRGVRLSRAKQIDFMQRF 60

Query: 62  MAAPFVPSYSPSHGFSLQRVFSIPFSDSGSATLLGQFNLQKFISSLKKSGVGDMGHQSLS 121
           MAAPFVPSYSPSHGFSLQRVFS+PFSDSGS TLLGQFNLQKF+SSL K+G G+M  QS S
Sbjct: 61  MAAPFVPSYSPSHGFSLQRVFSVPFSDSGSITLLGQFNLQKFMSSLMKTGSGEM-CQSYS 120

Query: 122 SFLQCIGRHLCHRSLYALGISSDILLPPDDSLMISFDGYGDSE-----------FLHHDL 181
           S LQ IGRHL  RSLYA+GIS+DILLPPDDSLMISFDGYGDS+           FLHHDL
Sbjct: 121 SLLQYIGRHLYQRSLYAVGISADILLPPDDSLMISFDGYGDSDIVRTKAVFHRKFLHHDL 180

Query: 182 TMEALSPGLFVDNSGKYWDVPSSLVVDLGSAASESGLSYHLSMHQNAGSPSQSGNEQTRS 241
           T+EALSPGLF++  G+YWDVPSSLVVDLGS AS+SGLSYHLSMHQNAG PSQ G+E T S
Sbjct: 181 TVEALSPGLFMEKCGRYWDVPSSLVVDLGSVASDSGLSYHLSMHQNAGFPSQLGSEPTHS 240

Query: 242 APFCLLPGLSAKAAFAFKKNLEIWRSNAKKLKMVQPYDIFLSTPHVSLSAIIGAAATSYF 301
           APFCLLPGLSAKAAFAFKKN EIWRSNAKKLKMVQPYDIFLSTPHVSLSAIIGA ATSYF
Sbjct: 241 APFCLLPGLSAKAAFAFKKNFEIWRSNAKKLKMVQPYDIFLSTPHVSLSAIIGAVATSYF 300

Query: 302 GENSVRSAAQNSLQEFKGLYMQTSRIRSTVFADVFASISFSAQYGMFQRKYLDLTRFSAR 361
           G++  RSAAQ+SL++FKG YM++SRIRSTVFAD+F SISFSAQYGMFQ+KYLDLTRFSA 
Sbjct: 301 GDDLARSAAQDSLEKFKGFYMKSSRIRSTVFADLFTSISFSAQYGMFQKKYLDLTRFSAC 360

Query: 362 MDFHSGSKFLSGAMLLIDDISNSRHPRTESVKATLPNAKFSLQQQIAGPVSFRADSGVTI 421
           MDFHSGSKFLSG+MLLIDD+SNSRHP+TESVKATLPNA+FS+QQQIAGPVSFRAD+GV I
Sbjct: 361 MDFHSGSKFLSGSMLLIDDLSNSRHPKTESVKATLPNARFSIQQQIAGPVSFRADTGVAI 420

Query: 422 DLNKEGWGLLGVDEPTFALEYALQVLGSAKAIAWYSPKHREFMVELRFYET 462
           DLNK GW LL V+EPTFALEYAL VLGSAKAIAWYSPKHREFMVELRFYET
Sbjct: 421 DLNKAGWDLLRVEEPTFALEYALHVLGSAKAIAWYSPKHREFMVELRFYET 470

[Close]

BLAST of HG10010459 vs. ExPASy TrEMBL
Match: A0A6J1H3U0 (protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111460245 PE=4 SV=1)

HSP 1 Score: 777.3 bits (2006), Expect = 3.5e-221
Identity = 396/471 (84.08%), Postives = 422/471 (89.60%), Query Frame = 0


Query: 1   MMKKLRWAMDGQGFWDLDVSTPRTLDGSASPVPSHLHLLPLGLSRGVRLSRAKQIDFMQS 60
           MMKKLRW M+GQ FWDLDVSTPRTLDGSASPVP+ L LLPLGLSRGVRLSRAKQIDFMQ 
Sbjct: 1   MMKKLRWTMEGQSFWDLDVSTPRTLDGSASPVPTDLQLLPLGLSRGVRLSRAKQIDFMQQ 60

