HG10010088 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCAGACGTTCTGTTGGACGACTGGAAGAAGCTTCGTCTGTCGGAAGAAGAAAAGGAAACAAAAATAGGATTAGACCCTAATATTGATTCATTTAACCAGGGTCAACTGGATTACTGTTTGGTTGGGAAGCTGCTGTCATCACGTTTCATTGCACCAAGAATTATCAAGAACACTTTCTCTAATGCGTGGAGAACAAAACTTGGTTTTAGCATTGGAAGTCTGGGGAAGAACATTTTTCTTATTAAATTTGATTCACGCAGGGATAAAGAAATGGTTCTCAAGTTGGGCCCGGGGCTATTTGATAATTCTTTACTAATTTTAGAAGTTCCAAAGGCCAACGTCAAAATTTCACAACTAACTTTTGACAAAGCAGCATTCTGGGTTTGTCTGTTAGATATTCCTCTTGGATTCCAGAACAAAATCATGGCTAGACGGTTGGGAGATGCAATGGGTGTTTTCTTAGAAGTAGATTGTGACCAAGATAATTGCTGTTGGGGAGAAAGTTTGAGAATCAAAATTTTAGTAGATATTACCAAACCTCTCAAATGAGGCATTTGGATTGAACCAGGAGGGGAAAAAGAGAGTATCTGGATTCAAGCAAAATATGAACGTTTGCCTGATTTTTGTTATGGTTGTGGCAGAATAGGCCATTTGGCTAAGGAGTGTAAACTGGGATCCGGATAGGCTGATCAAGATTCAGATTTTTTTCAATTTGGAAGTTGGCTTAGATTTCAAGGCAGCAACTCGAGACGTAGAAGGAAGTCCCCTCCCACTAAAGTCCAGGAAGACAGTTCCCCATATGATTTTCCCTCTTTCTAGGCCGATCTTGACATTCCTAAAGGAGATCCCTCCAGAATCTTTAAACAAAATTTGTCGGAGGAAAAAACCTTATCACCAAAGTCCAAAAATGTCGTGAATTCATCCACCTCAGCTGATCCTATAGATCTTAATATAAGACCAATGGAGTATGACTCAGTTTTGAACCCCTTTATTCCACAATTAGAGAAAGGAAAGGAAGCTTTTCATCAGTCCTTTAGTAAACCTCTCCAGATTCTTGAATCTTCTATCTCTCCTGGTGGGCCTCCTGGGAAAGAATGTTGA ATGGATTCAGACGTTCTGTTGGACGACTGGAAGAAGCTTCGTCTGTCGGAAGAAGAAAAGGAAACAAAAATAGGATTAGACCCTAATATTGATTCATTTAACCAGGGTCAACTGGATTACTGTTTGGTTGGGAAGCTGCTGTCATCACGTTTCATTGCACCAAGAATTATCAAGAACACTTTCTCTAATGCGTGGAGAACAAAACTTGGTTTTAGCATTGGAAGTCTGGGGAAGAACATTTTTCTTATTAAATTTGATTCACGCAGGGATAAAGAAATGGTTCTCAAGTTGGGCCCGGGGCTATTTGATAATTCTTTACTAATTTTAGAAGTTCCAAAGGCCAACGTCAAAATTTCACAACTAACTTTTGACAAAGCAGCATTCTGGGTTTGTCTGTTAGATATTCCTCTTGGATTCCAGAACAAAATCATGGCTAGACGGTTGGGAGATGCAATGGGTGTTTTCTTAGAAGCCGATCTTGACATTCCTAAAGGAGATCCCTCCAGAATCTTTAAACAAAATTTGTCGGAGGAAAAAACCTTATCACCAAAGTCCAAAAATGTCGTGAATTCATCCACCTCAGCTGATCCTATAGATCTTAATATAAGACCAATGGAGTATGACTCAGTTTTGAACCCCTTTATTCCACAATTAGAGAAAGGAAAGGAAGCTTTTCATCAGTCCTTTAGTAAACCTCTCCAGATTCTTGAATCTTCTATCTCTCCTGGTGGGCCTCCTGGGAAAGAATGTTGA ATGGATTCAGACGTTCTGTTGGACGACTGGAAGAAGCTTCGTCTGTCGGAAGAAGAAAAGGAAACAAAAATAGGATTAGACCCTAATATTGATTCATTTAACCAGGGTCAACTGGATTACTGTTTGGTTGGGAAGCTGCTGTCATCACGTTTCATTGCACCAAGAATTATCAAGAACACTTTCTCTAATGCGTGGAGAACAAAACTTGGTTTTAGCATTGGAAGTCTGGGGAAGAACATTTTTCTTATTAAATTTGATTCACGCAGGGATAAAGAAATGGTTCTCAAGTTGGGCCCGGGGCTATTTGATAATTCTTTACTAATTTTAGAAGTTCCAAAGGCCAACGTCAAAATTTCACAACTAACTTTTGACAAAGCAGCATTCTGGGTTTGTCTGTTAGATATTCCTCTTGGATTCCAGAACAAAATCATGGCTAGACGGTTGGGAGATGCAATGGGTGTTTTCTTAGAAGCCGATCTTGACATTCCTAAAGGAGATCCCTCCAGAATCTTTAAACAAAATTTGTCGGAGGAAAAAACCTTATCACCAAAGTCCAAAAATGTCGTGAATTCATCCACCTCAGCTGATCCTATAGATCTTAATATAAGACCAATGGAGTATGACTCAGTTTTGAACCCCTTTATTCCACAATTAGAGAAAGGAAAGGAAGCTTTTCATCAGTCCTTTAGTAAACCTCTCCAGATTCTTGAATCTTCTATCTCTCCTGGTGGGCCTCCTGGGAAAGAATGTTGA MDSDVLLDDWKKLRLSEEEKETKIGLDPNIDSFNQGQLDYCLVGKLLSSRFIAPRIIKNTFSNAWRTKLGFSIGSLGKNIFLIKFDSRRDKEMVLKLGPGLFDNSLLILEVPKANVKISQLTFDKAAFWVCLLDIPLGFQNKIMARRLGDAMGVFLEADLDIPKGDPSRIFKQNLSEEKTLSPKSKNVVNSSTSADPIDLNIRPMEYDSVLNPFIPQLEKGKEAFHQSFSKPLQILESSISPGGPPGKEC Homology
BLAST of HG10010088 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia]) HSP 1 Score: 132.1 bits (331), Expect = 6.6e-27 Identity = 62/159 (38.99%), Postives = 98/159 (61.64%), Query Frame = 0
BLAST of HG10010088 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia]) HSP 1 Score: 122.1 bits (305), Expect = 6.8e-24 Identity = 63/157 (40.13%), Postives = 91/157 (57.96%), Query Frame = 0
BLAST of HG10010088 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia]) HSP 1 Score: 110.2 bits (274), Expect = 2.7e-20 Identity = 55/160 (34.38%), Postives = 90/160 (56.25%), Query Frame = 0
BLAST of HG10010088 vs. NCBI nr
Match: XP_038688762.1 (uncharacterized protein LOC119987929 [Tripterygium wilfordii]) HSP 1 Score: 108.2 bits (269), Expect = 1.0e-19 Identity = 56/156 (35.90%), Postives = 86/156 (55.13%), Query Frame = 0
BLAST of HG10010088 vs. NCBI nr
Match: XP_042950155.1 (uncharacterized protein LOC122282269 [Carya illinoinensis]) HSP 1 Score: 107.1 bits (266), Expect = 2.3e-19 Identity = 58/157 (36.94%), Postives = 86/157 (54.78%), Query Frame = 0
BLAST of HG10010088 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 3.2e-27 Identity = 62/159 (38.99%), Postives = 98/159 (61.64%), Query Frame = 0
BLAST of HG10010088 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 3.3e-24 Identity = 63/157 (40.13%), Postives = 91/157 (57.96%), Query Frame = 0
BLAST of HG10010088 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 1.3e-20 Identity = 55/160 (34.38%), Postives = 90/160 (56.25%), Query Frame = 0
BLAST of HG10010088 vs. ExPASy TrEMBL
Match: A0A2N9EEA9 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS967 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 5.0e-20 Identity = 59/166 (35.54%), Postives = 92/166 (55.42%), Query Frame = 0
BLAST of HG10010088 vs. ExPASy TrEMBL
Match: A0A2N9HND5 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41125 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 5.0e-20 Identity = 59/166 (35.54%), Postives = 92/166 (55.42%), Query Frame = 0
BLAST of HG10010088 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding ) HSP 1 Score: 42.0 bits (97), Expect = 8.4e-04 Identity = 21/76 (27.63%), Postives = 38/76 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|