HG10010172 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10010172
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RING-H2 finger protein ATL16
Location	Chr06: 19285513 .. 19286433 (+)
RNA-Seq Expression	HG10010172
Synteny	HG10010172

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCAAACCCTTATCTCTCCCTCGACCAGTCCGATTCATTCCTCCAACTCCGTTTCAAGTTTTCCAATCATCGCCGTCGCCGTCATCGGAATCTGCGCCACCGCGTTTTTACTTGTCAGCTATTACATCTTCGTCATAAAATGCTGTCTCAACTGGCAACGAATAGAAATCCTCCGTCGGTTTTCTCTCTCCCGACGCCGTGAAGAGACTTTAATACTCCGGCAACCAGCGGAGCCACGTGGGTTAGACCCATCAACGATCCAATCAATCCCATTGATTAATTACAAAAAACCCACTAACGAAACTACCGGCGGCGGTGAATGCGCCGTTTGTCTGACGGAGTTTCAAACGGAGGAGCAATTGAGAAAAATTCCGATTTGTAGCCATCTCTTTCATATTGATTGCATCGACATTTGGCTTCAGAATAACTCCAATTGCCCACTTTGCAGAACCTCAATCTCCGCTCAAAATTGGTTGATTCCAACCGATCAAGCCCCTTCCCCTCGAGATTTGGCCCTCAATACCCGCAGCCCCATTTCCGCCGCCGATGAGAATTTCGTTGTGATTGAACTGGGTCGGAATCTAGATCGCCGCCGTCCTCCGGCGTTGGGGTCCGGCGAGGCGGCGGAATCGGGGAGGAAGTTTAAGAAGGTTACGAGTATGGGCGATGAGTGTATTGACATGAGGGAGAAGGATGAAGAGTTTATAGTGCAGCCGATTAGAAGGTCGTTTTCCATGGATTCATCCGGGGACCGGCAGCTGTATATGGCGGTGCAAGCGGCAGTGCGGCAGAAGGGTGGCGGTGAGAATGGGATTGAGGTTGAGGGTTGCAGTAGCAGAGTACGAAGATCTTTCTTTTCTTTTGGGAGTGGCAGAGGATCTAGAAATGCAGTTTTGCCCATTCAGTTTCAACCTTAA

mRNA sequence

ATGGCCCAAACCCTTATCTCTCCCTCGACCAGTCCGATTCATTCCTCCAACTCCGTTTCAAGTTTTCCAATCATCGCCGTCGCCGTCATCGGAATCTGCGCCACCGCGTTTTTACTTGTCAGCTATTACATCTTCGTCATAAAATGCTGTCTCAACTGGCAACGAATAGAAATCCTCCGTCGGTTTTCTCTCTCCCGACGCCGTGAAGAGACTTTAATACTCCGGCAACCAGCGGAGCCACGTGGGTTAGACCCATCAACGATCCAATCAATCCCATTGATTAATTACAAAAAACCCACTAACGAAACTACCGGCGGCGGTGAATGCGCCGTTTGTCTGACGGAGTTTCAAACGGAGGAGCAATTGAGAAAAATTCCGATTTGTAGCCATCTCTTTCATATTGATTGCATCGACATTTGGCTTCAGAATAACTCCAATTGCCCACTTTGCAGAACCTCAATCTCCGCTCAAAATTGGTTGATTCCAACCGATCAAGCCCCTTCCCCTCGAGATTTGGCCCTCAATACCCGCAGCCCCATTTCCGCCGCCGATGAGAATTTCGTTGTGATTGAACTGGGTCGGAATCTAGATCGCCGCCGTCCTCCGGCGTTGGGGTCCGGCGAGGCGGCGGAATCGGGGAGGAAGTTTAAGAAGGTTACGAGTATGGGCGATGAGTGTATTGACATGAGGGAGAAGGATGAAGAGTTTATAGTGCAGCCGATTAGAAGGTCGTTTTCCATGGATTCATCCGGGGACCGGCAGCTGTATATGGCGGTGCAAGCGGCAGTGCGGCAGAAGGGTGGCGGTGAGAATGGGATTGAGGTTGAGGGTTGCAGTAGCAGAGTACGAAGATCTTTCTTTTCTTTTGGGAGTGGCAGAGGATCTAGAAATGCAGTTTTGCCCATTCAGTTTCAACCTTAA

Coding sequence (CDS)

ATGGCCCAAACCCTTATCTCTCCCTCGACCAGTCCGATTCATTCCTCCAACTCCGTTTCAAGTTTTCCAATCATCGCCGTCGCCGTCATCGGAATCTGCGCCACCGCGTTTTTACTTGTCAGCTATTACATCTTCGTCATAAAATGCTGTCTCAACTGGCAACGAATAGAAATCCTCCGTCGGTTTTCTCTCTCCCGACGCCGTGAAGAGACTTTAATACTCCGGCAACCAGCGGAGCCACGTGGGTTAGACCCATCAACGATCCAATCAATCCCATTGATTAATTACAAAAAACCCACTAACGAAACTACCGGCGGCGGTGAATGCGCCGTTTGTCTGACGGAGTTTCAAACGGAGGAGCAATTGAGAAAAATTCCGATTTGTAGCCATCTCTTTCATATTGATTGCATCGACATTTGGCTTCAGAATAACTCCAATTGCCCACTTTGCAGAACCTCAATCTCCGCTCAAAATTGGTTGATTCCAACCGATCAAGCCCCTTCCCCTCGAGATTTGGCCCTCAATACCCGCAGCCCCATTTCCGCCGCCGATGAGAATTTCGTTGTGATTGAACTGGGTCGGAATCTAGATCGCCGCCGTCCTCCGGCGTTGGGGTCCGGCGAGGCGGCGGAATCGGGGAGGAAGTTTAAGAAGGTTACGAGTATGGGCGATGAGTGTATTGACATGAGGGAGAAGGATGAAGAGTTTATAGTGCAGCCGATTAGAAGGTCGTTTTCCATGGATTCATCCGGGGACCGGCAGCTGTATATGGCGGTGCAAGCGGCAGTGCGGCAGAAGGGTGGCGGTGAGAATGGGATTGAGGTTGAGGGTTGCAGTAGCAGAGTACGAAGATCTTTCTTTTCTTTTGGGAGTGGCAGAGGATCTAGAAATGCAGTTTTGCCCATTCAGTTTCAACCTTAA

Protein sequence

MAQTLISPSTSPIHSSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILRRFSLSRRREETLILRQPAEPRGLDPSTIQSIPLINYKKPTNETTGGGECAVCLTEFQTEEQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAQNWLIPTDQAPSPRDLALNTRSPISAADENFVVIELGRNLDRRRPPALGSGEAAESGRKFKKVTSMGDECIDMREKDEEFIVQPIRRSFSMDSSGDRQLYMAVQAAVRQKGGGENGIEVEGCSSRVRRSFFSFGSGRGSRNAVLPIQFQP

Homology

[Close]

BLAST of HG10010172 vs. NCBI nr
Match: XP_038875603.1 (RING-H2 finger protein ATL16-like [Benincasa hispida])

HSP 1 Score: 575.1 bits (1481), Expect = 3.6e-160
Identity = 289/306 (94.44%), Postives = 296/306 (96.73%), Query Frame = 0


Query: 1   MAQTLISPSTSPIHSSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60
           MAQTLISPSTSP+HSSN VSSFPIIAVAVIGICATAFLLV+YY+FVIKCCLNWQRIEILR
Sbjct: 1   MAQTLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVTYYVFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPAEPRGLDPSTIQSIPLINYKKPTNETTGGGECAVCLTEFQTEE 120
           RFSLSRRREETLILRQPAEPRGLDPSTIQSIPLI+YKKP NETT GGECAVCLTEFQTEE
Sbjct: 61  RFSLSRRREETLILRQPAEPRGLDPSTIQSIPLISYKKPINETTSGGECAVCLTEFQTEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAQNWLIPTDQAPSPRDLALNTRSPI 180
           QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAQNWLIPTDQAPSP+DL LNT S I
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAQNWLIPTDQAPSPQDLGLNTGSHI 180

Query: 181 SAADENFVVIELGRNLDRRRPPALGSGEAAESGRKFKKVTSMGDECIDMREKDEEFIVQP 240
           S ADENFVVIELGRNLDRRR PALGS EAAESGRKFKKVTSMGDECIDMREKDEEFIVQP
Sbjct: 181 SVADENFVVIELGRNLDRRRHPALGSSEAAESGRKFKKVTSMGDECIDMREKDEEFIVQP 240

Query: 241 IRRSFSMDSSGDRQLYMAVQAAVRQKGGGENGIEVEGCSSRVRRSFFSFGSGRGSRNAVL 300
           IRRSFSMDSSGDRQLYMAVQAAVR+KG GENG+EVEGCSSRVRRSFFSFGSGRGSRNAVL
Sbjct: 241 IRRSFSMDSSGDRQLYMAVQAAVREKGDGENGVEVEGCSSRVRRSFFSFGSGRGSRNAVL 300

Query: 301 PIQFQP 307
           PIQFQP
Sbjct: 301 PIQFQP 306

[Close]

BLAST of HG10010172 vs. NCBI nr
Match: XP_008460634.1 (PREDICTED: RING-H2 finger protein ATL16 [Cucumis melo] >KAA0065677.1 RING-H2 finger protein ATL16 [Cucumis melo var. makuwa] >TYK08225.1 RING-H2 finger protein ATL16 [Cucumis melo var. makuwa])

HSP 1 Score: 552.7 bits (1423), Expect = 1.9e-153
Identity = 280/306 (91.50%), Postives = 288/306 (94.12%), Query Frame = 0


Query: 1   MAQTLISPSTSPIHSSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60
           MAQ LISPSTSP+HSSN VSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR
Sbjct: 1   MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPAEPRGLDPSTIQSIPLINYKKPTNETTGGGECAVCLTEFQTEE 120
           RFSLSRRRE+TLILRQ AEPRGLDPS IQSIPLINYKKP  ETT GGECAVCLTEFQTEE
Sbjct: 61  RFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAQNWLIPTDQAPSPRDLALNTRSPI 180
           QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSIS QNWLIPTDQAPS RDLALNT  PI
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIPI 180

Query: 181 SAADENFVVIELGRNLDRRRPPALGSGEAAESGRKFKKVTSMGDECIDMREKDEEFIVQP 240
           SA DENFVVIELG NLDRR+PP L SGE A+S RKFKKVTSMGDECI+MREKDEEFIVQP
Sbjct: 181 SAGDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQP 240

Query: 241 IRRSFSMDSSGDRQLYMAVQAAVRQKGGGENGIEVEGCSSRVRRSFFSFGSGRGSRNAVL 300
           IRRSFSMDSSGDRQLYMAVQAAVR+K GGENG+EVEGCSSRV+RSFFSFGSGRGSRNAVL
Sbjct: 241 IRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSRVKRSFFSFGSGRGSRNAVL 300

Query: 301 PIQFQP 307
           PIQFQP
Sbjct: 301 PIQFQP 306

[Close]

BLAST of HG10010172 vs. NCBI nr
Match: XP_004142260.1 (RING-H2 finger protein ATL16 [Cucumis sativus])

HSP 1 Score: 546.6 bits (1407), Expect = 1.4e-151
Identity = 279/307 (90.88%), Postives = 289/307 (94.14%), Query Frame = 0


Query: 1   MAQTLISPSTSPIHSSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60
           MAQ LISPST+P+HSSN VSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR
Sbjct: 1   MAQPLISPSTTPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPAEPRGLDPSTIQSIPLINYKKPTNE-TTGGGECAVCLTEFQTE 120
           RFSLSRRRE+TLILRQ AEPRGLDPSTIQSIPLINYKKP NE TT GGECAVCLTEFQTE
Sbjct: 61  RFSLSRRREQTLILRQQAEPRGLDPSTIQSIPLINYKKPINETTTTGGECAVCLTEFQTE 120

Query: 121 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAQNWLIPTDQAPSPRDLALNTRSP 180
           EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSIS QNWLIPT+QAPS RDLALNT  P
Sbjct: 121 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTNQAPSARDLALNTSIP 180

Query: 181 ISAADENFVVIELGRNLDRRRPPALGSGEAAESGRKFKKVTSMGDECIDMREKDEEFIVQ 240
           ISA DENFVVIELG NLDR RPP L SGE A+S RKFKKVTSMGDECI+MREKDEEFIVQ
Sbjct: 181 ISAGDENFVVIELGGNLDRCRPPELVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQ 240

Query: 241 PIRRSFSMDSSGDRQLYMAVQAAVRQKGGGENGIEVEGCSSRVRRSFFSFGSGRGSRNAV 300
           PIRRSFSMDSSGDRQLYMAVQAAVR+K GGE+G+EVEGCSSRV+RSFFSFGSGRGSRNAV
Sbjct: 241 PIRRSFSMDSSGDRQLYMAVQAAVREKSGGESGVEVEGCSSRVKRSFFSFGSGRGSRNAV 300

Query: 301 LPIQFQP 307
           LPIQFQP
Sbjct: 301 LPIQFQP 307

[Close]

BLAST of HG10010172 vs. NCBI nr
Match: XP_023006323.1 (RING-H2 finger protein ATL16-like [Cucurbita maxima])

HSP 1 Score: 508.1 bits (1307), Expect = 5.4e-140
Identity = 259/308 (84.09%), Postives = 271/308 (87.99%), Query Frame = 0


Query: 1   MAQTLISPSTSPIHSSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60
           M + LISPS +P+HSS SVSSFPIIAVAVIGICATAFLLV YYIFVIKCCLNWQRIEILR
Sbjct: 1   MEKPLISPSATPLHSSTSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPAEPRGLDPSTIQSIPLINYKKPTNETTGGGECAVCLTEFQTEE 120
           RFSLSRRREETLILRQPA+PRGLDPSTIQSIPLINYKKP  ET  GGECAVCLTEF+ EE
Sbjct: 61  RFSLSRRREETLILRQPADPRGLDPSTIQSIPLINYKKPIKETASGGECAVCLTEFRPEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAQNWLIPTDQAPSPRDLALNTRSPI 180
           QLRKIPICSHLFHIDCIDIWLQNN NCPLCRTSISAQNWLIP DQAPSPRDLALN+ S +
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVDQAPSPRDLALNSGSSV 180

Query: 181 SA--ADENFVVIELGRNLDRRRPPALGSGEAAESGRKFKKVTSMGDECIDMREKDEEFIV 240
            A  ADENFVVIELGRN DRRRPP  G            KVTSMGDECIDMREKD+EF+V
Sbjct: 181 DATTADENFVVIELGRNPDRRRPPPFG------------KVTSMGDECIDMREKDKEFLV 240

Query: 241 QPIRRSFSMDSSGDRQLYMAVQAAVRQKGGGENGIEVEGCSSRVRRSFFSFGSGRGSRNA 300
           QPIRRSFSMDSSGDRQLYMAVQAAVRQ GGGE+ +E EGCS+RVRRSFFSFGSGRGSRN 
Sbjct: 241 QPIRRSFSMDSSGDRQLYMAVQAAVRQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNG 296

Query: 301 VLPIQFQP 307
           VLPIQ QP
Sbjct: 301 VLPIQLQP 296

[Close]

BLAST of HG10010172 vs. NCBI nr
Match: KAG6574922.1 (RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 504.6 bits (1298), Expect = 6.0e-139
Identity = 258/308 (83.77%), Postives = 270/308 (87.66%), Query Frame = 0


Query: 1   MAQTLISPSTSPIHSSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60
           M + LISPS +P HSS +VSSFPIIAVAVIGICATAFLLV YYIFVIKCCLNWQRIEILR
Sbjct: 1   MEKPLISPSATPPHSSTAVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPAEPRGLDPSTIQSIPLINYKKPTNETTGGGECAVCLTEFQTEE 120
           RFSLSRRREETLILRQP EPRGLDPSTIQSIPLINYKKP  ETT GGECAVCLTEFQ EE
Sbjct: 61  RFSLSRRREETLILRQPVEPRGLDPSTIQSIPLINYKKPIKETTSGGECAVCLTEFQPEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAQNWLIPTDQAPSPRDLALNTRSPI 180
           QLRKIPICSHLFHIDCIDIWLQNN NCPLCRTSISAQNWLIP DQAPSPRDL LN+ S +
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPIDQAPSPRDLPLNSCSSV 180

Query: 181 SA--ADENFVVIELGRNLDRRRPPALGSGEAAESGRKFKKVTSMGDECIDMREKDEEFIV 240
           +A  +DENFVVIELGRN DRRRPP  G            KVTSMGDECIDMREKD+EF+V
Sbjct: 181 AATTSDENFVVIELGRNPDRRRPPPFG------------KVTSMGDECIDMREKDKEFLV 240

Query: 241 QPIRRSFSMDSSGDRQLYMAVQAAVRQKGGGENGIEVEGCSSRVRRSFFSFGSGRGSRNA 300
           QPIRRSFSMDSSGDRQLYMAVQAAVRQ GGGE+ +E EGCS+RVRRSFFSFGSGRGSRN 
Sbjct: 241 QPIRRSFSMDSSGDRQLYMAVQAAVRQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNG 296

Query: 301 VLPIQFQP 307
           VLPIQ QP
Sbjct: 301 VLPIQLQP 296

[Close]

BLAST of HG10010172 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 2.8e-70
Identity = 171/361 (47.37%), Postives = 216/361 (59.83%), Query Frame = 0


Query: 8   PSTSPI--HSSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILRRFSLS 67
           P   PI   +S++ +SFPI+AVAVIGI ATAFLLVSYY+FVIKCCLNW RI+IL RFSLS
Sbjct: 18  PPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLS 77

Query: 68  RRR---EETLILRQP-AEPRGLDPSTIQSIPLINYKKPTNET----TGGG---------E 127
           RRR   ++ L++  P    RGLD S I++IP+  +KK  ++     TG G         E
Sbjct: 78  RRRRNDQDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQE 137

Query: 128 CAVCLTEFQTEEQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAQNWLIPTDQAPS 187
           C+VCL+EFQ EE+LR IP CSHLFHIDCID+WLQNN+NCPLCRT +S      P D+  +
Sbjct: 138 CSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDT-SFPPDRVSA 197

Query: 188 PRDLALNTRSPISAADENFVVIELGRNLDRRR---------------------------- 247
           P     N    +   +  +VVIELG ++   R                            
Sbjct: 198 PSTSPENL--VMLRGENEYVVIELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNENTQNS 257

Query: 248 ----PPALGSGEAAESGRKFKKVTSMGDECIDMRE-KDEEF-IVQPIRRSFSMDSSGDRQ 307
               P  L  G      RK  K+TSMGDECID+R  KDE+F  +QPIRRS SMDSS DRQ
Sbjct: 258 ISPSPKKLDRGGLPRKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDSSADRQ 317

[Close]

BLAST of HG10010172 vs. ExPASy Swiss-Prot
Match: P93823 (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 4.1e-66
Identity = 162/355 (45.63%), Postives = 214/355 (60.28%), Query Frame = 0


Query: 10  TSPI--HSSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILRRFSLSRR 69
           TSPI   +S+S ++FPI+A+AVIGI ATAFLLVSYYIFVIKCCLNW +I+I RR   S  
Sbjct: 27  TSPIFPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSD 86

Query: 70  REETLILRQPAEPRGLDPSTIQSIPLINYKK------PTNETTGGGECAVCLTEFQTEEQ 129
           +   +I       RGLD S I++IP+  +KK        +++    EC+VCL EFQ +E+
Sbjct: 87  QNPLMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEK 146

Query: 130 LRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAQ-NWLIPTDQAP-SPRDLALNTRSP 189
           LR IP C H+FHIDCIDIWLQ N+NCPLCRTS+S + ++ +    AP SPR+ + ++R+ 
Sbjct: 147 LRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSSPRENSPHSRNR 206

Query: 190 ------ISAADENFVVIELG----------RNLD----------------------RRRP 249
                 +   D++FVVIELG          RN+D                         P
Sbjct: 207 NLEPGLVLGGDDDFVVIELGASNGNNRESVRNIDFLTEQERVTSNEVSTGNSPKSVSPLP 266

Query: 250 PALGSGEAAESGRKFKKVTSMGDECIDMREKDEEF-IVQPIRRSFSMDSSGDRQLYMAVQ 307
              G+    +  RKF KVTSMGDECID R KD  F  +QPIRRS SMDSS DRQLY+AVQ
Sbjct: 267 IKFGNRGMYKKERKFHKVTSMGDECIDTRGKDGHFGEIQPIRRSISMDSSVDRQLYLAVQ 326

[Close]

BLAST of HG10010172 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.4e-21
Identity = 79/251 (31.47%), Postives = 123/251 (49.00%), Query Frame = 0


Query: 15  SSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILRRFSLSRRREETLIL 74
           SS+S SSF  + +A+IGI  +A +LVSYY  + K C    +       +L+   E     
Sbjct: 47  SSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSS 106

Query: 75  RQPAEPR--GLDPSTIQSIPLINYKKPTNETTGGGECAVCLTEFQTEEQLRKIPICSHLF 134
            Q       GL+ S I+SI +  YK   +    G +C+VCL+EF+  E LR +P C+H F
Sbjct: 107 TQRISTNGDGLNESMIKSITVYKYKS-GDGFVDGSDCSVCLSEFEENESLRLLPKCNHAF 166

Query: 135 HIDCIDIWLQNNSNCPLCRTSISAQNWLIPTDQAPSPRDLALNTRSPISAADENFVVIEL 194
           H+ CID WL+++SNCPLCR  ++  N       A   +++++   +  ++A +   V E+
Sbjct: 167 HLPCIDTWLKSHSNCPLCRAFVTGVN----NPTASVGQNVSVVVANQSNSAHQTGSVSEI 226

Query: 195 GRNLDRRRPPALGSGEAAESGRKFKKVTSMGDECIDMREKDEEFIVQ------------- 250
             NL         +G  +++G  F  V  + D  I  R  D    +Q             
Sbjct: 227 NLNL---------AGYESQTG-DFDSVVVIEDLEIGSRNSDARSELQLPEERRETKDEDS 282

[Close]

BLAST of HG10010172 vs. ExPASy Swiss-Prot
Match: P0C041 (Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 PE=3 SV=2)

HSP 1 Score: 102.8 bits (255), Expect = 6.9e-21
Identity = 63/178 (35.39%), Postives = 92/178 (51.69%), Query Frame = 0


Query: 25  IAVAVIGICATAFLLVSYYIFVIKCCLN---------WQRIEILRRFSLSRRREETLILR 84
           + +A+ GI ATAFLL +YY  V K C N           R +I+   +   R ++     
Sbjct: 61  LVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQDDPFA 120

Query: 85  QPAEPRGLDPSTIQSIPLINYKKPTNE-TTGGGECAVCLTEFQTEEQLRKIPICSHLFHI 144
             +   GLD + I+ I     KK  N     G +C++CL EF  +E LR +P C+H FH+
Sbjct: 121 LESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHV 180

Query: 145 DCIDIWLQNNSNCPLCRTSISAQNWLIPTDQAPSPRDLALNT---RSPISAADENFVV 190
            CID WL+++SNCPLCR  I     ++PT Q P    + +N     S + +A+ N VV
Sbjct: 181 VCIDRWLKSHSNCPLCRAKI-----IVPTTQQPEHHVVVMNLDRFTSNVGSAEGNVVV 233

[Close]

BLAST of HG10010172 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 7.6e-20
Identity = 78/252 (30.95%), Postives = 113/252 (44.84%), Query Frame = 0


Query: 17  NSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQR------IEILRRFSLSRRREE 76
           +S S F  + +A+IGI A+AF+LVSYY  + K C   +          + R S     + 
Sbjct: 51  SSSSDFSPLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQG 110

Query: 77  TLILRQPAEPR-----------GLDPSTIQSIPLINYKKPTNETTGGGECAVCLTEFQTE 136
           T                     GLD S I+SI +  Y+K  +      +C+VCL+EFQ  
Sbjct: 111 TNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRK-MDGFVESSDCSVCLSEFQEN 170

Query: 137 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAQNWLIPTDQAPSPRDLALNTRSP 196
           E LR +P C+H FH+ CID WL+++SNCPLCR  I   + +   D         +   + 
Sbjct: 171 ESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLT---NQQIVTENNS 230

Query: 197 ISAADENFVVIELGRNLDRRRPPALGSGEAAESGRKFKKVTSMGDECIDMREKDEEFIVQ 252
           IS  D++ VV+ L     R R   +  G            T    E  D R+ +E     
Sbjct: 231 ISTGDDSVVVVNLDLENSRSRNETVNEGS-----------TPKPPEMQDSRDGEE----- 280

[Close]

BLAST of HG10010172 vs. ExPASy TrEMBL
Match: A0A5A7VEZ8 (RING-H2 finger protein ATL16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00490 PE=4 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 9.3e-154
Identity = 280/306 (91.50%), Postives = 288/306 (94.12%), Query Frame = 0


Query: 1   MAQTLISPSTSPIHSSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60
           MAQ LISPSTSP+HSSN VSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR
Sbjct: 1   MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPAEPRGLDPSTIQSIPLINYKKPTNETTGGGECAVCLTEFQTEE 120
           RFSLSRRRE+TLILRQ AEPRGLDPS IQSIPLINYKKP  ETT GGECAVCLTEFQTEE
Sbjct: 61  RFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAQNWLIPTDQAPSPRDLALNTRSPI 180
           QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSIS QNWLIPTDQAPS RDLALNT  PI
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIPI 180

Query: 181 SAADENFVVIELGRNLDRRRPPALGSGEAAESGRKFKKVTSMGDECIDMREKDEEFIVQP 240
           SA DENFVVIELG NLDRR+PP L SGE A+S RKFKKVTSMGDECI+MREKDEEFIVQP
Sbjct: 181 SAGDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQP 240

Query: 241 IRRSFSMDSSGDRQLYMAVQAAVRQKGGGENGIEVEGCSSRVRRSFFSFGSGRGSRNAVL 300
           IRRSFSMDSSGDRQLYMAVQAAVR+K GGENG+EVEGCSSRV+RSFFSFGSGRGSRNAVL
Sbjct: 241 IRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSRVKRSFFSFGSGRGSRNAVL 300

Query: 301 PIQFQP 307
           PIQFQP
Sbjct: 301 PIQFQP 306

[Close]

BLAST of HG10010172 vs. ExPASy TrEMBL
Match: A0A1S3CD01 (RING-H2 finger protein ATL16 OS=Cucumis melo OX=3656 GN=LOC103499411 PE=4 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 9.3e-154
Identity = 280/306 (91.50%), Postives = 288/306 (94.12%), Query Frame = 0


Query: 1   MAQTLISPSTSPIHSSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60
           MAQ LISPSTSP+HSSN VSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR
Sbjct: 1   MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPAEPRGLDPSTIQSIPLINYKKPTNETTGGGECAVCLTEFQTEE 120
           RFSLSRRRE+TLILRQ AEPRGLDPS IQSIPLINYKKP  ETT GGECAVCLTEFQTEE
Sbjct: 61  RFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAQNWLIPTDQAPSPRDLALNTRSPI 180
           QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSIS QNWLIPTDQAPS RDLALNT  PI
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIPI 180

Query: 181 SAADENFVVIELGRNLDRRRPPALGSGEAAESGRKFKKVTSMGDECIDMREKDEEFIVQP 240
           SA DENFVVIELG NLDRR+PP L SGE A+S RKFKKVTSMGDECI+MREKDEEFIVQP
Sbjct: 181 SAGDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQP 240

Query: 241 IRRSFSMDSSGDRQLYMAVQAAVRQKGGGENGIEVEGCSSRVRRSFFSFGSGRGSRNAVL 300
           IRRSFSMDSSGDRQLYMAVQAAVR+K GGENG+EVEGCSSRV+RSFFSFGSGRGSRNAVL
Sbjct: 241 IRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSRVKRSFFSFGSGRGSRNAVL 300

Query: 301 PIQFQP 307
           PIQFQP
Sbjct: 301 PIQFQP 306

[Close]

BLAST of HG10010172 vs. ExPASy TrEMBL
Match: A0A0A0LNP5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G178720 PE=4 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 6.7e-152
Identity = 279/307 (90.88%), Postives = 289/307 (94.14%), Query Frame = 0


Query: 1   MAQTLISPSTSPIHSSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60
           MAQ LISPST+P+HSSN VSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR
Sbjct: 1   MAQPLISPSTTPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPAEPRGLDPSTIQSIPLINYKKPTNE-TTGGGECAVCLTEFQTE 120
           RFSLSRRRE+TLILRQ AEPRGLDPSTIQSIPLINYKKP NE TT GGECAVCLTEFQTE
Sbjct: 61  RFSLSRRREQTLILRQQAEPRGLDPSTIQSIPLINYKKPINETTTTGGECAVCLTEFQTE 120

Query: 121 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAQNWLIPTDQAPSPRDLALNTRSP 180
           EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSIS QNWLIPT+QAPS RDLALNT  P
Sbjct: 121 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTNQAPSARDLALNTSIP 180

Query: 181 ISAADENFVVIELGRNLDRRRPPALGSGEAAESGRKFKKVTSMGDECIDMREKDEEFIVQ 240
           ISA DENFVVIELG NLDR RPP L SGE A+S RKFKKVTSMGDECI+MREKDEEFIVQ
Sbjct: 181 ISAGDENFVVIELGGNLDRCRPPELVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQ 240

Query: 241 PIRRSFSMDSSGDRQLYMAVQAAVRQKGGGENGIEVEGCSSRVRRSFFSFGSGRGSRNAV 300
           PIRRSFSMDSSGDRQLYMAVQAAVR+K GGE+G+EVEGCSSRV+RSFFSFGSGRGSRNAV
Sbjct: 241 PIRRSFSMDSSGDRQLYMAVQAAVREKSGGESGVEVEGCSSRVKRSFFSFGSGRGSRNAV 300

Query: 301 LPIQFQP 307
           LPIQFQP
Sbjct: 301 LPIQFQP 307

[Close]

BLAST of HG10010172 vs. ExPASy TrEMBL
Match: A0A6J1L4L0 (RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111499094 PE=4 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 2.6e-140
Identity = 259/308 (84.09%), Postives = 271/308 (87.99%), Query Frame = 0


Query: 1   MAQTLISPSTSPIHSSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60
           M + LISPS +P+HSS SVSSFPIIAVAVIGICATAFLLV YYIFVIKCCLNWQRIEILR
Sbjct: 1   MEKPLISPSATPLHSSTSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPAEPRGLDPSTIQSIPLINYKKPTNETTGGGECAVCLTEFQTEE 120
           RFSLSRRREETLILRQPA+PRGLDPSTIQSIPLINYKKP  ET  GGECAVCLTEF+ EE
Sbjct: 61  RFSLSRRREETLILRQPADPRGLDPSTIQSIPLINYKKPIKETASGGECAVCLTEFRPEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAQNWLIPTDQAPSPRDLALNTRSPI 180
           QLRKIPICSHLFHIDCIDIWLQNN NCPLCRTSISAQNWLIP DQAPSPRDLALN+ S +
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVDQAPSPRDLALNSGSSV 180

Query: 181 SA--ADENFVVIELGRNLDRRRPPALGSGEAAESGRKFKKVTSMGDECIDMREKDEEFIV 240
            A  ADENFVVIELGRN DRRRPP  G            KVTSMGDECIDMREKD+EF+V
Sbjct: 181 DATTADENFVVIELGRNPDRRRPPPFG------------KVTSMGDECIDMREKDKEFLV 240

Query: 241 QPIRRSFSMDSSGDRQLYMAVQAAVRQKGGGENGIEVEGCSSRVRRSFFSFGSGRGSRNA 300
           QPIRRSFSMDSSGDRQLYMAVQAAVRQ GGGE+ +E EGCS+RVRRSFFSFGSGRGSRN 
Sbjct: 241 QPIRRSFSMDSSGDRQLYMAVQAAVRQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNG 296

Query: 301 VLPIQFQP 307
           VLPIQ QP
Sbjct: 301 VLPIQLQP 296

[Close]

BLAST of HG10010172 vs. ExPASy TrEMBL
Match: A0A6J1H640 (RING-H2 finger protein ATL16-like OS=Cucurbita moschata OX=3662 GN=LOC111459948 PE=4 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 1.9e-138
Identity = 256/308 (83.12%), Postives = 270/308 (87.66%), Query Frame = 0


Query: 1   MAQTLISPSTSPIHSSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60
           M + LISPS +P HSS +VSSFPIIAVAVIGICATAFLLV YYIFVIKCCLNWQRIEILR
Sbjct: 1   MEKPLISPSATPPHSSTAVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPAEPRGLDPSTIQSIPLINYKKPTNETTGGGECAVCLTEFQTEE 120
           RFSLSRRREETLILRQP EPRGLDPSTIQSIPLINYKKP  ET+ GGECAVCLTEFQ EE
Sbjct: 61  RFSLSRRREETLILRQPVEPRGLDPSTIQSIPLINYKKPIKETSSGGECAVCLTEFQPEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAQNWLIPTDQAPSPRDLALNTRSPI 180
           QLRKIPICSHLFHIDCIDIWLQNN NCPLCRTSISAQNWLIP DQAPSPRDL LN+ S +
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPIDQAPSPRDLPLNSGSSV 180

Query: 181 SA--ADENFVVIELGRNLDRRRPPALGSGEAAESGRKFKKVTSMGDECIDMREKDEEFIV 240
           +A  +DENFVVIELGRN DRRRPP  G            KVTSMGDECIDMREKD+EF+V
Sbjct: 181 AATTSDENFVVIELGRNPDRRRPPPFG------------KVTSMGDECIDMREKDKEFLV 240

Query: 241 QPIRRSFSMDSSGDRQLYMAVQAAVRQKGGGENGIEVEGCSSRVRRSFFSFGSGRGSRNA 300
           QPIRRSFSMDSSGDRQLYMAVQAAV+Q GGGE+ +E EGCS+RVRRSFFSFGSGRGSRN 
Sbjct: 241 QPIRRSFSMDSSGDRQLYMAVQAAVQQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNG 296

Query: 301 VLPIQFQP 307
           VLPIQ QP
Sbjct: 301 VLPIQLQP 296

[Close]

BLAST of HG10010172 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein )

HSP 1 Score: 266.9 bits (681), Expect = 2.0e-71
Identity = 171/361 (47.37%), Postives = 216/361 (59.83%), Query Frame = 0


Query: 8   PSTSPI--HSSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILRRFSLS 67
           P   PI   +S++ +SFPI+AVAVIGI ATAFLLVSYY+FVIKCCLNW RI+IL RFSLS
Sbjct: 18  PPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLS 77

Query: 68  RRR---EETLILRQP-AEPRGLDPSTIQSIPLINYKKPTNET----TGGG---------E 127
           RRR   ++ L++  P    RGLD S I++IP+  +KK  ++     TG G         E
Sbjct: 78  RRRRNDQDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQE 137

Query: 128 CAVCLTEFQTEEQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAQNWLIPTDQAPS 187
           C+VCL+EFQ EE+LR IP CSHLFHIDCID+WLQNN+NCPLCRT +S      P D+  +
Sbjct: 138 CSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDT-SFPPDRVSA 197

Query: 188 PRDLALNTRSPISAADENFVVIELGRNLDRRR---------------------------- 247
           P     N    +   +  +VVIELG ++   R                            
Sbjct: 198 PSTSPENL--VMLRGENEYVVIELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNENTQNS 257

Query: 248 ----PPALGSGEAAESGRKFKKVTSMGDECIDMRE-KDEEF-IVQPIRRSFSMDSSGDRQ 307
               P  L  G      RK  K+TSMGDECID+R  KDE+F  +QPIRRS SMDSS DRQ
Sbjct: 258 ISPSPKKLDRGGLPRKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDSSADRQ 317

[Close]

BLAST of HG10010172 vs. TAIR 10
Match: AT1G04360.1 (RING/U-box superfamily protein )

HSP 1 Score: 253.1 bits (645), Expect = 2.9e-67
Identity = 162/355 (45.63%), Postives = 214/355 (60.28%), Query Frame = 0


Query: 10  TSPI--HSSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILRRFSLSRR 69
           TSPI   +S+S ++FPI+A+AVIGI ATAFLLVSYYIFVIKCCLNW +I+I RR   S  
Sbjct: 27  TSPIFPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSD 86

Query: 70  REETLILRQPAEPRGLDPSTIQSIPLINYKK------PTNETTGGGECAVCLTEFQTEEQ 129
           +   +I       RGLD S I++IP+  +KK        +++    EC+VCL EFQ +E+
Sbjct: 87  QNPLMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEK 146

Query: 130 LRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAQ-NWLIPTDQAP-SPRDLALNTRSP 189
           LR IP C H+FHIDCIDIWLQ N+NCPLCRTS+S + ++ +    AP SPR+ + ++R+ 
Sbjct: 147 LRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSSPRENSPHSRNR 206

Query: 190 ------ISAADENFVVIELG----------RNLD----------------------RRRP 249
                 +   D++FVVIELG          RN+D                         P
Sbjct: 207 NLEPGLVLGGDDDFVVIELGASNGNNRESVRNIDFLTEQERVTSNEVSTGNSPKSVSPLP 266

Query: 250 PALGSGEAAESGRKFKKVTSMGDECIDMREKDEEF-IVQPIRRSFSMDSSGDRQLYMAVQ 307
              G+    +  RKF KVTSMGDECID R KD  F  +QPIRRS SMDSS DRQLY+AVQ
Sbjct: 267 IKFGNRGMYKKERKFHKVTSMGDECIDTRGKDGHFGEIQPIRRSISMDSSVDRQLYLAVQ 326

[Close]

BLAST of HG10010172 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 105.1 bits (261), Expect = 9.9e-23
Identity = 79/251 (31.47%), Postives = 123/251 (49.00%), Query Frame = 0


Query: 15  SSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILRRFSLSRRREETLIL 74
           SS+S SSF  + +A+IGI  +A +LVSYY  + K C    +       +L+   E     
Sbjct: 47  SSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSS 106

Query: 75  RQPAEPR--GLDPSTIQSIPLINYKKPTNETTGGGECAVCLTEFQTEEQLRKIPICSHLF 134
            Q       GL+ S I+SI +  YK   +    G +C+VCL+EF+  E LR +P C+H F
Sbjct: 107 TQRISTNGDGLNESMIKSITVYKYKS-GDGFVDGSDCSVCLSEFEENESLRLLPKCNHAF 166

Query: 135 HIDCIDIWLQNNSNCPLCRTSISAQNWLIPTDQAPSPRDLALNTRSPISAADENFVVIEL 194
           H+ CID WL+++SNCPLCR  ++  N       A   +++++   +  ++A +   V E+
Sbjct: 167 HLPCIDTWLKSHSNCPLCRAFVTGVN----NPTASVGQNVSVVVANQSNSAHQTGSVSEI 226

Query: 195 GRNLDRRRPPALGSGEAAESGRKFKKVTSMGDECIDMREKDEEFIVQ------------- 250
             NL         +G  +++G  F  V  + D  I  R  D    +Q             
Sbjct: 227 NLNL---------AGYESQTG-DFDSVVVIEDLEIGSRNSDARSELQLPEERRETKDEDS 282

[Close]

BLAST of HG10010172 vs. TAIR 10
Match: AT4G17905.1 (RING/U-box superfamily protein )

HSP 1 Score: 102.8 bits (255), Expect = 4.9e-22
Identity = 63/178 (35.39%), Postives = 92/178 (51.69%), Query Frame = 0


Query: 25  IAVAVIGICATAFLLVSYYIFVIKCCLN---------WQRIEILRRFSLSRRREETLILR 84
           + +A+ GI ATAFLL +YY  V K C N           R +I+   +   R ++     
Sbjct: 61  LVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQDDPFA 120

Query: 85  QPAEPRGLDPSTIQSIPLINYKKPTNE-TTGGGECAVCLTEFQTEEQLRKIPICSHLFHI 144
             +   GLD + I+ I     KK  N     G +C++CL EF  +E LR +P C+H FH+
Sbjct: 121 LESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHV 180

Query: 145 DCIDIWLQNNSNCPLCRTSISAQNWLIPTDQAPSPRDLALNT---RSPISAADENFVV 190
            CID WL+++SNCPLCR  I     ++PT Q P    + +N     S + +A+ N VV
Sbjct: 181 VCIDRWLKSHSNCPLCRAKI-----IVPTTQQPEHHVVVMNLDRFTSNVGSAEGNVVV 233

[Close]

BLAST of HG10010172 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 99.4 bits (246), Expect = 5.4e-21
Identity = 78/252 (30.95%), Postives = 113/252 (44.84%), Query Frame = 0


Query: 17  NSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQR------IEILRRFSLSRRREE 76
           +S S F  + +A+IGI A+AF+LVSYY  + K C   +          + R S     + 
Sbjct: 51  SSSSDFSPLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQG 110

Query: 77  TLILRQPAEPR-----------GLDPSTIQSIPLINYKKPTNETTGGGECAVCLTEFQTE 136
           T                     GLD S I+SI +  Y+K  +      +C+VCL+EFQ  
Sbjct: 111 TNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRK-MDGFVESSDCSVCLSEFQEN 170

Query: 137 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAQNWLIPTDQAPSPRDLALNTRSP 196
           E LR +P C+H FH+ CID WL+++SNCPLCR  I   + +   D         +   + 
Sbjct: 171 ESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLT---NQQIVTENNS 230

Query: 197 ISAADENFVVIELGRNLDRRRPPALGSGEAAESGRKFKKVTSMGDECIDMREKDEEFIVQ 252
           IS  D++ VV+ L     R R   +  G            T    E  D R+ +E     
Sbjct: 231 ISTGDDSVVVVNLDLENSRSRNETVNEGS-----------TPKPPEMQDSRDGEE----- 280

The following BLAST results are available for this feature:

BLAST of HG10010172 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875603.1	3.6e-160	94.44	RING-H2 finger protein ATL16-like [Benincasa hispida]	[more]
XP_008460634.1	1.9e-153	91.50	PREDICTED: RING-H2 finger protein ATL16 [Cucumis melo] >KAA0065677.1 RING-H2 fin...	[more]
XP_004142260.1	1.4e-151	90.88	RING-H2 finger protein ATL16 [Cucumis sativus]	[more]
XP_023006323.1	5.4e-140	84.09	RING-H2 finger protein ATL16-like [Cucurbita maxima]	[more]
KAG6574922.1	6.0e-139	83.77	RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of HG10010172 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSW9	2.8e-70	47.37	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]
P93823	4.1e-66	45.63	RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1	[more]
Q9LF64	1.4e-21	31.47	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
P0C041	6.9e-21	35.39	Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 P...	[more]
Q9SRQ8	7.6e-20	30.95	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]

BLAST of HG10010172 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VEZ8	9.3e-154	91.50	RING-H2 finger protein ATL16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3CD01	9.3e-154	91.50	RING-H2 finger protein ATL16 OS=Cucumis melo OX=3656 GN=LOC103499411 PE=4 SV=1	[more]
A0A0A0LNP5	6.7e-152	90.88	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G178720 P...	[more]
A0A6J1L4L0	2.6e-140	84.09	RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111499094 PE...	[more]
A0A6J1H640	1.9e-138	83.12	RING-H2 finger protein ATL16-like OS=Cucurbita moschata OX=3662 GN=LOC111459948 ...	[more]

BLAST of HG10010172 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43420.1	2.0e-71	47.37	RING/U-box superfamily protein	[more]
AT1G04360.1	2.9e-67	45.63	RING/U-box superfamily protein	[more]
AT5G17600.1	9.9e-23	31.47	RING/U-box superfamily protein	[more]
AT4G17905.1	4.9e-22	35.39	RING/U-box superfamily protein	[more]
AT3G03550.1	5.4e-21	30.95	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 109..150 e-value: 8.8E-6 score: 35.2
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 108..151 e-value: 3.1E-12 score: 46.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 109..151 score: 12.25323
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 71..157 e-value: 1.8E-22 score: 80.8
None	No IPR available	PANTHER	PTHR46913:SF1	RING-H2 FINGER PROTEIN ATL16	coord: 10..305
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 108..151 e-value: 7.30782E-17 score: 71.1789
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 102..157
IPR044600	RING-H2 finger protein ATL1/ATL16	PANTHER	PTHR46913	RING-H2 FINGER PROTEIN ATL16	coord: 10..305

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10010172.1	HG10010172.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016740	transferase activity