HG10010203 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10010203
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Auxin-responsive protein
Location	Chr06: 19818406 .. 19819074 (+)
RNA-Seq Expression	HG10010203
Synteny	HG10010203

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATCCAAGGTTGCGTTTCAGAACGATTTGAATCTCGAAGCCACCGAGCTTCGTCTTGGACTACCTGGAATCGCTAATGAAAGAGATGATTCATCAGAGAATTCATCTGGGGTTAAACCTAATAACAAGAGAAATTTACAGAATGACTCTGCTCCACCCCCAAAGTAAGTGGTGATTTCGTTAAAATCTTTTGTGTTTGTAATTTCGTTTTTTGTGTTTTTTGTTACTCAATTTGTGTTTTGTGATGTGGGTTTTGTAGGGCTCAGGTTGTTGGGTGGCCACCGATTAGATCTTTTAGGAAAAATACTCTTCAGGTGAAGAAGACGGAGGCCACAACGGCGGCGGACAGCGCCGGAGGGATTTATGTGAAAGTGAGTATGGATGGCGCTCCTTATTTGAGGAAGATTGATTTGAGTCTCTATAAAGGCTATCCTGAACTTCTTAAGGCCTTGGAAGATATGTTCAAGTTCACTATCGGTAAGAAAAAATTTCAAAATACTTCAATCTTAAATGGGGTTTTTTAATTGATGTTCAAATGTAATAAAGTTTTGTTAAATTACAGGTCAATACTCTGAGAGGGAAGGTTATAAGGGATCTGATTTTGCTCCAACTTATGAAGATAAGGATGGTGATTGGATGCTTGCGGGTGATGTTCCATGGGAGTAA

mRNA sequence

ATGGAATCCAAGGTTGCGTTTCAGAACGATTTGAATCTCGAAGCCACCGAGCTTCGTCTTGGACTACCTGGAATCGCTAATGAAAGAGATGATTCATCAGAGAATTCATCTGGGGTTAAACCTAATAACAAGAGAAATTTACAGAATGACTCTGCTCCACCCCCAAAGGCTCAGGTTGTTGGGTGGCCACCGATTAGATCTTTTAGGAAAAATACTCTTCAGGTGAAGAAGACGGAGGCCACAACGGCGGCGGACAGCGCCGGAGGGATTTATGTGAAAGTGAGTATGGATGGCGCTCCTTATTTGAGGAAGATTGATTTGAGTCTCTATAAAGGCTATCCTGAACTTCTTAAGGCCTTGGAAGATATGTTCAAGTTCACTATCGGTCAATACTCTGAGAGGGAAGGTTATAAGGGATCTGATTTTGCTCCAACTTATGAAGATAAGGATGGTGATTGGATGCTTGCGGGTGATGTTCCATGGGAGTAA

Coding sequence (CDS)

ATGGAATCCAAGGTTGCGTTTCAGAACGATTTGAATCTCGAAGCCACCGAGCTTCGTCTTGGACTACCTGGAATCGCTAATGAAAGAGATGATTCATCAGAGAATTCATCTGGGGTTAAACCTAATAACAAGAGAAATTTACAGAATGACTCTGCTCCACCCCCAAAGGCTCAGGTTGTTGGGTGGCCACCGATTAGATCTTTTAGGAAAAATACTCTTCAGGTGAAGAAGACGGAGGCCACAACGGCGGCGGACAGCGCCGGAGGGATTTATGTGAAAGTGAGTATGGATGGCGCTCCTTATTTGAGGAAGATTGATTTGAGTCTCTATAAAGGCTATCCTGAACTTCTTAAGGCCTTGGAAGATATGTTCAAGTTCACTATCGGTCAATACTCTGAGAGGGAAGGTTATAAGGGATCTGATTTTGCTCCAACTTATGAAGATAAGGATGGTGATTGGATGCTTGCGGGTGATGTTCCATGGGAGTAA

Protein sequence

MESKVAFQNDLNLEATELRLGLPGIANERDDSSENSSGVKPNNKRNLQNDSAPPPKAQVVGWPPIRSFRKNTLQVKKTEATTAADSAGGIYVKVSMDGAPYLRKIDLSLYKGYPELLKALEDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLAGDVPWE

Homology

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BLAST of HG10010203 vs. NCBI nr
Match: XP_004150434.1 (auxin-induced protein 22B [Cucumis sativus] >KGN61645.1 hypothetical protein Csa_006659 [Cucumis sativus])

HSP 1 Score: 300.4 bits (768), Expect = 9.1e-78
Identity = 146/162 (90.12%), Postives = 149/162 (91.98%), Query Frame = 0


Query: 1   MESKVAFQNDLNLEATELRLGLPGIANERDDSSENSSGVKPNNKRNLQNDSAPPPKAQVV 60
           MES V F NDLNLEATELRLGLPGI +ERDDSS  SS VKPNNKRN QNDSAPPPKAQVV
Sbjct: 1   MESNVTFHNDLNLEATELRLGLPGIVSERDDSSATSSAVKPNNKRNFQNDSAPPPKAQVV 60

Query: 61  GWPPIRSFRKNTLQVKKTEATTAADSAGGIYVKVSMDGAPYLRKIDLSLYKGYPELLKAL 120
           GWPPIRSFRKNTLQVKKTEATT A   GGIYVKVSMDGAPYLRKIDLS+YKGYPELLKAL
Sbjct: 61  GWPPIRSFRKNTLQVKKTEATTTAVDGGGIYVKVSMDGAPYLRKIDLSVYKGYPELLKAL 120

Query: 121 EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLAGDVPWE 163
           EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWML GDVPW+
Sbjct: 121 EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWQ 162

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BLAST of HG10010203 vs. NCBI nr
Match: XP_038875234.1 (auxin-induced protein 22B-like [Benincasa hispida])

HSP 1 Score: 299.7 bits (766), Expect = 1.6e-77
Identity = 148/163 (90.80%), Postives = 151/163 (92.64%), Query Frame = 0


Query: 1   MESKVAFQNDLNLEATELRLGLPGIANERDDSSENSSGV-KPNNKRNLQNDSAPPPKAQV 60
           MESKVAFQNDLNLEATELRLGLPGI  ERDD +ENSSGV KPNNKRN   DSAPPPKAQV
Sbjct: 1   MESKVAFQNDLNLEATELRLGLPGIVTERDDPAENSSGVIKPNNKRNFHKDSAPPPKAQV 60

Query: 61  VGWPPIRSFRKNTLQVKKTEATTAADSAGGIYVKVSMDGAPYLRKIDLSLYKGYPELLKA 120
           VGWPPIRSFRKNTLQVKKTEAT AA   GGIYVKVSMDGAPYLRKIDLSLYKGYPELLKA
Sbjct: 61  VGWPPIRSFRKNTLQVKKTEATMAAADGGGIYVKVSMDGAPYLRKIDLSLYKGYPELLKA 120

Query: 121 LEDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLAGDVPWE 163
           LEDMFKFTIGQYSEREGYKGS+FAPTYEDKDGDWML GDVPW+
Sbjct: 121 LEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLVGDVPWQ 163

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BLAST of HG10010203 vs. NCBI nr
Match: XP_008449289.1 (PREDICTED: auxin-induced protein 22B [Cucumis melo] >KAA0057481.1 auxin-induced protein 22B [Cucumis melo var. makuwa] >TYK30177.1 auxin-induced protein 22B [Cucumis melo var. makuwa])

HSP 1 Score: 299.3 bits (765), Expect = 2.0e-77
Identity = 145/162 (89.51%), Postives = 149/162 (91.98%), Query Frame = 0


Query: 1   MESKVAFQNDLNLEATELRLGLPGIANERDDSSENSSGVKPNNKRNLQNDSAPPPKAQVV 60
           MES V F NDLNLEATELRLGLPG+ +ERDDSS  SS VKPNNKRN QNDSAPPPKAQVV
Sbjct: 1   MESNVTFHNDLNLEATELRLGLPGVVSERDDSSAASSAVKPNNKRNFQNDSAPPPKAQVV 60

Query: 61  GWPPIRSFRKNTLQVKKTEATTAADSAGGIYVKVSMDGAPYLRKIDLSLYKGYPELLKAL 120
           GWPPIRSFRKNTLQVKKTEATTAA   GGIYVKVSMDGAPYLRKIDLS+YKGYPE LKAL
Sbjct: 61  GWPPIRSFRKNTLQVKKTEATTAAVDGGGIYVKVSMDGAPYLRKIDLSVYKGYPEFLKAL 120

Query: 121 EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLAGDVPWE 163
           EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWML GDVPW+
Sbjct: 121 EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWQ 162

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BLAST of HG10010203 vs. NCBI nr
Match: XP_023547374.1 (auxin-induced protein 22B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 288.5 bits (737), Expect = 3.6e-74
Identity = 140/162 (86.42%), Postives = 146/162 (90.12%), Query Frame = 0


Query: 1   MESKVAFQNDLNLEATELRLGLPGIANERDDSSENSSGVKPNNKRNLQNDSAPPPKAQVV 60
           MESK AFQ DLNLEATELRLGLPGIA E DDS ENSSG+K NNKRNLQNDSAPPPKAQVV
Sbjct: 1   MESKPAFQTDLNLEATELRLGLPGIATETDDSPENSSGLKTNNKRNLQNDSAPPPKAQVV 60

Query: 61  GWPPIRSFRKNTLQVKKTEATTAADSAGGIYVKVSMDGAPYLRKIDLSLYKGYPELLKAL 120
           GWPP+RSFRKNTLQ+KK    TAAD  GG +VKVSMDGAPYLRKIDL LYKGYPELLKAL
Sbjct: 61  GWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGLYKGYPELLKAL 120

Query: 121 EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLAGDVPWE 163
           EDMFKFTIGQYSEREGYKGSDF+ TYEDKDGDWML GDVPW+
Sbjct: 121 EDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQ 162

[Close]

BLAST of HG10010203 vs. NCBI nr
Match: XP_022959055.1 (auxin-induced protein 22B-like [Cucurbita moschata])

HSP 1 Score: 283.9 bits (725), Expect = 8.8e-73
Identity = 137/162 (84.57%), Postives = 146/162 (90.12%), Query Frame = 0


Query: 1   MESKVAFQNDLNLEATELRLGLPGIANERDDSSENSSGVKPNNKRNLQNDSAPPPKAQVV 60
           MESK AFQ+DLNLEATELRLGLPGIA E DD+ ENS G+K NNKRNLQNDSAPPPKAQVV
Sbjct: 114 MESKPAFQSDLNLEATELRLGLPGIATETDDTLENSPGLKTNNKRNLQNDSAPPPKAQVV 173

Query: 61  GWPPIRSFRKNTLQVKKTEATTAADSAGGIYVKVSMDGAPYLRKIDLSLYKGYPELLKAL 120
           GWPP+RSFRKNTLQ+KK    TAAD  GG +VKVSMDGAPYLRKIDL LY+GYPELLKAL
Sbjct: 174 GWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGLYEGYPELLKAL 233

Query: 121 EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLAGDVPWE 163
           EDMFKFTIGQYSEREGYKGSDF+ TYEDKDGDWML GDVPW+
Sbjct: 234 EDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQ 275

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BLAST of HG10010203 vs. ExPASy Swiss-Prot
Match: P32294 (Auxin-induced protein 22B OS=Vigna radiata var. radiata OX=3916 GN=AUX22B PE=2 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.1e-52
Identity = 106/182 (58.24%), Postives = 130/182 (71.43%), Query Frame = 0


Query: 1   MESKVAFQNDLNLEATELRLGLPGIANERDDSSENSSGVKPNNKR--------------- 60
           MES+V F++DLNL+ATELRLGLPG   E++D++  +  V  NNKR               
Sbjct: 1   MESRVVFESDLNLKATELRLGLPG-TEEKEDNNLRTHAVLRNNKRQVRETSQDSVSISKA 60

Query: 61  -----NLQNDSAPPPKAQVVGWPPIRSFRKNTLQVKKTEATTAADSAGGIYVKVSMDGAP 120
                +++  SAPPPKA++VGWPPIRS+RKN++Q              GI+VKVSMDGAP
Sbjct: 61  SHHQQHVETVSAPPPKAKIVGWPPIRSYRKNSVQ---------EGEGDGIFVKVSMDGAP 120

Query: 121 YLRKIDLSLYKGYPELLKALEDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLAGDVP 163
           YLRK+DL +Y GYPELLKALE MFK  IG+YSEREGYKGS++APTYEDKDGDWML GDVP
Sbjct: 121 YLRKVDLKVYGGYPELLKALETMFKLAIGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVP 172

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BLAST of HG10010203 vs. ExPASy Swiss-Prot
Match: P33077 (Auxin-responsive protein IAA4 OS=Arabidopsis thaliana OX=3702 GN=IAA4 PE=1 SV=2)

HSP 1 Score: 196.8 bits (499), Expect = 1.9e-49
Identity = 96/166 (57.83%), Postives = 121/166 (72.89%), Query Frame = 0


Query: 1   MESKVAFQNDLNLEATELRLGLPGIANERDDSSENSSGVKPNNKRNLQN----DSAPPPK 60
           ME    +   +NL+ATELRLGLPG          N   +    ++ +++    ++A PPK
Sbjct: 1   MEKVDVYDELVNLKATELRLGLPGTEETVSCGKSNKRVLPEATEKEIESTGKTETASPPK 60

Query: 61  AQVVGWPPIRSFRKNTLQVKKTEATTAADSAGGIYVKVSMDGAPYLRKIDLSLYKGYPEL 120
           AQ+VGWPP+RS+RKN +Q KK+E+        G YVKVSMDGAPYLRKIDL++YK YPEL
Sbjct: 61  AQIVGWPPVRSYRKNNVQTKKSES-----EGQGNYVKVSMDGAPYLRKIDLTMYKQYPEL 120

Query: 121 LKALEDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLAGDVPWE 163
           +K+LE+MFKF++G+Y EREGYKGSDF PTYEDKDGDWML GDVPWE
Sbjct: 121 MKSLENMFKFSVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWE 161

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BLAST of HG10010203 vs. ExPASy Swiss-Prot
Match: Q38822 (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana OX=3702 GN=IAA3 PE=1 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.4e-49
Identity = 103/165 (62.42%), Postives = 118/165 (71.52%), Query Frame = 0


Query: 11  LNLEATELRLGLPGIANERDDSSENSSGVKPNNKRNLQND-------------SAPPPKA 70
           +NL+ TELRLGLPG  N   ++ E  S    NNKR L  D             ++PP KA
Sbjct: 5   VNLKETELRLGLPGTDNV-CEAKERVSCCNNNNKRVLSTDTEKEIESSSRKTETSPPRKA 64

Query: 71  QVVGWPPIRSFRKNTLQVKKTEATTAADSAGGIYVKVSMDGAPYLRKIDLSLYKGYPELL 130
           Q+VGWPP+RS+RKN +Q KK E   +     GIYVKVSMDGAPYLRKIDLS YKGY ELL
Sbjct: 65  QIVGWPPVRSYRKNNIQSKKNE---SEHEGQGIYVKVSMDGAPYLRKIDLSCYKGYSELL 124

Query: 131 KALEDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLAGDVPWE 163
           KALE MFKF++G+Y ER+GYKGSDF PTYEDKDGDWML GDVPWE
Sbjct: 125 KALEVMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWE 165

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BLAST of HG10010203 vs. ExPASy Swiss-Prot
Match: P49679 (Auxin-induced protein IAA4 OS=Pisum sativum OX=3888 GN=IAA4/5 PE=1 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.0e-47
Identity = 103/174 (59.20%), Postives = 118/174 (67.82%), Query Frame = 0


Query: 11  LNLEATELRLGLPGIANERDDS-SENSSGVKPNNKRNL---------------------Q 70
           +  +ATELRLGLPGI  E +      SS VK NNKR L                      
Sbjct: 1   MEFKATELRLGLPGITEEEEKKIIHGSSVVKNNNKRQLPQTSEESVSISKVTNDEHIVES 60

Query: 71  NDSAPPPKAQVVGWPPIRSFRKNTLQVKKTEATTAADSAGGIYVKVSMDGAPYLRKIDLS 130
           + +APP KA++VGWPPIRS+RKN+L     EA       GGI+VKVSMDGAPYLRKIDL 
Sbjct: 61  SSAAPPAKAKIVGWPPIRSYRKNSLH----EA-----DVGGIFVKVSMDGAPYLRKIDLR 120

Query: 131 LYKGYPELLKALEDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLAGDVPWE 163
           +Y GY ELLKALE MFK TIG+YSEREGYKGS++APTYEDKDGDWML GDVPW+
Sbjct: 121 VYGGYSELLKALETMFKLTIGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVPWD 165

[Close]

BLAST of HG10010203 vs. ExPASy Swiss-Prot
Match: O24542 (Auxin-induced protein 22D OS=Vigna radiata var. radiata OX=3916 GN=AUX22D PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 5.1e-47
Identity = 97/167 (58.08%), Postives = 119/167 (71.26%), Query Frame = 0


Query: 6   AFQNDLNLEATELRLGLPGIANERDDSSENS---SGVKPNNKRNLQNDS--------APP 65
           +++ +LNL+ATELRLGLPG       ++  S   S  + +++ ++ N S         PP
Sbjct: 7   SYEKELNLKATELRLGLPGSDEPEKRATARSNKRSSPEASDEESISNGSDVTKEDNVVPP 66

Query: 66  PKAQVVGWPPIRSFRKNTLQVKKTEATTAADSAGGIYVKVSMDGAPYLRKIDLSLYKGYP 125
            KAQVVGWPPIRS+RKN +Q KK E +       G+YVKVSM GAPYLRKIDL +YK YP
Sbjct: 67  AKAQVVGWPPIRSYRKNNVQQKKEEES----EGNGMYVKVSMAGAPYLRKIDLKVYKSYP 126

Query: 126 ELLKALEDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLAGDVPW 162
           ELLKALE+MFK   G+YSEREGY GS++APTYEDKDGDWML GDVPW
Sbjct: 127 ELLKALENMFKCIFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPW 169

[Close]

BLAST of HG10010203 vs. ExPASy TrEMBL
Match: A0A0A0LIA8 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G200440 PE=3 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 4.4e-78
Identity = 146/162 (90.12%), Postives = 149/162 (91.98%), Query Frame = 0


Query: 1   MESKVAFQNDLNLEATELRLGLPGIANERDDSSENSSGVKPNNKRNLQNDSAPPPKAQVV 60
           MES V F NDLNLEATELRLGLPGI +ERDDSS  SS VKPNNKRN QNDSAPPPKAQVV
Sbjct: 1   MESNVTFHNDLNLEATELRLGLPGIVSERDDSSATSSAVKPNNKRNFQNDSAPPPKAQVV 60

Query: 61  GWPPIRSFRKNTLQVKKTEATTAADSAGGIYVKVSMDGAPYLRKIDLSLYKGYPELLKAL 120
           GWPPIRSFRKNTLQVKKTEATT A   GGIYVKVSMDGAPYLRKIDLS+YKGYPELLKAL
Sbjct: 61  GWPPIRSFRKNTLQVKKTEATTTAVDGGGIYVKVSMDGAPYLRKIDLSVYKGYPELLKAL 120

Query: 121 EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLAGDVPWE 163
           EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWML GDVPW+
Sbjct: 121 EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWQ 162

[Close]

BLAST of HG10010203 vs. ExPASy TrEMBL
Match: A0A5A7UVE4 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001650 PE=3 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 9.8e-78
Identity = 145/162 (89.51%), Postives = 149/162 (91.98%), Query Frame = 0


Query: 1   MESKVAFQNDLNLEATELRLGLPGIANERDDSSENSSGVKPNNKRNLQNDSAPPPKAQVV 60
           MES V F NDLNLEATELRLGLPG+ +ERDDSS  SS VKPNNKRN QNDSAPPPKAQVV
Sbjct: 1   MESNVTFHNDLNLEATELRLGLPGVVSERDDSSAASSAVKPNNKRNFQNDSAPPPKAQVV 60

Query: 61  GWPPIRSFRKNTLQVKKTEATTAADSAGGIYVKVSMDGAPYLRKIDLSLYKGYPELLKAL 120
           GWPPIRSFRKNTLQVKKTEATTAA   GGIYVKVSMDGAPYLRKIDLS+YKGYPE LKAL
Sbjct: 61  GWPPIRSFRKNTLQVKKTEATTAAVDGGGIYVKVSMDGAPYLRKIDLSVYKGYPEFLKAL 120

Query: 121 EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLAGDVPWE 163
           EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWML GDVPW+
Sbjct: 121 EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWQ 162

[Close]

BLAST of HG10010203 vs. ExPASy TrEMBL
Match: A0A1S3BMB6 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103491213 PE=3 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 9.8e-78
Identity = 145/162 (89.51%), Postives = 149/162 (91.98%), Query Frame = 0


Query: 1   MESKVAFQNDLNLEATELRLGLPGIANERDDSSENSSGVKPNNKRNLQNDSAPPPKAQVV 60
           MES V F NDLNLEATELRLGLPG+ +ERDDSS  SS VKPNNKRN QNDSAPPPKAQVV
Sbjct: 1   MESNVTFHNDLNLEATELRLGLPGVVSERDDSSAASSAVKPNNKRNFQNDSAPPPKAQVV 60

Query: 61  GWPPIRSFRKNTLQVKKTEATTAADSAGGIYVKVSMDGAPYLRKIDLSLYKGYPELLKAL 120
           GWPPIRSFRKNTLQVKKTEATTAA   GGIYVKVSMDGAPYLRKIDLS+YKGYPE LKAL
Sbjct: 61  GWPPIRSFRKNTLQVKKTEATTAAVDGGGIYVKVSMDGAPYLRKIDLSVYKGYPEFLKAL 120

Query: 121 EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLAGDVPWE 163
           EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWML GDVPW+
Sbjct: 121 EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWQ 162

[Close]

BLAST of HG10010203 vs. ExPASy TrEMBL
Match: A0A6J1H578 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111460160 PE=3 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 4.3e-73
Identity = 137/162 (84.57%), Postives = 146/162 (90.12%), Query Frame = 0


Query: 1   MESKVAFQNDLNLEATELRLGLPGIANERDDSSENSSGVKPNNKRNLQNDSAPPPKAQVV 60
           MESK AFQ+DLNLEATELRLGLPGIA E DD+ ENS G+K NNKRNLQNDSAPPPKAQVV
Sbjct: 114 MESKPAFQSDLNLEATELRLGLPGIATETDDTLENSPGLKTNNKRNLQNDSAPPPKAQVV 173

Query: 61  GWPPIRSFRKNTLQVKKTEATTAADSAGGIYVKVSMDGAPYLRKIDLSLYKGYPELLKAL 120
           GWPP+RSFRKNTLQ+KK    TAAD  GG +VKVSMDGAPYLRKIDL LY+GYPELLKAL
Sbjct: 174 GWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGLYEGYPELLKAL 233

Query: 121 EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLAGDVPWE 163
           EDMFKFTIGQYSEREGYKGSDF+ TYEDKDGDWML GDVPW+
Sbjct: 234 EDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQ 275

[Close]

BLAST of HG10010203 vs. ExPASy TrEMBL
Match: A0A6J1L106 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111499384 PE=3 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.8e-71
Identity = 135/162 (83.33%), Postives = 143/162 (88.27%), Query Frame = 0


Query: 1   MESKVAFQNDLNLEATELRLGLPGIANERDDSSENSSGVKPNNKRNLQNDSAPPPKAQVV 60
           MESK AFQ+DLNLEATELRLGLPGIA E DDS ENS G++ NNKR LQNDSAPPPKAQVV
Sbjct: 1   MESKPAFQSDLNLEATELRLGLPGIATETDDSPENSPGLRTNNKRILQNDSAPPPKAQVV 60

Query: 61  GWPPIRSFRKNTLQVKKTEATTAADSAGGIYVKVSMDGAPYLRKIDLSLYKGYPELLKAL 120
           GWPP+RSFRKNTLQ+KK    T AD  GG +VKVSMDGAPYLRKIDL LYKGYPELLKAL
Sbjct: 61  GWPPVRSFRKNTLQMKKPATATVADYGGGFFVKVSMDGAPYLRKIDLGLYKGYPELLKAL 120

Query: 121 EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLAGDVPWE 163
           EDMFKFTIGQYSEREGYKG DF+ TYEDKDGDWML GDVPW+
Sbjct: 121 EDMFKFTIGQYSEREGYKGFDFSLTYEDKDGDWMLVGDVPWQ 162

[Close]

BLAST of HG10010203 vs. TAIR 10
Match: AT5G43700.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 196.8 bits (499), Expect = 1.3e-50
Identity = 96/166 (57.83%), Postives = 121/166 (72.89%), Query Frame = 0


Query: 1   MESKVAFQNDLNLEATELRLGLPGIANERDDSSENSSGVKPNNKRNLQN----DSAPPPK 60
           ME    +   +NL+ATELRLGLPG          N   +    ++ +++    ++A PPK
Sbjct: 1   MEKVDVYDELVNLKATELRLGLPGTEETVSCGKSNKRVLPEATEKEIESTGKTETASPPK 60

Query: 61  AQVVGWPPIRSFRKNTLQVKKTEATTAADSAGGIYVKVSMDGAPYLRKIDLSLYKGYPEL 120
           AQ+VGWPP+RS+RKN +Q KK+E+        G YVKVSMDGAPYLRKIDL++YK YPEL
Sbjct: 61  AQIVGWPPVRSYRKNNVQTKKSES-----EGQGNYVKVSMDGAPYLRKIDLTMYKQYPEL 120