Query: 61  FMAAPFVPSYSPSHGFSLQRVFSIPFSDSGSATLLGQFNLQKFISSLKKSGVGDMGHQSL 120
           FMAAPFVPS++PSHGFSLQRVFSIPFSDSGSATLLGQFN+QKF+SSLKKSG G+MG QS+
Sbjct: 61  FMAAPFVPSFTPSHGFSLQRVFSIPFSDSGSATLLGQFNVQKFVSSLKKSGFGEMG-QSI 120

Query: 121 SSFLQCIGRHLCHRSLYALGISSDILLPPDDSLMISFDGYGDSE-----------FLHHD 180
           SS LQ IGRHL  RSLYA GISSDILL PDD+L+ISFDGYGDS+           FLHHD
Sbjct: 121 SSLLQGIGRHLRDRSLYAFGISSDILLTPDDALLISFDGYGDSDILRTKAVLHHKFLHHD 180

Query: 181 LTMEALSPGLFVDNSGKYWDVPSSLVVDLGSAASESGLSYHLSMHQNAGSPSQSGNEQTR 240
           LTMEALSPGLFVD SGKYWDVPSSLV+DLGSA ++SGLSYHLSMH NAGSPSQSG+EQT 
Sbjct: 181 LTMEALSPGLFVDKSGKYWDVPSSLVIDLGSADTDSGLSYHLSMHHNAGSPSQSGSEQTC 240

Query: 241 SAPFCLLPGLSAKAAFAFKKNLEIWRSNAKKLKMVQPYDIFLSTPHVSLSAIIGAAATSY 300
            APFCLLPGLSAKAAFA KKNLEIWRSNAKKLK VQPYDIFL+ PHVSLS IIGA ATSY
Sbjct: 241 MAPFCLLPGLSAKAAFALKKNLEIWRSNAKKLKRVQPYDIFLANPHVSLSGIIGAVATSY 300

Query: 301 FGENSVRSAAQNSLQEFKGLYMQTSRIRSTVFADVFASISFSAQYGMFQRKYLDLTRFSA 360
           FG+ S  SAA+ SLQEF+GLYMQTSRIRSTVFADVFASISFSAQYGMFQR +LDLTRFS 
Sbjct: 301 FGDISAGSAAEGSLQEFRGLYMQTSRIRSTVFADVFASISFSAQYGMFQRNFLDLTRFSG 360

Query: 361 RMDFHSGSKFLSGAMLLIDDISNSRHPRTESVKATLPNAKFSLQQQIAGPVSFRADSGVT 420
           R DFHSGSKFLSGAMLLI+D+SNS+HPRTESVKATLPNA+FS QQQIAGPVSFRADSGV 
Sbjct: 361 RFDFHSGSKFLSGAMLLIEDLSNSQHPRTESVKATLPNARFSFQQQIAGPVSFRADSGVA 420

Query: 421 IDLNKEGWGLLGVDEPTFALEYALQVLGSAKAIAWYSPKHREFMVELRFYE 461
           IDL+K GWG L V+EPTFALEYAL  LGSAKAIAWYSPK REFMVELRFYE
Sbjct: 421 IDLSKAGWGSLQVEEPTFALEYALYALGSAKAIAWYSPKQREFMVELRFYE 470

[Close]

BLAST of HG10010459 vs. ExPASy TrEMBL
Match: A0A6J1KW75 (protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111499258 PE=4 SV=1)

HSP 1 Score: 775.0 bits (2000), Expect = 1.7e-220
Identity = 397/471 (84.29%), Postives = 421/471 (89.38%), Query Frame = 0


Query: 1   MMKKLRWAMDGQGFWDLDVSTPRTLDGSASPVPSHLHLLPLGLSRGVRLSRAKQIDFMQS 60
           MMKKLRW M+GQ FWDLDVSTPRTLDGSASPVP+ L LLPLGLSRGVRLSRAKQIDFMQ 
Sbjct: 1   MMKKLRWTMEGQSFWDLDVSTPRTLDGSASPVPTDLQLLPLGLSRGVRLSRAKQIDFMQQ 60

