HG10010366 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10010366
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RING-H2 finger protein ATL2-like
Location	Chr06: 21553551 .. 21554288 (+)
RNA-Seq Expression	HG10010366
Synteny	HG10010366

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGACGACGACGACGACGGCGGCTTCTTCTCTCCGCCGTCCTACAAACGCTACGCTCTCAGTGGCAAAATTATGCTCGGCGCAATCATTTTATTGTTATTCGTCGTCATCCTCATGATTTGTCTTCATCTCTATGTTCGATTGTACTTACTCTCCTCCAGCCGCCGGCAACCCCGTAGCCGCATCCGTCGCCGTCGCCGTCGCGAGCACTTTGTTTTCGTGGCGGAGCCTCGAATCGCGGCCGCCGCTGCTCCGTCGCGTGGTTTGCCACAGTCGATTCTCAAATCCCTACCCGTTTTCGTTCACTCGAAGAAACCCGACCCGGATCTGATTTATTGTGCTGTTTGTTTATCGGAATTTGAAGAGAACGAAATCGGGCGGATTATTCCCAAATGCAACCATAGCTTCCACGTGGGGTGTATTGATATGTGGTTTTATTCGCACGTGACTTGCCCGCTTTGTAGATCCGAGGTGAAACCCGAACTTGGATCTGGATCCGGCCCATTTGTTGACCCGGTGGAGATAGCTATTGATGTTTGTGAATCGGGTTCGAGATCTGGCGAGGAAGAACCGGATCGTGAGTGTCCGGTTGAGATGGCGTCGGTGGAGTTGGTGGACGACGAGTCGAGGCATGTGAACGACATGTCGGATGACGGGACGTCAAGGGCAACGGCGAATTTTGTGAAGTCGTTGTCCGTGAAGGAGGAAACGGAGACAGTGCGTTCTGAAAGATAA

mRNA sequence

ATGGCCGACGACGACGACGACGGCGGCTTCTTCTCTCCGCCGTCCTACAAACGCTACGCTCTCAGTGGCAAAATTATGCTCGGCGCAATCATTTTATTGTTATTCGTCGTCATCCTCATGATTTGTCTTCATCTCTATGTTCGATTGTACTTACTCTCCTCCAGCCGCCGGCAACCCCGTAGCCGCATCCGTCGCCGTCGCCGTCGCGAGCACTTTGTTTTCGTGGCGGAGCCTCGAATCGCGGCCGCCGCTGCTCCGTCGCGTGGTTTGCCACAGTCGATTCTCAAATCCCTACCCGTTTTCGTTCACTCGAAGAAACCCGACCCGGATCTGATTTATTGTGCTGTTTGTTTATCGGAATTTGAAGAGAACGAAATCGGGCGGATTATTCCCAAATGCAACCATAGCTTCCACGTGGGGTGTATTGATATGTGGTTTTATTCGCACGTGACTTGCCCGCTTTGTAGATCCGAGGTGAAACCCGAACTTGGATCTGGATCCGGCCCATTTGTTGACCCGGTGGAGATAGCTATTGATGTTTGTGAATCGGGTTCGAGATCTGGCGAGGAAGAACCGGATCGTGAGTGTCCGGTTGAGATGGCGTCGGTGGAGTTGGTGGACGACGAGTCGAGGCATGTGAACGACATGTCGGATGACGGGACGTCAAGGGCAACGGCGAATTTTGTGAAGTCGTTGTCCGTGAAGGAGGAAACGGAGACAGTGCGTTCTGAAAGATAA

Coding sequence (CDS)

ATGGCCGACGACGACGACGACGGCGGCTTCTTCTCTCCGCCGTCCTACAAACGCTACGCTCTCAGTGGCAAAATTATGCTCGGCGCAATCATTTTATTGTTATTCGTCGTCATCCTCATGATTTGTCTTCATCTCTATGTTCGATTGTACTTACTCTCCTCCAGCCGCCGGCAACCCCGTAGCCGCATCCGTCGCCGTCGCCGTCGCGAGCACTTTGTTTTCGTGGCGGAGCCTCGAATCGCGGCCGCCGCTGCTCCGTCGCGTGGTTTGCCACAGTCGATTCTCAAATCCCTACCCGTTTTCGTTCACTCGAAGAAACCCGACCCGGATCTGATTTATTGTGCTGTTTGTTTATCGGAATTTGAAGAGAACGAAATCGGGCGGATTATTCCCAAATGCAACCATAGCTTCCACGTGGGGTGTATTGATATGTGGTTTTATTCGCACGTGACTTGCCCGCTTTGTAGATCCGAGGTGAAACCCGAACTTGGATCTGGATCCGGCCCATTTGTTGACCCGGTGGAGATAGCTATTGATGTTTGTGAATCGGGTTCGAGATCTGGCGAGGAAGAACCGGATCGTGAGTGTCCGGTTGAGATGGCGTCGGTGGAGTTGGTGGACGACGAGTCGAGGCATGTGAACGACATGTCGGATGACGGGACGTCAAGGGCAACGGCGAATTTTGTGAAGTCGTTGTCCGTGAAGGAGGAAACGGAGACAGTGCGTTCTGAAAGATAA

Protein sequence

MADDDDDGGFFSPPSYKRYALSGKIMLGAIILLLFVVILMICLHLYVRLYLLSSSRRQPRSRIRRRRRREHFVFVAEPRIAAAAAPSRGLPQSILKSLPVFVHSKKPDPDLIYCAVCLSEFEENEIGRIIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPELGSGSGPFVDPVEIAIDVCESGSRSGEEEPDRECPVEMASVELVDDESRHVNDMSDDGTSRATANFVKSLSVKEETETVRSER

Homology

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BLAST of HG10010366 vs. NCBI nr
Match: XP_038875154.1 (RING-H2 finger protein ATL2-like [Benincasa hispida])

HSP 1 Score: 422.9 bits (1086), Expect = 1.8e-114
Identity = 222/246 (90.24%), Postives = 224/246 (91.06%), Query Frame = 0


Query: 1   MADDDDDGGFFSPPSYKRYALSGKIMLGAIILLLFVVILMICLHLYVRLYLLSSSRRQPR 60
           MADDDDDGG FSPPSYKRYA SGKIMLGAIILLLFVVILMICLHLYVRLYLLSSSRRQ  
Sbjct: 1   MADDDDDGGLFSPPSYKRYAFSGKIMLGAIILLLFVVILMICLHLYVRLYLLSSSRRQSH 60

Query: 61  SRIRRRRRREHFVFVAEPRIAAAAAPSRGLPQSILKSLPVFVHSKKPDPDLIYCAVCLSE 120
           SRIRRRRRREHFVF AEPRI  AAAPS GLPQSILKSLPVFVHS KPDPD IYCAVCLSE
Sbjct: 61  SRIRRRRRREHFVFTAEPRI--AAAPSHGLPQSILKSLPVFVHSGKPDPDPIYCAVCLSE 120

Query: 121 FEENEIGRIIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPELGSGSGPFVDPVEIAIDV 180
           FEENEIGRIIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPELGSGSGPF DPVEIAID+
Sbjct: 121 FEENEIGRIIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPELGSGSGPFDDPVEIAIDI 180

Query: 181 CESGSRSGEEEPDRECPVEM-ASVELVDDESRHVNDMSDDGTSRATANFVKSLSVKEETE 240
            E GS SGEEEPDR CPVEM ASVELVD+ESR V DMSDDGTSR TANFVKSLSVKEE E
Sbjct: 181 SEPGSSSGEEEPDRWCPVEMAASVELVDNESRQVVDMSDDGTSRITANFVKSLSVKEEIE 240

Query: 241 TVRSER 246
            V SER
Sbjct: 241 AVHSER 244

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BLAST of HG10010366 vs. NCBI nr
Match: XP_004150504.1 (RING-H2 finger protein ATL2 [Cucumis sativus] >KGN47424.1 hypothetical protein Csa_021711 [Cucumis sativus])

HSP 1 Score: 393.7 bits (1010), Expect = 1.2e-105
Identity = 208/246 (84.55%), Postives = 213/246 (86.59%), Query Frame = 0


Query: 1   MADDDDDGGFFSPPSYKRYALSGKIMLGAIILLLFVVILMICLHLYVRLYLLSSSRRQPR 60
           MADDDDD     PPSY RYALSGKIMLGAIILLLFVVILMICLHLYVRL+LLSS+ R   
Sbjct: 1   MADDDDDASLLYPPSYTRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSTPRP-- 60

Query: 61  SRIRRRRRREHFVFVAEPRIAAAAAPSRGLPQSILKSLPVFVHSKKPDPDLIYCAVCLSE 120
           SRIRRRRRR+HFVF AEPRIAAA  PSRGLPQSILKSLPVFVHS+K DPD IYCAVCLSE
Sbjct: 61  SRIRRRRRRQHFVFTAEPRIAAAGVPSRGLPQSILKSLPVFVHSEKTDPDPIYCAVCLSE 120

Query: 121 FEENEIGRIIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPELGSGSGPFVDPVEIAIDV 180
           FEENEIGR IPKCNHSFHVGCIDMWFYSH TCPLCRSEVKPE    SGP  DP EIAIDV
Sbjct: 121 FEENEIGRSIPKCNHSFHVGCIDMWFYSHATCPLCRSEVKPEPECESGPHDDPGEIAIDV 180

Query: 181 CESGSRSGEEEPDRECPVEM-ASVELVDDESRHVNDMSDDGTSRATANFVKSLSVKEETE 240
           CE GSRSGEEE D  CPVEM ASVE+VDDESRHVNDMSDDGTSRAT NFVKSLSVKEE E
Sbjct: 181 CELGSRSGEEETDHRCPVEMAASVEVVDDESRHVNDMSDDGTSRATVNFVKSLSVKEEIE 240

Query: 241 TVRSER 246
            V SER
Sbjct: 241 AVGSER 244

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BLAST of HG10010366 vs. NCBI nr
Match: XP_008458410.1 (PREDICTED: RING-H2 finger protein ATL2-like [Cucumis melo])

HSP 1 Score: 393.3 bits (1009), Expect = 1.6e-105
Identity = 211/247 (85.43%), Postives = 216/247 (87.45%), Query Frame = 0


Query: 1   MADDDDDGGFFSPPSYKRYALSGKIMLGAIILLLFVVILMICLHLYVRLYLLSSSRRQP- 60
           MADDDDDG  FSPPSY+RYALSGKIMLGAIILLLFVVILMICLHLYVRL+LLSSS  +P 
Sbjct: 1   MADDDDDGTLFSPPSYRRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSSTHRPS 60

Query: 61  RSRIRRRRRREHFVFVAEPRIAAAAAPSRGLPQSILKSLPVFVHSKKPDPDLIYCAVCLS 120
           RSRIRRRRRREHFVF AEPRIAAA APSRGLPQSILKSLPVFVH  K DPD IYCAVCLS
Sbjct: 61  RSRIRRRRRREHFVFTAEPRIAAAGAPSRGLPQSILKSLPVFVHLAKTDPDPIYCAVCLS 120

Query: 121 EFEENEIGRIIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPELGSGSGPFVDPVEIAID 180
           EFEENEIGR IPKCNH FHVGCIDMWFYSHVTCPLCRSEVKPE G GSGP     EIAID
Sbjct: 121 EFEENEIGRSIPKCNHRFHVGCIDMWFYSHVTCPLCRSEVKPEPGCGSGPC---GEIAID 180

Query: 181 VCESGSRSGEEEPDRECPVEM-ASVELVDDESRHVNDMSDDGTSRATANFVKSLSVKEET 240
           V E GSRSGEEE D  CPVEM ASVE+V+DESRHVNDMSDDGTSRAT NFVKSLSVKEE 
Sbjct: 181 VSEVGSRSGEEERDGGCPVEMAASVEVVEDESRHVNDMSDDGTSRATVNFVKSLSVKEEI 240

Query: 241 ETVRSER 246
           E   SER
Sbjct: 241 EAAGSER 244

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BLAST of HG10010366 vs. NCBI nr
Match: XP_023006465.1 (RING-H2 finger protein ATL2-like [Cucurbita maxima])

HSP 1 Score: 347.8 bits (891), Expect = 7.5e-92
Identity = 190/247 (76.92%), Postives = 202/247 (81.78%), Query Frame = 0


Query: 1   MADDDDD-GGFFSPPSYKRYALSGKIMLGAIILLLFVVILMICLHLYVRLYLLSSSRRQP 60
           MADDDDD GG FSP S+K YALSGKIMLG +I+LLFVVILMICLHLYVRLYLLSSSRRQ 
Sbjct: 1   MADDDDDGGGLFSPSSFKSYALSGKIMLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQS 60

Query: 61  RSRIRRRRRREHFVFVAEPRIAAAAAPSRGLPQSILKSLPVFVHSKKPDPDLIYCAVCLS 120
           RS  RRRRRR  F F  EPRIAAA+  SRGLP SILK+LPVFVHS KPDPD +YCAVCLS
Sbjct: 61  RSH-RRRRRRVQFEFTTEPRIAAAS--SRGLPHSILKTLPVFVHSMKPDPDPVYCAVCLS 120

Query: 121 EFEENEIGRIIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPELGSGSGPFVDPVEIAID 180
           EFEENEIGR IPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPE GS SGP  DPVEI +D
Sbjct: 121 EFEENEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSDDPVEIVLD 180

Query: 181 VCESGSRSGEEEPDRECPVEM-ASVELVDDESRHVNDMSDDGTSRATANFVKSLSVKEET 240
           VCE GSRS E+EPDRECPVEM ASVELVDD SR V D     TS  T +F+KSLS+K   
Sbjct: 181 VCEPGSRSSEDEPDRECPVEMAASVELVDDASRPVAD-----TSETTTSFMKSLSLKRIL 239

Query: 241 ETVRSER 246
               +ER
Sbjct: 241 SRDATER 239

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BLAST of HG10010366 vs. NCBI nr
Match: KAG7013653.1 (RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 347.1 bits (889), Expect = 1.3e-91
Identity = 186/234 (79.49%), Postives = 198/234 (84.62%), Query Frame = 0


Query: 3   DDDDDGGFFSPPSYKRYALSGKIMLGAIILLLFVVILMICLHLYVRLYLLSSSRRQPRSR 62
           DDDD GG FSP S+K YALSGKIMLGA+I+LLFVVILMICLHLYVRLYLLSSSRRQ RS 
Sbjct: 5   DDDDGGGLFSPSSFKSYALSGKIMLGAVIVLLFVVILMICLHLYVRLYLLSSSRRQSRSH 64

Query: 63  IRRRRRREHFVFVAEPRIAAAAAPSRGLPQSILKSLPVFVHSKKPDPDLIYCAVCLSEFE 122
            RRRRRR  F F  EPRIAAA+  SRGLPQSILKSLPVFVHS KPDPD +YCAVCLSEFE
Sbjct: 65  -RRRRRRVQFEFPMEPRIAAAS--SRGLPQSILKSLPVFVHSMKPDPDPVYCAVCLSEFE 124

Query: 123 ENEIGRIIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPELGSGSGPFVDPVEIAIDVCE 182
           ENEIGR IPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPE GS SGP  DPVE+ +DVCE
Sbjct: 125 ENEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSNDPVELVLDVCE 184

Query: 183 SGSRSGEEEPDRECPVEM-ASVELVDDESRHVNDMSDDGTSRATANFVKSLSVK 236
            GSRS E+EP RECPVEM ASVE+VDDESR V  MS+      T +FVKSLS+K
Sbjct: 185 PGSRSSEDEPVRECPVEMAASVEMVDDESRPVAGMSE-----TTTSFVKSLSLK 230

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BLAST of HG10010366 vs. ExPASy Swiss-Prot
Match: Q8L9T5 (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 165.6 bits (418), Expect = 6.9e-40
Identity = 100/185 (54.05%), Postives = 120/185 (64.86%), Query Frame = 0


Query: 17  KRYALSGKIMLGAIILLLFVVILMICLHLYVRLYLLSSSRRQPRSRIRRRRRREHFVFVA 76
           K YA+SGKIML AI++L FVVILM+ LHLY R YLL + RR  R R R RR    F F A
Sbjct: 22  KTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVF-FTA 81

Query: 77  EPRIAA-AAAPSRGLPQSILKSLPVFVHSKKPDPDLIYCAVCLSEFEENEIGRIIPKCNH 136
           +P  AA +   SRGL  +++KSLPVF  S +   D I CAVCLSEFEE+E GR++P C H
Sbjct: 82  DPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQH 141

Query: 137 SFHVGCIDMWFYSHVTCPLCRSEVKPELG--SGSGPFVDPVEIAID-----VCESGSRSG 193
           +FHV CIDMWF+SH TCPLCRS V+   G  S +      V IA+D     V E  S SG
Sbjct: 142 TFHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDPVLVIEPSSSSG 201

[Close]

BLAST of HG10010366 vs. ExPASy Swiss-Prot
Match: O22255 (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.1e-28
Identity = 73/170 (42.94%), Postives = 98/170 (57.65%), Query Frame = 0


Query: 19  YALSGKIMLGAIILLLFVVILMICLHLYVRLYLLSSSRRQPRSRIRRRRRREHFVFVAEP 78
           YAL+GKIML ++I+L   VI+++C H Y R        R+   RIRRR R       A P
Sbjct: 22  YALNGKIMLSSVIVLFVAVIMILCFHSYARWLF-----RRHNRRIRRRIRSHLRTLSASP 81

Query: 79  RIAAAAAPSRGLPQSILKSLPVFVHSKK---PDPDLIYCAVCLSEFEENEIGRIIPKCNH 138
           R        + L Q++L  +P+FV+S K   P  +   C+VCLSEFEE + GR++PKC H
Sbjct: 82  R-------DQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGH 141

Query: 139 SFHVGCIDMWFYSHVTCPLCRSEVKPE---LGSGSGPFVDPVEIAIDVCE 183
           SFHV CID WF S  TCPLCR+ V+P    + +GS     P+    + CE
Sbjct: 142 SFHVDCIDTWFRSRSTCPLCRAPVQPPFQVIETGSSSSSSPLTFPTEGCE 179

[Close]

BLAST of HG10010366 vs. ExPASy Swiss-Prot
Match: Q9LZJ6 (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 6.7e-27
Identity = 75/190 (39.47%), Postives = 108/190 (56.84%), Query Frame = 0


Query: 18  RYALSGKIMLGAIILLLFVVILMICLHLYVRLYLLSSSRRQPRSRIRRRRRREHFVFVAE 77
           RY+L+GKIML ++I+L   VIL++C H Y R      +RR       RRR   H   +A 
Sbjct: 21  RYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRR------IRRRISAHLRSLAA 80

Query: 78  PRIAAAAAPSRG-LPQSILKSLPVFVHS-KKPDPDLIYCAVCLSEFEENEIGRIIPKCNH 137
            R    ++ S   L  ++L+ +P+FV+S K  +  L  C+VCLSEFEE++ GR++PKC H
Sbjct: 81  ARDPTQSSSSLSPLDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGH 140

Query: 138 SFHVGCIDMWFYSHVTCPLCRSEVKPELGSGSGPFVDPVEIA--------IDVCESGSRS 197
            FHV CID WF S  +CPLCR+ V+P     + P  +P  +A        I+  E+GS S
Sbjct: 141 VFHVDCIDTWFRSRSSCPLCRAPVQP-----AQPVTEPEPVAAVFPSVKPIEDTEAGSSS 199

[Close]

BLAST of HG10010366 vs. ExPASy Swiss-Prot
Match: Q8LF65 (RING-H2 finger protein ATL17 OS=Arabidopsis thaliana OX=3702 GN=ATL17 PE=2 SV=2)

HSP 1 Score: 121.3 bits (303), Expect = 1.5e-26
Identity = 71/153 (46.41%), Postives = 94/153 (61.44%), Query Frame = 0


Query: 26  MLGAIILLLFVVILMICLHLYVRLYLLSSSRRQPRSRIRRRRRREHFVFVAEPRIAAAAA 85
           ML   IL+L +VILM+ LHLY R YLL SS   P +R           F  +P     ++
Sbjct: 1   MLTTTILILLIVILMVSLHLYYRWYLLRSS---PFNRTTAAS-----TFFTDP-----SS 60

Query: 86  PSRGLPQSILKSLPVFVHSKKPDPDLIYCAVCLSEFEENEIGRIIPKCNHSFHVGCIDMW 145
              GL  SI+KSLP+F  S       + C+VCLSEF++NE GR++P C H+FHV CIDMW
Sbjct: 61  TPGGLNPSIIKSLPIFTFSAVTALFAMECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMW 120

Query: 146 FYSHVTCPLCRSEVKPELGSGSGPFVDPVEIAI 179
           F+SH +CPLCRS+++P  G G    +D V I+I
Sbjct: 121 FHSHSSCPLCRSQIEPFAG-GVKSSMDEVAISI 139

[Close]

BLAST of HG10010366 vs. ExPASy Swiss-Prot
Match: Q9XF63 (RING-H2 finger protein ATL3 OS=Arabidopsis thaliana OX=3702 GN=ATL3 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.7e-20
Identity = 59/157 (37.58%), Postives = 86/157 (54.78%), Query Frame = 0


Query: 21  LSGKIMLGAIILLLFVVILMICLHLYVRLY------LLSSSRRQPRSR------------ 80
           ++ KI+L AII+L   V+ ++ LHLY +LY      L    ++Q + +            
Sbjct: 20  VTSKIILTAIIVLFMAVLFVLILHLYAKLYWWRIDQLQQQQQQQQQEQEQEEDQSSIAPP 79

Query: 81  IRRRRRREHFVFVAEPRIAAAAAPSRGLPQSILKSLPVFVHSKKPDPDLIYCAVCLSEFE 140
           +  RR+R  F+FV        A  + GL    L SLP+    +    D + C++CLSE  
Sbjct: 80  VVTRRQRRRFIFVP----GQDALSNTGLTSFELSSLPIVFFRQDSCKDGLECSICLSELV 139

Query: 141 ENEIGRIIPKCNHSFHVGCIDMWFYSHVTCPLCRSEV 160
           + +  R++PKCNHSFHV CIDMWF SH TCP+CR+ V
Sbjct: 140 KGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTV 172

[Close]

BLAST of HG10010366 vs. ExPASy TrEMBL
Match: A0A0A0KF25 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G318710 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 5.8e-106
Identity = 208/246 (84.55%), Postives = 213/246 (86.59%), Query Frame = 0


Query: 1   MADDDDDGGFFSPPSYKRYALSGKIMLGAIILLLFVVILMICLHLYVRLYLLSSSRRQPR 60
           MADDDDD     PPSY RYALSGKIMLGAIILLLFVVILMICLHLYVRL+LLSS+ R   
Sbjct: 1   MADDDDDASLLYPPSYTRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSTPRP-- 60

Query: 61  SRIRRRRRREHFVFVAEPRIAAAAAPSRGLPQSILKSLPVFVHSKKPDPDLIYCAVCLSE 120
           SRIRRRRRR+HFVF AEPRIAAA  PSRGLPQSILKSLPVFVHS+K DPD IYCAVCLSE
Sbjct: 61  SRIRRRRRRQHFVFTAEPRIAAAGVPSRGLPQSILKSLPVFVHSEKTDPDPIYCAVCLSE 120

Query: 121 FEENEIGRIIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPELGSGSGPFVDPVEIAIDV 180
           FEENEIGR IPKCNHSFHVGCIDMWFYSH TCPLCRSEVKPE    SGP  DP EIAIDV
Sbjct: 121 FEENEIGRSIPKCNHSFHVGCIDMWFYSHATCPLCRSEVKPEPECESGPHDDPGEIAIDV 180

Query: 181 CESGSRSGEEEPDRECPVEM-ASVELVDDESRHVNDMSDDGTSRATANFVKSLSVKEETE 240
           CE GSRSGEEE D  CPVEM ASVE+VDDESRHVNDMSDDGTSRAT NFVKSLSVKEE E
Sbjct: 181 CELGSRSGEEETDHRCPVEMAASVEVVDDESRHVNDMSDDGTSRATVNFVKSLSVKEEIE 240

Query: 241 TVRSER 246
            V SER
Sbjct: 241 AVGSER 244

[Close]

BLAST of HG10010366 vs. ExPASy TrEMBL
Match: A0A1S3C7X4 (RING-H2 finger protein ATL2-like OS=Cucumis melo OX=3656 GN=LOC103497834 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 7.6e-106
Identity = 211/247 (85.43%), Postives = 216/247 (87.45%), Query Frame = 0


Query: 1   MADDDDDGGFFSPPSYKRYALSGKIMLGAIILLLFVVILMICLHLYVRLYLLSSSRRQP- 60
           MADDDDDG  FSPPSY+RYALSGKIMLGAIILLLFVVILMICLHLYVRL+LLSSS  +P 
Sbjct: 1   MADDDDDGTLFSPPSYRRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSSTHRPS 60

Query: 61  RSRIRRRRRREHFVFVAEPRIAAAAAPSRGLPQSILKSLPVFVHSKKPDPDLIYCAVCLS 120
           RSRIRRRRRREHFVF AEPRIAAA APSRGLPQSILKSLPVFVH  K DPD IYCAVCLS
Sbjct: 61  RSRIRRRRRREHFVFTAEPRIAAAGAPSRGLPQSILKSLPVFVHLAKTDPDPIYCAVCLS 120

Query: 121 EFEENEIGRIIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPELGSGSGPFVDPVEIAID 180
           EFEENEIGR IPKCNH FHVGCIDMWFYSHVTCPLCRSEVKPE G GSGP     EIAID
Sbjct: 121 EFEENEIGRSIPKCNHRFHVGCIDMWFYSHVTCPLCRSEVKPEPGCGSGPC---GEIAID 180

Query: 181 VCESGSRSGEEEPDRECPVEM-ASVELVDDESRHVNDMSDDGTSRATANFVKSLSVKEET 240
           V E GSRSGEEE D  CPVEM ASVE+V+DESRHVNDMSDDGTSRAT NFVKSLSVKEE 
Sbjct: 181 VSEVGSRSGEEERDGGCPVEMAASVEVVEDESRHVNDMSDDGTSRATVNFVKSLSVKEEI 240

Query: 241 ETVRSER 246
           E   SER
Sbjct: 241 EAAGSER 244

[Close]

BLAST of HG10010366 vs. ExPASy TrEMBL
Match: A0A6J1L074 (RING-H2 finger protein ATL2-like OS=Cucurbita maxima OX=3661 GN=LOC111499181 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 3.6e-92
Identity = 190/247 (76.92%), Postives = 202/247 (81.78%), Query Frame = 0


Query: 1   MADDDDD-GGFFSPPSYKRYALSGKIMLGAIILLLFVVILMICLHLYVRLYLLSSSRRQP 60
           MADDDDD GG FSP S+K YALSGKIMLG +I+LLFVVILMICLHLYVRLYLLSSSRRQ 
Sbjct: 1   MADDDDDGGGLFSPSSFKSYALSGKIMLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQS 60

Query: 61  RSRIRRRRRREHFVFVAEPRIAAAAAPSRGLPQSILKSLPVFVHSKKPDPDLIYCAVCLS 120
           RS  RRRRRR  F F  EPRIAAA+  SRGLP SILK+LPVFVHS KPDPD +YCAVCLS
Sbjct: 61  RSH-RRRRRRVQFEFTTEPRIAAAS--SRGLPHSILKTLPVFVHSMKPDPDPVYCAVCLS 120

Query: 121 EFEENEIGRIIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPELGSGSGPFVDPVEIAID 180
           EFEENEIGR IPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPE GS SGP  DPVEI +D
Sbjct: 121 EFEENEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSDDPVEIVLD 180

Query: 181 VCESGSRSGEEEPDRECPVEM-ASVELVDDESRHVNDMSDDGTSRATANFVKSLSVKEET 240
           VCE GSRS E+EPDRECPVEM ASVELVDD SR V D     TS  T +F+KSLS+K   
Sbjct: 181 VCEPGSRSSEDEPDRECPVEMAASVELVDDASRPVAD-----TSETTTSFMKSLSLKRIL 239

Query: 241 ETVRSER 246
               +ER
Sbjct: 241 SRDATER 239

[Close]

BLAST of HG10010366 vs. ExPASy TrEMBL
Match: A0A6J1H376 (RING-H2 finger protein ATL2-like OS=Cucurbita moschata OX=3662 GN=LOC111459976 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 1.1e-91
Identity = 186/234 (79.49%), Postives = 197/234 (84.19%), Query Frame = 0


Query: 3   DDDDDGGFFSPPSYKRYALSGKIMLGAIILLLFVVILMICLHLYVRLYLLSSSRRQPRSR 62
           DDDD GG FSP S+K YALSGKIMLGA+I+LLFVVILMICLHLYVRLYLLSSSRRQ RS 
Sbjct: 5   DDDDGGGLFSPSSFKSYALSGKIMLGAVIVLLFVVILMICLHLYVRLYLLSSSRRQSRSH 64

Query: 63  IRRRRRREHFVFVAEPRIAAAAAPSRGLPQSILKSLPVFVHSKKPDPDLIYCAVCLSEFE 122
            RRRRRR  F F  EPRIAAA+  SRGLPQSILKSLPVFVHS KPDPD +YCAVCLSEFE
Sbjct: 65  -RRRRRRVQFEFTTEPRIAAAS--SRGLPQSILKSLPVFVHSMKPDPDPVYCAVCLSEFE 124

Query: 123 ENEIGRIIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPELGSGSGPFVDPVEIAIDVCE 182
           ENEIGR IPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPE GS SGP  DPVE+ +DVCE
Sbjct: 125 ENEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSNDPVELVLDVCE 184

Query: 183 SGSRSGEEEPDRECPVEM-ASVELVDDESRHVNDMSDDGTSRATANFVKSLSVK 236
            GSRS E+EP REC VEM ASVELVDDESR   DMS+      T +FVKSLS+K
Sbjct: 185 PGSRSSEDEPVRECLVEMAASVELVDDESRPAADMSE-----TTTSFVKSLSLK 230

[Close]

BLAST of HG10010366 vs. ExPASy TrEMBL
Match: A0A6J1CAT0 (RING-H2 finger protein ATL2-like OS=Momordica charantia OX=3673 GN=LOC111009784 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.5e-82
Identity = 184/251 (73.31%), Postives = 194/251 (77.29%), Query Frame = 0


Query: 1   MADDDDDGGFFSPPSYKRYALSGKIMLGAIILLLFVVILMICLHLYVRLYLLSSSRRQ-P 60
           MADDDDD GFFSPPSYKRYALSGKIMLGAII+LLFVVILMICLHLYVRLYLLSS+RRQ P
Sbjct: 1   MADDDDD-GFFSPPSYKRYALSGKIMLGAIIVLLFVVILMICLHLYVRLYLLSSNRRQAP 60

Query: 61  RSRIRRRRRREHFVFVAEPR-IAAAAAPSRGLPQSILKSLPVFVHSKKPDPDLIYCAVCL 120
           R   RRR RR HFVF AEPR  AAAAAPSRGLPQSILKSLPVFVHS KPDPD I CAVCL
Sbjct: 61  R---RRRHRRAHFVFTAEPRHAAAAAAPSRGLPQSILKSLPVFVHSAKPDPDPICCAVCL 120

Query: 121 SEFEENEIGRIIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPELGSGSGPFVDPVEIAI 180
           SEFEENEIGRIIPKC HSFHVGCIDMWFYSHVTCPLCRSEV+PE GS + P V       
Sbjct: 121 SEFEENEIGRIIPKCKHSFHVGCIDMWFYSHVTCPLCRSEVQPETGSDNPPDVSVSIHDP 180

Query: 181 DVCESGSRSGE----EEPDRECPVEMAS-VELV---------DDESRHVNDMSDDGTSRA 236
           D+ E G  SG     EEP    P E+ S VELV         ++  R ++DMS  GTSR 
Sbjct: 181 DIPEPGPSSGSTRSGEEPGCPSPSELPSLVELVVASSEESISEEGLRQIDDMSVHGTSRT 240

[Close]

BLAST of HG10010366 vs. TAIR 10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2 )

HSP 1 Score: 165.6 bits (418), Expect = 4.9e-41
Identity = 100/185 (54.05%), Postives = 120/185 (64.86%), Query Frame = 0


Query: 17  KRYALSGKIMLGAIILLLFVVILMICLHLYVRLYLLSSSRRQPRSRIRRRRRREHFVFVA 76
           K YA+SGKIML AI++L FVVILM+ LHLY R YLL + RR  R R R RR    F F A
Sbjct: 22  KTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVF-FTA 81

Query: 77  EPRIAA-AAAPSRGLPQSILKSLPVFVHSKKPDPDLIYCAVCLSEFEENEIGRIIPKCNH 136
           +P  AA +   SRGL  +++KSLPVF  S +   D I CAVCLSEFEE+E GR++P C H
Sbjct: 82  DPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQH 141

Query: 137 SFHVGCIDMWFYSHVTCPLCRSEVKPELG--SGSGPFVDPVEIAID-----VCESGSRSG 193
           +FHV CIDMWF+SH TCPLCRS V+   G  S +      V IA+D     V E  S SG
Sbjct: 142 TFHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDPVLVIEPSSSSG 201

[Close]

BLAST of HG10010366 vs. TAIR 10
Match: AT2G47560.1 (RING/U-box superfamily protein )

HSP 1 Score: 127.5 bits (319), Expect = 1.5e-29
Identity = 73/170 (42.94%), Postives = 98/170 (57.65%), Query Frame = 0


Query: 19  YALSGKIMLGAIILLLFVVILMICLHLYVRLYLLSSSRRQPRSRIRRRRRREHFVFVAEP 78
           YAL+GKIML ++I+L   VI+++C H Y R        R+   RIRRR R       A P
Sbjct: 22  YALNGKIMLSSVIVLFVAVIMILCFHSYARWLF-----RRHNRRIRRRIRSHLRTLSASP 81

Query: 79  RIAAAAAPSRGLPQSILKSLPVFVHSKK---PDPDLIYCAVCLSEFEENEIGRIIPKCNH 138
           R        + L Q++L  +P+FV+S K   P  +   C+VCLSEFEE + GR++PKC H
Sbjct: 82  R-------DQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGH 141

Query: 139 SFHVGCIDMWFYSHVTCPLCRSEVKPE---LGSGSGPFVDPVEIAIDVCE 183
           SFHV CID WF S  TCPLCR+ V+P    + +GS     P+    + CE
Sbjct: 142 SFHVDCIDTWFRSRSTCPLCRAPVQPPFQVIETGSSSSSSPLTFPTEGCE 179

[Close]

BLAST of HG10010366 vs. TAIR 10
Match: AT3G62690.1 (AtL5 )

HSP 1 Score: 122.5 bits (306), Expect = 4.8e-28
Identity = 75/190 (39.47%), Postives = 108/190 (56.84%), Query Frame = 0


Query: 18  RYALSGKIMLGAIILLLFVVILMICLHLYVRLYLLSSSRRQPRSRIRRRRRREHFVFVAE 77
           RY+L+GKIML ++I+L   VIL++C H Y R      +RR       RRR   H   +A 
Sbjct: 21  RYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRR------IRRRISAHLRSLAA 80

Query: 78  PRIAAAAAPSRG-LPQSILKSLPVFVHS-KKPDPDLIYCAVCLSEFEENEIGRIIPKCNH 137
            R    ++ S   L  ++L+ +P+FV+S K  +  L  C+VCLSEFEE++ GR++PKC H
Sbjct: 81  ARDPTQSSSSLSPLDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGH 140

Query: 138 SFHVGCIDMWFYSHVTCPLCRSEVKPELGSGSGPFVDPVEIA--------IDVCESGSRS 197
            FHV CID WF S  +CPLCR+ V+P     + P  +P  +A        I+  E+GS S
Sbjct: 141 VFHVDCIDTWFRSRSSCPLCRAPVQP-----AQPVTEPEPVAAVFPSVKPIEDTEAGSSS 199

[Close]

BLAST of HG10010366 vs. TAIR 10
Match: AT4G15975.1 (RING/U-box superfamily protein )

HSP 1 Score: 119.8 bits (299), Expect = 3.1e-27
Identity = 71/153 (46.41%), Postives = 93/153 (60.78%), Query Frame = 0


Query: 26  MLGAIILLLFVVILMICLHLYVRLYLLSSSRRQPRSRIRRRRRREHFVFVAEPRIAAAAA 85
           ML   IL+L +VILM+ LHLY R YLL SS   P +R           F  +P     ++
Sbjct: 1   MLTTTILILLIVILMVSLHLYYRWYLLRSS---PFNRTTAAS-----TFFTDP-----SS 60

Query: 86  PSRGLPQSILKSLPVFVHSKKPDPDLIYCAVCLSEFEENEIGRIIPKCNHSFHVGCIDMW 145
              GL  SI+KSLP+F  S       + C+VCLSEF++NE GR++P C H+FHV CIDMW
Sbjct: 61  TPGGLNPSIIKSLPIFTFSAVTALFAMECSVCLSEFKDNESGRVMPNCKHTFHVDCIDMW 120

Query: 146 FYSHVTCPLCRSEVKPELGSGSGPFVDPVEIAI 179
           F+SH +CPLCRS ++P  G G    +D V I+I
Sbjct: 121 FHSHSSCPLCRSLIEPFAG-GVKSTMDEVAISI 139

[Close]

BLAST of HG10010366 vs. TAIR 10
Match: AT1G72310.1 (RING/U-box superfamily protein )

HSP 1 Score: 100.5 bits (249), Expect = 1.9e-21
Identity = 59/157 (37.58%), Postives = 86/157 (54.78%), Query Frame = 0


Query: 21  LSGKIMLGAIILLLFVVILMICLHLYVRLY------LLSSSRRQPRSR------------ 80
           ++ KI+L AII+L   V+ ++ LHLY +LY      L    ++Q + +            
Sbjct: 20  VTSKIILTAIIVLFMAVLFVLILHLYAKLYWWRIDQLQQQQQQQQQEQEQEEDQSSIAPP 79

Query: 81  IRRRRRREHFVFVAEPRIAAAAAPSRGLPQSILKSLPVFVHSKKPDPDLIYCAVCLSEFE 140
           +  RR+R  F+FV        A  + GL    L SLP+    +    D + C++CLSE  
Sbjct: 80  VVTRRQRRRFIFVP----GQDALSNTGLTSFELSSLPIVFFRQDSCKDGLECSICLSELV 139

Query: 141 ENEIGRIIPKCNHSFHVGCIDMWFYSHVTCPLCRSEV 160
           + +  R++PKCNHSFHV CIDMWF SH TCP+CR+ V
Sbjct: 140 KGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTV 172

The following BLAST results are available for this feature:

BLAST of HG10010366 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875154.1	1.8e-114	90.24	RING-H2 finger protein ATL2-like [Benincasa hispida]	[more]
XP_004150504.1	1.2e-105	84.55	RING-H2 finger protein ATL2 [Cucumis sativus] >KGN47424.1 hypothetical protein C...	[more]
XP_008458410.1	1.6e-105	85.43	PREDICTED: RING-H2 finger protein ATL2-like [Cucumis melo]	[more]
XP_023006465.1	7.5e-92	76.92	RING-H2 finger protein ATL2-like [Cucurbita maxima]	[more]
KAG7013653.1	1.3e-91	79.49	RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]

BLAST of HG10010366 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9T5	6.9e-40	54.05	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2	[more]
O22255	2.1e-28	42.94	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1	[more]
Q9LZJ6	6.7e-27	39.47	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]
Q8LF65	1.5e-26	46.41	RING-H2 finger protein ATL17 OS=Arabidopsis thaliana OX=3702 GN=ATL17 PE=2 SV=2	[more]
Q9XF63	2.7e-20	37.58	RING-H2 finger protein ATL3 OS=Arabidopsis thaliana OX=3702 GN=ATL3 PE=2 SV=1	[more]

BLAST of HG10010366 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KF25	5.8e-106	84.55	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G318710 P...	[more]
A0A1S3C7X4	7.6e-106	85.43	RING-H2 finger protein ATL2-like OS=Cucumis melo OX=3656 GN=LOC103497834 PE=4 SV...	[more]
A0A6J1L074	3.6e-92	76.92	RING-H2 finger protein ATL2-like OS=Cucurbita maxima OX=3661 GN=LOC111499181 PE=...	[more]
A0A6J1H376	1.1e-91	79.49	RING-H2 finger protein ATL2-like OS=Cucurbita moschata OX=3662 GN=LOC111459976 P...	[more]
A0A6J1CAT0	1.5e-82	73.31	RING-H2 finger protein ATL2-like OS=Momordica charantia OX=3673 GN=LOC111009784 ...	[more]

BLAST of HG10010366 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16720.1	4.9e-41	54.05	TOXICOS EN LEVADURA 2	[more]
AT2G47560.1	1.5e-29	42.94	RING/U-box superfamily protein	[more]
AT3G62690.1	4.8e-28	39.47	AtL5	[more]
AT4G15975.1	3.1e-27	46.41	RING/U-box superfamily protein	[more]
AT1G72310.1	1.9e-21	37.58	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 114..155 e-value: 4.0E-6 score: 36.3
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 113..156 e-value: 3.5E-11 score: 43.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 114..156 score: 12.474524
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 79..162 e-value: 6.4E-18 score: 66.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..230
None	No IPR available	PANTHER	PTHR45768:SF34	RING-H2 FINGER PROTEIN ATL64	coord: 17..165
None	No IPR available	PANTHER	PTHR45768	E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE	coord: 17..165
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 114..156 e-value: 2.31348E-16 score: 68.8759
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 95..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10010366.1	HG10010366.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane