HG10010457 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10010457
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	novel plant SNARE 13
Location	Chr06: 22388359 .. 22394625 (-)
RNA-Seq Expression	HG10010457
Synteny	HG10010457

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAGCAGTGTGCAGAGGAGCCCTCGGTTGGATCAGATCCATGGCGAAATTCACGACAGTTTTCGTGCCATTCCGTATGTTCCTTAACCACGCCCCTCTCTATTTAGTGATTGTTTCTGATTATATTGCCTTGTTGTTGGTTTTATATATGCATTAAACACTTCCAATGACAATGGTTGCTGTCTCGTATAATTATCAATTTTTATGTTCAGGGACCCTTCAAGCCTTTGATTCTGTTTGGTCTCTCACACCTTCATTGAAGTGTGGTTTTGTGGATTAGTAGACCTTTCTTTTTTTCTTTTTTTTTTCCCCTGCTAAATTAATGTTTACGAAAAACTATTTCATTGACCGAATGGAGGGGAGAAGAAGACCTCATTCCAACAATGGAATTTAAGAAAAGACGTCTGGTTAGCACATTGATTTGTTAGGCTAGGTCAGTGGACCCCGTTTTAAACATTTGTTTTGGGAAAAAATGGGAGTATTTCATTGATAAATGACGATGTAGTGTCTTTTAGGAAATATTGTTTTGTTTCCTTTCTTTTTGTATTCTTTGGGAGTTCTTGAGTTCTTTAAACACTCTCCTGGTTAGTTCTTTTACCTTTTGTTAACCTTTTACCTTTTGGTAATAGTTTAAGAGATGTAATTTTTCTTTAGCTTCTATTTTATTTCTTTACCTCGGGTAATAAGGTAAAGTTAGTTTGTATTCGCAGTTTTCAGCCTATAAATCAGGCTGATTACTTTCAGTTGAAGTTAATAAGAAGTTATCATTTCTTTGAGAACTTTGTCCTCACCAAATGAAACGACCCCCAAAGGTGCATTGCAAAAATGATCTTCAATCATGAAGAAAGACTATATCTTTGGCTGTTTAGAAGTGTAACCAAATCCTTTTTGAAAAAGACTATGTATGAAGATACTCCAAGTTAAAGCAAGAAAAGAAGTAGAATAAACAAAAGATTGTATGCTTTGTTGTTAATCTATGAAGAGGCGAGTATTTATTTTGAGCCATAAGTTTCAATAGAAAGTGTAGATAAAGTTCCTCGTCTTCCATAGGATTTTTCTCTCGTTTTTGAACGGGTGTCCATTAGGGGACACATCAAGAAGGGTGAAGAAATCCTTAGGTCTTGTGAAGCGGTAGTGATGTAGCCTAAATAGCCTCAAAGAGTAATCCTCCAAGAATCAAGCTTGTGAATTTTTTATTAGAATGATCATGTCAAGGGGGAAAAGACTCATATTTATAGACTTTATTATAAGTGGAGTAAAAAGGGAATTAAGGTATAATATTATTCAATTAATCTTGTACTTCCTACATCATTCTACCCCTCCAAAAAGAAAACTTGTCCTCGAGTTTAAAAAAAAAAAATGAAACAATAGGAACGAAATAAACTCGTTCGACGGAATATGACCAAACCAACCTCCTACATCTTGAACAAAAATATTTTGATCAAAAAATGTTCTGATCAAAGGGGTAATTTCGAGACAGAAAATCCAACATTGCCACCAAAAACTGAACTTTTCCATCGGCCATAAACTCAAAAAAGATGTTTTTTTTTGGGATAAAAACAATAACTTTCATTGAGAAAAAAATGAAAGAATACACGGGCATGAAAGGAAAAAAAACCCAACCCTGTAGAAAGGGGCTCCAACTATGCAAAATAATATCTACAGAATAATTACAAAAGATCTTCGAAACTGAAGCCTCGCATTGCCAGAGAATATAATCCAGATCTTCCTCCGCCTTTCGACAAAGGGTACAACAGAATGGCCCAACAAGCAAGGAGAGTTTCCTGAAAAGACGATCCATCGTATTCGCACGACCATAAAGAACTTGCCAGGTAAAGAATCTCACTTTCTTAGGAACCTTAATCCTCCAAAGGATTGAAAAGACGGACTCACCTAAGGGAGAGGGATCCACGAGACTATGAAAAAAGGGCTTGCACGAGAACCCCTCCAAAGGATTGGGGCTCTAGACCCTCACATCCCTTCTCCCTCACCTAAAAGAGTGACCCTCAAGCAAAGCAAGAAAAGAAGCCATGTCAGTCGCCTCCCTATTGGAAAGGGGGTGATGAAAGTCGAACGAGAAGGAAAAAGAGTCTCCCCGACCACACAAGGAAATTAGCAACAAGGGCTACCACCCTCGATAAACCTATCAATCCTACTTCTCGCTCTACTATTGGCCCAAGTAAACTTCCCATTCAGCAAAGGAGGATCAACTAGCCTACCACCCTTGATAAACCTATTAAAATTCTATGTAGATCTAGTGCCTTTCCCTACTGGGGCCCTCTCTTCTTGGGAACAAGTTAAGTTAAAATCACTAGCTAAACCCTAGTTCGAACGACAAAGACCAAAAGGATCCCCTAACTCATCCAAGAAAGCAACTCTCCCTCTAGATCTAGAAGGACCATACACACCCGTCACCCAACAGCTTTCGCCCCATGGTATCCTAATCAAAACTGAAAGGGAGAAGACTCCTCCAGCCACCTCCATAGCGACAGCTTACGACTATTCCACATCATCAAAATGCCTTTGGACTTCCTTACAGAATCAAGACTCTCCCGTTCCACCCTTCTTGACCTTCAGATGCTACTGACAAATTGCAGCTCAAAATCACTCCTTTTTTACTCCACCAGGACCACAATATCTGGATTCTCTTGTCTAAGAAAATTCTTAATTAAGCTTCTTTAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACACACACCACAAAAAAAAAAAAAAAAAGACCTCTAACGTTCCAAGATATGACTTTCAACATTGAGAAACCACTTTGCTGCTTCTATTGAAAGCCCTCTTCTTTTCATAGTTCACCGAGCTTTCCAATTTCTTGAGCTCTCTTTTGATCTTGTTACTCCCTTCTCCACAAGCTTTCCTCCCAACATTCTTTCTCTTGCAAGAAACCTTGCCTCCTTTAACCTTCCCATTTTCCACCCTTTGTACTCGATCGACTCCAACACTTCCCACCTTTCTTGCCCAATATCGTAAGACTCCCCATAGGAAGTCGGATAATGAACCATGAAGGATTAGAGAAATGGTCGCGCAACAAAACCCCATTATGCAACATCACTTCTCCTCCTTTTAACCCAACACCCACAACATTAGACCAAGAAGCTAAACCGAAACACCCCTCTCCAAAAGAGTAAACAGGCAAAACGACTAAGGCACCTCCAGAATTTGGAAAGTAATTCGACAATGGAAGCTAACCACAATCCCTTCCCCCCCACTCCACTCCAGATGGAACACCCGCAGCCAAAGGCATGTTTCCATCAAGCTAATTCAAAGCCGTAATCACTAATTAGAGGACCAATCACCAAAAAATCACCTGCCGAAGAGAACCCTTAAGAGAACGTGTGGAAATGAATTTGGGCCATATGAAATTGTTAAGAAACGTTTTTTTGACTTCCACCTCGACATTTAGAGTTTTTGTGTTCGATACCTCTTCCCCATCTTCTTCGTTGGATTTTTCTTCTTCACTCGAGACTACTTCCGAGTCAACATCTTCAAATTTTTCTTTTTCTTCTACTGGGTTCGTGTGATTTTTGCTCCAATCACCTTTGTCAACTACATGGGTCTCAACCGAATTTTTCCCAAATTTATCTTTAAGATTTTTTGTTTGGAAGTTTCCAACTGAGATTCTTTTGTTTTTTTCTTCTGTATACAAAATCAATTCTTTCTTAAACTCTTGTAAATGAAGTGATAATTGATCTATACTTTGAGTCATTTTCCATAATGAACGTTGGAGTTCTTTTATTGTTTTCTTTATTTTCTCCAATGCTATAGAATCAAAGTAGTCATTTTGTTGGATTCTTGAGTATGTTTCAATCTCATAGTAGGTATAGGACTGATTTGTTGATTTTCTTAAATAGGAATGAGCCTTTCTTGGTCGTGTTTCATAACCAATAGAGTAATTTCGAGCCTTGAACGTTCTTCTTGGGTTGTCTTGACGATTCTATAATTTCCTTCTTTTTTATCTTGAATATTAATTTCCCCTAAATGTATGTGGGTTGTTTGGCAACAAGTACAACTCTCAAAACTCCTTCTTGCGATTGGCATTGCGAAAAATTTCCCGGTCTTCTACCACTCGTTGGCCCATGTGGTTGCTCTGATACCAAATTGATGTAGCTTAAATAGCCTTAAAGAGTAATCCTCCAAGAATCAAGCTTGTATATCTTTTATTAGAATGATCACGTGTTTCATACAAGGGGAAAAACTCATATTTATTGAGTTTATCATAAGTGGGGGTAAAAGGGGAATTAACCTAGAATATTACTCAATCAACTCTATTCTTCCTACATCAACCAGAATGTTGTCGCCAAAGGACATTGGTTAAATAGATGAATCTGAGTCTCTTGGCCACTCAAACATAAGTGGTACCAACTAGTAGGGATGTACATTCTCTCTCTGTGGGGATGGGGTCTGGGGACTTGCCCGCAACAAGGCGGGGATTGAGGGAGGGAGTGGGGATATTTTTTCTCCATAAGCTAAATGGGGAAGGGGACGAATCCCCGCCCTATTTACCCAGCTTTATTGTTTAATGAATTAGACCCCGCCACTTCCCCCCCCAGCCATTTACCCCTTTTTATATAATAAATTTATTATTGTGATTATATATACATAATATTTAAAATTTGAGTTTTGTTGTTTAATGACTTGGATAAGTTTATATGTCCAAACTATAAAATTGAACACTTGGACTATGTATATCGAGGATTAGATAATTTGATACGCTGGTTATTTTGTTTATGTTAGCAGGTTTAACAAATTTATCTTTAAATGAAGATTCTCCATGTGAAATTTACCATTTAAATGATTTTTTTTAGTGAAACACTCGGTGTATAATTAAAAAAACTTAAAATAAAATTTCTTAATTTATAGAACTTGAATGAGAACTATGGATATCCAATTGTTCATTTATATTCATGGATTTATGGATGTAGCCTCTCTATCTCTGTAATTATACTTTTTTTGGGTGACTAAACTTGGTTGCACGGTCTAACATGTTCAGTGATCAAAGCAGTTGAGAATTGAATTGCTTGAAATGTGAGTTTCTCATGTTTTATAGCTGGAACGCAGGTATACGAATACTCCTGCTAATAAGAGGGTAGAGCTGTTTGATGAGAGAGGCATTAATGAATCTACGACTGATGATAATGTTCAGATGACATCATGTAAGACTTTATATACGTGTGAAATCCATAAGCTTGTAGCTAAATATGCATATGTCCCTTTCGGAGGAGTTTCTACCCGTGGAACCTGTAGGGCCTTCTATTTTTGAATTTGGAATTTTTGTTTTAGAACTCTTTGTTTCCTAATATTACCAATCTCAAGTTGAAATACCATGGAAGAATCTCCAACCACAGTAATTGTAATAAGAACTTCGTTTCAATTTTGTTACTCTGTTCTTATTGGCCTGAATGTTCTATTGCCCAGTTTTGTGAAATTCTTCATTTCTTCATTTTCTCATCAGCCCTTGTCCCCCCCAAAAAAAAAAAAAAAAAAACATACACACACACACACAAAATTTGTTCACAATAACTATGCATTTTAATTACTATTATATGTCTTCAGTTTTGATATGTTTTGCGTGATATAAATCTTATAATATAATAAACTTGACTTGAAGGAACTAGAATTTTGTTCCCTATTTTAGAATAATTAAATTAAAGGATAGGTTTGCATTGCAATCCCAGGCTTGAGGACGTGACAATTGAAATGTAAGTAAAAAGAAATAGTGGCTTTGGTTCAAAATTTCTATCTTCCAGATGTGTTGAAGTAATAAATATTAAATACGGTTTATTGTGGAGAGGTAAATTTCTATATTGCTGAATTATAGGAGGTAGAAGGAAGTAAAAGTATGATCATACTTGTAGGAAGTATGCATTCTTTGAGTTTTTTTGATGTATATGCGAGTGTTGAAAAGTGATAGAATTTTTAAGTATCCTCTTTTCTTCTATATATTTCACATTCTATTGGCATGTCTTTGTGCTGTAGCAATAATAAGTCAAGAATTGAACAATGTTGAGAAGAAGACAATGGATGATAGTGATCCTGCGATTGAAAGCTCTAAAATGGTGACCAGTTTTTTTTATAATGCACATGCTTTCTCATTTTGTTTTGGTTTTGTTTTGTTTTGTTTTTGTTCTTTTACCGTTAGTCCTAATGCAAAGTATGATCTTTAGGTAGTTGAACAACCAGTTGAAATGGGAAGGCAATCTGCTTTTACATTGGAAGGCCAAGTAAGTATATAA

