HG10010234 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10010234
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Non-specific lipid-transfer protein-like protein
Location	Chr06: 20129059 .. 20130370 (+)
RNA-Seq Expression	HG10010234
Synteny	HG10010234

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTGAGTATTGTTATGGCAATGGTGGCCTTGTTGTTATGGACAGGAGAAGCAATAGCACAGTCATCGGATTGTAGCAATGTGTTGATTAGCCTCTCGCCTTGCCTCAGTTACATCACTGGCAACTCCTCCATGCCGTCTCCGACCTGCTGCTCGCAGTTGGCCACCGTCATCAGCTCCCAACCGCAGTGCCTTTGTCAAGTCCTCAATAATGGCGGCGGAGCCTCCGCGCTTGGGGGGCTCAATGTCAACCAAACTCTGGCTCTTGCACTCCCTGGTGCTTGTCGTCTTCAAACTCCGCCCATTTCCGGCTGTAACGGTAAGATTTCTCCACAAATTTAAGTGTAGCCAACAACTTTTTACTATTTTAAACAACTAAATTATTATTTTTTTTAGTACAATAATTATAGGATGAGAGATCAAACTTTTAACGTCTAAAAATGTAGACCATAGCTAAACTAAGCTAACTTTACCAACAACAAAATTGGTGTTAATTATTGATCTCAAAATGAATAATTTTGCAAATAGGTAAAAGTAAACCTGTATATTTTTTAAAATGTTCTATTAAATTTAAATCTAATTTCACTTTCTCAACTTTTCATGTTCGAATGACAAAGCTATATTTTTTTTAACCGTCTCAAGAAAAGCAAAAAAGAAGGGAAAAAAAACTCATTGGTACCGGACATGAGGGAATGTTAGGAGTTTGGTCATTTTCATCATGACGAGAATAAAAAATTTCATTAAGTTATAGGATAATGATTAGTGCACATAATTCAATGCTCTCCTTTTCCTAACATACTAAAAATAAAAATAAAATTTAATTTTTTAAAAGAAATTGCCACATGACACTGTTATTGAATACTGCATCGGTTGTACAAAAGATGGTAAGGCGACACCCAATTTTTTTTTTCTAAGTTATATATAATCTTTTCAATAATGGAACAATAATTTTGCTATGATTACTTGAAAGATTTATTAGACAATTTTTTAATATTGGTTCGACTAGATTTTACTAAATTTTTGTATAGTCCATGTACCTATAATTTGACATGATTTGTGGACTAGATTTATAATATAACCTTAAATCAATTATGAGTTTACTACTAATTTAAGGAAAGTTGTCTCTACCCAAGTGTCAAAATGAGCTTAGTTTAAAGATGATTAATTGATGCTAGTACTAAATGATGGCTTGTTAATTCTAGTAGCCGCTTCTCCGACAAACGACAGTCCAGCAGAAGCACCAGAATCTCCAAGCGAGGAGCCTACCGATACGACTAAAACTAGAACAATCAGTTTAATTTCTAAATAG

mRNA sequence

ATGGAAGTGAGTATTGTTATGGCAATGGTGGCCTTGTTGTTATGGACAGGAGAAGCAATAGCACAGTCATCGGATTGTAGCAATGTGTTGATTAGCCTCTCGCCTTGCCTCAGTTACATCACTGGCAACTCCTCCATGCCGTCTCCGACCTGCTGCTCGCAGTTGGCCACCGTCATCAGCTCCCAACCGCAGTGCCTTTGTCAAGTCCTCAATAATGGCGGCGGAGCCTCCGCGCTTGGGGGGCTCAATGTCAACCAAACTCTGGCTCTTGCACTCCCTGGTGCTTGTCGTCTTCAAACTCCGCCCATTTCCGGCTGTAACGCCGCTTCTCCGACAAACGACAGTCCAGCAGAAGCACCAGAATCTCCAAGCGAGGAGCCTACCGATACGACTAAAACTAGAACAATCAGTTTAATTTCTAAATAG

Coding sequence (CDS)

ATGGAAGTGAGTATTGTTATGGCAATGGTGGCCTTGTTGTTATGGACAGGAGAAGCAATAGCACAGTCATCGGATTGTAGCAATGTGTTGATTAGCCTCTCGCCTTGCCTCAGTTACATCACTGGCAACTCCTCCATGCCGTCTCCGACCTGCTGCTCGCAGTTGGCCACCGTCATCAGCTCCCAACCGCAGTGCCTTTGTCAAGTCCTCAATAATGGCGGCGGAGCCTCCGCGCTTGGGGGGCTCAATGTCAACCAAACTCTGGCTCTTGCACTCCCTGGTGCTTGTCGTCTTCAAACTCCGCCCATTTCCGGCTGTAACGCCGCTTCTCCGACAAACGACAGTCCAGCAGAAGCACCAGAATCTCCAAGCGAGGAGCCTACCGATACGACTAAAACTAGAACAATCAGTTTAATTTCTAAATAG

Protein sequence

MEVSIVMAMVALLLWTGEAIAQSSDCSNVLISLSPCLSYITGNSSMPSPTCCSQLATVISSQPQCLCQVLNNGGGASALGGLNVNQTLALALPGACRLQTPPISGCNAASPTNDSPAEAPESPSEEPTDTTKTRTISLISK

Homology

[Close]

BLAST of HG10010234 vs. NCBI nr
Match: XP_008447158.1 (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis melo] >XP_008447159.1 PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis melo])

HSP 1 Score: 206.1 bits (523), Expect = 2.0e-49
Identity = 105/136 (77.21%), Postives = 117/136 (86.03%), Query Frame = 0


Query: 1   MEVSIVMAMVALLLWTGEAIAQSSDCSNVLISLSPCLSYITGNSSMPSPTCCSQLATVIS 60
           MEVSIV+ MV LLLW GEA+ QSSDC+NVLISLSPCL+YI GNSS PSP+CCSQL TV+ 
Sbjct: 6   MEVSIVLGMVGLLLWAGEAVGQSSDCNNVLISLSPCLNYINGNSSTPSPSCCSQLTTVVR 65

Query: 61  SQPQCLCQVLNNGGGASALGGLNVNQTLALALPGACRLQTPPISGCNAASPTNDSPAEAP 120
           SQPQCLCQV +NGGGASALGGLNVNQTLALALP ACRLQTPPIS CNA SPT+DSPAE P
Sbjct: 66  SQPQCLCQVFDNGGGASALGGLNVNQTLALALPAACRLQTPPISRCNATSPTDDSPAETP 125

Query: 121 ESPSEEPTDTTKTRTI 137
           +S +EEPT+    R +
Sbjct: 126 KSSNEEPTEGGSRRNV 141

[Close]

BLAST of HG10010234 vs. NCBI nr
Match: KAA0048682.1 (non-specific lipid-transfer protein-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 170.2 bits (430), Expect = 1.2e-38
Identity = 83/99 (83.84%), Postives = 89/99 (89.90%), Query Frame = 0


Query: 9   MVALLLWTGEAIAQSSDCSNVLISLSPCLSYITGNSSMPSPTCCSQLATVISSQPQCLCQ 68
           MV LLLW GEA+ QSSDC+NVLISLSPCL+YI GNSS PSP+CCSQL TV+ SQPQCLCQ
Sbjct: 1   MVGLLLWAGEAVGQSSDCNNVLISLSPCLNYINGNSSTPSPSCCSQLTTVVRSQPQCLCQ 60

Query: 69  VLNNGGGASALGGLNVNQTLALALPGACRLQTPPISGCN 108
           V +NGGGASALGGLNVNQTLALALP ACRLQTPPIS CN
Sbjct: 61  VFDNGGGASALGGLNVNQTLALALPAACRLQTPPISRCN 99

[Close]

BLAST of HG10010234 vs. NCBI nr
Match: XP_022138714.1 (non-specific lipid-transfer protein-like protein At2g13820 [Momordica charantia])

HSP 1 Score: 167.2 bits (422), Expect = 1.0e-37
Identity = 97/124 (78.23%), Postives = 106/124 (85.48%), Query Frame = 0


Query: 5   IVMAMVAL-LLWTGEAIAQSSDCSNVLISLSPCLSYITGNSSMPSPTCCSQLATVISSQP 64
           +V+ +VA+ +LW G A AQSSDCSNVLISLSPCL+YITGNSS PS  CCSQL +V+ SQP
Sbjct: 11  VVLVVVAMTVLWAG-AGAQSSDCSNVLISLSPCLNYITGNSSTPSSRCCSQLGSVVRSQP 70

Query: 65  QCLCQVLNNGGGASALGGLNVNQTLALALPGACRLQTPPISGCNAASPTNDSPAEAPESP 124
           QCLCQVLN  GGASAL G+NVNQTLALALPGACRLQTPPIS CNA SP  DSPAE PESP
Sbjct: 71  QCLCQVLN--GGASAL-GINVNQTLALALPGACRLQTPPISRCNANSPA-DSPAETPESP 129

Query: 125 SEEP 128
           SEEP
Sbjct: 131 SEEP 129

[Close]

BLAST of HG10010234 vs. NCBI nr
Match: KCW60709.1 (hypothetical protein EUGRSUZ_H03442 [Eucalyptus grandis])

HSP 1 Score: 151.8 bits (382), Expect = 4.6e-33
Identity = 92/134 (68.66%), Postives = 111/134 (82.84%), Query Frame = 0


Query: 1   MEVSIVMAMVALLLWTGEAIAQSSDCSNVLISLSPCLSYITGNSSMPSPTCCSQLATVIS 60
           ME S+V+A VA +LW G A AQSS C+NVLISLSPCL+YITGNSS  SPTCC+QLA+V+ 
Sbjct: 6   MEASLVLAAVA-MLWVG-AAAQSS-CTNVLISLSPCLNYITGNSSTASPTCCTQLASVVR 65

Query: 61  SQPQCLCQVLNNGGGASALGGLNVNQTLALALPGACRLQTPPISGCNAASPTNDSPAEAP 120
           SQPQCLCQVL +GGG+S   G+NVNQT ALALPGAC++QTPPIS CNAASP  +SP+E P
Sbjct: 66  SQPQCLCQVL-SGGGSSL--GINVNQTQALALPGACKVQTPPISSCNAASPA-ESPSETP 125

Query: 121 ESPSEEPT-DTTKT 134
           +SP+  P+ D +KT
Sbjct: 126 DSPTTVPSGDGSKT 132

[Close]

BLAST of HG10010234 vs. NCBI nr
Match: XP_010024255.2 (non-specific lipid transfer protein GPI-anchored 19 [Eucalyptus grandis])

HSP 1 Score: 150.6 bits (379), Expect = 1.0e-32
Identity = 91/134 (67.91%), Postives = 111/134 (82.84%), Query Frame = 0


Query: 1   MEVSIVMAMVALLLWTGEAIAQSSDCSNVLISLSPCLSYITGNSSMPSPTCCSQLATVIS 60
           ME ++V+A VA +LW G A AQSS C+NVLISLSPCL+YITGNSS  SPTCC+QLA+V+ 
Sbjct: 6   MEAALVLAAVA-MLWVG-AAAQSS-CTNVLISLSPCLNYITGNSSTASPTCCTQLASVVR 65

Query: 61  SQPQCLCQVLNNGGGASALGGLNVNQTLALALPGACRLQTPPISGCNAASPTNDSPAEAP 120
           SQPQCLCQVL +GGG+S   G+NVNQT ALALPGAC++QTPPIS CNAASP  +SP+E P
Sbjct: 66  SQPQCLCQVL-SGGGSSL--GINVNQTQALALPGACKVQTPPISSCNAASPA-ESPSETP 125

Query: 121 ESPSEEPT-DTTKT 134
           +SP+  P+ D +KT
Sbjct: 126 DSPTTVPSGDGSKT 132

[Close]

BLAST of HG10010234 vs. ExPASy Swiss-Prot
Match: Q9LJ86 (Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=3702 GN=LTPG5 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 5.6e-26
Identity = 67/137 (48.91%), Postives = 89/137 (64.96%), Query Frame = 0


Query: 1   MEVSIVMAMVALLLWTGEAIAQSSDCSNVLISLSPCLSYITGNSSMPSPTCCSQLATVIS 60
           ME+ +V   V + + +   ++  S C+N LIS+SPCL+YITGNS+ P+  CC+QL+ V+ 
Sbjct: 3   MEMGLVFLTVFMAVMSSTMVSAQSSCTNALISMSPCLNYITGNSTSPNQQCCNQLSRVVQ 62

Query: 61  SQPQCLCQVLNNGGGASALGGLNVNQTLALALPGACRLQTPPISGCN----AASPTNDSP 120
           S P CLCQVLN GG      G+NVNQT AL LP AC +QTPP+S CN        T+DSP
Sbjct: 63  SSPDCLCQVLNGGGSQL---GINVNQTQALGLPRACNVQTPPVSRCNTGGGGGGSTSDSP 122

Query: 121 AEAPESPSEEPTDTTKT 134
           AE+P S    P + +KT
Sbjct: 123 AESPNSSG--PGNGSKT 134

[Close]

BLAST of HG10010234 vs. ExPASy Swiss-Prot
Match: Q7EB72 (Non-specific lipid transfer protein GPI-anchored 15 OS=Arabidopsis thaliana OX=3702 GN=LTPG15 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.9e-21
Identity = 66/135 (48.89%), Postives = 85/135 (62.96%), Query Frame = 0


Query: 4   SIVMAMVALL--LWTGEAIAQSSDCSNVLISLSPCLSYITGNSSMPSPTCCSQLATVISS 63
           S  +  VAL+  LW+      SS C + L +LSPCLSYITGNS+ PS  CCS+L +VI S
Sbjct: 6   SYAITFVALVAALWSVTKAQPSSSCVSTLTTLSPCLSYITGNSTTPSQPCCSRLDSVIKS 65

Query: 64  QPQCLCQVLNNGGGASALGGLNVNQTLALALPGACRLQTPPISGCNAAS-PTNDSPAEAP 123
            PQC+C  +N+        GLN+N+T AL LP AC +QTPP++ CNAA+ PT   PA   
Sbjct: 66  SPQCICSAVNS---PIPNIGLNINRTQALQLPNACNIQTPPLTQCNAATGPTAQPPA--- 125

Query: 124 ESPSEEPTDTTKTRT 136
            SP+E+  D T T T
Sbjct: 126 PSPTEKTPDVTLTPT 134

[Close]

BLAST of HG10010234 vs. ExPASy Swiss-Prot
Match: Q2PE59 (Non-specific lipid transfer protein GPI-anchored 26 OS=Arabidopsis thaliana OX=3702 GN=LTPG26 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 3.5e-20
Identity = 52/113 (46.02%), Postives = 75/113 (66.37%), Query Frame = 0


Query: 1   MEVSIVMAMVALLLWTGEAIAQSSDCSNVLISLSPCLSYITGNSSMPSPTCCSQLATVIS 60
           M+  + + +   L+     ++  S C+NVLIS++PCLS+IT N+S+PS  CC+QLA V+ 
Sbjct: 1   MKPRMCLILFIALMRVMSIVSAQSSCTNVLISMAPCLSFITQNTSLPSQQCCNQLAHVVR 60

Query: 61  SQPQCLCQVLNNGGGASALGGLNVNQTLALALPGACRLQTPPISGCNAASPTN 114
              +CLCQVL+ GG      G+NVN+T ALALP AC ++TPP S C++ S  N
Sbjct: 61  YSSECLCQVLDGGGSQL---GINVNETQALALPKACHVETPPASRCHSGSSVN 110

[Close]

BLAST of HG10010234 vs. ExPASy Swiss-Prot
Match: F4HZB9 (Non-specific lipid transfer protein GPI-anchored 19 OS=Arabidopsis thaliana OX=3702 GN=LTPG19 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 9.0e-16
Identity = 57/135 (42.22%), Postives = 81/135 (60.00%), Query Frame = 0


Query: 5   IVMAMVALLLWT---GEAIAQSSDCSNVLISLSPCLSYITGNSSMPSPTCCSQLATVISS 64
           +++A++AL++ T   G A    + C + L SLSPCL Y+ G SS PS +CC Q +TV+ S
Sbjct: 1   MILAILALVIATFLYGGATTVQAGCRDTLTSLSPCLYYLNGGSSSPSWSCCRQFSTVVQS 60

Query: 65  QPQCLCQVLNNGGGASALGGLNVNQTLALALPGACRLQTPPISGCNAAS--PTN---DSP 124
            P+CLC V+N+    S+  G   N+TLAL LP AC +QTP  S CN     PT    ++P
Sbjct: 61  SPECLCSVVNS--NESSFYGFKFNRTLALNLPTACNVQTPSPSLCNTGGNVPTTLPANTP 120

Query: 125 AEAPESPSEEPTDTT 132
             +P S +  P+ TT
Sbjct: 121 VGSPRS-APSPSGTT 132

[Close]

BLAST of HG10010234 vs. ExPASy Swiss-Prot
Match: Q9ZQI8 (Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3702 GN=LTPG11 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.1e-12
Identity = 42/119 (35.29%), Postives = 70/119 (58.82%), Query Frame = 0


Query: 4   SIVMAMVALLLWTGEAIAQSSDCSNVLISLSPCLSYITGNSSM--PSPTCCSQLATVISS 63
           +I+M    + L +GE    + DCS+++++++ CLS++T  S++  P  TCCS L TV+ +
Sbjct: 5   TILMIFSVVALMSGERAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRT 64

Query: 64  QPQCLCQVLNNGGGASALGGLNVNQTLALALPGACRLQTPPISGCNAASPTNDSPAEAP 121
            P+CLC+   N G      GL ++ + A +LP  C++  PP + C   S + D PA AP
Sbjct: 65  GPECLCEAFKNSGSL----GLTLDLSKAASLPSVCKVAAPPSARC-GLSVSGDPPATAP 118

[Close]

BLAST of HG10010234 vs. ExPASy TrEMBL
Match: A0A1S3BG77 (non-specific lipid-transfer protein-like protein At2g13820 OS=Cucumis melo OX=3656 GN=LOC103489675 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 9.8e-50
Identity = 105/136 (77.21%), Postives = 117/136 (86.03%), Query Frame = 0


Query: 1   MEVSIVMAMVALLLWTGEAIAQSSDCSNVLISLSPCLSYITGNSSMPSPTCCSQLATVIS 60
           MEVSIV+ MV LLLW GEA+ QSSDC+NVLISLSPCL+YI GNSS PSP+CCSQL TV+ 
Sbjct: 6   MEVSIVLGMVGLLLWAGEAVGQSSDCNNVLISLSPCLNYINGNSSTPSPSCCSQLTTVVR 65

Query: 61  SQPQCLCQVLNNGGGASALGGLNVNQTLALALPGACRLQTPPISGCNAASPTNDSPAEAP 120
           SQPQCLCQV +NGGGASALGGLNVNQTLALALP ACRLQTPPIS CNA SPT+DSPAE P
Sbjct: 66  SQPQCLCQVFDNGGGASALGGLNVNQTLALALPAACRLQTPPISRCNATSPTDDSPAETP 125

Query: 121 ESPSEEPTDTTKTRTI 137
           +S +EEPT+    R +
Sbjct: 126 KSSNEEPTEGGSRRNV 141

[Close]

BLAST of HG10010234 vs. ExPASy TrEMBL
Match: A0A5A7TYP5 (Non-specific lipid-transfer protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17094G00010 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 6.0e-39
Identity = 83/99 (83.84%), Postives = 89/99 (89.90%), Query Frame = 0


Query: 9   MVALLLWTGEAIAQSSDCSNVLISLSPCLSYITGNSSMPSPTCCSQLATVISSQPQCLCQ 68
           MV LLLW GEA+ QSSDC+NVLISLSPCL+YI GNSS PSP+CCSQL TV+ SQPQCLCQ
Sbjct: 1   MVGLLLWAGEAVGQSSDCNNVLISLSPCLNYINGNSSTPSPSCCSQLTTVVRSQPQCLCQ 60

Query: 69  VLNNGGGASALGGLNVNQTLALALPGACRLQTPPISGCN 108
           V +NGGGASALGGLNVNQTLALALP ACRLQTPPIS CN
Sbjct: 61  VFDNGGGASALGGLNVNQTLALALPAACRLQTPPISRCN 99

[Close]

BLAST of HG10010234 vs. ExPASy TrEMBL
Match: A0A6J1CAW2 (non-specific lipid-transfer protein-like protein At2g13820 OS=Momordica charantia OX=3673 GN=LOC111009815 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 5.1e-38
Identity = 97/124 (78.23%), Postives = 106/124 (85.48%), Query Frame = 0


Query: 5   IVMAMVAL-LLWTGEAIAQSSDCSNVLISLSPCLSYITGNSSMPSPTCCSQLATVISSQP 64
           +V+ +VA+ +LW G A AQSSDCSNVLISLSPCL+YITGNSS PS  CCSQL +V+ SQP
Sbjct: 11  VVLVVVAMTVLWAG-AGAQSSDCSNVLISLSPCLNYITGNSSTPSSRCCSQLGSVVRSQP 70

Query: 65  QCLCQVLNNGGGASALGGLNVNQTLALALPGACRLQTPPISGCNAASPTNDSPAEAPESP 124
           QCLCQVLN  GGASAL G+NVNQTLALALPGACRLQTPPIS CNA SP  DSPAE PESP
Sbjct: 71  QCLCQVLN--GGASAL-GINVNQTLALALPGACRLQTPPISRCNANSPA-DSPAETPESP 129

Query: 125 SEEP 128
           SEEP
Sbjct: 131 SEEP 129

[Close]

BLAST of HG10010234 vs. ExPASy TrEMBL
Match: A0A059B3V7 (AAI domain-containing protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_H03442 PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 2.2e-33
Identity = 92/134 (68.66%), Postives = 111/134 (82.84%), Query Frame = 0


Query: 1   MEVSIVMAMVALLLWTGEAIAQSSDCSNVLISLSPCLSYITGNSSMPSPTCCSQLATVIS 60
           ME S+V+A VA +LW G A AQSS C+NVLISLSPCL+YITGNSS  SPTCC+QLA+V+ 
Sbjct: 6   MEASLVLAAVA-MLWVG-AAAQSS-CTNVLISLSPCLNYITGNSSTASPTCCTQLASVVR 65

Query: 61  SQPQCLCQVLNNGGGASALGGLNVNQTLALALPGACRLQTPPISGCNAASPTNDSPAEAP 120
           SQPQCLCQVL +GGG+S   G+NVNQT ALALPGAC++QTPPIS CNAASP  +SP+E P
Sbjct: 66  SQPQCLCQVL-SGGGSSL--GINVNQTQALALPGACKVQTPPISSCNAASPA-ESPSETP 125

Query: 121 ESPSEEPT-DTTKT 134
           +SP+  P+ D +KT
Sbjct: 126 DSPTTVPSGDGSKT 132

[Close]

BLAST of HG10010234 vs. ExPASy TrEMBL
Match: A0A314UA78 (Non-specific lipid-transfer protein-like protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_33980 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 9.3e-32
Identity = 85/130 (65.38%), Postives = 104/130 (80.00%), Query Frame = 0


Query: 1   MEVSIVMAMVALLLWTGEAIAQSSDCSNVLISLSPCLSYITGNSSMPSPTCCSQLATVIS 60
           ME+S+V+ +V + L   +A AQSS C+NV+IS+SPCL+YITGNSS PS  CCSQLA+V+ 
Sbjct: 5   MEMSLVLVLVTMFL--AKAAAQSS-CTNVIISMSPCLNYITGNSSTPSSGCCSQLASVVR 64

Query: 61  SQPQCLCQVLNNGGGASALGGLNVNQTLALALPGACRLQTPPISGCNAASPTNDSPAEAP 120
           S PQCLC+VL NGGG+S   G+NVNQT ALALPGAC +QTPP+S CNAASP  DSPA  P
Sbjct: 65  SSPQCLCEVL-NGGGSSL--GINVNQTQALALPGACNVQTPPLSQCNAASPA-DSPAGTP 124

Query: 121 ESPSEEPTDT 131
           ESPS+ P+ T
Sbjct: 125 ESPSDGPSGT 127

[Close]

BLAST of HG10010234 vs. TAIR 10
Match: AT3G22600.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 118.6 bits (296), Expect = 4.0e-27
Identity = 67/137 (48.91%), Postives = 89/137 (64.96%), Query Frame = 0


Query: 1   MEVSIVMAMVALLLWTGEAIAQSSDCSNVLISLSPCLSYITGNSSMPSPTCCSQLATVIS 60
           ME+ +V   V + + +   ++  S C+N LIS+SPCL+YITGNS+ P+  CC+QL+ V+ 
Sbjct: 3   MEMGLVFLTVFMAVMSSTMVSAQSSCTNALISMSPCLNYITGNSTSPNQQCCNQLSRVVQ 62

Query: 61  SQPQCLCQVLNNGGGASALGGLNVNQTLALALPGACRLQTPPISGCN----AASPTNDSP 120
           S P CLCQVLN GG      G+NVNQT AL LP AC +QTPP+S CN        T+DSP
Sbjct: 63  SSPDCLCQVLNGGGSQL---GINVNQTQALGLPRACNVQTPPVSRCNTGGGGGGSTSDSP 122

Query: 121 AEAPESPSEEPTDTTKT 134
           AE+P S    P + +KT
Sbjct: 123 AESPNSSG--PGNGSKT 134

[Close]

BLAST of HG10010234 vs. TAIR 10
Match: AT2G48130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 103.6 bits (257), Expect = 1.3e-22
Identity = 66/135 (48.89%), Postives = 85/135 (62.96%), Query Frame = 0


Query: 4   SIVMAMVALL--LWTGEAIAQSSDCSNVLISLSPCLSYITGNSSMPSPTCCSQLATVISS 63
           S  +  VAL+  LW+      SS C + L +LSPCLSYITGNS+ PS  CCS+L +VI S
Sbjct: 6   SYAITFVALVAALWSVTKAQPSSSCVSTLTTLSPCLSYITGNSTTPSQPCCSRLDSVIKS 65

Query: 64  QPQCLCQVLNNGGGASALGGLNVNQTLALALPGACRLQTPPISGCNAAS-PTNDSPAEAP 123
            PQC+C  +N+        GLN+N+T AL LP AC +QTPP++ CNAA+ PT   PA   
Sbjct: 66  SPQCICSAVNS---PIPNIGLNINRTQALQLPNACNIQTPPLTQCNAATGPTAQPPA--- 125

Query: 124 ESPSEEPTDTTKTRT 136
            SP+E+  D T T T
Sbjct: 126 PSPTEKTPDVTLTPT 134

[Close]

BLAST of HG10010234 vs. TAIR 10
Match: AT4G14815.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 99.4 bits (246), Expect = 2.5e-21
Identity = 52/113 (46.02%), Postives = 75/113 (66.37%), Query Frame = 0


Query: 1   MEVSIVMAMVALLLWTGEAIAQSSDCSNVLISLSPCLSYITGNSSMPSPTCCSQLATVIS 60
           M+  + + +   L+     ++  S C+NVLIS++PCLS+IT N+S+PS  CC+QLA V+ 
Sbjct: 1   MKPRMCLILFIALMRVMSIVSAQSSCTNVLISMAPCLSFITQNTSLPSQQCCNQLAHVVR 60

Query: 61  SQPQCLCQVLNNGGGASALGGLNVNQTLALALPGACRLQTPPISGCNAASPTN 114
              +CLCQVL+ GG      G+NVN+T ALALP AC ++TPP S C++ S  N
Sbjct: 61  YSSECLCQVLDGGGSQL---GINVNETQALALPKACHVETPPASRCHSGSSVN 110

[Close]

BLAST of HG10010234 vs. TAIR 10
Match: AT1G03103.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 84.7 bits (208), Expect = 6.4e-17
Identity = 57/135 (42.22%), Postives = 81/135 (60.00%), Query Frame = 0


Query: 5   IVMAMVALLLWT---GEAIAQSSDCSNVLISLSPCLSYITGNSSMPSPTCCSQLATVISS 64
           +++A++AL++ T   G A    + C + L SLSPCL Y+ G SS PS +CC Q +TV+ S
Sbjct: 1   MILAILALVIATFLYGGATTVQAGCRDTLTSLSPCLYYLNGGSSSPSWSCCRQFSTVVQS 60

Query: 65  QPQCLCQVLNNGGGASALGGLNVNQTLALALPGACRLQTPPISGCNAAS--PTN---DSP 124
            P+CLC V+N+    S+  G   N+TLAL LP AC +QTP  S CN     PT    ++P
Sbjct: 61  SPECLCSVVNS--NESSFYGFKFNRTLALNLPTACNVQTPSPSLCNTGGNVPTTLPANTP 120

Query: 125 AEAPESPSEEPTDTT 132
             +P S +  P+ TT
Sbjct: 121 VGSPRS-APSPSGTT 132

[Close]

BLAST of HG10010234 vs. TAIR 10
Match: AT2G13820.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 73.6 bits (179), Expect = 1.5e-13
Identity = 42/119 (35.29%), Postives = 70/119 (58.82%), Query Frame = 0


Query: 4   SIVMAMVALLLWTGEAIAQSSDCSNVLISLSPCLSYITGNSSM--PSPTCCSQLATVISS 63
           +I+M    + L +GE    + DCS+++++++ CLS++T  S++  P  TCCS L TV+ +
Sbjct: 5   TILMIFSVVALMSGERAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRT 64

Query: 64  QPQCLCQVLNNGGGASALGGLNVNQTLALALPGACRLQTPPISGCNAASPTNDSPAEAP 121
            P+CLC+   N G      GL ++ + A +LP  C++  PP + C   S + D PA AP
Sbjct: 65  GPECLCEAFKNSGSL----GLTLDLSKAASLPSVCKVAAPPSARC-GLSVSGDPPATAP 118

The following BLAST results are available for this feature:

BLAST of HG10010234 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447158.1	2.0e-49	77.21	PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis m...	[more]
KAA0048682.1	1.2e-38	83.84	non-specific lipid-transfer protein-like protein [Cucumis melo var. makuwa]	[more]
XP_022138714.1	1.0e-37	78.23	non-specific lipid-transfer protein-like protein At2g13820 [Momordica charantia]	[more]
KCW60709.1	4.6e-33	68.66	hypothetical protein EUGRSUZ_H03442 [Eucalyptus grandis]	[more]
XP_010024255.2	1.0e-32	67.91	non-specific lipid transfer protein GPI-anchored 19 [Eucalyptus grandis]	[more]

BLAST of HG10010234 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LJ86	5.6e-26	48.91	Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=37...	[more]
Q7EB72	1.9e-21	48.89	Non-specific lipid transfer protein GPI-anchored 15 OS=Arabidopsis thaliana OX=3...	[more]
Q2PE59	3.5e-20	46.02	Non-specific lipid transfer protein GPI-anchored 26 OS=Arabidopsis thaliana OX=3...	[more]
F4HZB9	9.0e-16	42.22	Non-specific lipid transfer protein GPI-anchored 19 OS=Arabidopsis thaliana OX=3...	[more]
Q9ZQI8	2.1e-12	35.29	Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of HG10010234 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BG77	9.8e-50	77.21	non-specific lipid-transfer protein-like protein At2g13820 OS=Cucumis melo OX=36...	[more]
A0A5A7TYP5	6.0e-39	83.84	Non-specific lipid-transfer protein-like protein OS=Cucumis melo var. makuwa OX=...	[more]
A0A6J1CAW2	5.1e-38	78.23	non-specific lipid-transfer protein-like protein At2g13820 OS=Momordica charanti...	[more]
A0A059B3V7	2.2e-33	68.66	AAI domain-containing protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_H03442 P...	[more]
A0A314UA78	9.3e-32	65.38	Non-specific lipid-transfer protein-like protein OS=Prunus yedoensis var. nudifl...	[more]

BLAST of HG10010234 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22600.1	4.0e-27	48.91	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G48130.1	1.3e-22	48.89	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G14815.1	2.5e-21	46.02	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G03103.1	6.4e-17	42.22	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G13820.1	1.5e-13	35.29	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 46..60 score: 26.77 coord: 25..41 score: 38.28 coord: 83..100 score: 28.12
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 26..106 e-value: 2.8E-8 score: 43.5
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 7..106 e-value: 1.7E-16 score: 60.1
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 23..104 e-value: 2.0E-18 score: 68.0
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 25..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..141
None	No IPR available	PANTHER	PTHR33044:SF198	NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 2-LIKE ISOFORM X1	coord: 6..122
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 33..98 e-value: 1.81923E-18 score: 72.0742
IPR043325	Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein	PANTHER	PTHR33044	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 6..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10010234.1	HG10010234.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0008289	lipid binding