HG10010421 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10010421
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	transcription factor bHLH147-like
Location	Chr06: 22056335 .. 22056946 (+)
RNA-Seq Expression	HG10010421
Synteny	HG10010421

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCATCTGTTCTTTCGAATTCCGATCGCGCGCGGGAGTCTTCAAGGAAGCAAAAGAAGAAGAAAAGCCATGGCAACAGAGATCATCATCAAAACCAGAATCATATTAAATGGAAATCTCAAGCCCAGCAGGAAATTTACTCGTCCAAGCTGGTACGAGCATTGAACCAAGTGAGACTCAGTCCTTCGAATGAGGCGCCGCCGCGCCGCGGCAGAGCTGTACGCGAGGCTGCCGATAGAGTCCTCGCAGTTGCCGCCAAGGGGAGAACCAGGTGGAGTCGAGCCATATTAACGAACAGGTTGAAGCTCAAGTTCAGGAAGCCGAAGAGACAGAGATCAGCATCCACCGCTGGAAATAACCGCTCAAAGAAACCCAGAGTCACCGTATTGCGGTTGAGAGGGAAATCCTTACCGGCGGTACAAAGGAAAGTAAGGTTTCTTGGACGGCTAGTTCCCGGTTGCCGGAAAGAACCGCTGCCGGTTATTCTGGAAGAAGCTACCGATTACATAGCTGCACTTGAAATGCAAGTTCGAGCCATGAGTGCCCTTGCTGAGTTGCTCTCGGGCTCAACTTCTGCTGCAGGCTCTGGTTCGACCCCTCCAAGCTGA

mRNA sequence

ATGGCGTCATCTGTTCTTTCGAATTCCGATCGCGCGCGGGAGTCTTCAAGGAAGCAAAAGAAGAAGAAAAGCCATGGCAACAGAGATCATCATCAAAACCAGAATCATATTAAATGGAAATCTCAAGCCCAGCAGGAAATTTACTCGTCCAAGCTGGTACGAGCATTGAACCAAGTGAGACTCAGTCCTTCGAATGAGGCGCCGCCGCGCCGCGGCAGAGCTGTACGCGAGGCTGCCGATAGAGTCCTCGCAGTTGCCGCCAAGGGGAGAACCAGGTGGAGTCGAGCCATATTAACGAACAGGTTGAAGCTCAAGTTCAGGAAGCCGAAGAGACAGAGATCAGCATCCACCGCTGGAAATAACCGCTCAAAGAAACCCAGAGTCACCGTATTGCGGTTGAGAGGGAAATCCTTACCGGCGGTACAAAGGAAAGTAAGGTTTCTTGGACGGCTAGTTCCCGGTTGCCGGAAAGAACCGCTGCCGGTTATTCTGGAAGAAGCTACCGATTACATAGCTGCACTTGAAATGCAAGTTCGAGCCATGAGTGCCCTTGCTGAGTTGCTCTCGGGCTCAACTTCTGCTGCAGGCTCTGGTTCGACCCCTCCAAGCTGA

Coding sequence (CDS)

ATGGCGTCATCTGTTCTTTCGAATTCCGATCGCGCGCGGGAGTCTTCAAGGAAGCAAAAGAAGAAGAAAAGCCATGGCAACAGAGATCATCATCAAAACCAGAATCATATTAAATGGAAATCTCAAGCCCAGCAGGAAATTTACTCGTCCAAGCTGGTACGAGCATTGAACCAAGTGAGACTCAGTCCTTCGAATGAGGCGCCGCCGCGCCGCGGCAGAGCTGTACGCGAGGCTGCCGATAGAGTCCTCGCAGTTGCCGCCAAGGGGAGAACCAGGTGGAGTCGAGCCATATTAACGAACAGGTTGAAGCTCAAGTTCAGGAAGCCGAAGAGACAGAGATCAGCATCCACCGCTGGAAATAACCGCTCAAAGAAACCCAGAGTCACCGTATTGCGGTTGAGAGGGAAATCCTTACCGGCGGTACAAAGGAAAGTAAGGTTTCTTGGACGGCTAGTTCCCGGTTGCCGGAAAGAACCGCTGCCGGTTATTCTGGAAGAAGCTACCGATTACATAGCTGCACTTGAAATGCAAGTTCGAGCCATGAGTGCCCTTGCTGAGTTGCTCTCGGGCTCAACTTCTGCTGCAGGCTCTGGTTCGACCCCTCCAAGCTGA

Protein sequence

MASSVLSNSDRARESSRKQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVRLSPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSASTAGNNRSKKPRVTVLRLRGKSLPAVQRKVRFLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMSALAELLSGSTSAAGSGSTPPS

Homology

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BLAST of HG10010421 vs. NCBI nr
Match: XP_038875658.1 (transcription factor bHLH147-like [Benincasa hispida])

HSP 1 Score: 343.6 bits (880), Expect = 1.2e-90
Identity = 191/203 (94.09%), Postives = 194/203 (95.57%), Query Frame = 0


Query: 1   MASSVLSNSDRARESSRKQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVR 60
           MASSVLSNSDR RESSRKQKKKKSH NRD+HQNQNHIKWKSQAQQEIYSSKLVRALNQVR
Sbjct: 1   MASSVLSNSDRVRESSRKQKKKKSHSNRDNHQNQNHIKWKSQAQQEIYSSKLVRALNQVR 60

Query: 61  LSPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSASTAGN 120
           LSPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPK+QRS ST GN
Sbjct: 61  LSPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKKQRSVSTVGN 120

Query: 121 NRSKKPRVTVLRLRGKSLPAVQRKVRFLGRLVPGCRKEPLPVILEEATDYIAALEMQVRA 180
           NRSKKPRV+VLRLRGK LPAVQRKVR LGRLVPGCRKEPLPVILEEATDYIAALEMQVRA
Sbjct: 121 NRSKKPRVSVLRLRGKGLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRA 180

Query: 181 MSALAELLSGSTSAAGSGSTPPS 204
           MSALAELLS STSAAGS S PPS
Sbjct: 181 MSALAELLSASTSAAGSSSIPPS 203

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BLAST of HG10010421 vs. NCBI nr
Match: XP_022959317.1 (transcription factor bHLH147-like [Cucurbita moschata] >XP_023548462.1 transcription factor bHLH147-like [Cucurbita pepo subsp. pepo] >KAG6575121.1 Transcription factor basic helix-loop-helix 147, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013690.1 Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 342.0 bits (876), Expect = 3.4e-90
Identity = 193/203 (95.07%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 1   MASSVLSNSDRARESSRKQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVR 60
           MASSV SNSDRARESSR+QKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVR
Sbjct: 1   MASSVHSNSDRARESSRRQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVR 60

Query: 61  LSPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSASTAGN 120
           LSP NEA PRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSASTAGN
Sbjct: 61  LSPPNEA-PRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSASTAGN 120

Query: 121 NRSKKPRVTVLRLRGKSLPAVQRKVRFLGRLVPGCRKEPLPVILEEATDYIAALEMQVRA 180
           NRSKKPRV+VLRLRGKSLPAVQRKVR LGRLVPGCRKEPLPVILEEATDYIAALEMQVRA
Sbjct: 121 NRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRA 180

Query: 181 MSALAELLSGSTSAAGSGSTPPS 204
           MSALAELLS STSAAGS S PP+
Sbjct: 181 MSALAELLSASTSAAGSSSAPPN 202

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BLAST of HG10010421 vs. NCBI nr
Match: XP_004148798.1 (transcription factor bHLH147 [Cucumis sativus] >XP_004148799.1 transcription factor bHLH147 [Cucumis sativus] >KGN47455.1 hypothetical protein Csa_021776 [Cucumis sativus])

HSP 1 Score: 339.7 bits (870), Expect = 1.7e-89
Identity = 196/206 (95.15%), Postives = 198/206 (96.12%), Query Frame = 0


Query: 1   MASSVLSNSDRARE-SSRKQKKKKSHGNRDHHQNQN-HIKWKSQAQQEIYSSKLVRALNQ 60
           MASSVLSNSDRARE SSRKQKKKKSHGNRDHHQNQN HIKWKSQAQQEIYSSKLVRALNQ
Sbjct: 1   MASSVLSNSDRARESSSRKQKKKKSHGNRDHHQNQNHHIKWKSQAQQEIYSSKLVRALNQ 60

Query: 61  VRLSPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRK-PKRQRSAST 120
           VRL PSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRK PKRQRS ST
Sbjct: 61  VRLGPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKAPKRQRSTST 120

Query: 121 AGNNRSKKPRVTVLRLRGKSLPAVQRKVRFLGRLVPGCRKEPLPVILEEATDYIAALEMQ 180
           AGNNRSKKPRV+VLRLRGKSLPAVQRKVR LGRLVPGCRKEPLPVILEEATDYIAALEMQ
Sbjct: 121 AGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ 180

Query: 181 VRAMSALAELLSGSTSAAGSGSTPPS 204
           VRAMSALAELLS STSAAGS S+PPS
Sbjct: 181 VRAMSALAELLSASTSAAGSSSSPPS 206

[Close]

BLAST of HG10010421 vs. NCBI nr
Match: XP_023006264.1 (transcription factor bHLH147-like [Cucurbita maxima])

HSP 1 Score: 338.2 bits (866), Expect = 4.9e-89
Identity = 191/203 (94.09%), Postives = 194/203 (95.57%), Query Frame = 0


Query: 1   MASSVLSNSDRARESSRKQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVR 60
           MASSV SNSDRARESSR+QKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVR
Sbjct: 1   MASSVHSNSDRARESSRRQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVR 60

Query: 61  LSPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSASTAGN 120
           LSP NE  PRRGRAVREAADRVLAVAAKGRTRWSRAIL NRLKLKFRKPKRQRSASTAGN
Sbjct: 61  LSPPNEG-PRRGRAVREAADRVLAVAAKGRTRWSRAILKNRLKLKFRKPKRQRSASTAGN 120

Query: 121 NRSKKPRVTVLRLRGKSLPAVQRKVRFLGRLVPGCRKEPLPVILEEATDYIAALEMQVRA 180
           NRSKKPRV+VLRLRGKSLPAVQRKVR LGRLVPGCRKEPLPVILEEATDYIAALEMQVRA
Sbjct: 121 NRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRA 180

Query: 181 MSALAELLSGSTSAAGSGSTPPS 204
           MSALAELLS STSAAGS S PP+
Sbjct: 181 MSALAELLSASTSAAGSSSAPPN 202

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BLAST of HG10010421 vs. NCBI nr
Match: XP_008458338.1 (PREDICTED: transcription factor bHLH147-like [Cucumis melo] >XP_008458339.1 PREDICTED: transcription factor bHLH147-like [Cucumis melo] >TYK02962.1 transcription factor bHLH147-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 336.7 bits (862), Expect = 1.4e-88
Identity = 194/206 (94.17%), Postives = 199/206 (96.60%), Query Frame = 0


Query: 1   MASSVLSNSDRARE-SSRKQKKKKSHGNRDHHQNQN-HIKWKSQAQQEIYSSKLVRALNQ 60
           MASSVLSNSDRARE SSRKQKKKKSHGNRDHHQ+QN HIKWKSQAQQEIYSSKLVRALNQ
Sbjct: 1   MASSVLSNSDRARESSSRKQKKKKSHGNRDHHQSQNHHIKWKSQAQQEIYSSKLVRALNQ 60

Query: 61  VRLSPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRK-PKRQRSAST 120
           VRLSPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRK P+RQRS S+
Sbjct: 61  VRLSPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKAPRRQRSTSS 120

Query: 121 AGNNRSKKPRVTVLRLRGKSLPAVQRKVRFLGRLVPGCRKEPLPVILEEATDYIAALEMQ 180
           AGNNRSKKPRV+VLRLRGKSLPAVQRKVR LGRLVPGCRKEPLPVILEEATDYIAALEMQ
Sbjct: 121 AGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ 180

Query: 181 VRAMSALAELLSGSTSAAGSGSTPPS 204
           VRAMSALAELLS STSAAGS S+PPS
Sbjct: 181 VRAMSALAELLSASTSAAGSSSSPPS 206

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BLAST of HG10010421 vs. ExPASy Swiss-Prot
Match: Q9LSN7 (Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 5.6e-43
Identity = 110/196 (56.12%), Postives = 140/196 (71.43%), Query Frame = 0


Query: 7   SNSDRARESSRKQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVRL----- 66
           SNSDR+R   RK+K   S   +    + +  KW+S+ QQ+IYS+KLV AL ++R+     
Sbjct: 19  SNSDRSRR-KRKKKSSPSSVEKSPSPSISLEKWRSEKQQQIYSTKLVHALRELRISQQPS 78

Query: 67  SPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSAS----- 126
           S S+ + PR GRAVRE ADR LAVAA+G+T WSRAIL+  +KLKFRK KRQR ++     
Sbjct: 79  SSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKRQRISNPTTTT 138

Query: 127 -TAGNNRSKKPRVTVLRLRGKSLPAVQRKVRFLGRLVPGCRKEPLPVILEEATDYIAALE 186
            T G+ RSKK R TVLRL+ K LPAVQRKV+ L RLVPGCRK+ LPV+LEE TDYIAA+E
Sbjct: 139 LTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYIAAME 198

Query: 187 MQVRAMSALAELLSGS 192
           MQ+R M+A+   +S S
Sbjct: 199 MQIRTMTAILSAVSSS 213

[Close]

BLAST of HG10010421 vs. ExPASy Swiss-Prot
Match: Q9C8Z9 (Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.8e-41
Identity = 112/214 (52.34%), Postives = 142/214 (66.36%), Query Frame = 0


Query: 3   SSVLSNSDRARESSRKQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVRL- 62
           +S  S+  R ++ S       S  +      + H +W+S+ QQ IYS+KL +AL QVRL 
Sbjct: 12  TSTTSDLVRRKKRSSASSAASSRSSASSVSGEIHARWRSEKQQRIYSAKLFQALQQVRLN 71

Query: 63  -SPSNEAPP---RRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSAS- 122
            S S  + P   +RG+AVREAADR LAV+A+GRT WSRAIL NR+KLKFRK +R R+   
Sbjct: 72  SSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKFRKQRRPRATMA 131

Query: 123 --------TAGNNRSKKPRVTVLRLRGKSLPAVQRKVRFLGRLVPGCRKEPLPVILEEAT 182
                   ++ +NRS+K RV+VLRL  KS+P V RKVR LGRLVPGC K+ +PVILEEAT
Sbjct: 132 IPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEAT 191

Query: 183 DYIAALEMQVRAMSALAELLSGSTSAAGSGSTPP 203
           DYI ALEMQVRAM++L +LLS        GS PP
Sbjct: 192 DYIQALEMQVRAMNSLVQLLS------SYGSAPP 219

[Close]

BLAST of HG10010421 vs. ExPASy Swiss-Prot
Match: O80482 (Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 8.6e-28
Identity = 89/203 (43.84%), Postives = 129/203 (63.55%), Query Frame = 0


Query: 1   MASSVLSNSDRARESSRKQKKKKSHGNRDHHQ----NQNHIK-WKSQAQQEIYSSKLVRA 60
           M  S+  + +   ESSR++K + S       +    N+  +K WK+   Q+IY+ KLV A
Sbjct: 1   MVESLFPSIENTGESSRRKKPRISETAEAEIEARRVNEESLKRWKTNRVQQIYACKLVEA 60

Query: 61  LNQVRLSPS-------NEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRK 120
           L +VR   S       ++      R +R+ ADRVLA +A+G TRWSRAIL +R++ K +K
Sbjct: 61  LRRVRQRSSTTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILASRVRAKLKK 120

Query: 121 PKRQRSASTAGNNRSKKPRVTVLRLRGKSLPAVQRKVRFLGRLVPGCRKEPLPVILEEAT 180
            ++ + ++  GN +S+K      R++   LPAV+RK++ LGRLVPGCRK  +P +L+EAT
Sbjct: 121 HRKAKKST--GNCKSRKGLTETNRIK---LPAVERKLKILGRLVPGCRKVSVPNLLDEAT 180

Query: 181 DYIAALEMQVRAMSALAELLSGS 192
           DYIAALEMQVRAM ALAELL+ +
Sbjct: 181 DYIAALEMQVRAMEALAELLTAA 198

[Close]

BLAST of HG10010421 vs. ExPASy Swiss-Prot
Match: Q9M9L6 (Transcription factor bHLH150 OS=Arabidopsis thaliana OX=3702 GN=BHLH150 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.3e-20
Identity = 71/167 (42.51%), Postives = 94/167 (56.29%), Query Frame = 0


Query: 38  KWKSQAQQEIYSSKLVRALNQVRLSPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAI 97
           +W++   Q++YS KL  AL +           RR   VR+ AD+VLA  A+G TRWSRAI
Sbjct: 62  RWRATTAQKVYSLKLYDALQR----------SRRSATVRDTADKVLATTARGATRWSRAI 121

Query: 98  LTNRLKLKFR-----KPKRQRSASTAGNNRSKKPRVTVLRLRGKSLPAVQRKVRFLGRLV 157
           L +R     R     KP    +A+  G+  S          R + L AV  +VR LG LV
Sbjct: 122 LVSRFGTSLRRRRNTKPASALAAAIRGSGGSG---------RRRKLSAVGNRVRVLGGLV 181

Query: 158 PGCRKEPLPVILEEATDYIAALEMQVRAMSALAELLSGSTSAAGSGS 200
           PGCR+  LP +L+E  DYIAALEMQVRAM+AL+++LS    +   GS
Sbjct: 182 PGCRRTALPELLDETADYIAALEMQVRAMTALSKILSELQPSTNLGS 209

[Close]

BLAST of HG10010421 vs. ExPASy TrEMBL
Match: A0A6J1H465 (transcription factor bHLH147-like OS=Cucurbita moschata OX=3662 GN=LOC111460328 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.7e-90
Identity = 193/203 (95.07%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 1   MASSVLSNSDRARESSRKQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVR 60
           MASSV SNSDRARESSR+QKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVR
Sbjct: 1   MASSVHSNSDRARESSRRQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVR 60

Query: 61  LSPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSASTAGN 120
           LSP NEA PRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSASTAGN
Sbjct: 61  LSPPNEA-PRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSASTAGN 120

Query: 121 NRSKKPRVTVLRLRGKSLPAVQRKVRFLGRLVPGCRKEPLPVILEEATDYIAALEMQVRA 180
           NRSKKPRV+VLRLRGKSLPAVQRKVR LGRLVPGCRKEPLPVILEEATDYIAALEMQVRA
Sbjct: 121 NRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRA 180

Query: 181 MSALAELLSGSTSAAGSGSTPPS 204
           MSALAELLS STSAAGS S PP+
Sbjct: 181 MSALAELLSASTSAAGSSSAPPN 202

[Close]

BLAST of HG10010421 vs. ExPASy TrEMBL
Match: A0A0A0KCL4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G327940 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 8.2e-90
Identity = 196/206 (95.15%), Postives = 198/206 (96.12%), Query Frame = 0


Query: 1   MASSVLSNSDRARE-SSRKQKKKKSHGNRDHHQNQN-HIKWKSQAQQEIYSSKLVRALNQ 60
           MASSVLSNSDRARE SSRKQKKKKSHGNRDHHQNQN HIKWKSQAQQEIYSSKLVRALNQ
Sbjct: 1   MASSVLSNSDRARESSSRKQKKKKSHGNRDHHQNQNHHIKWKSQAQQEIYSSKLVRALNQ 60

Query: 61  VRLSPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRK-PKRQRSAST 120
           VRL PSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRK PKRQRS ST
Sbjct: 61  VRLGPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKAPKRQRSTST 120

Query: 121 AGNNRSKKPRVTVLRLRGKSLPAVQRKVRFLGRLVPGCRKEPLPVILEEATDYIAALEMQ 180
           AGNNRSKKPRV+VLRLRGKSLPAVQRKVR LGRLVPGCRKEPLPVILEEATDYIAALEMQ
Sbjct: 121 AGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ 180

Query: 181 VRAMSALAELLSGSTSAAGSGSTPPS 204
           VRAMSALAELLS STSAAGS S+PPS
Sbjct: 181 VRAMSALAELLSASTSAAGSSSSPPS 206

[Close]

BLAST of HG10010421 vs. ExPASy TrEMBL
Match: A0A6J1L1P5 (transcription factor bHLH147-like OS=Cucurbita maxima OX=3661 GN=LOC111499053 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 2.4e-89
Identity = 191/203 (94.09%), Postives = 194/203 (95.57%), Query Frame = 0


Query: 1   MASSVLSNSDRARESSRKQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVR 60
           MASSV SNSDRARESSR+QKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVR
Sbjct: 1   MASSVHSNSDRARESSRRQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVR 60

Query: 61  LSPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSASTAGN 120
           LSP NE  PRRGRAVREAADRVLAVAAKGRTRWSRAIL NRLKLKFRKPKRQRSASTAGN
Sbjct: 61  LSPPNEG-PRRGRAVREAADRVLAVAAKGRTRWSRAILKNRLKLKFRKPKRQRSASTAGN 120

Query: 121 NRSKKPRVTVLRLRGKSLPAVQRKVRFLGRLVPGCRKEPLPVILEEATDYIAALEMQVRA 180
           NRSKKPRV+VLRLRGKSLPAVQRKVR LGRLVPGCRKEPLPVILEEATDYIAALEMQVRA
Sbjct: 121 NRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRA 180

Query: 181 MSALAELLSGSTSAAGSGSTPPS 204
           MSALAELLS STSAAGS S PP+
Sbjct: 181 MSALAELLSASTSAAGSSSAPPN 202

[Close]

BLAST of HG10010421 vs. ExPASy TrEMBL
Match: A0A1S3C760 (transcription factor bHLH147-like OS=Cucumis melo OX=3656 GN=LOC103497780 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 7.0e-89
Identity = 194/206 (94.17%), Postives = 199/206 (96.60%), Query Frame = 0


Query: 1   MASSVLSNSDRARE-SSRKQKKKKSHGNRDHHQNQN-HIKWKSQAQQEIYSSKLVRALNQ 60
           MASSVLSNSDRARE SSRKQKKKKSHGNRDHHQ+QN HIKWKSQAQQEIYSSKLVRALNQ
Sbjct: 1   MASSVLSNSDRARESSSRKQKKKKSHGNRDHHQSQNHHIKWKSQAQQEIYSSKLVRALNQ 60

Query: 61  VRLSPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRK-PKRQRSAST 120
           VRLSPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRK P+RQRS S+
Sbjct: 61  VRLSPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKAPRRQRSTSS 120

Query: 121 AGNNRSKKPRVTVLRLRGKSLPAVQRKVRFLGRLVPGCRKEPLPVILEEATDYIAALEMQ 180
           AGNNRSKKPRV+VLRLRGKSLPAVQRKVR LGRLVPGCRKEPLPVILEEATDYIAALEMQ
Sbjct: 121 AGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ 180

Query: 181 VRAMSALAELLSGSTSAAGSGSTPPS 204
           VRAMSALAELLS STSAAGS S+PPS
Sbjct: 181 VRAMSALAELLSASTSAAGSSSSPPS 206

[Close]

BLAST of HG10010421 vs. ExPASy TrEMBL
Match: A0A5D3BVW3 (Transcription factor bHLH147-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00450 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 7.0e-89
Identity = 194/206 (94.17%), Postives = 199/206 (96.60%), Query Frame = 0


Query: 1   MASSVLSNSDRARE-SSRKQKKKKSHGNRDHHQNQN-HIKWKSQAQQEIYSSKLVRALNQ 60
           MASSVLSNSDRARE SSRKQKKKKSHGNRDHHQ+QN HIKWKSQAQQEIYSSKLVRALNQ
Sbjct: 1   MASSVLSNSDRARESSSRKQKKKKSHGNRDHHQSQNHHIKWKSQAQQEIYSSKLVRALNQ 60

Query: 61  VRLSPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRK-PKRQRSAST 120
           VRLSPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRK P+RQRS S+
Sbjct: 61  VRLSPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKAPRRQRSTSS 120

Query: 121 AGNNRSKKPRVTVLRLRGKSLPAVQRKVRFLGRLVPGCRKEPLPVILEEATDYIAALEMQ 180
           AGNNRSKKPRV+VLRLRGKSLPAVQRKVR LGRLVPGCRKEPLPVILEEATDYIAALEMQ
Sbjct: 121 AGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ 180

Query: 181 VRAMSALAELLSGSTSAAGSGSTPPS 204
           VRAMSALAELLS STSAAGS S+PPS
Sbjct: 181 VRAMSALAELLSASTSAAGSSSSPPS 206

[Close]

BLAST of HG10010421 vs. TAIR 10
Match: AT3G17100.1 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 175.6 bits (444), Expect = 3.9e-44
Identity = 110/196 (56.12%), Postives = 140/196 (71.43%), Query Frame = 0


Query: 7   SNSDRARESSRKQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVRL----- 66
           SNSDR+R   RK+K   S   +    + +  KW+S+ QQ+IYS+KLV AL ++R+     
Sbjct: 19  SNSDRSRR-KRKKKSSPSSVEKSPSPSISLEKWRSEKQQQIYSTKLVHALRELRISQQPS 78

Query: 67  SPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSAS----- 126
           S S+ + PR GRAVRE ADR LAVAA+G+T WSRAIL+  +KLKFRK KRQR ++     
Sbjct: 79  SSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKRQRISNPTTTT 138

Query: 127 -TAGNNRSKKPRVTVLRLRGKSLPAVQRKVRFLGRLVPGCRKEPLPVILEEATDYIAALE 186
            T G+ RSKK R TVLRL+ K LPAVQRKV+ L RLVPGCRK+ LPV+LEE TDYIAA+E
Sbjct: 139 LTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYIAAME 198

Query: 187 MQVRAMSALAELLSGS 192
           MQ+R M+A+   +S S
Sbjct: 199 MQIRTMTAILSAVSSS 213

[Close]

BLAST of HG10010421 vs. TAIR 10
Match: AT3G17100.2 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 175.6 bits (444), Expect = 3.9e-44
Identity = 110/196 (56.12%), Postives = 140/196 (71.43%), Query Frame = 0


Query: 7   SNSDRARESSRKQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVRL----- 66
           SNSDR+R   RK+K   S   +    + +  KW+S+ QQ+IYS+KLV AL ++R+     
Sbjct: 19  SNSDRSRR-KRKKKSSPSSVEKSPSPSISLEKWRSEKQQQIYSTKLVHALRELRISQQPS 78

Query: 67  SPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSAS----- 126
           S S+ + PR GRAVRE ADR LAVAA+G+T WSRAIL+  +KLKFRK KRQR ++     
Sbjct: 79  SSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKRQRISNPTTTT 138

Query: 127 -TAGNNRSKKPRVTVLRLRGKSLPAVQRKVRFLGRLVPGCRKEPLPVILEEATDYIAALE 186
            T G+ RSKK R TVLRL+ K LPAVQRKV+ L RLVPGCRK+ LPV+LEE TDYIAA+E
Sbjct: 139 LTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYIAAME 198

Query: 187 MQVRAMSALAELLSGS 192
           MQ+R M+A+   +S S
Sbjct: 199 MQIRTMTAILSAVSSS 213

[Close]

BLAST of HG10010421 vs. TAIR 10
Match: AT3G06590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 168.7 bits (426), Expect = 4.8e-42
Identity = 112/214 (52.34%), Postives = 142/214 (66.36%), Query Frame = 0


Query: 3   SSVLSNSDRARESSRKQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVRL- 62
           +S  S+  R ++ S       S  +      + H +W+S+ QQ IYS+KL +AL QVRL 
Sbjct: 12  TSTTSDLVRRKKRSSASSAASSRSSASSVSGEIHARWRSEKQQRIYSAKLFQALQQVRLN 71

Query: 63  -SPSNEAPP---RRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSAS- 122
            S S  + P   +RG+AVREAADR LAV+A+GRT WSRAIL NR+KLKFRK +R R+   
Sbjct: 72  SSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKFRKQRRPRATMA 131

Query: 123 --------TAGNNRSKKPRVTVLRLRGKSLPAVQRKVRFLGRLVPGCRKEPLPVILEEAT 182
                   ++ +NRS+K RV+VLRL  KS+P V RKVR LGRLVPGC K+ +PVILEEAT
Sbjct: 132 IPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEAT 191

Query: 183 DYIAALEMQVRAMSALAELLSGSTSAAGSGSTPP 203
           DYI ALEMQVRAM++L +LLS        GS PP
Sbjct: 192 DYIQALEMQVRAMNSLVQLLS------SYGSAPP 219

[Close]

BLAST of HG10010421 vs. TAIR 10
Match: AT3G06590.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 168.7 bits (426), Expect = 4.8e-42
Identity = 112/214 (52.34%), Postives = 142/214 (66.36%), Query Frame = 0


Query: 3   SSVLSNSDRARESSRKQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVRL- 62
           +S  S+  R ++ S       S  +      + H +W+S+ QQ IYS+KL +AL QVRL 
Sbjct: 12  TSTTSDLVRRKKRSSASSAASSRSSASSVSGEIHARWRSEKQQRIYSAKLFQALQQVRLN 71

Query: 63  -SPSNEAPP---RRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSAS- 122
            S S  + P   +RG+AVREAADR LAV+A+GRT WSRAIL NR+KLKFRK +R R+   
Sbjct: 72  SSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKFRKQRRPRATMA 131

Query: 123 --------TAGNNRSKKPRVTVLRLRGKSLPAVQRKVRFLGRLVPGCRKEPLPVILEEAT 182
                   ++ +NRS+K RV+VLRL  KS+P V RKVR LGRLVPGC K+ +PVILEEAT
Sbjct: 132 IPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEAT 191

Query: 183 DYIAALEMQVRAMSALAELLSGSTSAAGSGSTPP 203
           DYI ALEMQVRAM++L +LLS        GS PP
Sbjct: 192 DYIQALEMQVRAMNSLVQLLS------SYGSAPP 219

[Close]

BLAST of HG10010421 vs. TAIR 10
Match: AT1G09250.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 125.2 bits (313), Expect = 6.1e-29
Identity = 89/203 (43.84%), Postives = 129/203 (63.55%), Query Frame = 0


Query: 1   MASSVLSNSDRARESSRKQKKKKSHGNRDHHQ----NQNHIK-WKSQAQQEIYSSKLVRA 60
           M  S+  + +   ESSR++K + S       +    N+  +K WK+   Q+IY+ KLV A
Sbjct: 1   MVESLFPSIENTGESSRRKKPRISETAEAEIEARRVNEESLKRWKTNRVQQIYACKLVEA 60

Query: 61  LNQVRLSPS-------NEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRK 120
           L +VR   S       ++      R +R+ ADRVLA +A+G TRWSRAIL +R++ K +K
Sbjct: 61  LRRVRQRSSTTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILASRVRAKLKK 120

Query: 121 PKRQRSASTAGNNRSKKPRVTVLRLRGKSLPAVQRKVRFLGRLVPGCRKEPLPVILEEAT 180
            ++ + ++  GN +S+K      R++   LPAV+RK++ LGRLVPGCRK  +P +L+EAT
Sbjct: 121 HRKAKKST--GNCKSRKGLTETNRIK---LPAVERKLKILGRLVPGCRKVSVPNLLDEAT 180

Query: 181 DYIAALEMQVRAMSALAELLSGS 192
           DYIAALEMQVRAM ALAELL+ +
Sbjct: 181 DYIAALEMQVRAMEALAELLTAA 198

The following BLAST results are available for this feature:

BLAST of HG10010421 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875658.1	1.2e-90	94.09	transcription factor bHLH147-like [Benincasa hispida]	[more]
XP_022959317.1	3.4e-90	95.07	transcription factor bHLH147-like [Cucurbita moschata] >XP_023548462.1 transcrip...	[more]
XP_004148798.1	1.7e-89	95.15	transcription factor bHLH147 [Cucumis sativus] >XP_004148799.1 transcription fac...	[more]
XP_023006264.1	4.9e-89	94.09	transcription factor bHLH147-like [Cucurbita maxima]	[more]
XP_008458338.1	1.4e-88	94.17	PREDICTED: transcription factor bHLH147-like [Cucumis melo] >XP_008458339.1 PRED...	[more]

BLAST of HG10010421 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSN7	5.6e-43	56.12	Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=...	[more]
Q9C8Z9	6.8e-41	52.34	Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=...	[more]
O80482	8.6e-28	43.84	Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=...	[more]
Q9M9L6	1.3e-20	42.51	Transcription factor bHLH150 OS=Arabidopsis thaliana OX=3702 GN=BHLH150 PE=1 SV=...	[more]

BLAST of HG10010421 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H465	1.7e-90	95.07	transcription factor bHLH147-like OS=Cucurbita moschata OX=3662 GN=LOC111460328 ...	[more]
A0A0A0KCL4	8.2e-90	95.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G327940 PE=4 SV=1	[more]
A0A6J1L1P5	2.4e-89	94.09	transcription factor bHLH147-like OS=Cucurbita maxima OX=3661 GN=LOC111499053 PE...	[more]
A0A1S3C760	7.0e-89	94.17	transcription factor bHLH147-like OS=Cucumis melo OX=3656 GN=LOC103497780 PE=4 S...	[more]
A0A5D3BVW3	7.0e-89	94.17	Transcription factor bHLH147-like protein OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of HG10010421 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17100.1	3.9e-44	56.12	sequence-specific DNA binding transcription factors	[more]
AT3G17100.2	3.9e-44	56.12	sequence-specific DNA binding transcription factors	[more]
AT3G06590.1	4.8e-42	52.34	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G06590.2	4.8e-42	52.34	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G09250.1	6.1e-29	43.84	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..126
None	No IPR available	PANTHER	PTHR33124:SF78	TRANSCRIPTION FACTOR BHLH148-LIKE ISOFORM X1	coord: 15..201
IPR044660	Transcription factor IBH1-like	PANTHER	PTHR33124	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 15..201
IPR044549	Transcription factor IBH1-like, bHLH domain	CDD	cd11444	bHLH_AtIBH1_like	coord: 130..185 e-value: 3.40149E-17 score: 70.344
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 145..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10010421.1	HG10010421.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000976	transcription cis-regulatory region binding