Query: 61  FMAAPFVPSYSPSHGFSLQRVFSIPFSDSGSATLLGQFNLQKFISSLKKSGVGDMGHQSL 120
           FMAAPFVPSY+PSHGFSLQRVFSIPFSDSGSATLLGQFN+QKF+SSLKKSG G+MG QSL
Sbjct: 61  FMAAPFVPSYTPSHGFSLQRVFSIPFSDSGSATLLGQFNVQKFVSSLKKSGFGEMG-QSL 120

Query: 121 SSFLQCIGRHLCHRSLYALGISSDILLPPDDSLMISFDGYGDSE-----------FLHHD 180
           SS LQ IGRHL  RSLYA GISSDILL PDD+L+ISFDGYGDS+           FLHHD
Sbjct: 121 SSLLQGIGRHLRDRSLYAFGISSDILLTPDDALLISFDGYGDSDVLRTKAVLHHKFLHHD 180

Query: 181 LTMEALSPGLFVDNSGKYWDVPSSLVVDLGSAASESGLSYHLSMHQNAGSPSQSGNEQTR 240
           LTMEALSPGLFVD SGKYWDVPSSLV+DLGSAA++SGLSYHLSMH NAGSPSQSG+EQT 
Sbjct: 181 LTMEALSPGLFVDKSGKYWDVPSSLVIDLGSAATDSGLSYHLSMHHNAGSPSQSGSEQTC 240

Query: 241 SAPFCLLPGLSAKAAFAFKKNLEIWRSNAKKLKMVQPYDIFLSTPHVSLSAIIGAAATSY 300
            APFCLLPGLSAKAAFA KKNLEIWRSNAKKLK VQPYDIFLS PHVSLS IIGA ATSY
Sbjct: 241 MAPFCLLPGLSAKAAFALKKNLEIWRSNAKKLKRVQPYDIFLSNPHVSLSGIIGAVATSY 300

Query: 301 FGENSVRSAAQNSLQEFKGLYMQTSRIRSTVFADVFASISFSAQYGMFQRKYLDLTRFSA 360
           F + SV SAA+ SLQEFKGL+MQTSRIRSTVFADVFASISFSAQYGMFQ  +LDLTRFS 
Sbjct: 301 FRDISVGSAAEGSLQEFKGLHMQTSRIRSTVFADVFASISFSAQYGMFQSNFLDLTRFSG 360

Query: 361 RMDFHSGSKFLSGAMLLIDDISNSRHPRTESVKATLPNAKFSLQQQIAGPVSFRADSGVT 420
           R DFHSGSKFLSGAMLLI+D+SNS+HPRTESVKATLPNA+FS QQQIAGPVSFRAD+GV 
Sbjct: 361 RFDFHSGSKFLSGAMLLIEDLSNSQHPRTESVKATLPNARFSFQQQIAGPVSFRADTGVA 420

Query: 421 IDLNKEGWGLLGVDEPTFALEYALQVLGSAKAIAWYSPKHREFMVELRFYE 461
           IDL+K GWG L V+EPTFALEYAL  LGSAKAIAWYSPK  EFMVELRFYE
Sbjct: 421 IDLSKAGWGSLQVEEPTFALEYALYALGSAKAIAWYSPKQTEFMVELRFYE 470

[Close]

BLAST of HG10010459 vs. TAIR 10
Match: AT3G06960.1 (pigment defective 320 )

HSP 1 Score: 433.0 bits (1112), Expect = 3.1e-121
Identity = 232/483 (48.03%), Postives = 314/483 (65.01%), Query Frame = 0


Query: 2   MKKLRWAMDGQGFWDLDVSTPRTLDGSASPVPSHLHLLPLGLSRGVRLSRAKQIDFMQSF 61
           M ++RW  +G   WDLD+STP TL+G+A  VP     LPLGLSRG RLSR KQ++F   F
Sbjct: 1   MNRMRWVGEGD-IWDLDMSTPVTLEGTARAVPD--DPLPLGLSRGTRLSRPKQVEFFHRF 60

Query: 62  MAAPFVPSYSP---------SHGFSLQRVFSIPFSDSGSATLLGQFNLQKFISSLKKSGV 121
           MA+P +PS+SP           GFSLQRV ++PFS++   +LLGQF++Q+F++ + K+  
Sbjct: 61  MASPLIPSFSPIRPNTGDGGGGGFSLQRVLTLPFSNNWLVSLLGQFDVQRFVTEIDKTKA 120

Query: 122 GDMGHQS-LSSFLQCIGRHLCHRSLYALGISSDILLPPDDSLMISFDGY-GD-------- 181
              G  S ++S L  IG+HL  +SLYALG  S+ LL PDD+L++S+D Y GD        
Sbjct: 121 FGRGSSSTVASRLNTIGKHLKDKSLYALGFCSEFLLSPDDTLLLSYDAYKGDLDKNPRAK 180

Query: 182 ----SEFLHHDLTMEALSPGLFVDNSGKYWDVPSSLVVDLGSAASESGLSYHLSMHQNAG 241
                EF  H+LT EA+ PGLFVD  G+YWDVP S+ +DL S  +ESG SYHL +H N+G
Sbjct: 181 AIFNHEFPLHNLTAEAVWPGLFVDKHGEYWDVPLSMAIDLASLPAESGPSYHLCLHHNSG 240

Query: 242 SPSQSGNEQTRSAPFCLLPGLSAKAAFAFKKNLEIWRSNAKKLKMVQPYDIFLSTPHVSL 301
           SP +  ++     P  LLPGLS K+A +++ N+++WR    KL+  +PYD+FLS+PHV++
Sbjct: 241 SPKKLHSDTMEVPPPSLLPGLSLKSAVSYRTNMDLWRGTTPKLETCKPYDVFLSSPHVAV 300

Query: 302 SAIIGAAATSYFGENSVRSAAQNSLQEFKGLYMQTSRIRSTVFADVFASISFSAQYGMFQ 361
           S IIG+  T+ FGENS+RS  +N  +   G  +    + S   AD     S +AQYG FQ
Sbjct: 301 SGIIGSVMTAAFGENSIRSKFENDSEGVGGFSLHFPSVNSGFMADALGRASLTAQYGNFQ 360

Query: 362 RKYLDLTRFSARMDFHSGSKFLSGAMLLIDDISNSRHPRTESVKATLPNAKFSLQQQIAG 421
           + + DLTRF AR+DF  G +FL+GA  +  D+ NSR P  E+ +   P    SLQQQI G
Sbjct: 361 KFFFDLTRFHARLDFPHGLRFLTGATSVAQDLLNSRQPSLEAFQKICPEVLVSLQQQIVG 420

Query: 422 PVSFRADSGVTIDLNKEGWGLLGVDEPTFALEYALQVLGSAKAIAWYSPKHREFMVELRF 462
           P SF+ +SG+ IDL + G   + VD+  FA+EYALQVL SAKA+  YSPK  EFMVELRF
Sbjct: 421 PFSFKVESGIEIDL-RNGANPVTVDKTVFAIEYALQVLLSAKAVVSYSPKQNEFMVELRF 479

[Close]

BLAST of HG10010459 vs. TAIR 10
Match: AT3G06960.2 (pigment defective 320 )

HSP 1 Score: 276.2 bits (705), Expect = 4.9e-74
Identity = 146/305 (47.87%), Postives = 202/305 (66.23%), Query Frame = 0


Query: 2   MKKLRWAMDGQGFWDLDVSTPRTLDGSASPVPSHLHLLPLGLSRGVRLSRAKQIDFMQSF 61
           M ++RW  +G   WDLD+STP TL+G+A  VP     LPLGLSRG RLSR KQ++F   F
Sbjct: 1   MNRMRWVGEGD-IWDLDMSTPVTLEGTARAVPD--DPLPLGLSRGTRLSRPKQVEFFHRF 60

Query: 62  MAAPFVPSYSP---------SHGFSLQRVFSIPFSDSGSATLLGQFNLQKFISSLKKSGV 121
           MA+P +PS+SP           GFSLQRV ++PFS++   +LLGQF++Q+F++ + K+  
Sbjct: 61  MASPLIPSFSPIRPNTGDGGGGGFSLQRVLTLPFSNNWLVSLLGQFDVQRFVTEIDKTKA 120

Query: 122 GDMGHQS-LSSFLQCIGRHLCHRSLYALGISSDILLPPDDSLMISFDGY-GD-------- 181
              G  S ++S L  IG+HL  +SLYALG  S+ LL PDD+L++S+D Y GD        
Sbjct: 121 FGRGSSSTVASRLNTIGKHLKDKSLYALGFCSEFLLSPDDTLLLSYDAYKGDLDKNPRAK 180

Query: 182 ----SEFLHHDLTMEALSPGLFVDNSGKYWDVPSSLVVDLGSAASESGLSYHLSMHQNAG 241
                EF  H+LT EA+ PGLFVD  G+YWDVP S+ +DL S  +ESG SYHL +H N+G
Sbjct: 181 AIFNHEFPLHNLTAEAVWPGLFVDKHGEYWDVPLSMAIDLASLPAESGPSYHLCLHHNSG 240

Query: 242 SPSQSGNEQTRSAPFCLLPGLSAKAAFAFKKNLEIWRSNAKKLKMVQPYDIFLSTPHVSL 284
           SP +  ++     P  LLPGLS K+A +++ N+++WR    KL+  +PYD+FLS+PHV++
Sbjct: 241 SPKKLHSDTMEVPPPSLLPGLSLKSAVSYRTNMDLWRGTTPKLETCKPYDVFLSSPHVAV 300

[Close]

BLAST of HG10010459 vs. TAIR 10
Match: AT2G44640.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plasma membrane, plastid, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3769 (InterPro:IPR022244); BEST Arabidopsis thaliana protein match is: pigment defective 320 (TAIR:AT3G06960.1); Has 49 Blast hits to 48 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 233.4 bits (594), Expect = 3.6e-61
Identity = 157/485 (32.37%), Postives = 246/485 (50.72%), Query Frame = 0


Query: 2   MKKLRWAMDGQGFWDLDVSTPRTLDGSASPVPSHLHLLPLGLSRGVRLSRAKQIDFMQSF 61
           M  L  A+D   FWD +VS+P+TL+G+A  VP      PL  +R  R  R +Q+  ++  
Sbjct: 1   MANLNSAIDSV-FWDQNVSSPQTLEGTARSVPG--EPFPLDGARASRSHRIQQLSLLREG 60

Query: 62  MAAPFVPSYSPSH-----GFSLQRVFSIPFSDSGSATLLGQFNLQKFISSLKKSGVGDMG 121
                +PS +P+       FSL  +   P S++    L+GQF  +K  + + K+ + +  
Sbjct: 61  FPLGIIPSLAPASDKRLGSFSLNSLLLSPSSNNWWLGLVGQFKPKKLFADI-KADISNAE 120

Query: 122 HQSLSSFLQCIGRHLCHRSLYALGISSDILLPPDDSLMISFDGYGDSEFLH--------- 181
              L   ++   +H+  +SLY++G+ + I L    SL++S +  GD   L          
Sbjct: 121 EWDL-QVVKDTAKHIVDKSLYSIGLWTQIALGTSSSLLLSTERLGDKNGLRNKLMLVHPL 180

Query: 182 --HDLTMEALSPGLFVDNSGKYWDVPSSLVVDLGSAASESGLSYHLSMHQNAGSP---SQ 241
             HDLT+EA  P LF+DN G++WDVP SL VD+ S   ESG+ Y   +H++ G+P   + 
Sbjct: 181 EKHDLTVEAAWPDLFLDNKGRFWDVPESLNVDVSSLVPESGVRYRFGLHKSRGNPQPVNA 240

Query: 242 SGNEQTRSAPFCLLPGLSAKAAFAFKKNLEIWRSNAKK-------LKMVQPYDIFLSTPH 301
           +G E    AP  L+PGL AKAA ++K N ++WR   K+         +  PYD+ L  PH
Sbjct: 241 AGVESGSDAPTSLMPGLCAKAAVSYKVNRDLWRPQEKEGNTEEEDKPVFLPYDLRLKEPH 300

Query: 302 VSLSAIIGAAATSYFGENSVRSAAQNSLQEFKGLYMQTSRIRSTVFADVFASISFSAQYG 361
            ++S I+G++  ++     +               +   + RS + ADVF S  ++ Q G
Sbjct: 301 AAISGIVGSSLAAWITGRGM---------------LVNGKKRSPISADVFGSACYTFQKG 360

Query: 362 MFQRKYLDLTRFSARMDFHSGSKFLSGAMLLIDDISNSRHPRTESVKATLPNAKFSLQQQ 421
            F + Y DLTR  AR+D  S     + A  L    SN+      S     P      QQQ
Sbjct: 361 RFSKLYGDLTRVDARVDLPSA---FALAKKLFHASSNNSDDTLWS-----PRLNLIFQQQ 420

Query: 422 IAGPVSFRADSGVTIDLNKEGWGLLGVDEPTFALEYALQVLGSAKAIAWYSPKHREFMVE 461
           +AGP+ F+ DS   +       G   +++  ++L Y+L++L S K +AWYSPK +E M+E
Sbjct: 421 VAGPIVFKVDSQFQV-------GAARMEDVIYSLNYSLRLLESGKIVAWYSPKRKEGMIE 450

The following BLAST results are available for this feature:

BLAST of HG10010459 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875869.1	1.1e-245	92.16	protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Benincasa hispida] >XP_038...	[more]
TYK02989.1	3.4e-226	85.99	protein TRIGALACTOSYLDIACYLGLYCEROL 4 [Cucumis melo var. makuwa]	[more]
XP_008458282.1	3.4e-226	85.99	PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Cucumis melo]	[more]
XP_004138517.2	1.2e-223	84.71	protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic isoform X1 [Cucumis sativus...	[more]
XP_023548884.1	5.9e-223	84.93	protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Cucurbita pepo subsp. pepo...	[more]

BLAST of HG10010459 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M903	4.4e-120	48.03	Protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic OS=Arabidopsis thaliana OX=...	[more]

BLAST of HG10010459 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BY40	1.6e-226	85.99	Protein TRIGALACTOSYLDIACYLGLYCEROL 4 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3C837	1.6e-226	85.99	protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0K824	5.8e-224	84.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G001740 PE=4 SV=1	[more]
A0A6J1H3U0	3.5e-221	84.08	protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic OS=Cucurbita moschata OX=36...	[more]
A0A6J1KW75	1.7e-220	84.29	protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic OS=Cucurbita maxima OX=3661...	[more]

BLAST of HG10010459 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06960.1	3.1e-121	48.03	pigment defective 320	[more]
AT3G06960.2	4.9e-74	47.87	pigment defective 320	[more]
AT2G44640.1	3.6e-61	32.37	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34954:SF4	PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 4, CHLOROPLASTIC	coord: 2..461
IPR044160	Protein TRIGALACTOSYLDIACYLGLYCEROL 4-like	PANTHER	PTHR34954	EXPRESSED PROTEIN	coord: 2..461

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10010459.1	HG10010459.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034196	acylglycerol transport
biological_process	GO:1990052	ER to chloroplast lipid transport
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0008033	tRNA processing
cellular_component	GO:0009941	chloroplast envelope
molecular_function	GO:0070300	phosphatidic acid binding
molecular_function	GO:0009982	pseudouridine synthase activity
molecular_function	GO:0003723	RNA binding