Query: 121 LKALEDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLAGDVPWE 163
           +K+LE+MFKF++G+Y EREGYKGSDF PTYEDKDGDWML GDVPWE
Sbjct: 121 MKSLENMFKFSVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWE 161

[Close]

BLAST of HG10010203 vs. TAIR 10
Match: AT1G04240.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 196.4 bits (498), Expect = 1.7e-50
Identity = 103/165 (62.42%), Postives = 118/165 (71.52%), Query Frame = 0


Query: 11  LNLEATELRLGLPGIANERDDSSENSSGVKPNNKRNLQND-------------SAPPPKA 70
           +NL+ TELRLGLPG  N   ++ E  S    NNKR L  D             ++PP KA
Sbjct: 5   VNLKETELRLGLPGTDNV-CEAKERVSCCNNNNKRVLSTDTEKEIESSSRKTETSPPRKA 64

Query: 71  QVVGWPPIRSFRKNTLQVKKTEATTAADSAGGIYVKVSMDGAPYLRKIDLSLYKGYPELL 130
           Q+VGWPP+RS+RKN +Q KK E   +     GIYVKVSMDGAPYLRKIDLS YKGY ELL
Sbjct: 65  QIVGWPPVRSYRKNNIQSKKNE---SEHEGQGIYVKVSMDGAPYLRKIDLSCYKGYSELL 124

Query: 131 KALEDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLAGDVPWE 163
           KALE MFKF++G+Y ER+GYKGSDF PTYEDKDGDWML GDVPWE
Sbjct: 125 KALEVMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWE 165

[Close]

BLAST of HG10010203 vs. TAIR 10
Match: AT4G14560.1 (indole-3-acetic acid inducible )

HSP 1 Score: 186.0 bits (471), Expect = 2.3e-47
Identity = 98/158 (62.03%), Postives = 114/158 (72.15%), Query Frame = 0


Query: 9   NDLNLEATELRLGLPGIANERDDSSENSSGVKPNNKR---NLQNDSAPPP-KAQVVGWPP 68
           N LNL+ TELRLGLPG    +++     S V+ NNKR   +   +SAPPP K Q+VGWPP
Sbjct: 5   NGLNLKDTELRLGLPG---AQEEQQLELSCVRSNNKRKNNDSTEESAPPPAKTQIVGWPP 64

Query: 69  IRSFRKNTLQVKKTEATTAADSAGGIYVKVSMDGAPYLRKIDLSLYKGYPELLKALEDMF 128
           +RS RKN             ++    YVKVSMDGAPYLRKIDL +YK YPELLKALE+MF
Sbjct: 65  VRSNRKNN------------NNKNVSYVKVSMDGAPYLRKIDLKMYKNYPELLKALENMF 124

Query: 129 KFTIGQYSEREGYKGSDFAPTYEDKDGDWMLAGDVPWE 163
           KFT+G+YSEREGYKGS F PTYEDKDGDWML GDVPW+
Sbjct: 125 KFTVGEYSEREGYKGSGFVPTYEDKDGDWMLVGDVPWD 147

[Close]

BLAST of HG10010203 vs. TAIR 10
Match: AT3G23030.1 (indole-3-acetic acid inducible 2 )

HSP 1 Score: 180.3 bits (456), Expect = 1.3e-45
Identity = 96/159 (60.38%), Postives = 107/159 (67.30%), Query Frame = 0


Query: 9   NDLNLEATELRLGLPGIANERDDSSENSSGVKPNNKRNL-----QNDSAPPPKAQVVGWP 68
           N+LNL+ TEL LGLPG   E+    +  S VK NNKR       + +S PP K Q+VGWP
Sbjct: 7   NELNLKDTELCLGLPG-RTEKIKEEQEVSCVKSNNKRLFEETRDEEESTPPTKTQIVGWP 66

Query: 69  PIRSFRKNTLQVKKTEATTAADSAGGIYVKVSMDGAPYLRKIDLSLYKGYPELLKALEDM 128
           P+RS RKN   V               YVKVSMDGAPYLRKIDL  YK YPELLKALE+M
Sbjct: 67  PVRSSRKNNNSVS--------------YVKVSMDGAPYLRKIDLKTYKNYPELLKALENM 126

Query: 129 FKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLAGDVPWE 163
           FK  IG+Y EREGYKGS F PTYEDKDGDWML GDVPW+
Sbjct: 127 FKVMIGEYCEREGYKGSGFVPTYEDKDGDWMLVGDVPWD 150

[Close]

BLAST of HG10010203 vs. TAIR 10
Match: AT3G04730.1 (indoleacetic acid-induced protein 16 )

HSP 1 Score: 142.1 bits (357), Expect = 3.9e-34
Identity = 93/204 (45.59%), Postives = 110/204 (53.92%), Query Frame = 0


Query: 11  LNLEATELRLGLPGIANERDDSSEN-----------------SSGVKPNNKRNLQNDS-- 70
           +N EATELRLGLPG  +  + + +N                 S+ +   +K +L+N    
Sbjct: 2   INFEATELRLGLPGGNHGGEMAGKNNGKRGFSETVDLKLNLSSTAMDSVSKVDLENMKEK 61

Query: 71  --APPPKAQVVGWPPIRSFRKNTLQVKKT---EATTAADSAGG--------------IYV 130
              PP KAQVVGWPP+RSFRKN +  +K    +AT   D   G               YV
Sbjct: 62  VVKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAYV 121

Query: 131 KVSMDGAPYLRKIDLSLYKGYPELLKALEDMF-KFTIGQYSEREGYK------------- 163
           KVSMDGAPYLRKIDL LYK Y +L  AL  MF  FTIG Y   +G K             
Sbjct: 122 KVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGP-QGMKDFMNESKLIDLLN 181

The following BLAST results are available for this feature:

BLAST of HG10010203 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150434.1	9.1e-78	90.12	auxin-induced protein 22B [Cucumis sativus] >KGN61645.1 hypothetical protein Csa...	[more]
XP_038875234.1	1.6e-77	90.80	auxin-induced protein 22B-like [Benincasa hispida]	[more]
XP_008449289.1	2.0e-77	89.51	PREDICTED: auxin-induced protein 22B [Cucumis melo] >KAA0057481.1 auxin-induced ...	[more]
XP_023547374.1	3.6e-74	86.42	auxin-induced protein 22B-like [Cucurbita pepo subsp. pepo]	[more]
XP_022959055.1	8.8e-73	84.57	auxin-induced protein 22B-like [Cucurbita moschata]	[more]

BLAST of HG10010203 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P32294	1.1e-52	58.24	Auxin-induced protein 22B OS=Vigna radiata var. radiata OX=3916 GN=AUX22B PE=2 S...	[more]
P33077	1.9e-49	57.83	Auxin-responsive protein IAA4 OS=Arabidopsis thaliana OX=3702 GN=IAA4 PE=1 SV=2	[more]
Q38822	2.4e-49	62.42	Auxin-responsive protein IAA3 OS=Arabidopsis thaliana OX=3702 GN=IAA3 PE=1 SV=1	[more]
P49679	3.0e-47	59.20	Auxin-induced protein IAA4 OS=Pisum sativum OX=3888 GN=IAA4/5 PE=1 SV=1	[more]
O24542	5.1e-47	58.08	Auxin-induced protein 22D OS=Vigna radiata var. radiata OX=3916 GN=AUX22D PE=2 S...	[more]

BLAST of HG10010203 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIA8	4.4e-78	90.12	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G200440 PE=3 SV=1	[more]
A0A5A7UVE4	9.8e-78	89.51	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3BMB6	9.8e-78	89.51	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103491213 PE=3 SV=1	[more]
A0A6J1H578	4.3e-73	84.57	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111460160 PE=3 SV=1	[more]
A0A6J1L106	1.8e-71	83.33	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111499384 PE=3 SV=1	[more]

BLAST of HG10010203 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43700.1	1.3e-50	57.83	AUX/IAA transcriptional regulator family protein	[more]
AT1G04240.1	1.7e-50	62.42	AUX/IAA transcriptional regulator family protein	[more]
AT4G14560.1	2.3e-47	62.03	indole-3-acetic acid inducible	[more]
AT3G23030.1	1.3e-45	60.38	indole-3-acetic acid inducible 2	[more]
AT3G04730.1	3.9e-34	45.59	indoleacetic acid-induced protein 16	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 40..162 e-value: 3.8E-44 score: 151.4
None	No IPR available	GENE3D	3.10.20.90		coord: 84..162 e-value: 1.3E-33 score: 117.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..63
None	No IPR available	PANTHER	PTHR31734:SF167	AUXIN-RESPONSIVE PROTEIN	coord: 4..162
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 84..162
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 4..162
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 89..162 score: 23.400169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10010203.1	HG10010203.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding