HG10010277 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAATTGGAGTAGAAAATGATGATTTGTTGTTTGCAGAGCTTACTAGAAGGATTTCGCTTCTCATTATGGACGACGATGAGCTTCCGATCGTTCATACGGTTTGTTTTACCTCCCTCGTTTACCTCTTTTGGTTATAAAGTTAGTACTTCGCTTTTAGAATTGTGTACTTGTTATTAGATTTGAATTTTTATGTTTGTGTTTGTTTATTGTTTGATAAGTTAGTTAGTGCTCTTTGTTTATGGTTACGAAACAGTTCTCAAAATTAAATATAATAAGTGCTAAACTAATATGAAACACGAACTTAAAAGTTTAGGGAGCAAGAATGTTTTAAAAAATTAATACTTAAATTGAATATTTACCATTACTAAAGTTTTAGATATGTTTGACCTATTAAAAACTATTTAAAATACAAATTTAATTAGACGAAAACGAAATGAGGTATTGGGGCTTGAGTTCAACTTAAGCCGAGATTTGATAAGTTTGCAATTTAGACAGAGGGTTTAACAAGACCAAGTTTGGGCAAGGTACAAGGTTACAAAGTTTAAGGTTTAGAAACAATGAGTTTCATGAGTTTGGATGGTGAGATACCCATGAAGTCAATGTCGGTTGTGCTTAAGAAGCTAATTCACGATTCAAAGGATTTATAATAATTTAGGGTTCAGACTTGTAATTCGACCTATTATTAATGTTTCAGGACTTAACTAGAACAGTAAACCAACTTCGACCCAGGCAATTACCATTACTGGTGGATTACGAGAACGATTTAGTAAGGGAGAGCAAAGGCACTGGAGTTTTCATTCCAACGCGGTTACCACCGCCTAAGAGGAAGCAAAGAAATGGCACCGGCTATAGAATCAAATCAGAAAACAAGAGGCTCAATCATCAACCCTCTTCAACTTATTATTGTAAGCCCAAGAAAGGCTGA ATGGAAATTGGAGTAGAAAATGATGATTTGTTGTTTGCAGAGCTTACTAGAAGGATTTCGCTTCTCATTATGGACGACGATGAGCTTCCGATCGTTCATACGGACTTAACTAGAACAGTAAACCAACTTCGACCCAGGCAATTACCATTACTGGTGGATTACGAGAACGATTTAGTAAGGGAGAGCAAAGGCACTGGAGTTTTCATTCCAACGCGGTTACCACCGCCTAAGAGGAAGCAAAGAAATGGCACCGGCTATAGAATCAAATCAGAAAACAAGAGGCTCAATCATCAACCCTCTTCAACTTATTATTGTAAGCCCAAGAAAGGCTGA ATGGAAATTGGAGTAGAAAATGATGATTTGTTGTTTGCAGAGCTTACTAGAAGGATTTCGCTTCTCATTATGGACGACGATGAGCTTCCGATCGTTCATACGGACTTAACTAGAACAGTAAACCAACTTCGACCCAGGCAATTACCATTACTGGTGGATTACGAGAACGATTTAGTAAGGGAGAGCAAAGGCACTGGAGTTTTCATTCCAACGCGGTTACCACCGCCTAAGAGGAAGCAAAGAAATGGCACCGGCTATAGAATCAAATCAGAAAACAAGAGGCTCAATCATCAACCCTCTTCAACTTATTATTGTAAGCCCAAGAAAGGCTGA MEIGVENDDLLFAELTRRISLLIMDDDELPIVHTDLTRTVNQLRPRQLPLLVDYENDLVRESKGTGVFIPTRLPPPKRKQRNGTGYRIKSENKRLNHQPSSTYYCKPKKG Homology
BLAST of HG10010277 vs. NCBI nr
Match: XP_038875510.1 (uncharacterized protein LOC120067937 [Benincasa hispida]) HSP 1 Score: 186.0 bits (471), Expect = 1.7e-43 Identity = 90/110 (81.82%), Postives = 100/110 (90.91%), Query Frame = 0
BLAST of HG10010277 vs. NCBI nr
Match: XP_004149266.1 (uncharacterized protein LOC101220151 [Cucumis sativus] >KGN46966.1 hypothetical protein Csa_020778 [Cucumis sativus]) HSP 1 Score: 178.3 bits (451), Expect = 3.5e-41 Identity = 90/109 (82.57%), Postives = 98/109 (89.91%), Query Frame = 0
BLAST of HG10010277 vs. NCBI nr
Match: XP_022930457.1 (uncharacterized protein LOC111436898 [Cucurbita moschata]) HSP 1 Score: 177.2 bits (448), Expect = 7.9e-41 Identity = 89/109 (81.65%), Postives = 96/109 (88.07%), Query Frame = 0
BLAST of HG10010277 vs. NCBI nr
Match: XP_023521928.1 (uncharacterized protein LOC111785772 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 176.4 bits (446), Expect = 1.3e-40 Identity = 88/109 (80.73%), Postives = 96/109 (88.07%), Query Frame = 0
BLAST of HG10010277 vs. NCBI nr
Match: KAG6593910.1 (hypothetical protein SDJN03_13386, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 175.6 bits (444), Expect = 2.3e-40 Identity = 88/109 (80.73%), Postives = 96/109 (88.07%), Query Frame = 0
BLAST of HG10010277 vs. ExPASy TrEMBL
Match: A0A0A0KGT1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G153490 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 1.7e-41 Identity = 90/109 (82.57%), Postives = 98/109 (89.91%), Query Frame = 0
BLAST of HG10010277 vs. ExPASy TrEMBL
Match: A0A6J1EQJ8 (uncharacterized protein LOC111436898 OS=Cucurbita moschata OX=3662 GN=LOC111436898 PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 3.8e-41 Identity = 89/109 (81.65%), Postives = 96/109 (88.07%), Query Frame = 0
BLAST of HG10010277 vs. ExPASy TrEMBL
Match: A0A5A7SW60 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00710 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 2.5e-40 Identity = 90/107 (84.11%), Postives = 97/107 (90.65%), Query Frame = 0
BLAST of HG10010277 vs. ExPASy TrEMBL
Match: A0A1S3C8R0 (uncharacterized protein LOC103497931 OS=Cucumis melo OX=3656 GN=LOC103497931 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 2.5e-40 Identity = 90/107 (84.11%), Postives = 97/107 (90.65%), Query Frame = 0
BLAST of HG10010277 vs. ExPASy TrEMBL
Match: A0A6J1KEC6 (uncharacterized protein LOC111494227 OS=Cucurbita maxima OX=3661 GN=LOC111494227 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.1e-39 Identity = 86/109 (78.90%), Postives = 95/109 (87.16%), Query Frame = 0
BLAST of HG10010277 vs. TAIR 10
Match: AT5G19190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G06070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 43.5 bits (101), Expect = 1.3e-04 Identity = 33/99 (33.33%), Postives = 51/99 (51.52%), Query Frame = 0
BLAST of HG10010277 vs. TAIR 10
Match: AT3G06070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19190.1); Has 33 Blast hits to 33 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.1 bits (100), Expect = 1.7e-04 Identity = 28/84 (33.33%), Postives = 49/84 (58.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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