HG10010120 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10010120
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Heterogeneous nuclear ribonucleoprotein 1-like
Location	Chr06: 18534225 .. 18537261 (+)
RNA-Seq Expression	HG10010120
Synteny	HG10010120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTCGGATCAGGGGAAGCTTTTTATTGGTGGGATTTCATGGGAGACCTCCGAGGATAAGCTAAAGGACTACTTTAGCAACTATGGTGAAGTTATGCATACGGTCGTTATGAGGGATAAGATCACTAGCAGACCTAGAGGGTTTGGCTTTGTTGTCTTTGCAGATCCCTCTGTTCTCGATCGAGTTCTCCAGGATAAGCACACTATCGATGGTAAAACGGTGCGTCAGAATCGTTTTTCTCTTTTCTTCTTTCGATATGTGGAGTTTTCGCCTTTTTGGTTTTTGATAATTACCATGTGGGTTCCTTTGATTTGGCCTTCTTTATTTTAATTATCATTATGATGACTCTGGTTGGTGGATACAACTCATTTGAGTTGTTGGGGGTTTTTGATTCCACAATGACACTAAATAGTTTTCTTTCGGGTGTCAAATATCTGATGTTTATTGGTTTTTTAGGGTAGATTGTATTGATGCATCTTCACCTTCCTGTTGAACTTTTGGTTCATGTGTTGTCTTTTCTGTGCCTGTTGTTTTTGTTGACATATCTGTTTATTTGGTGCTTTATTTTTTCATGAGGCGAGACGTTGAGAAAAGGGTCGGTTGTATTCTGTAATTTCATTTCAACAGTTTATGTTTTCACTATGATCTACTAGAACAAATCGTATTTCGTATTTTGTGTCTTTCCTCTTGATAGCTAATTGTAAAGTATAGACTTGGAATATTAGAAATGGGTTGCAATGAATCTGTTGACTTCAACTGTTAAGTATGTCTCAGTTTTTCTTTGGTTAATGTTATTTGTTTTTTCGGAGATGAAAGTTTATTAGATCATTATTATTCACAAATCAGACTGTTGCTGAAACTGTTTTCCACTTTTATTATCTTATCTTCTGAAAATATTTTTAACTTTATGTATTCAAATTTTTTTAGTTACTTTTTAGCATTTGTAATTTATATTCTTTTATAGGTTGAGGCCAAGAGGGCCTTATCACGGGAGGAACAGCAGACCCCTGCCAGAGCAAGCAATTCTAATGCTACTAGAAACTCTGGCGGCGGTGGTGGTGGAAACATGAGAACCAAAAAAATTTTTGTTGGGGGATTGCCTCCAACATTGACTGAAGAAGGATTTAAAGAGTACTTTGAGGCTTATGGCCATGTAACTGATGTAGTAGTCATGTATGATCAAAATACTAGACGTCCACGGGGATTTGGATTTATATCTTTTGATACTGAAGAAGCTGTTGACAGAGTTTTGCACAAGACATTTCATGATTTGAATGGTAAACAAGTAGAAGTTAAGCGTGCCCTTCCCAAAGATGCCAATCCAGGTGCAGGTGGCCGTTCAATGGGTGGTGGTGCTGGTAGTGGTGGTTATCAAAGTTATGGGTCATCTGGTGGTGTCAATTCAAATTCTTATGATAATCGTATGGATTCCAATAGGTACATGCAATCTCAGGGCTCTAGTGGAGGTTTCCCACCTTATGGTTCCTCTGGATATAATAATCCTGGGTATGGGTATGGTTCATCAAACAATGGTATGGGATATGGTGGTTATGGAAATTACAGTGGTTCAAATACTGGGTATGGTGCCCCTGCAGCAGTAGCCTATGGTAACCCAAATGTCGCCAATGCTGGTTACGGGAGTGGTCCTCAAGGTGGACCTAGAAGTTCATGGTCAGGTCAAGCTCCCTCTGGGTATGGAGCCATGGGTTATGGGAATGCTGCTCCTTGGGGTGGTGCTCCTGGGGCCAATGCTGGAGCTGGCAGTGGAGGACCTGGATCTGCACCCACAGGTCATTCTCCTGGTGGAGCTGCTGCTGGGTATGGCAATCAGGGTTATGGATATGGTGGGTTTGGGAATCAAGGTTATGGTTATGGTGGAGGTGATGGCTCGTATGGGAGTCAATCTGGTTATGGTACAACCGGAGGACGATCTGGTAGTGCCTCAAATAACAATGTTGGGGGTGGTCCAAGTGGGGGAGAAATACAGGGGAACAATGCTTACATGGGTAATGGCTATGGGGATGCTAATGGAAACACTGGTTATGGAAATGCTGCATGGAGATCTGATGGAGGACAAGTAGGTTATACAGGTGGTTATGCCGGTGGACAAGCTCGACAAGCCCAACAACAGTAATTTGATGATCAAAAGTGAACTGGATTTTGCCAAGTTCTGTGTATCCCTGTTTGTTTTATGAGAATTGAGATCGATGTTTTCCAGTTGCTTATTAAAAAAAGTTTTCTTGTTGCTGACTGAAGCAGTGGCCCAATTTGGAACACAATGAGCCTGGTGGGGTTGCTTGAATCCAAGTAGCTTGCAGTATTAATTTTTCTAGTCTAAAATAAGTAGCTGTTTTAGAAGTTTACTTGATGCTTCAGTTATTTAGTATTTTGTTGCCGAACGTAGTTAAATTTGATCTCTTTATGAATGTCTATTTAGCTGTCTGGAATCAATTTTCATCTTTTCACATTGTTTGAGCTGTAACGATTTGTAGTCCTTTCCCATTATCAGTGGTTTGATAGCTAATACTTATATTCAGATATTTTATGTTTCCTTTTGTTCTCTGTTCATCAGGCGTAGATGGTATGAAGAATTAGGTGATAGATGTTTCATTCTTTAACTTACATTTGAAGTAGGAATACAAAAGGTGTAGTGTAGAGAGAGTTGTAGTGATAGATGATAGTGTTGGAGCCCTCGCTATTGGGTCGATCACTTCGTATGGCTAGACCTAATCGTAGTCGTAGTTGGCTCTTTAACAATGGCATAATCATTTTCCCCCTCTATTTGCCCTTGTGTTACAGGAGGGATGCCCGGAGTTGTAAAAGTGGAGTCAAGAGAGTCCACTCATGGCTGAACACAGGCTTCGTAATGAAGGACCGTGTTGGGGATGTGTGTGTTCAGCATTTATGGAACTCGAGGATCTTTAATCGGTTGAAAAATGGATTTACCCCCGGAACTGAATATGTTCTCCTGCGAGGCCTTGCCAGCACTATCAAGTATTCCAAATCTCTGGCATTGCAAGTCATGAGTTTATAG

mRNA sequence

ATGGACTCGGATCAGGGGAAGCTTTTTATTGGTGGGATTTCATGGGAGACCTCCGAGGATAAGCTAAAGGACTACTTTAGCAACTATGGTGAAGTTATGCATACGGTCGTTATGAGGGATAAGATCACTAGCAGACCTAGAGGGTTTGGCTTTGTTGTCTTTGCAGATCCCTCTGTTCTCGATCGAGTTCTCCAGGATAAGCACACTATCGATGGTAAAACGGTTGAGGCCAAGAGGGCCTTATCACGGGAGGAACAGCAGACCCCTGCCAGAGCAAGCAATTCTAATGCTACTAGAAACTCTGGCGGCGGTGGTGGTGGAAACATGAGAACCAAAAAAATTTTTGTTGGGGGATTGCCTCCAACATTGACTGAAGAAGGATTTAAAGAGTACTTTGAGGCTTATGGCCATGTAACTGATGTAGTAGTCATGTATGATCAAAATACTAGACGTCCACGGGGATTTGGATTTATATCTTTTGATACTGAAGAAGCTGTTGACAGAGTTTTGCACAAGACATTTCATGATTTGAATGGTAAACAAGTAGAAGTTAAGCGTGCCCTTCCCAAAGATGCCAATCCAGGTGCAGGTGGCCGTTCAATGGGTGGTGGTGCTGGTAGTGGTGGTTATCAAAGTTATGGGTCATCTGGTGGTGTCAATTCAAATTCTTATGATAATCGTATGGATTCCAATAGGTACATGCAATCTCAGGGCTCTAGTGGAGGTTTCCCACCTTATGGTTCCTCTGGATATAATAATCCTGGGTATGGGTATGGTTCATCAAACAATGGTATGGGATATGGTGGTTATGGAAATTACAGTGGTTCAAATACTGGGTATGGTGCCCCTGCAGCAGTAGCCTATGGTAACCCAAATGTCGCCAATGCTGGTTACGGGAGTGGTCCTCAAGGTGGACCTAGAAGTTCATGGTCAGGTCAAGCTCCCTCTGGGTATGGAGCCATGGGTTATGGGAATGCTGCTCCTTGGGGTGGTGCTCCTGGGGCCAATGCTGGAGCTGGCAGTGGAGGACCTGGATCTGCACCCACAGGTCATTCTCCTGGTGGAGCTGCTGCTGGGTATGGCAATCAGGGTTATGGATATGGTGGGTTTGGGAATCAAGGTTATGGTTATGGTGGAGGTGATGGCTCGTATGGGAGTCAATCTGGTTATGGTACAACCGGAGGACGATCTGGTAGTGCCTCAAATAACAATGTTGGGGGTGGTCCAAGTGGGGGAGAAATACAGGGGAACAATGCTTACATGGGTAATGGCTATGGGGATGCTAATGGAAACACTGGTTATGGAAATGCTGCATGGAGATCTGATGGAGGACAAGTAGGTTATACAGGTGGTTATGCCGGTGGACAAGCTCGACAAGCCCAACAACAGAGGGATGCCCGGAGTTGTAAAAGTGGAGTCAAGAGAGTCCACTCATGGCTGAACACAGGCTTCGTAATGAAGGACCGTGTTGGGGATGTGTGTGTTCAGCATTTATGGAACTCGAGGATCTTTAATCGGTTGAAAAATGGATTTACCCCCGGAACTGAATATGTTCTCCTGCGAGGCCTTGCCAGCACTATCAAGTATTCCAAATCTCTGGCATTGCAAGTCATGAGTTTATAG

Coding sequence (CDS)

ATGGACTCGGATCAGGGGAAGCTTTTTATTGGTGGGATTTCATGGGAGACCTCCGAGGATAAGCTAAAGGACTACTTTAGCAACTATGGTGAAGTTATGCATACGGTCGTTATGAGGGATAAGATCACTAGCAGACCTAGAGGGTTTGGCTTTGTTGTCTTTGCAGATCCCTCTGTTCTCGATCGAGTTCTCCAGGATAAGCACACTATCGATGGTAAAACGGTTGAGGCCAAGAGGGCCTTATCACGGGAGGAACAGCAGACCCCTGCCAGAGCAAGCAATTCTAATGCTACTAGAAACTCTGGCGGCGGTGGTGGTGGAAACATGAGAACCAAAAAAATTTTTGTTGGGGGATTGCCTCCAACATTGACTGAAGAAGGATTTAAAGAGTACTTTGAGGCTTATGGCCATGTAACTGATGTAGTAGTCATGTATGATCAAAATACTAGACGTCCACGGGGATTTGGATTTATATCTTTTGATACTGAAGAAGCTGTTGACAGAGTTTTGCACAAGACATTTCATGATTTGAATGGTAAACAAGTAGAAGTTAAGCGTGCCCTTCCCAAAGATGCCAATCCAGGTGCAGGTGGCCGTTCAATGGGTGGTGGTGCTGGTAGTGGTGGTTATCAAAGTTATGGGTCATCTGGTGGTGTCAATTCAAATTCTTATGATAATCGTATGGATTCCAATAGGTACATGCAATCTCAGGGCTCTAGTGGAGGTTTCCCACCTTATGGTTCCTCTGGATATAATAATCCTGGGTATGGGTATGGTTCATCAAACAATGGTATGGGATATGGTGGTTATGGAAATTACAGTGGTTCAAATACTGGGTATGGTGCCCCTGCAGCAGTAGCCTATGGTAACCCAAATGTCGCCAATGCTGGTTACGGGAGTGGTCCTCAAGGTGGACCTAGAAGTTCATGGTCAGGTCAAGCTCCCTCTGGGTATGGAGCCATGGGTTATGGGAATGCTGCTCCTTGGGGTGGTGCTCCTGGGGCCAATGCTGGAGCTGGCAGTGGAGGACCTGGATCTGCACCCACAGGTCATTCTCCTGGTGGAGCTGCTGCTGGGTATGGCAATCAGGGTTATGGATATGGTGGGTTTGGGAATCAAGGTTATGGTTATGGTGGAGGTGATGGCTCGTATGGGAGTCAATCTGGTTATGGTACAACCGGAGGACGATCTGGTAGTGCCTCAAATAACAATGTTGGGGGTGGTCCAAGTGGGGGAGAAATACAGGGGAACAATGCTTACATGGGTAATGGCTATGGGGATGCTAATGGAAACACTGGTTATGGAAATGCTGCATGGAGATCTGATGGAGGACAAGTAGGTTATACAGGTGGTTATGCCGGTGGACAAGCTCGACAAGCCCAACAACAGAGGGATGCCCGGAGTTGTAAAAGTGGAGTCAAGAGAGTCCACTCATGGCTGAACACAGGCTTCGTAATGAAGGACCGTGTTGGGGATGTGTGTGTTCAGCATTTATGGAACTCGAGGATCTTTAATCGGTTGAAAAATGGATTTACCCCCGGAACTGAATATGTTCTCCTGCGAGGCCTTGCCAGCACTATCAAGTATTCCAAATCTCTGGCATTGCAAGTCATGAGTTTATAG

Protein sequence

MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFADPSVLDRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVKRALPKDANPGAGGRSMGGGAGSGGYQSYGSSGGVNSNSYDNRMDSNRYMQSQGSSGGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNVANAGYGSGPQGGPRSSWSGQAPSGYGAMGYGNAAPWGGAPGANAGAGSGGPGSAPTGHSPGGAAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNNNVGGGPSGGEIQGNNAYMGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQRDARSCKSGVKRVHSWLNTGFVMKDRVGDVCVQHLWNSRIFNRLKNGFTPGTEYVLLRGLASTIKYSKSLALQVMSL

Homology

[Close]

BLAST of HG10010120 vs. NCBI nr
Match: KAA0050741.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucumis melo var. makuwa] >TYJ95682.1 heterogeneous nuclear ribonucleoprotein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 928.3 bits (2398), Expect = 3.0e-266
Identity = 493/530 (93.02%), Postives = 503/530 (94.91%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFADPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVF+DPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60

Query: 61  DRVLQDKHTID-----------------GKTVEAKRALSREEQQTPARASNSNATRNSGG 120
           DRVLQDKHTID                   +VEAKRALSREEQQTPARASNSN  RNSGG
Sbjct: 61  DRVLQDKHTIDEYRLGILEVCYYESVGFNCSVEAKRALSREEQQTPARASNSNG-RNSGG 120

Query: 121 GGGGNMRTKKIFVGGLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTE 180
            GGGNMRTKKIFVGGLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFD+E
Sbjct: 121 SGGGNMRTKKIFVGGLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDSE 180

Query: 181 EAVDRVLHKTFHDLNGKQVEVKRALPKDANPGAGGRSMGGGAGSGGYQSYGSSGGVNSNS 240
           EAVDRVLHKTFHDLNGKQVEVKRALPKDANPGAGGRSMGGGAGSGGYQ YGSSGGVNSNS
Sbjct: 181 EAVDRVLHKTFHDLNGKQVEVKRALPKDANPGAGGRSMGGGAGSGGYQGYGSSGGVNSNS 240

Query: 241 YDNRMDSNRYMQSQGSSGGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAP 300
           YDNRMDSNRYMQSQGSSGGFPPYGSSGY+NP YGYGSSNNGMGYGGYGNYSGSNTG+GAP
Sbjct: 241 YDNRMDSNRYMQSQGSSGGFPPYGSSGYSNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAP 300

Query: 301 AAVAYGNPNVANAGYGSGPQGGPRSSWSGQAPSGYGAMGYGNAAPWGGAPGANAGAGSGG 360
           AAVAYGNPNVANAGYGSGPQGGPR+SWSGQAPSGYGAMGYGNAAPWGGAPG NAGAGSGG
Sbjct: 301 AAVAYGNPNVANAGYGSGPQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGG 360

Query: 361 PGSAPTGHSPGGAAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNN 420
           PGSAPTGHSPGGAAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGR+GSASN+
Sbjct: 361 PGSAPTGHSPGGAAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRTGSASNS 420

Query: 421 NVGGGPSGGEIQGNNAYMGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 480
           NVGGG SGGE+QGNNAYMGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ
Sbjct: 421 NVGGG-SGGELQGNNAYMGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 480

Query: 481 RDARSCKSGVKRVHSWLNTGFVMKDRVGDVCVQHLWNSRIFNRLKNGFTP 514
           RDARSCKSGVKRVHSWLNTGF+MKDRVGDVCVQHLWNSR FNRLKNGFTP
Sbjct: 481 RDARSCKSGVKRVHSWLNTGFIMKDRVGDVCVQHLWNSRTFNRLKNGFTP 528

[Close]

BLAST of HG10010120 vs. NCBI nr
Match: XP_038874312.1 (heterogeneous nuclear ribonucleoprotein 1-like [Benincasa hispida])

HSP 1 Score: 859.4 bits (2219), Expect = 1.7e-245
Identity = 454/463 (98.06%), Postives = 459/463 (99.14%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFADPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFADPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFADPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLP 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSG GGGGNM+TKKIFVGGLP
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGSGGGGNMKTKKIFVGGLP 120

Query: 121 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 180
           PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK
Sbjct: 121 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 180

Query: 181 QVEVKRALPKDANPGAGGRSMGGGAGSGGYQSYGSSGGVNSNSYDNRMDSNRYMQSQGSS 240
           QVEVKRALPKDANPGAGGRSMGGGAGSGGYQ YGSSGGVNSNSYDNRMDSNRYMQSQGSS
Sbjct: 181 QVEVKRALPKDANPGAGGRSMGGGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGSS 240

Query: 241 GGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNVANAGYGS 300
           GGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNVANAGYGS
Sbjct: 241 GGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNVANAGYGS 300

Query: 301 GPQGGPRSSWSGQAPSGYGAMGYGNAAPWGGAPGANAGAGSGGPGSAPTGHSPGGAAAGY 360
           GPQGGPR+SWSGQA SGYGAMGYGNAAPWGGAPG NAGAGSGGPGSAPTGHSPGGAAAGY
Sbjct: 301 GPQGGPRNSWSGQASSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAAGY 360

Query: 361 GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNNNVGGGPSGGEIQGNNAY 420
           GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASN+NVGGGPSGGE+QGNNA+
Sbjct: 361 GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNSNVGGGPSGGELQGNNAF 420

Query: 421 MGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 464
           MGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ
Sbjct: 421 MGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 463

[Close]

BLAST of HG10010120 vs. NCBI nr
Match: XP_004147161.1 (heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus] >KAE8651801.1 hypothetical protein Csa_006061 [Cucumis sativus])

HSP 1 Score: 847.0 bits (2187), Expect = 8.7e-242
Identity = 449/463 (96.98%), Postives = 455/463 (98.27%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFADPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVF+DPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLP 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSN  RNSGG GGGNMRTKKIFVGGLP
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNG-RNSGGSGGGNMRTKKIFVGGLP 120

Query: 121 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 180
           PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK
Sbjct: 121 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 180

Query: 181 QVEVKRALPKDANPGAGGRSMGGGAGSGGYQSYGSSGGVNSNSYDNRMDSNRYMQSQGSS 240
           QVEVKRALPKDANPGAGGR+M GGAGSGGYQ YGSSGGVNSNSYDNRMDSNRYMQSQGSS
Sbjct: 181 QVEVKRALPKDANPGAGGRTMSGGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGSS 240

Query: 241 GGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNVANAGYGS 300
           GGFPPYGSSGYNNP YGYGSSNNGMGYGGYGNYSGSNTG+GAP AVAYGNPNVANAGYGS
Sbjct: 241 GGFPPYGSSGYNNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAPTAVAYGNPNVANAGYGS 300

Query: 301 GPQGGPRSSWSGQAPSGYGAMGYGNAAPWGGAPGANAGAGSGGPGSAPTGHSPGGAAAGY 360
           GPQGGPR+SWSGQAPSGYGAMGYGNAAPWGGAPG NAGAGSGGPGSAPTGHSPGGAAAGY
Sbjct: 301 GPQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAAGY 360

Query: 361 GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNNNVGGGPSGGEIQGNNAY 420
           GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASN+NVGGGPSGGE+QGNNAY
Sbjct: 361 GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNSNVGGGPSGGELQGNNAY 420

Query: 421 MGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 464
           MGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ
Sbjct: 421 MGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 462

[Close]

BLAST of HG10010120 vs. NCBI nr
Match: XP_008460677.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Cucumis melo])

HSP 1 Score: 839.7 bits (2168), Expect = 1.4e-239
Identity = 448/463 (96.76%), Postives = 456/463 (98.49%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFADPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVF+DPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLP 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSN  RNSGG GGGNMRTKKIFVGGLP
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNG-RNSGGSGGGNMRTKKIFVGGLP 120

Query: 121 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 180
           PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFD+EEAVDRVLHKTFHDLNGK
Sbjct: 121 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDSEEAVDRVLHKTFHDLNGK 180

Query: 181 QVEVKRALPKDANPGAGGRSMGGGAGSGGYQSYGSSGGVNSNSYDNRMDSNRYMQSQGSS 240
           QVEVKRALPKDANPGAGGRSMGGGAGSGGYQ YGSSGGVNSNSYDNRMDSNRYMQSQGSS
Sbjct: 181 QVEVKRALPKDANPGAGGRSMGGGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGSS 240

Query: 241 GGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNVANAGYGS 300
           GGFPPYGSSGY+NP YGYGSSNNGMGYGGYGNYSGSNTG+GAPAAVAYGNPNVANAGYGS
Sbjct: 241 GGFPPYGSSGYSNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAPAAVAYGNPNVANAGYGS 300

Query: 301 GPQGGPRSSWSGQAPSGYGAMGYGNAAPWGGAPGANAGAGSGGPGSAPTGHSPGGAAAGY 360
           GPQGGPR+SWSGQAPSGYGAMGYGNAAPWGGAPG NAGAGSGGPGSAPTGHSPGGAAAGY
Sbjct: 301 GPQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAAGY 360

Query: 361 GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNNNVGGGPSGGEIQGNNAY 420
           GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGR+GSASN+NVGGG SGGE+QGNNAY
Sbjct: 361 GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRTGSASNSNVGGG-SGGELQGNNAY 420

Query: 421 MGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 464
           MGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ
Sbjct: 421 MGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 461

[Close]

BLAST of HG10010120 vs. NCBI nr
Match: XP_022138553.1 (heterogeneous nuclear ribonucleoprotein 1-like [Momordica charantia])

HSP 1 Score: 825.1 bits (2130), Expect = 3.5e-235
Identity = 441/465 (94.84%), Postives = 452/465 (97.20%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFADPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDYF NYG+V+HTVVMRDKITSRPRGFGFVVFADP++L
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFGNYGDVLHTVVMRDKITSRPRGFGFVVFADPAIL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGG-GGGNMRTKKIFVGGL 120
           DRVLQ+KHTIDGKTVEAKRALSREEQQTPARA NSNATRNSGGG GGG+MRTKKIFVGGL
Sbjct: 61  DRVLQEKHTIDGKTVEAKRALSREEQQTPARAGNSNATRNSGGGSGGGSMRTKKIFVGGL 120

Query: 121 PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG 180
           PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG
Sbjct: 121 PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG 180

Query: 181 KQVEVKRALPKDANPGAGGRSMGGGAGSGGYQSYGSSGGVNSNSYDNRMDSNRYMQSQGS 240
           KQVEVKRALPKDANPGAGGRSMGGGAG GGYQSYGSSGG NSNSYDNRMDSNRYMQSQGS
Sbjct: 181 KQVEVKRALPKDANPGAGGRSMGGGAGGGGYQSYGSSGGANSNSYDNRMDSNRYMQSQGS 240

Query: 241 SGGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNVANAGYG 300
           SGGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNVANAGYG
Sbjct: 241 SGGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNVANAGYG 300

Query: 301 SGPQGGPRSSWSGQAPSGYGAMGYGNAAPWGGAPGANAGAGSGGPGSAPTGHSPGGAAAG 360
           SGPQGGPRS+WSGQAPSGYGAMGYGNAAPWGGA G NAGAGSGGPGSAPTGHSPGG AAG
Sbjct: 301 SGPQGGPRSTWSGQAPSGYGAMGYGNAAPWGGAAGNNAGAGSGGPGSAPTGHSPGG-AAG 360

Query: 361 YGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNNNVGGGPSGGEIQGNN- 420
           YGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYG  GGRSGSASN+NVGGGPSGGE+QGN+ 
Sbjct: 361 YGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGAAGGRSGSASNSNVGGGPSGGELQGNSG 420

Query: 421 AYMGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 464
            YMGNGYGDANGN+GYGNAAWRSDGGQVGYTGGYA GQARQAQQQ
Sbjct: 421 GYMGNGYGDANGNSGYGNAAWRSDGGQVGYTGGYAAGQARQAQQQ 464

[Close]

BLAST of HG10010120 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 3.1e-125
Identity = 274/461 (59.44%), Postives = 315/461 (68.33%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFADPSVL 60
           MDSDQGKLF+GGISWET EDKL+++F+NYGEV   +VMRDK+T RPRGFGFV+F+DPSVL
Sbjct: 1   MDSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLP 120
           DRVLQ+KH+ID + V+ KRA+SREEQQ   R  N N +R+SGG      +TKKIFVGGLP
Sbjct: 61  DRVLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYN--KTKKIFVGGLP 120

Query: 121 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 180
           PTLT+E F++YFE YG VTDV +MYDQ T RPRGFGF+SFD+E+AVD VLHKTFHDL+GK
Sbjct: 121 PTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGK 180

Query: 181 QVEVKRALPKDANPGAGGRSMGGGAGSGGYQSYGSSGGVNSNSYDNRMDSNRYMQSQGSS 240
           QVEVKRALPKDANPG GGRSMGGG GSGGYQ YG     N +SYD RMDSNR++Q Q   
Sbjct: 181 QVEVKRALPKDANPGGGGRSMGGG-GSGGYQGYGG----NESSYDGRMDSNRFLQHQSVG 240

Query: 241 GGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNVANAGYGS 300
            G P YGSSGY   G GYG+ +NG GYG YG Y+GS  GYGA A   YG  N+  AGYGS
Sbjct: 241 NGLPSYGSSGY---GAGYGNGSNGAGYGAYGGYTGSAGGYGAGATAGYGATNIPGAGYGS 300

Query: 301 GPQGGPRSSWSGQAPSGYGAMGYGNAAPWGGAPGANAGAGSGGPGSAPTGHSPGGAAAGY 360
                PR+SW   A SGYG  GYG+ A         A +G G PG+AP   SP    +GY
Sbjct: 301 STGVAPRNSWDTPASSGYGNPGYGSGA---------AHSGYGVPGAAPPTQSP----SGY 360

Query: 361 GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNNNVGGGPSGGEIQGNNAY 420
            NQGYGYG       GY G D  YG+Q+ YG  GGR     +NN G G           Y
Sbjct: 361 SNQGYGYG-------GYSGSDSGYGNQAAYGVVGGRPSGGGSNNPGSG----------GY 411

Query: 421 MGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQ 462
           MG GYGD          +WRSD  Q GY GGY  GQ RQ Q
Sbjct: 421 MGGGYGD---------GSWRSDPSQ-GYGGGYNDGQGRQGQ 411

[Close]

BLAST of HG10010120 vs. ExPASy Swiss-Prot
Match: P51991 (Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens OX=9606 GN=HNRNPA3 PE=1 SV=2)

HSP 1 Score: 167.5 bits (423), Expect = 4.0e-40
Identity = 134/371 (36.12%), Postives = 182/371 (49.06%), Query Frame = 0


Query: 7   KLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFADPSVLDRVLQD 66
           KLFIGG+S+ET++D L+++F  +G +   VVMRD  T R RGFGFV ++    +D  +  
Sbjct: 36  KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95

Query: 67  K-HTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLPPTLTE 126
           + H +DG+ VE KRA+SRE+   P                G ++  KKIFVGG+     E
Sbjct: 96  RPHKVDGRVVEPKRAVSREDSVKP----------------GAHLTVKKIFVGGIKEDTEE 155

Query: 127 EGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVK 186
              ++YFE YG +  + VM D+ + + RGF F++FD  + VD+++ + +H +NG   EVK
Sbjct: 156 YNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVK 215

Query: 187 RALPKD----------------------ANPGAGGRSMGGGAGSGGYQSYGSSGGVNSNS 246
           +AL K                        N G GG + G G   GG   YG  GG +  S
Sbjct: 216 KALSKQEMQSAGSQRGRGGGSGNFMGRGGNFGGGGGNFGRGGNFGGRGGYGGGGGGSRGS 275

Query: 247 YDNRMDS-NRYMQSQGSSGGFPPYGS-SGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYG 306
           Y       N +    G+ GG P Y S  GY   G GYG  N G GYGG G Y G N G  
Sbjct: 276 YGGGDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPGYG--NQGGGYGGGGGYDGYNEG-- 335

Query: 307 APAAVAYGNPNVANAGYGSGPQGGPRSSWSGQAPSGYGAM------GYGNAAPWGGAPGA 347
                     N     YG G       ++SGQ  S YG M      G  + +P+GG  G 
Sbjct: 336 ---------GNFGGGNYGGGGNYNDFGNYSGQQQSNYGPMKGGSFGGRSSGSPYGG--GY 375

[Close]

BLAST of HG10010120 vs. ExPASy Swiss-Prot
Match: P51990 (Heterogeneous nuclear ribonucleoprotein A2 homolog 2 OS=Xenopus laevis OX=8355 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.9e-38
Identity = 132/371 (35.58%), Postives = 189/371 (50.94%), Query Frame = 0


Query: 7   KLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFADPSVLDRVLQD 66
           KLFIGG+S+ET+E+ L++++  +G++   VVMRD  + R RGFGFV F+  + +D  +  
Sbjct: 10  KLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMSA 69

Query: 67  K-HTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLPPTLTE 126
           + HTIDG+ VE KRA++REE   P                G ++  KK+FVGG+     E
Sbjct: 70  RPHTIDGRVVEPKRAVAREESAKP----------------GAHVTVKKLFVGGIKEDTEE 129

Query: 127 EGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVK 186
              +EYFE YG +    ++ D+ + + RGFGF++F+  + VD+++ + +H +NG   EV+
Sbjct: 130 HHLREYFEEYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKIVLQKYHTINGHNAEVR 189

Query: 187 RALPK--------------------------DANPGAGGRSMGGGAGSGGYQSYGSS--- 246
           +AL K                          +   G GG   GG  G GG + YG     
Sbjct: 190 KALSKQEMQDVQNTRNNRGGNFGFGDSRGGGNFGSGPGGNFRGGSDGYGGGRGYGDGYNG 249

Query: 247 -GGVNSNSYDNRMDSNRYMQSQGSSGGFPPYGSSGYNNPGYGYGSS--NNGMGY-GGYGN 306
            GG    +Y   +D  + + S G+ GG P YG+ G    GYG G S  N G GY GGY N
Sbjct: 250 YGGGQGGTY---LDEKQNLYSSGNFGGGPSYGAGG-GRGGYGGGPSYGNQGGGYGGGYDN 309

Query: 307 YSGSNTGYGAPAAVAYGNPNVANAGYGSGPQGGPRSSWSGQAPSGYGAMGYGNAAPWGGA 344
           Y G N G G      +GN N  ++ YG    GG   ++ G    G G  G GN  P G  
Sbjct: 310 YGGGNYG-GGGNYNDFGNYNQQSSSYGPMKSGG---NFGGNRSMG-GPYGGGNYGP-GNG 354

[Close]