mRNA sequence

ATGGCTAGCAGTGTGCAGAGGAGCCCTCGGTTGGATCAGATCCATGGCGAAATTCACGACAGTTTTCGTGCCATTCCGTATACGAATACTCCTGCTAATAAGAGGGTAGAGCTGTTTGATGAGAGAGGCATTAATGAATCTACGACTGATGATAATGTTCAGATGACATCATGTAAGACTTTATATACGTGTGAAATCCATAAGCTTGTAGCTAAATATGCATATGTCCCTTTCGGAGGAGTTTCTACCCGTGGAACCTCAATAATAAGTCAAGAATTGAACAATGTTGAGAAGAAGACAATGGATGATAGTGATCCTGCGATTGAAAGCTCTAAAATGGTAGTTGAACAACCAGTTGAAATGGGAAGGCAATCTGCTTTTACATTGGAAGGCCAAGTAAGTATATAA

Coding sequence (CDS)

ATGGCTAGCAGTGTGCAGAGGAGCCCTCGGTTGGATCAGATCCATGGCGAAATTCACGACAGTTTTCGTGCCATTCCGTATACGAATACTCCTGCTAATAAGAGGGTAGAGCTGTTTGATGAGAGAGGCATTAATGAATCTACGACTGATGATAATGTTCAGATGACATCATGTAAGACTTTATATACGTGTGAAATCCATAAGCTTGTAGCTAAATATGCATATGTCCCTTTCGGAGGAGTTTCTACCCGTGGAACCTCAATAATAAGTCAAGAATTGAACAATGTTGAGAAGAAGACAATGGATGATAGTGATCCTGCGATTGAAAGCTCTAAAATGGTAGTTGAACAACCAGTTGAAATGGGAAGGCAATCTGCTTTTACATTGGAAGGCCAAGTAAGTATATAA

Protein sequence

MASSVQRSPRLDQIHGEIHDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSCKTLYTCEIHKLVAKYAYVPFGGVSTRGTSIISQELNNVEKKTMDDSDPAIESSKMVVEQPVEMGRQSAFTLEGQVSI

Homology

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BLAST of HG10010457 vs. NCBI nr
Match: XP_008458283.1 (PREDICTED: uncharacterized protein LOC103497748 isoform X1 [Cucumis melo])

HSP 1 Score: 171.4 bits (433), Expect = 5.3e-39
Identity = 95/134 (70.90%), Postives = 99/134 (73.88%), Query Frame = 0


Query: 1   MASSVQRSPRLDQIHGEIHDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSCKT 60
           MASSVQRSP+LDQIHGEI DSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTS   
Sbjct: 1   MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTS--- 60

Query: 61  LYTCEIHKLVAKYAYVPFGGVSTRGTSIISQELNNVEKKTMDDSDPAIESSKMVVEQPVE 120
                                     SI SQELNNV KK MDDSDPAI+SSKMVVEQ +E
Sbjct: 61  --------------------------SITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIE 105

Query: 121 MGRQSAFTLEGQVS 135
           MGRQSAFTLEGQ +
Sbjct: 121 MGRQSAFTLEGQAT 105

[Close]

BLAST of HG10010457 vs. NCBI nr
Match: XP_004138593.1 (uncharacterized protein LOC101203713 isoform X1 [Cucumis sativus] >KGN45626.1 hypothetical protein Csa_005598 [Cucumis sativus])

HSP 1 Score: 170.6 bits (431), Expect = 9.1e-39
Identity = 95/134 (70.90%), Postives = 98/134 (73.13%), Query Frame = 0


Query: 1   MASSVQRSPRLDQIHGEIHDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSCKT 60
           MASSVQRSPRLDQIHGEI DSFR IPYTNTPANKRVELFDERGINES+TDDNVQMT    
Sbjct: 1   MASSVQRSPRLDQIHGEIRDSFRPIPYTNTPANKRVELFDERGINESSTDDNVQMT---- 60

Query: 61  LYTCEIHKLVAKYAYVPFGGVSTRGTSIISQELNNVEKKTMDDSDPAIESSKMVVEQPVE 120
                                     SIISQELNNV KK MDDSDPAIESSKMVVEQ +E
Sbjct: 61  -------------------------PSIISQELNNVGKKIMDDSDPAIESSKMVVEQTIE 105

Query: 121 MGRQSAFTLEGQVS 135
           MGRQSAFTLEGQ +
Sbjct: 121 MGRQSAFTLEGQAT 105

[Close]

BLAST of HG10010457 vs. NCBI nr
Match: XP_008458284.1 (PREDICTED: uncharacterized protein LOC103497748 isoform X2 [Cucumis melo])

HSP 1 Score: 169.5 bits (428), Expect = 2.0e-38
Identity = 94/131 (71.76%), Postives = 97/131 (74.05%), Query Frame = 0


Query: 1   MASSVQRSPRLDQIHGEIHDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSCKT 60
           MASSVQRSP+LDQIHGEI DSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTS   
Sbjct: 1   MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTS--- 60

Query: 61  LYTCEIHKLVAKYAYVPFGGVSTRGTSIISQELNNVEKKTMDDSDPAIESSKMVVEQPVE 120
                                     SI SQELNNV KK MDDSDPAI+SSKMVVEQ +E
Sbjct: 61  --------------------------SITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIE 102

Query: 121 MGRQSAFTLEG 132
           MGRQSAFTLEG
Sbjct: 121 MGRQSAFTLEG 102

[Close]

BLAST of HG10010457 vs. NCBI nr
Match: XP_038906599.1 (uncharacterized protein LOC120092551 isoform X1 [Benincasa hispida])

HSP 1 Score: 168.7 bits (426), Expect = 3.4e-38
Identity = 94/134 (70.15%), Postives = 99/134 (73.88%), Query Frame = 0


Query: 1   MASSVQRSPRLDQIHGEIHDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSCKT 60
           MASSVQRSPRLDQIHGEI DSFRA+PY NTPANKRVELFDERGINESTTDDNVQ+TS   
Sbjct: 1   MASSVQRSPRLDQIHGEIRDSFRALPYMNTPANKRVELFDERGINESTTDDNVQITS--- 60

Query: 61  LYTCEIHKLVAKYAYVPFGGVSTRGTSIISQELNNVEKKTMDDSDPAIESSKMVVEQPVE 120
                                     SIISQELNNV +KTMDDSDPAIESSKMVVEQ +E
Sbjct: 61  --------------------------SIISQELNNVGEKTMDDSDPAIESSKMVVEQTME 105

Query: 121 MGRQSAFTLEGQVS 135
           MGRQSAFTLE Q +
Sbjct: 121 MGRQSAFTLEDQAT 105

[Close]

BLAST of HG10010457 vs. NCBI nr
Match: XP_022959325.1 (uncharacterized protein LOC111460335 isoform X1 [Cucurbita moschata] >XP_022959326.1 uncharacterized protein LOC111460335 isoform X1 [Cucurbita moschata] >KAG6575156.1 putative plant SNARE 12, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 152.1 bits (383), Expect = 3.3e-33
Identity = 83/134 (61.94%), Postives = 93/134 (69.40%), Query Frame = 0


Query: 1   MASSVQRSPRLDQIHGEIHDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSCKT 60
           MASSVQRSPRLDQIHGE+ DSFR + YTN PAN+RVE+FDERGINE TTDDN+QMTS   
Sbjct: 1   MASSVQRSPRLDQIHGEVRDSFRVLSYTNAPANRRVEMFDERGINEPTTDDNIQMTS--- 60

Query: 61  LYTCEIHKLVAKYAYVPFGGVSTRGTSIISQELNNVEKKTMDDSDPAIESSKMVVEQPVE 120
                                     SI SQEL NV KKTMDD+DPAIESSKMVVEQ VE
Sbjct: 61  --------------------------SITSQELTNVGKKTMDDTDPAIESSKMVVEQTVE 105

Query: 121 MGRQSAFTLEGQVS 135
           +GRQS+ T +GQ +
Sbjct: 121 VGRQSSSTWDGQAT 105

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BLAST of HG10010457 vs. ExPASy Swiss-Prot
Match: Q9LRP1 (Novel plant SNARE 13 OS=Arabidopsis thaliana OX=3702 GN=NPSN13 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.6e-08
Identity = 59/182 (32.42%), Postives = 82/182 (45.05%), Query Frame = 0


Query: 1   MASSVQRSPRLDQIHGEIHDSFRAIP---------YTNTPANKRV--------------- 60
           MAS++  SP+L+QIHGEI D FRA+            +T  +K++               
Sbjct: 1   MASNLPMSPQLEQIHGEIRDHFRALANGFQRLDKIKDSTRQSKQLEELTDKMRECKRLVK 60

Query: 61  ----ELFDERGINESTTDDNVQMTSCKTLYTCEIHKLVA------------KYAYVPFG- 120
               EL DE   N  + + N Q+   K     E++  VA            K      G 
Sbjct: 61  EFDRELKDEEARN--SPEVNKQLNDEKQSMIKELNSYVALRKTYMSTLGNKKVELFDMGA 120

Query: 121 GVSTRGT---------SIISQELNNVEKKTMDDSDPAIESSKMVVEQPVEMGRQSAFTLE 133
           GVS   T         S+ +QEL +   K MD++D AIE SK VVEQ +E+G Q+A  L+
Sbjct: 121 GVSGEPTAEENVQVASSMSNQELVDAGMKRMDETDQAIERSKQVVEQTLEVGTQTAANLK 180

[Close]

BLAST of HG10010457 vs. ExPASy Swiss-Prot
Match: Q9LNH6 (Novel plant SNARE 12 OS=Arabidopsis thaliana OX=3702 GN=NPSN12 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.6e-06
Identity = 40/108 (37.04%), Postives = 55/108 (50.93%), Query Frame = 0


Query: 27  YTNTPANKRVELFDE-RGIN-ESTTDDNVQMTSCKTLYTCEIHKLVAKYAYVPFGGVSTR 86
           Y NT  NK+VELFD   G++ E T ++NVQM S                           
Sbjct: 102 YLNTLGNKKVELFDTGAGVSGEPTAEENVQMAS--------------------------- 161

Query: 87  GTSIISQELNNVEKKTMDDSDPAIESSKMVVEQPVEMGRQSAFTLEGQ 133
             ++ +QEL +   K MD++D AIE SK VV Q +E+G Q+A  L+GQ
Sbjct: 162 --TMSNQELVDAGMKRMDETDQAIERSKQVVHQTLEVGTQTASNLKGQ 180

[Close]

BLAST of HG10010457 vs. ExPASy TrEMBL
Match: A0A1S3C8R6 (uncharacterized protein LOC103497748 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497748 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.6e-39
Identity = 95/134 (70.90%), Postives = 99/134 (73.88%), Query Frame = 0


Query: 1   MASSVQRSPRLDQIHGEIHDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSCKT 60
           MASSVQRSP+LDQIHGEI DSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTS   
Sbjct: 1   MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTS--- 60

Query: 61  LYTCEIHKLVAKYAYVPFGGVSTRGTSIISQELNNVEKKTMDDSDPAIESSKMVVEQPVE 120
                                     SI SQELNNV KK MDDSDPAI+SSKMVVEQ +E
Sbjct: 61  --------------------------SITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIE 105

Query: 121 MGRQSAFTLEGQVS 135
           MGRQSAFTLEGQ +
Sbjct: 121 MGRQSAFTLEGQAT 105

[Close]

BLAST of HG10010457 vs. ExPASy TrEMBL
Match: A0A0A0KCW9 (SWIM-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G001720 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 4.4e-39
Identity = 95/134 (70.90%), Postives = 98/134 (73.13%), Query Frame = 0


Query: 1   MASSVQRSPRLDQIHGEIHDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSCKT 60
           MASSVQRSPRLDQIHGEI DSFR IPYTNTPANKRVELFDERGINES+TDDNVQMT    
Sbjct: 1   MASSVQRSPRLDQIHGEIRDSFRPIPYTNTPANKRVELFDERGINESSTDDNVQMT---- 60

Query: 61  LYTCEIHKLVAKYAYVPFGGVSTRGTSIISQELNNVEKKTMDDSDPAIESSKMVVEQPVE 120
                                     SIISQELNNV KK MDDSDPAIESSKMVVEQ +E
Sbjct: 61  -------------------------PSIISQELNNVGKKIMDDSDPAIESSKMVVEQTIE 105

Query: 121 MGRQSAFTLEGQVS 135
           MGRQSAFTLEGQ +
Sbjct: 121 MGRQSAFTLEGQAT 105

[Close]

BLAST of HG10010457 vs. ExPASy TrEMBL
Match: A0A1S3C712 (uncharacterized protein LOC103497748 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497748 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 9.8e-39
Identity = 94/131 (71.76%), Postives = 97/131 (74.05%), Query Frame = 0


Query: 1   MASSVQRSPRLDQIHGEIHDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSCKT 60
           MASSVQRSP+LDQIHGEI DSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTS   
Sbjct: 1   MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTS--- 60

Query: 61  LYTCEIHKLVAKYAYVPFGGVSTRGTSIISQELNNVEKKTMDDSDPAIESSKMVVEQPVE 120
                                     SI SQELNNV KK MDDSDPAI+SSKMVVEQ +E
Sbjct: 61  --------------------------SITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIE 102

Query: 121 MGRQSAFTLEG 132
           MGRQSAFTLEG
Sbjct: 121 MGRQSAFTLEG 102

[Close]

BLAST of HG10010457 vs. ExPASy TrEMBL
Match: A0A6J1H5Z5 (uncharacterized protein LOC111460335 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460335 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.6e-33
Identity = 83/134 (61.94%), Postives = 93/134 (69.40%), Query Frame = 0


Query: 1   MASSVQRSPRLDQIHGEIHDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSCKT 60
           MASSVQRSPRLDQIHGE+ DSFR + YTN PAN+RVE+FDERGINE TTDDN+QMTS   
Sbjct: 1   MASSVQRSPRLDQIHGEVRDSFRVLSYTNAPANRRVEMFDERGINEPTTDDNIQMTS--- 60

Query: 61  LYTCEIHKLVAKYAYVPFGGVSTRGTSIISQELNNVEKKTMDDSDPAIESSKMVVEQPVE 120
                                     SI SQEL NV KKTMDD+DPAIESSKMVVEQ VE
Sbjct: 61  --------------------------SITSQELTNVGKKTMDDTDPAIESSKMVVEQTVE 105

Query: 121 MGRQSAFTLEGQVS 135
           +GRQS+ T +GQ +
Sbjct: 121 VGRQSSSTWDGQAT 105

[Close]

BLAST of HG10010457 vs. ExPASy TrEMBL
Match: A0A6J1KW10 (uncharacterized protein LOC111499213 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499213 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 4.7e-33
Identity = 81/134 (60.45%), Postives = 93/134 (69.40%), Query Frame = 0


Query: 1   MASSVQRSPRLDQIHGEIHDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSCKT 60
           MASSVQRSPRLDQIHGE+ DSFR + YTN PAN+RV++FDERGINE TTDDN+QMTS   
Sbjct: 1   MASSVQRSPRLDQIHGEVRDSFRVLSYTNAPANRRVDMFDERGINEPTTDDNIQMTS--- 60

Query: 61  LYTCEIHKLVAKYAYVPFGGVSTRGTSIISQELNNVEKKTMDDSDPAIESSKMVVEQPVE 120
                                     SI SQEL N+ KKTMDD+DPAIESSKMVVEQ VE
Sbjct: 61  --------------------------SITSQELTNIGKKTMDDTDPAIESSKMVVEQTVE 105

Query: 121 MGRQSAFTLEGQVS 135
           +GRQS+ T +GQ +
Sbjct: 121 VGRQSSSTWDGQAT 105

[Close]

BLAST of HG10010457 vs. TAIR 10
Match: AT3G17440.1 (novel plant snare 13 )

HSP 1 Score: 58.5 bits (140), Expect = 4.7e-09
Identity = 59/182 (32.42%), Postives = 82/182 (45.05%), Query Frame = 0


Query: 1   MASSVQRSPRLDQIHGEIHDSFRAIP---------YTNTPANKRV--------------- 60
           MAS++  SP+L+QIHGEI D FRA+            +T  +K++               
Sbjct: 1   MASNLPMSPQLEQIHGEIRDHFRALANGFQRLDKIKDSTRQSKQLEELTDKMRECKRLVK 60

Query: 61  ----ELFDERGINESTTDDNVQMTSCKTLYTCEIHKLVA------------KYAYVPFG- 120
               EL DE   N  + + N Q+   K     E++  VA            K      G 
Sbjct: 61  EFDRELKDEEARN--SPEVNKQLNDEKQSMIKELNSYVALRKTYMSTLGNKKVELFDMGA 120

Query: 121 GVSTRGT---------SIISQELNNVEKKTMDDSDPAIESSKMVVEQPVEMGRQSAFTLE 133
           GVS   T         S+ +QEL +   K MD++D AIE SK VVEQ +E+G Q+A  L+
Sbjct: 121 GVSGEPTAEENVQVASSMSNQELVDAGMKRMDETDQAIERSKQVVEQTLEVGTQTAANLK 180

[Close]

BLAST of HG10010457 vs. TAIR 10
Match: AT3G17440.2 (novel plant snare 13 )

HSP 1 Score: 58.5 bits (140), Expect = 4.7e-09
Identity = 59/182 (32.42%), Postives = 82/182 (45.05%), Query Frame = 0


Query: 1   MASSVQRSPRLDQIHGEIHDSFRAIP---------YTNTPANKRV--------------- 60
           MAS++  SP+L+QIHGEI D FRA+            +T  +K++               
Sbjct: 1   MASNLPMSPQLEQIHGEIRDHFRALANGFQRLDKIKDSTRQSKQLEELTDKMRECKRLVK 60

Query: 61  ----ELFDERGINESTTDDNVQMTSCKTLYTCEIHKLVA------------KYAYVPFG- 120
               EL DE   N  + + N Q+   K     E++  VA            K      G 
Sbjct: 61  EFDRELKDEEARN--SPEVNKQLNDEKQSMIKELNSYVALRKTYMSTLGNKKVELFDMGA 120

Query: 121 GVSTRGT---------SIISQELNNVEKKTMDDSDPAIESSKMVVEQPVEMGRQSAFTLE 133
           GVS   T         S+ +QEL +   K MD++D AIE SK VVEQ +E+G Q+A  L+
Sbjct: 121 GVSGEPTAEENVQVASSMSNQELVDAGMKRMDETDQAIERSKQVVEQTLEVGTQTAANLK 180

[Close]

BLAST of HG10010457 vs. TAIR 10
Match: AT1G48240.1 (novel plant snare 12 )

HSP 1 Score: 53.9 bits (128), Expect = 1.2e-07
Identity = 40/108 (37.04%), Postives = 55/108 (50.93%), Query Frame = 0


Query: 27  YTNTPANKRVELFDE-RGIN-ESTTDDNVQMTSCKTLYTCEIHKLVAKYAYVPFGGVSTR 86
           Y NT  NK+VELFD   G++ E T ++NVQM S                           
Sbjct: 102 YLNTLGNKKVELFDTGAGVSGEPTAEENVQMAS--------------------------- 161

Query: 87  GTSIISQELNNVEKKTMDDSDPAIESSKMVVEQPVEMGRQSAFTLEGQ 133
             ++ +QEL +   K MD++D AIE SK VV Q +E+G Q+A  L+GQ
Sbjct: 162 --TMSNQELVDAGMKRMDETDQAIERSKQVVHQTLEVGTQTASNLKGQ 180

The following BLAST results are available for this feature:

BLAST of HG10010457 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458283.1	5.3e-39	70.90	PREDICTED: uncharacterized protein LOC103497748 isoform X1 [Cucumis melo]	[more]
XP_004138593.1	9.1e-39	70.90	uncharacterized protein LOC101203713 isoform X1 [Cucumis sativus] >KGN45626.1 hy...	[more]
XP_008458284.1	2.0e-38	71.76	PREDICTED: uncharacterized protein LOC103497748 isoform X2 [Cucumis melo]	[more]
XP_038906599.1	3.4e-38	70.15	uncharacterized protein LOC120092551 isoform X1 [Benincasa hispida]	[more]
XP_022959325.1	3.3e-33	61.94	uncharacterized protein LOC111460335 isoform X1 [Cucurbita moschata] >XP_0229593...	[more]

BLAST of HG10010457 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LRP1	6.6e-08	32.42	Novel plant SNARE 13 OS=Arabidopsis thaliana OX=3702 GN=NPSN13 PE=1 SV=1	[more]
Q9LNH6	1.6e-06	37.04	Novel plant SNARE 12 OS=Arabidopsis thaliana OX=3702 GN=NPSN12 PE=2 SV=1	[more]

BLAST of HG10010457 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C8R6	2.6e-39	70.90	uncharacterized protein LOC103497748 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KCW9	4.4e-39	70.90	SWIM-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G001720 P...	[more]
A0A1S3C712	9.8e-39	71.76	uncharacterized protein LOC103497748 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1H5Z5	1.6e-33	61.94	uncharacterized protein LOC111460335 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KW10	4.7e-33	60.45	uncharacterized protein LOC111499213 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of HG10010457 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17440.1	4.7e-09	32.42	novel plant snare 13	[more]
AT3G17440.2	4.7e-09	32.42	novel plant snare 13	[more]
AT1G48240.1	1.2e-07	37.04	novel plant snare 12	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21230	VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED	coord: 88..133
None	No IPR available	PANTHER	PTHR21230:SF82	BNACNNG50640D PROTEIN	coord: 88..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10010457.1	HG10010457.1	mRNA