HG10010092 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10010092
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr06: 18260601 .. 18260798 (-)
RNA-Seq ExpressionHG10010092
SyntenyHG10010092
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGAAACCTTCAGCTCCCACAATTTCAGACGCAGACATGAACACTCTGAAGCCGACGACGAAGACGACCACCAACAAGGCTTCGATCCCGGCATTCGCTTCCGAACCACCACCCGGAAGAATCGGCGGCGTTGGTGGTCCGATGAGCCGGAGCCGGAATTCGAAGACCAACCTTCTGGGATCTTGGATGAAGTAA

mRNA sequence

ATGCCGAAACCTTCAGCTCCCACAATTTCAGACGCAGACATGAACACTCTGAAGCCGACGACGAAGACGACCACCAACAAGGCTTCGATCCCGGCATTCGCTTCCGAACCACCACCCGGAAGAATCGGCGGCGTTGGTGGTCCGATGAGCCGGAGCCGGAATTCGAAGACCAACCTTCTGGGATCTTGGATGAAGTAA

Coding sequence (CDS)

ATGCCGAAACCTTCAGCTCCCACAATTTCAGACGCAGACATGAACACTCTGAAGCCGACGACGAAGACGACCACCAACAAGGCTTCGATCCCGGCATTCGCTTCCGAACCACCACCCGGAAGAATCGGCGGCGTTGGTGGTCCGATGAGCCGGAGCCGGAATTCGAAGACCAACCTTCTGGGATCTTGGATGAAGTAA

Protein sequence

MPKPSAPTISDADMNTLKPTTKTTTNKASIPAFASEPPPGRIGGVGGPMSRSRNSKTNLLGSWMK
Homology
The following BLAST results are available for this feature:
BLAST of HG10010092 vs.
Match NameE-valueIdentityDescription
BLAST of HG10010092 vs.
Match NameE-valueIdentityDescription
BLAST of HG10010092 vs.
Match NameE-valueIdentityDescription
BLAST of HG10010092 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..65

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10010092.1HG10010092.1mRNA