BLAST of HG10010120 vs. ExPASy Swiss-Prot
Match: P51989 (Heterogeneous nuclear ribonucleoprotein A2 homolog 1 OS=Xenopus laevis OX=8355 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 6.4e-38
Identity = 131/359 (36.49%), Postives = 180/359 (50.14%), Query Frame = 0


Query: 7   KLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFADPSVLDRVLQD 66
           KLFIGG+S+ET+E+ L++Y+  +G +   VVMRD  + R RGFGFV F+  + +D  +  
Sbjct: 10  KLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMAT 69

Query: 67  K-HTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLPPTLTE 126
           + HTIDG+ VE KRA++REE   P                G ++  KK+FVGG+     E
Sbjct: 70  RPHTIDGRVVEPKRAVAREESAKP----------------GAHVTVKKLFVGGIKEDTEE 129

Query: 127 EGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVK 186
              +EYFE YG +  + ++ D+ + + RGF F++FD  + VD+++ + +H +NG   EV+
Sbjct: 130 HHLREYFEEYGKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDKIVLQKYHTINGHNAEVR 189

Query: 187 RALPKDA---------NPGA--------GGRSMGGGAGS---GGYQSYGSSGGVNSNSYD 246
           +AL K           N G         GG + G G G    GG   YG   G   N Y+
Sbjct: 190 KALSKQEMQDVQNTRNNRGGNFGFGDSRGGGNFGSGPGGNFRGGSDGYGGGRGYGDNGYN 249

Query: 247 NRMDSNRYMQSQGSSGGFPPYGSSGYNNPGYGYGSSNNGMGY-GGYGNYSGSNTGYGAPA 306
                    Q  G+ GG P YG       G G G  N G GY GGY NY G N G G   
Sbjct: 250 GYGGG----QGGGNYGGGPSYGGGRGGGYGGGAGYGNQGGGYGGGYDNYGGGNYG-GGGN 309

Query: 307 AVAYGNPNVANAGYGSGPQGGPRSSWSGQAPSGYGAMGYGNAAPWGGAPGANAGAGSGG 344
              +GN N  ++ YG    GG   ++ G    G G  G GN  P G A G N G G GG
Sbjct: 310 YNDFGNYNQQSSNYGPMKSGG---NFGGNRSMGGGPYGGGNYGP-GNASGGN-GGGYGG 342

[Close]

BLAST of HG10010120 vs. ExPASy Swiss-Prot
Match: Q920Q6 (RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 7.1e-37
Identity = 132/356 (37.08%), Postives = 176/356 (49.44%), Query Frame = 0


Query: 4   DQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFADPSVLDRV 63
           D GK+FIGG+SW+TS D L+DYFS +GE+   +VMRD  T R RGFGFV FADP+ +D+V
Sbjct: 19  DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 78

Query: 64  L-QDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLPPT 123
           L Q  H +D KT++ K A        P RA     T           RTKKIFVGGL   
Sbjct: 79  LGQPHHELDSKTIDPKVAF-------PRRAQPKMVT-----------RTKKIFVGGLSAN 138

Query: 124 LTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQV 183
              E  K+YFE +G V D ++M+D+ T R RGFGF++F+ E+ V++V    FH++N K V
Sbjct: 139 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 198

Query: 184 EVKRALPKDA--NPGAGGRSMG---------GGAGSGGYQSYGSSGGVNSNSYDNRMDSN 243
           E K+A PK+    PG  GR+ G          G G  GY ++ ++ G             
Sbjct: 199 ECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATYG------------- 258

Query: 244 RYMQSQGSSGGFPPYGSSGYNNPGYGYG---SSNNGMGYGGYGNYSGSNTGYGAPAAVAY 303
                +G  G  P YG      P   YG   ++      G   N   +   +GAPA+ A 
Sbjct: 259 -----RGYPGFAPSYGYQFPGFPAAAYGPVAAAAVAAARGSVLNSYSAQPNFGAPASPAG 318

Query: 304 GNPNVANAGYGSGPQGGPRSSWSGQAPSGYGAMGYGNAAPWGGAPGANAGAGSGGP 345
            NP     G+      GP +   G A    G   Y +AA     PG+  G G  GP
Sbjct: 319 SNP-ARPGGFPGANSPGPVADLYGPASQDSGVGNYISAA--SPQPGSGFGHGIAGP 335

[Close]

BLAST of HG10010120 vs. ExPASy TrEMBL
Match: A0A5D3B757 (Heterogeneous nuclear ribonucleoprotein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold726G00080 PE=4 SV=1)

HSP 1 Score: 928.3 bits (2398), Expect = 1.4e-266
Identity = 493/530 (93.02%), Postives = 503/530 (94.91%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFADPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVF+DPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60

Query: 61  DRVLQDKHTID-----------------GKTVEAKRALSREEQQTPARASNSNATRNSGG 120
           DRVLQDKHTID                   +VEAKRALSREEQQTPARASNSN  RNSGG
Sbjct: 61  DRVLQDKHTIDEYRLGILEVCYYESVGFNCSVEAKRALSREEQQTPARASNSNG-RNSGG 120

Query: 121 GGGGNMRTKKIFVGGLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTE 180
            GGGNMRTKKIFVGGLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFD+E
Sbjct: 121 SGGGNMRTKKIFVGGLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDSE 180

Query: 181 EAVDRVLHKTFHDLNGKQVEVKRALPKDANPGAGGRSMGGGAGSGGYQSYGSSGGVNSNS 240
           EAVDRVLHKTFHDLNGKQVEVKRALPKDANPGAGGRSMGGGAGSGGYQ YGSSGGVNSNS
Sbjct: 181 EAVDRVLHKTFHDLNGKQVEVKRALPKDANPGAGGRSMGGGAGSGGYQGYGSSGGVNSNS 240

Query: 241 YDNRMDSNRYMQSQGSSGGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAP 300
           YDNRMDSNRYMQSQGSSGGFPPYGSSGY+NP YGYGSSNNGMGYGGYGNYSGSNTG+GAP
Sbjct: 241 YDNRMDSNRYMQSQGSSGGFPPYGSSGYSNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAP 300

Query: 301 AAVAYGNPNVANAGYGSGPQGGPRSSWSGQAPSGYGAMGYGNAAPWGGAPGANAGAGSGG 360
           AAVAYGNPNVANAGYGSGPQGGPR+SWSGQAPSGYGAMGYGNAAPWGGAPG NAGAGSGG
Sbjct: 301 AAVAYGNPNVANAGYGSGPQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGG 360

Query: 361 PGSAPTGHSPGGAAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNN 420
           PGSAPTGHSPGGAAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGR+GSASN+
Sbjct: 361 PGSAPTGHSPGGAAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRTGSASNS 420

Query: 421 NVGGGPSGGEIQGNNAYMGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 480
           NVGGG SGGE+QGNNAYMGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ
Sbjct: 421 NVGGG-SGGELQGNNAYMGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 480

Query: 481 RDARSCKSGVKRVHSWLNTGFVMKDRVGDVCVQHLWNSRIFNRLKNGFTP 514
           RDARSCKSGVKRVHSWLNTGF+MKDRVGDVCVQHLWNSR FNRLKNGFTP
Sbjct: 481 RDARSCKSGVKRVHSWLNTGFIMKDRVGDVCVQHLWNSRTFNRLKNGFTP 528

[Close]

BLAST of HG10010120 vs. ExPASy TrEMBL
Match: A0A0A0LLG6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G171930 PE=4 SV=1)

HSP 1 Score: 847.0 bits (2187), Expect = 4.2e-242
Identity = 449/463 (96.98%), Postives = 455/463 (98.27%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFADPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVF+DPSVL
Sbjct: 107 MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 166

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLP 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSN  RNSGG GGGNMRTKKIFVGGLP
Sbjct: 167 DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNG-RNSGGSGGGNMRTKKIFVGGLP 226

Query: 121 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 180
           PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK
Sbjct: 227 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 286

Query: 181 QVEVKRALPKDANPGAGGRSMGGGAGSGGYQSYGSSGGVNSNSYDNRMDSNRYMQSQGSS 240
           QVEVKRALPKDANPGAGGR+M GGAGSGGYQ YGSSGGVNSNSYDNRMDSNRYMQSQGSS
Sbjct: 287 QVEVKRALPKDANPGAGGRTMSGGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGSS 346

Query: 241 GGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNVANAGYGS 300
           GGFPPYGSSGYNNP YGYGSSNNGMGYGGYGNYSGSNTG+GAP AVAYGNPNVANAGYGS
Sbjct: 347 GGFPPYGSSGYNNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAPTAVAYGNPNVANAGYGS 406

Query: 301 GPQGGPRSSWSGQAPSGYGAMGYGNAAPWGGAPGANAGAGSGGPGSAPTGHSPGGAAAGY 360
           GPQGGPR+SWSGQAPSGYGAMGYGNAAPWGGAPG NAGAGSGGPGSAPTGHSPGGAAAGY
Sbjct: 407 GPQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAAGY 466

Query: 361 GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNNNVGGGPSGGEIQGNNAY 420
           GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASN+NVGGGPSGGE+QGNNAY
Sbjct: 467 GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNSNVGGGPSGGELQGNNAY 526

Query: 421 MGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 464
           MGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ
Sbjct: 527 MGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 568

[Close]

BLAST of HG10010120 vs. ExPASy TrEMBL
Match: A0A1S3CDG3 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucumis melo OX=3656 GN=LOC103499446 PE=4 SV=1)

HSP 1 Score: 839.7 bits (2168), Expect = 6.7e-240
Identity = 448/463 (96.76%), Postives = 456/463 (98.49%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFADPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVF+DPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLP 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSN  RNSGG GGGNMRTKKIFVGGLP
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNG-RNSGGSGGGNMRTKKIFVGGLP 120

Query: 121 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 180
           PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFD+EEAVDRVLHKTFHDLNGK
Sbjct: 121 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDSEEAVDRVLHKTFHDLNGK 180

Query: 181 QVEVKRALPKDANPGAGGRSMGGGAGSGGYQSYGSSGGVNSNSYDNRMDSNRYMQSQGSS 240
           QVEVKRALPKDANPGAGGRSMGGGAGSGGYQ YGSSGGVNSNSYDNRMDSNRYMQSQGSS
Sbjct: 181 QVEVKRALPKDANPGAGGRSMGGGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGSS 240

Query: 241 GGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNVANAGYGS 300
           GGFPPYGSSGY+NP YGYGSSNNGMGYGGYGNYSGSNTG+GAPAAVAYGNPNVANAGYGS
Sbjct: 241 GGFPPYGSSGYSNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAPAAVAYGNPNVANAGYGS 300

Query: 301 GPQGGPRSSWSGQAPSGYGAMGYGNAAPWGGAPGANAGAGSGGPGSAPTGHSPGGAAAGY 360
           GPQGGPR+SWSGQAPSGYGAMGYGNAAPWGGAPG NAGAGSGGPGSAPTGHSPGGAAAGY
Sbjct: 301 GPQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAAGY 360

Query: 361 GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNNNVGGGPSGGEIQGNNAY 420
           GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGR+GSASN+NVGGG SGGE+QGNNAY
Sbjct: 361 GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRTGSASNSNVGGG-SGGELQGNNAY 420

Query: 421 MGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 464
           MGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ
Sbjct: 421 MGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 461

[Close]

BLAST of HG10010120 vs. ExPASy TrEMBL
Match: A0A6J1CDB1 (heterogeneous nuclear ribonucleoprotein 1-like OS=Momordica charantia OX=3673 GN=LOC111009685 PE=4 SV=1)

HSP 1 Score: 825.1 bits (2130), Expect = 1.7e-235
Identity = 441/465 (94.84%), Postives = 452/465 (97.20%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFADPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDYF NYG+V+HTVVMRDKITSRPRGFGFVVFADP++L
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFGNYGDVLHTVVMRDKITSRPRGFGFVVFADPAIL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGG-GGGNMRTKKIFVGGL 120
           DRVLQ+KHTIDGKTVEAKRALSREEQQTPARA NSNATRNSGGG GGG+MRTKKIFVGGL
Sbjct: 61  DRVLQEKHTIDGKTVEAKRALSREEQQTPARAGNSNATRNSGGGSGGGSMRTKKIFVGGL 120

Query: 121 PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG 180
           PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG
Sbjct: 121 PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG 180

Query: 181 KQVEVKRALPKDANPGAGGRSMGGGAGSGGYQSYGSSGGVNSNSYDNRMDSNRYMQSQGS 240
           KQVEVKRALPKDANPGAGGRSMGGGAG GGYQSYGSSGG NSNSYDNRMDSNRYMQSQGS
Sbjct: 181 KQVEVKRALPKDANPGAGGRSMGGGAGGGGYQSYGSSGGANSNSYDNRMDSNRYMQSQGS 240

Query: 241 SGGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNVANAGYG 300
           SGGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNVANAGYG
Sbjct: 241 SGGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNVANAGYG 300

Query: 301 SGPQGGPRSSWSGQAPSGYGAMGYGNAAPWGGAPGANAGAGSGGPGSAPTGHSPGGAAAG 360
           SGPQGGPRS+WSGQAPSGYGAMGYGNAAPWGGA G NAGAGSGGPGSAPTGHSPGG AAG
Sbjct: 301 SGPQGGPRSTWSGQAPSGYGAMGYGNAAPWGGAAGNNAGAGSGGPGSAPTGHSPGG-AAG 360

Query: 361 YGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNNNVGGGPSGGEIQGNN- 420
           YGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYG  GGRSGSASN+NVGGGPSGGE+QGN+ 
Sbjct: 361 YGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGAAGGRSGSASNSNVGGGPSGGELQGNSG 420

Query: 421 AYMGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 464
            YMGNGYGDANGN+GYGNAAWRSDGGQVGYTGGYA GQARQAQQQ
Sbjct: 421 GYMGNGYGDANGNSGYGNAAWRSDGGQVGYTGGYAAGQARQAQQQ 464

[Close]

BLAST of HG10010120 vs. ExPASy TrEMBL
Match: A0A6J1H3Z2 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460283 PE=4 SV=1)

HSP 1 Score: 814.7 bits (2103), Expect = 2.3e-232
Identity = 443/466 (95.06%), Postives = 449/466 (96.35%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFADPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVF+DPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNS-GGGGGGNMRTKKIFVGGL 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNS GGGGGGNMRTKKIFVGGL
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGGNMRTKKIFVGGL 120

Query: 121 PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG 180
           PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG
Sbjct: 121 PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG 180

Query: 181 KQVEVKRALPKDANPGAGGRSMGGGAGSGGYQSYGSSGGVNSNSYDNRMDSNRYMQSQGS 240
           KQVEVKRALPKDANPGAGGRSMGG    GGYQ YGSSGGVNSNSYD+ MDS+RYMQSQGS
Sbjct: 181 KQVEVKRALPKDANPGAGGRSMGG----GGYQGYGSSGGVNSNSYDSHMDSSRYMQSQGS 240

Query: 241 SGGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNVANAGYG 300
            GGFPPYGSSGY+NPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPN ANAGYG
Sbjct: 241 GGGFPPYGSSGYSNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNAANAGYG 300

Query: 301 SGPQGGPRSSWSGQAPSGYGAMGYGNAAPWGGAPGANAGAGSGGPGSAPTGHSPGGAAAG 360
           SGPQGGPRSSWS QAPSGYGAMGYGNAAPWGGAPG NAGAGSGGPGSAPTGHSPGG AAG
Sbjct: 301 SGPQGGPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGG-AAG 360

Query: 361 YGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNNNVGGGPSGGEIQGNN- 420
           YGNQGYGYGG GNQGYGYGGGDGSYGSQSGYGT GGRSGSASN+NVGGGPSGGEIQGN+ 
Sbjct: 361 YGNQGYGYGGLGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGEIQGNSG 420

Query: 421 AYMGNGYGDANG-NTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 464
            YMGNGYGDANG NTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ
Sbjct: 421 GYMGNGYGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 461

[Close]

BLAST of HG10010120 vs. TAIR 10
Match: AT4G14300.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 450.3 bits (1157), Expect = 2.2e-126
Identity = 274/461 (59.44%), Postives = 315/461 (68.33%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFADPSVL 60
           MDSDQGKLF+GGISWET EDKL+++F+NYGEV   +VMRDK+T RPRGFGFV+F+DPSVL
Sbjct: 1   MDSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLP 120
           DRVLQ+KH+ID + V+ KRA+SREEQQ   R  N N +R+SGG      +TKKIFVGGLP
Sbjct: 61  DRVLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYN--KTKKIFVGGLP 120

Query: 121 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 180
           PTLT+E F++YFE YG VTDV +MYDQ T RPRGFGF+SFD+E+AVD VLHKTFHDL+GK
Sbjct: 121 PTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGK 180

Query: 181 QVEVKRALPKDANPGAGGRSMGGGAGSGGYQSYGSSGGVNSNSYDNRMDSNRYMQSQGSS 240
           QVEVKRALPKDANPG GGRSMGGG GSGGYQ YG     N +SYD RMDSNR++Q Q   
Sbjct: 181 QVEVKRALPKDANPGGGGRSMGGG-GSGGYQGYGG----NESSYDGRMDSNRFLQHQSVG 240

Query: 241 GGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNVANAGYGS 300
            G P YGSSGY   G GYG+ +NG GYG YG Y+GS  GYGA A   YG  N+  AGYGS
Sbjct: 241 NGLPSYGSSGY---GAGYGNGSNGAGYGAYGGYTGSAGGYGAGATAGYGATNIPGAGYGS 300

Query: 301 GPQGGPRSSWSGQAPSGYGAMGYGNAAPWGGAPGANAGAGSGGPGSAPTGHSPGGAAAGY 360
                PR+SW   A SGYG  GYG+ A         A +G G PG+AP   SP    +GY
Sbjct: 301 STGVAPRNSWDTPASSGYGNPGYGSGA---------AHSGYGVPGAAPPTQSP----SGY 360

Query: 361 GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNNNVGGGPSGGEIQGNNAY 420
            NQGYGYG       GY G D  YG+Q+ YG  GGR     +NN G G           Y
Sbjct: 361 SNQGYGYG-------GYSGSDSGYGNQAAYGVVGGRPSGGGSNNPGSG----------GY 411

Query: 421 MGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQ 462
           MG GYGD          +WRSD  Q GY GGY  GQ RQ Q
Sbjct: 421 MGGGYGD---------GSWRSDPSQ-GYGGGYNDGQGRQGQ 411

[Close]

BLAST of HG10010120 vs. TAIR 10
Match: AT2G33410.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 439.5 bits (1129), Expect = 3.9e-123
Identity = 271/464 (58.41%), Postives = 319/464 (68.75%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFADPSVL 60
           M+SDQGKLFIGGISW+T E+ L++YFSN+GEV+   VMR+K T RPRGFGFV F+DP+V+
Sbjct: 1   MESDQGKLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVI 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLP 120
           DRVLQDKH ID + V+ KRA+SREEQ    R+   NA+RN     G N+RTKKIFVGGLP
Sbjct: 61  DRVLQDKHHIDNRDVDVKRAMSREEQSPAGRSGTFNASRNF--DSGANVRTKKIFVGGLP 120

Query: 121 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 180
           P LT + F+ YFE YG V+D V+M DQ T+RPRGFGF+SFD+E++VD VLHKTFHDLNGK
Sbjct: 121 PALTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLNGK 180

Query: 181 QVEVKRALPKDANPGAGGRSMGGGAGSGGYQSYGSSGGVNSNSYDNRMDSNRYMQSQGSS 240
           QVEVKRALPKDANPG       G  G+GG+  YG SGG   + Y+ R+DSNRYMQ Q + 
Sbjct: 181 QVEVKRALPKDANPGIASGGGRGSGGAGGFPGYGGSGG---SGYEGRVDSNRYMQPQNTG 240

Query: 241 GGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNVANAGYGS 300
            G+PPYG SGY   GYGYGS  NG+GYGG+G       GYG PA   YGNP+V  AG+GS
Sbjct: 241 SGYPPYGGSGYGT-GYGYGS--NGVGYGGFG-------GYGNPAGAPYGNPSVPGAGFGS 300

Query: 301 GPQGGPRSSWSGQAPSGYGAMGYGNAAPWGGAPGANAGAGSGGPGSAPTGHSPGGAAAGY 360
               GPRSSW  QAPSGYG +GYGNAAPWG         GSGGPGSA  G +  GA+AGY
Sbjct: 301 ----GPRSSWGAQAPSGYGNVGYGNAAPWG---------GSGGPGSAVMGQA--GASAGY 360

Query: 361 GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNNNVGGGPSGGEIQGNNAY 420
                     G+QGYGYGG D SYG+ S YG  GGRSG+  NN+ GG             
Sbjct: 361 ----------GSQGYGYGGNDSSYGTPSAYGAVGGRSGNMPNNHGGG------------- 404

Query: 421 MGNGYGDA-NGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 464
              GY DA +G+ GYGN   + + GQ GY GGY  G  RQAQQQ
Sbjct: 421 ---GYADALDGSGGYGN--HQGNNGQAGYGGGY--GSGRQAQQQ 404

[Close]

BLAST of HG10010120 vs. TAIR 10
Match: AT3G07810.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 213.4 bits (542), Expect = 4.5e-55
Identity = 203/493 (41.18%), Postives = 269/493 (54.56%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFADPSVL 60
           M SD GKLFIGGISW+T+E++LK+YFS++GEV+  V+++D+ T R RGFGFVVFADP+V 
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLP 120
           + V+ +KH IDG+ VEAK+A+ R++Q    R SNS++ + S GG G   RT+KIFVGGLP
Sbjct: 61  EIVITEKHNIDGRLVEAKKAVPRDDQNMVNR-SNSSSIQGSPGGPG---RTRKIFVGGLP 120

Query: 121 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 180
            ++TE  FK YFE +G  TDVVVMYD NT+RPRGFGFI++D+EEAV++VL KTFH+LNGK
Sbjct: 121 SSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGK 180

Query: 181 QVEVKRALPKDANPGAGGRSMGGGAGSG---------GYQSYGSSGGVNSNSYDNRMDSN 240
            VEVKRA+PK+ +PG     +G G   G         GY    +   V    Y  RMD  
Sbjct: 181 MVEVKRAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAV--GGYGLRMD-- 240

Query: 241 RYMQSQGSSGGFPPYGS--SGYNNPGYGYGSSNN-----GMGYGGYGNYSGSNTGYGAPA 300
                    G F P G+  SG+ N   GYG + N       G+ G  NY+G N  YG   
Sbjct: 241 ---------GRFSPVGAGRSGFANYSSGYGMNVNFDQGLPTGFTGGTNYNG-NVDYGRGM 300

Query: 301 AVAY-GNPNVAN--AGYGSGPQGGPRSSWSGQAPS---GYGAMGYGNAAPWGGAPGANAG 360
           +  Y GN N      GY  G  GG  S +S    +     G + Y N      +     G
Sbjct: 301 SPYYIGNTNRFGPAVGYEGGNGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNSNTYMGG 360

Query: 361 AGSGGPG-SAPTGHS------PGGAAAGYGNQG--YGYGGFGNQGYGYGGGD---GSYGS 420
           + SG    S P G+S      PGG      N+   +GYGG G  G+G G G     + G+
Sbjct: 361 SSSGNNTLSGPFGNSGVNWGAPGGGNNAVSNENVKFGYGGNGESGFGLGTGGYAARNPGA 420

Query: 421 QSGYGTTGGRSGSASNNNVGGGPSGGEIQGNNAYMGNGYGDANGNTGYGNAAWRS----D 456
                ++   S SA+NN      +G +  G   + GNG         Y +  WRS     
Sbjct: 421 NKAAPSSSFSSASATNN------TGYDTAGLAEFYGNG-------AVYSDPTWRSPTPET 462

[Close]

BLAST of HG10010120 vs. TAIR 10
Match: AT3G07810.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 213.4 bits (542), Expect = 4.5e-55
Identity = 203/493 (41.18%), Postives = 269/493 (54.56%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFADPSVL 60
           M SD GKLFIGGISW+T+E++LK+YFS++GEV+  V+++D+ T R RGFGFVVFADP+V 
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLP 120
           + V+ +KH IDG+ VEAK+A+ R++Q    R SNS++ + S GG G   RT+KIFVGGLP
Sbjct: 61  EIVITEKHNIDGRLVEAKKAVPRDDQNMVNR-SNSSSIQGSPGGPG---RTRKIFVGGLP 120

Query: 121 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 180
            ++TE  FK YFE +G  TDVVVMYD NT+RPRGFGFI++D+EEAV++VL KTFH+LNGK
Sbjct: 121 SSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGK 180

Query: 181 QVEVKRALPKDANPGAGGRSMGGGAGSG---------GYQSYGSSGGVNSNSYDNRMDSN 240
            VEVKRA+PK+ +PG     +G G   G         GY    +   V    Y  RMD  
Sbjct: 181 MVEVKRAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAV--GGYGLRMD-- 240

Query: 241 RYMQSQGSSGGFPPYGS--SGYNNPGYGYGSSNN-----GMGYGGYGNYSGSNTGYGAPA 300
                    G F P G+  SG+ N   GYG + N       G+ G  NY+G N  YG   
Sbjct: 241 ---------GRFSPVGAGRSGFANYSSGYGMNVNFDQGLPTGFTGGTNYNG-NVDYGRGM 300

Query: 301 AVAY-GNPNVAN--AGYGSGPQGGPRSSWSGQAPS---GYGAMGYGNAAPWGGAPGANAG 360
           +  Y GN N      GY  G  GG  S +S    +     G + Y N      +     G
Sbjct: 301 SPYYIGNTNRFGPAVGYEGGNGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNSNTYMGG 360

Query: 361 AGSGGPG-SAPTGHS------PGGAAAGYGNQG--YGYGGFGNQGYGYGGGD---GSYGS 420
           + SG    S P G+S      PGG      N+   +GYGG G  G+G G G     + G+
Sbjct: 361 SSSGNNTLSGPFGNSGVNWGAPGGGNNAVSNENVKFGYGGNGESGFGLGTGGYAARNPGA 420

Query: 421 QSGYGTTGGRSGSASNNNVGGGPSGGEIQGNNAYMGNGYGDANGNTGYGNAAWRS----D 456
                ++   S SA+NN      +G +  G   + GNG         Y +  WRS     
Sbjct: 421 NKAAPSSSFSSASATNN------TGYDTAGLAEFYGNG-------AVYSDPTWRSPTPET 462

[Close]

BLAST of HG10010120 vs. TAIR 10
Match: AT4G26650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 205.3 bits (521), Expect = 1.2e-52
Identity = 194/469 (41.36%), Postives = 252/469 (53.73%), Query Frame = 0


Query: 3   SDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFADPSVLDR 62
           SD GKLFIGGISW+T E++L++YF  YG+++  V+MRD+ T R RGFGF+VFADPSV +R
Sbjct: 12  SDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAER 71

Query: 63  VLQDKHTIDGKTVEAKRALSREEQQTPAR-ASNSNATRNSGGGGGGNMRTKKIFVGGLPP 122
           V+ DKH IDG+TVEAK+A+ R++QQ   R AS  +    S GG GG  RTKKIFVGGLP 
Sbjct: 72  VIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPS 131

Query: 123 TLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQ 182
           ++TE  FK YF+ +G + DVVVMYD NT+RPRGFGFI+FD+EE+VD VLHKTFH+LNGK 
Sbjct: 132 SITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKM 191

Query: 183 VEVKRALPKDANPGAGGRSMGGGAGSGGYQSYGSSGGV-----NSNSYDNRMDSNRYMQS 242
           VEVKRA+PK+ +     RS   G        YG++ GV     ++NSY N         +
Sbjct: 192 VEVKRAVPKELSSTTPNRSPLIG--------YGNNYGVVPNRSSANSYFNSFPPGYNNNN 251

Query: 243 QGSSGGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGN---PNV 302
            GS+G F P GS       +G G +          N+ G+  GY       Y N   PN 
Sbjct: 252 LGSAGRFSPIGSGRNAFSSFGLGLNQE---LNLNSNFDGNTLGYSRIPGNQYFNSASPNR 311

Query: 303 ANA--GYGSGPQGGPRSSWSGQAPSGYGAMGYGNAAPWGGAPGANAGAGSGGPGSAPTGH 362
            N+  GY  G         S   PS      +GN +   G PG N G   G         
Sbjct: 312 YNSPIGYNRGD--------SAYNPSNRDL--WGNRSDSSG-PGWNLGVSVGN-----NRG 371

Query: 363 SPGGAAAGYGNQGYG--YG-GFGNQGYGYGGGDGSYGSQSG--YGTTGGRSGSASNNNVG 422
           + G ++    N GYG  YG G G  G  + G    +    G  Y  +   S S    ++ 
Sbjct: 372 NWGLSSVVSDNNGYGRSYGAGSGLSGLSFAGNTNGFDGSIGELYRGSSVYSDSTWQQSMP 431

Query: 423 GGPSGGEIQGNNAYMGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGG 456
              S  E+ G    +   YG    N G   +A  S+    GY+G Y  G
Sbjct: 432 HHQSSNELDG----LSRSYGFGIDNVGSDPSANASE----GYSGNYNVG 445

The following BLAST results are available for this feature:

BLAST of HG10010120 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050741.1	3.0e-266	93.02	heterogeneous nuclear ribonucleoprotein 1-like [Cucumis melo var. makuwa] >TYJ95...	[more]
XP_038874312.1	1.7e-245	98.06	heterogeneous nuclear ribonucleoprotein 1-like [Benincasa hispida]	[more]
XP_004147161.1	8.7e-242	96.98	heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus] >KAE8651801.1 hypoth...	[more]
XP_008460677.1	1.4e-239	96.76	PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Cucumis melo]	[more]
XP_022138553.1	3.5e-235	94.84	heterogeneous nuclear ribonucleoprotein 1-like [Momordica charantia]	[more]

BLAST of HG10010120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W034	3.1e-125	59.44	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP...	[more]
P51991	4.0e-40	36.12	Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens OX=9606 GN=HNRNPA3 PE...	[more]
P51990	2.9e-38	35.58	Heterogeneous nuclear ribonucleoprotein A2 homolog 2 OS=Xenopus laevis OX=8355 P...	[more]
P51989	6.4e-38	36.49	Heterogeneous nuclear ribonucleoprotein A2 homolog 1 OS=Xenopus laevis OX=8355 P...	[more]
Q920Q6	7.1e-37	37.08	RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1	[more]

BLAST of HG10010120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3B757	1.4e-266	93.02	Heterogeneous nuclear ribonucleoprotein 1-like OS=Cucumis melo var. makuwa OX=11...	[more]
A0A0A0LLG6	4.2e-242	96.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G171930 PE=4 SV=1	[more]
A0A1S3CDG3	6.7e-240	96.76	heterogeneous nuclear ribonucleoprotein 1-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1CDB1	1.7e-235	94.84	heterogeneous nuclear ribonucleoprotein 1-like OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1H3Z2	2.3e-232	95.06	heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of HG10010120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14300.1	2.2e-126	59.44	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G33410.1	3.9e-123	58.41	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.1	4.5e-55	41.18	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.2	4.5e-55	41.18	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G26650.1	1.2e-52	41.36	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 113..185 e-value: 6.0E-25 score: 98.9 coord: 7..78 e-value: 5.6E-20 score: 82.4
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 8..75 e-value: 6.4E-15 score: 54.8 coord: 114..172 e-value: 6.8E-16 score: 57.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 112..189 score: 18.580891
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 6..82 score: 16.721853
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 4..85 e-value: 4.9E-24 score: 86.4
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 86..208 e-value: 1.0E-26 score: 95.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 388..414
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 388..411
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..111
None	No IPR available	PANTHER	PTHR48035:SF2	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 1	coord: 1..461
None	No IPR available	PANTHER	PTHR48035	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 1	coord: 1..461
None	No IPR available	CDD	cd12325	RRM1_hnRNPA_hnRNPD_like	coord: 8..78 e-value: 1.04112E-36 score: 128.472
IPR034131	DAZ-associated protein 1, RNA recognition motif 2	CDD	cd12327	RRM2_DAZAP1	coord: 110..189 e-value: 4.94614E-45 score: 151.364
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 111..218
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 3..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10010120.1	HG10010120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding