HG10010240 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGAAATAGAAGTAGTGAAGTGTGAGTGTTGTGGGTTAAAAGAAGAATGCACAAAAGATTATATTAGTGAAGTGAAGGCTAATTTCGACGCTAAATGGCTTTGTGGCCTTTGTTCTCAAGCCGTCGGTGACGAAATTTTGTTCAGATCCAAAAACAACCACCACTCGCCGCCGTCGTCTGGAGGAATTCAAGACGCCGTTAACGCTCACATGCTTTTCTGCCGTAAGTTTAAATCTAACCCTGCCGTTAGAGTCGCTGACGCCATGAAGCAAATCTTGAGAAGGCGCTCAACCGACTTGTCGTCTCAATCCTCTTCTTCTACTAACAATTTCTCCACTTCTAATCCTACCACTTCTTCTTCCCAGGTTCCCGACATGTCGTCTTTCTCTTCCCTTCGATAA ATGGATGAAATAGAAGTAGTGAAGTGTGAGTGTTGTGGGTTAAAAGAAGAATGCACAAAAGATTATATTAGTGAAGTGAAGGCTAATTTCGACGCTAAATGGCTTTGTGGCCTTTGTTCTCAAGCCGTCGGTGACGAAATTTTGTTCAGATCCAAAAACAACCACCACTCGCCGCCGTCGTCTGGAGGAATTCAAGACGCCGTTAACGCTCACATGCTTTTCTGCCGTAAGTTTAAATCTAACCCTGCCGTTAGAGTCGCTGACGCCATGAAGCAAATCTTGAGAAGGCGCTCAACCGACTTGTCGTCTCAATCCTCTTCTTCTACTAACAATTTCTCCACTTCTAATCCTACCACTTCTTCTTCCCAGGTTCCCGACATGTCGTCTTTCTCTTCCCTTCGATAA ATGGATGAAATAGAAGTAGTGAAGTGTGAGTGTTGTGGGTTAAAAGAAGAATGCACAAAAGATTATATTAGTGAAGTGAAGGCTAATTTCGACGCTAAATGGCTTTGTGGCCTTTGTTCTCAAGCCGTCGGTGACGAAATTTTGTTCAGATCCAAAAACAACCACCACTCGCCGCCGTCGTCTGGAGGAATTCAAGACGCCGTTAACGCTCACATGCTTTTCTGCCGTAAGTTTAAATCTAACCCTGCCGTTAGAGTCGCTGACGCCATGAAGCAAATCTTGAGAAGGCGCTCAACCGACTTGTCGTCTCAATCCTCTTCTTCTACTAACAATTTCTCCACTTCTAATCCTACCACTTCTTCTTCCCAGGTTCCCGACATGTCGTCTTTCTCTTCCCTTCGATAA MDEIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPSSGGIQDAVNAHMLFCRKFKSNPAVRVADAMKQILRRRSTDLSSQSSSSTNNFSTSNPTTSSSQVPDMSSFSSLR Homology
BLAST of HG10010240 vs. NCBI nr
Match: XP_038875601.1 (pre-mRNA-splicing factor CWC22 homolog [Benincasa hispida]) HSP 1 Score: 242.7 bits (618), Expect = 1.9e-60 Identity = 130/142 (91.55%), Postives = 131/142 (92.25%), Query Frame = 0
BLAST of HG10010240 vs. NCBI nr
Match: KAA0040802.1 (hypothetical protein E6C27_scaffold333G00170 [Cucumis melo var. makuwa] >TYK17783.1 hypothetical protein E5676_scaffold306G00250 [Cucumis melo var. makuwa]) HSP 1 Score: 222.6 bits (566), Expect = 2.0e-54 Identity = 116/136 (85.29%), Postives = 123/136 (90.44%), Query Frame = 0
BLAST of HG10010240 vs. NCBI nr
Match: XP_004139880.3 (uncharacterized protein LOC101209523 [Cucumis sativus]) HSP 1 Score: 213.0 bits (541), Expect = 1.6e-51 Identity = 115/139 (82.73%), Postives = 121/139 (87.05%), Query Frame = 0
BLAST of HG10010240 vs. NCBI nr
Match: KAG6593885.1 (hypothetical protein SDJN03_13361, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 188.0 bits (476), Expect = 5.4e-44 Identity = 104/132 (78.79%), Postives = 112/132 (84.85%), Query Frame = 0
BLAST of HG10010240 vs. NCBI nr
Match: KAG7026232.1 (hypothetical protein SDJN02_12731, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 186.4 bits (472), Expect = 1.6e-43 Identity = 103/132 (78.03%), Postives = 112/132 (84.85%), Query Frame = 0
BLAST of HG10010240 vs. ExPASy TrEMBL
Match: A0A5D3D0Q9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00250 PE=4 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 9.7e-55 Identity = 116/136 (85.29%), Postives = 123/136 (90.44%), Query Frame = 0
BLAST of HG10010240 vs. ExPASy TrEMBL
Match: A0A0A0K5L1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G234115 PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 7.7e-52 Identity = 115/139 (82.73%), Postives = 121/139 (87.05%), Query Frame = 0
BLAST of HG10010240 vs. ExPASy TrEMBL
Match: A0A6J1KCY5 (uncharacterized protein LOC111494477 OS=Cucurbita maxima OX=3661 GN=LOC111494477 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 3.9e-40 Identity = 95/124 (76.61%), Postives = 105/124 (84.68%), Query Frame = 0
BLAST of HG10010240 vs. ExPASy TrEMBL
Match: V7BBM9 (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G058200g PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 3.6e-33 Identity = 83/128 (64.84%), Postives = 98/128 (76.56%), Query Frame = 0
BLAST of HG10010240 vs. ExPASy TrEMBL
Match: A0A2N9E577 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1998 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 4.7e-33 Identity = 85/129 (65.89%), Postives = 98/129 (75.97%), Query Frame = 0
BLAST of HG10010240 vs. TAIR 10
Match: AT3G22540.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 122.9 bits (307), Expect = 2.0e-28 Identity = 66/117 (56.41%), Postives = 82/117 (70.09%), Query Frame = 0
BLAST of HG10010240 vs. TAIR 10
Match: AT4G14819.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 120.2 bits (300), Expect = 1.3e-27 Identity = 65/116 (56.03%), Postives = 77/116 (66.38%), Query Frame = 0
BLAST of HG10010240 vs. TAIR 10
Match: AT1G79770.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 86.3 bits (212), Expect = 2.1e-17 Identity = 43/98 (43.88%), Postives = 59/98 (60.20%), Query Frame = 0
BLAST of HG10010240 vs. TAIR 10
Match: AT1G72510.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 80.9 bits (198), Expect = 8.7e-16 Identity = 43/100 (43.00%), Postives = 60/100 (60.00%), Query Frame = 0
BLAST of HG10010240 vs. TAIR 10
Match: AT1G72510.2 (Protein of unknown function (DUF1677) ) HSP 1 Score: 80.9 bits (198), Expect = 8.7e-16 Identity = 43/100 (43.00%), Postives = 60/100 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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