HG10010088 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10010088
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCCHC-type domain-containing protein
LocationChr06: 18215932 .. 18217038 (+)
RNA-Seq ExpressionHG10010088
SyntenyHG10010088
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCAGACGTTCTGTTGGACGACTGGAAGAAGCTTCGTCTGTCGGAAGAAGAAAAGGAAACAAAAATAGGATTAGACCCTAATATTGATTCATTTAACCAGGGTCAACTGGATTACTGTTTGGTTGGGAAGCTGCTGTCATCACGTTTCATTGCACCAAGAATTATCAAGAACACTTTCTCTAATGCGTGGAGAACAAAACTTGGTTTTAGCATTGGAAGTCTGGGGAAGAACATTTTTCTTATTAAATTTGATTCACGCAGGGATAAAGAAATGGTTCTCAAGTTGGGCCCGGGGCTATTTGATAATTCTTTACTAATTTTAGAAGTTCCAAAGGCCAACGTCAAAATTTCACAACTAACTTTTGACAAAGCAGCATTCTGGGTTTGTCTGTTAGATATTCCTCTTGGATTCCAGAACAAAATCATGGCTAGACGGTTGGGAGATGCAATGGGTGTTTTCTTAGAAGTAGATTGTGACCAAGATAATTGCTGTTGGGGAGAAAGTTTGAGAATCAAAATTTTAGTAGATATTACCAAACCTCTCAAATGAGGCATTTGGATTGAACCAGGAGGGGAAAAAGAGAGTATCTGGATTCAAGCAAAATATGAACGTTTGCCTGATTTTTGTTATGGTTGTGGCAGAATAGGCCATTTGGCTAAGGAGTGTAAACTGGGATCCGGATAGGCTGATCAAGATTCAGATTTTTTTCAATTTGGAAGTTGGCTTAGATTTCAAGGCAGCAACTCGAGACGTAGAAGGAAGTCCCCTCCCACTAAAGTCCAGGAAGACAGTTCCCCATATGATTTTCCCTCTTTCTAGGCCGATCTTGACATTCCTAAAGGAGATCCCTCCAGAATCTTTAAACAAAATTTGTCGGAGGAAAAAACCTTATCACCAAAGTCCAAAAATGTCGTGAATTCATCCACCTCAGCTGATCCTATAGATCTTAATATAAGACCAATGGAGTATGACTCAGTTTTGAACCCCTTTATTCCACAATTAGAGAAAGGAAAGGAAGCTTTTCATCAGTCCTTTAGTAAACCTCTCCAGATTCTTGAATCTTCTATCTCTCCTGGTGGGCCTCCTGGGAAAGAATGTTGA

mRNA sequence

ATGGATTCAGACGTTCTGTTGGACGACTGGAAGAAGCTTCGTCTGTCGGAAGAAGAAAAGGAAACAAAAATAGGATTAGACCCTAATATTGATTCATTTAACCAGGGTCAACTGGATTACTGTTTGGTTGGGAAGCTGCTGTCATCACGTTTCATTGCACCAAGAATTATCAAGAACACTTTCTCTAATGCGTGGAGAACAAAACTTGGTTTTAGCATTGGAAGTCTGGGGAAGAACATTTTTCTTATTAAATTTGATTCACGCAGGGATAAAGAAATGGTTCTCAAGTTGGGCCCGGGGCTATTTGATAATTCTTTACTAATTTTAGAAGTTCCAAAGGCCAACGTCAAAATTTCACAACTAACTTTTGACAAAGCAGCATTCTGGGTTTGTCTGTTAGATATTCCTCTTGGATTCCAGAACAAAATCATGGCTAGACGGTTGGGAGATGCAATGGGTGTTTTCTTAGAAGCCGATCTTGACATTCCTAAAGGAGATCCCTCCAGAATCTTTAAACAAAATTTGTCGGAGGAAAAAACCTTATCACCAAAGTCCAAAAATGTCGTGAATTCATCCACCTCAGCTGATCCTATAGATCTTAATATAAGACCAATGGAGTATGACTCAGTTTTGAACCCCTTTATTCCACAATTAGAGAAAGGAAAGGAAGCTTTTCATCAGTCCTTTAGTAAACCTCTCCAGATTCTTGAATCTTCTATCTCTCCTGGTGGGCCTCCTGGGAAAGAATGTTGA

Coding sequence (CDS)

ATGGATTCAGACGTTCTGTTGGACGACTGGAAGAAGCTTCGTCTGTCGGAAGAAGAAAAGGAAACAAAAATAGGATTAGACCCTAATATTGATTCATTTAACCAGGGTCAACTGGATTACTGTTTGGTTGGGAAGCTGCTGTCATCACGTTTCATTGCACCAAGAATTATCAAGAACACTTTCTCTAATGCGTGGAGAACAAAACTTGGTTTTAGCATTGGAAGTCTGGGGAAGAACATTTTTCTTATTAAATTTGATTCACGCAGGGATAAAGAAATGGTTCTCAAGTTGGGCCCGGGGCTATTTGATAATTCTTTACTAATTTTAGAAGTTCCAAAGGCCAACGTCAAAATTTCACAACTAACTTTTGACAAAGCAGCATTCTGGGTTTGTCTGTTAGATATTCCTCTTGGATTCCAGAACAAAATCATGGCTAGACGGTTGGGAGATGCAATGGGTGTTTTCTTAGAAGCCGATCTTGACATTCCTAAAGGAGATCCCTCCAGAATCTTTAAACAAAATTTGTCGGAGGAAAAAACCTTATCACCAAAGTCCAAAAATGTCGTGAATTCATCCACCTCAGCTGATCCTATAGATCTTAATATAAGACCAATGGAGTATGACTCAGTTTTGAACCCCTTTATTCCACAATTAGAGAAAGGAAAGGAAGCTTTTCATCAGTCCTTTAGTAAACCTCTCCAGATTCTTGAATCTTCTATCTCTCCTGGTGGGCCTCCTGGGAAAGAATGTTGA

Protein sequence

MDSDVLLDDWKKLRLSEEEKETKIGLDPNIDSFNQGQLDYCLVGKLLSSRFIAPRIIKNTFSNAWRTKLGFSIGSLGKNIFLIKFDSRRDKEMVLKLGPGLFDNSLLILEVPKANVKISQLTFDKAAFWVCLLDIPLGFQNKIMARRLGDAMGVFLEADLDIPKGDPSRIFKQNLSEEKTLSPKSKNVVNSSTSADPIDLNIRPMEYDSVLNPFIPQLEKGKEAFHQSFSKPLQILESSISPGGPPGKEC
Homology
BLAST of HG10010088 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 132.1 bits (331), Expect = 6.6e-27
Identity = 62/159 (38.99%), Postives = 98/159 (61.64%), Query Frame = 0

Query: 1   MDSDVLLDDWKKLRLSEEEKETKIGLDPNIDSFNQGQLDYCLVGKLLSSRFIAPRIIKNT 60
           MD + LL DW+K +L+ EE E  + +D +     +  L Y LVGKLL+ R I+  ++   
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 61  FSNAWRTKLGFSIGSLGKNIFLIKFDSRRDKEMVLKLGPGLFDNSLLILEVPKANVKISQ 120
              AW+ +   ++ S+GKN+FL  F    D   V+K GP  FD +L++L+ P ++  IS+
Sbjct: 61  LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120

Query: 121 LTFDKAAFWVCLLDIPLGFQNKIMARRLGDAMGVFLEAD 160
           L F++ AFW+ L D+P+ + NK MA RLG+A+G F++ D
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVD 159

BLAST of HG10010088 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 122.1 bits (305), Expect = 6.8e-24
Identity = 63/157 (40.13%), Postives = 91/157 (57.96%), Query Frame = 0

Query: 6   LLDDWKKLRLSEEEKETKIGLDPNIDSFNQGQLDYCLVGKLLSSRFIAPRIIKNTFSNAW 65
           LL++WK  +L+ EE+ET I +D +  +    +L+  LVGKL   R I   ++KNT   AW
Sbjct: 6   LLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTAW 65

Query: 66  RTK-LGFSIGSLGKNIFLIKFDSRRDKEMVLKLGPGLFDNSLLILEVPKANVKISQLTFD 125
           + +   F + SLG N+FL  F    D+  + K GP  FD +L+++  P A +  S+L F 
Sbjct: 66  KLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDFT 125

Query: 126 KAAFWVCLLDIPLGFQNKIMARRLGDAMGVFLEADLD 162
           K   WV   D+PLG   + MA RLG+A+G F EAD D
Sbjct: 126 KLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCD 162

BLAST of HG10010088 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 110.2 bits (274), Expect = 2.7e-20
Identity = 55/160 (34.38%), Postives = 90/160 (56.25%), Query Frame = 0

Query: 1   MDSDVLLDDWKKLRLSEEEKETKIGLDPNIDSFNQGQLDYCLVGKLLSSRFIAPRIIKNT 60
           M +  LL++WK  +L+ EE +  + +D +        L+  L+ KLLS R I+  ++KNT
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 61  FSNAWRTKL-GFSIGSLGKNIFLIKFDSRRDKEMVLKLGPGLFDNSLLILEVPKANVKIS 120
              AW+     FS+  +G NIFL  F+   D+  +L++GP  FD +L+I++ P +  K  
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 121 QLTFDKAAFWVCLLDIPLGFQNKIMARRLGDAMGVFLEAD 160
            + F   + WV   D+ L   NK MA RLG+A+G+F + +
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVE 160

BLAST of HG10010088 vs. NCBI nr
Match: XP_038688762.1 (uncharacterized protein LOC119987929 [Tripterygium wilfordii])

HSP 1 Score: 108.2 bits (269), Expect = 1.0e-19
Identity = 56/156 (35.90%), Postives = 86/156 (55.13%), Query Frame = 0

Query: 10  WKKLRLSEEEKETKIGLDPNIDSFNQGQLDYCLVGKLLSSRFIAPRIIKNTFSNAWRTKL 69
           W KL++++EEK+  I +D     F++      + GK++  RFIA  ++     N W+T  
Sbjct: 8   WSKLKVTDEEKQ-GISVDQEDMPFSKDSTRRGVFGKVVMDRFIATEVVARNMMNVWKTSA 67

Query: 70  GFSIGSLGKNIFLIKFDSRRDKEMVLKLGPGLFDNSLLILEVPKANVKISQLTFDKAAFW 129
                 LGKNIF I F S  DK  V++  P LFD SLL+L+  ++ V I  L FD   FW
Sbjct: 68  PLKFHDLGKNIFAIIFHSEHDKRRVMEGRPWLFDRSLLVLKEMESEVPIKDLQFDTEWFW 127

Query: 130 VCLLDIPLGFQNKIMARRLGDAMGVFLEADLDIPKG 166
           V L ++PL   ++ +  ++G  +G  +E D D P+G
Sbjct: 128 VQLHNLPLAGMSRALGEKIGGTIGDVVEVDAD-PEG 161

BLAST of HG10010088 vs. NCBI nr
Match: XP_042950155.1 (uncharacterized protein LOC122282269 [Carya illinoinensis])

HSP 1 Score: 107.1 bits (266), Expect = 2.3e-19
Identity = 58/157 (36.94%), Postives = 86/157 (54.78%), Query Frame = 0

Query: 4   DVLLDDWKKLRLSEEEKETKIGLDPNIDSFNQGQLDYCLVGKLLSSRFIAPRIIKNTFSN 63
           D L + WK  RLSEEE+E+ I +D    + +  + +  LVGKL S R +   +I NT S 
Sbjct: 2   DALEEKWKHFRLSEEEEES-IVVDEESLAVSLRKGERSLVGKLCSDRVVNKDVIHNTMSK 61

Query: 64  AWRTKLGFSIGSLGKNIFLIKFDSRRDKEMVLKLGPGLFDNSLLILEVPKANVKISQLTF 123
            WR    F   S+  N+F+I F+   D E V    P LFDN+L +L+     V  +QL  
Sbjct: 62  IWRVNKPFQFQSISSNLFVIMFEDEADMEKVKMGKPWLFDNNLFVLKPFDGLVSPNQLVL 121

Query: 124 DKAAFWVCLLDIPLGFQNKIMARRLGDAMGVFLEADL 161
           D  AFW+ L ++PL   NK +  ++G ++G  L+ D+
Sbjct: 122 DTEAFWIQLYNLPLACMNKKIGTQIGSSIGEVLDIDV 157

BLAST of HG10010088 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 3.2e-27
Identity = 62/159 (38.99%), Postives = 98/159 (61.64%), Query Frame = 0

Query: 1   MDSDVLLDDWKKLRLSEEEKETKIGLDPNIDSFNQGQLDYCLVGKLLSSRFIAPRIIKNT 60
           MD + LL DW+K +L+ EE E  + +D +     +  L Y LVGKLL+ R I+  ++   
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 61  FSNAWRTKLGFSIGSLGKNIFLIKFDSRRDKEMVLKLGPGLFDNSLLILEVPKANVKISQ 120
              AW+ +   ++ S+GKN+FL  F    D   V+K GP  FD +L++L+ P ++  IS+
Sbjct: 61  LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120

Query: 121 LTFDKAAFWVCLLDIPLGFQNKIMARRLGDAMGVFLEAD 160
           L F++ AFW+ L D+P+ + NK MA RLG+A+G F++ D
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVD 159

BLAST of HG10010088 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 3.3e-24
Identity = 63/157 (40.13%), Postives = 91/157 (57.96%), Query Frame = 0

Query: 6   LLDDWKKLRLSEEEKETKIGLDPNIDSFNQGQLDYCLVGKLLSSRFIAPRIIKNTFSNAW 65
           LL++WK  +L+ EE+ET I +D +  +    +L+  LVGKL   R I   ++KNT   AW
Sbjct: 6   LLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTAW 65

Query: 66  RTK-LGFSIGSLGKNIFLIKFDSRRDKEMVLKLGPGLFDNSLLILEVPKANVKISQLTFD 125
           + +   F + SLG N+FL  F    D+  + K GP  FD +L+++  P A +  S+L F 
Sbjct: 66  KLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDFT 125

Query: 126 KAAFWVCLLDIPLGFQNKIMARRLGDAMGVFLEADLD 162
           K   WV   D+PLG   + MA RLG+A+G F EAD D
Sbjct: 126 KLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCD 162

BLAST of HG10010088 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.3e-20
Identity = 55/160 (34.38%), Postives = 90/160 (56.25%), Query Frame = 0

Query: 1   MDSDVLLDDWKKLRLSEEEKETKIGLDPNIDSFNQGQLDYCLVGKLLSSRFIAPRIIKNT 60
           M +  LL++WK  +L+ EE +  + +D +        L+  L+ KLLS R I+  ++KNT
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 61  FSNAWRTKL-GFSIGSLGKNIFLIKFDSRRDKEMVLKLGPGLFDNSLLILEVPKANVKIS 120
              AW+     FS+  +G NIFL  F+   D+  +L++GP  FD +L+I++ P +  K  
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 121 QLTFDKAAFWVCLLDIPLGFQNKIMARRLGDAMGVFLEAD 160
            + F   + WV   D+ L   NK MA RLG+A+G+F + +
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVE 160

BLAST of HG10010088 vs. ExPASy TrEMBL
Match: A0A2N9EEA9 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS967 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 5.0e-20
Identity = 59/166 (35.54%), Postives = 92/166 (55.42%), Query Frame = 0

Query: 1   MDSDVLLDDWKKLRLSEEEKETKIGLDPNIDSF-NQGQL-DYCLVGKLLSSRFIAPRIIK 60
           MDS+ LLDDW+K  L+E+E     G D   D+  N  +L   CLVGKL+++++     +K
Sbjct: 1   MDSEALLDDWRKFSLTEDEAP---GFDVEEDAMGNSRELGSKCLVGKLVTAKYFNRAALK 60

Query: 61  NTFSNAWRTKLGFSIGSLGKNIFLIKFDSRRDKEMVLKLGPGLFDNSLLILEVPKANVKI 120
            T    W T  G +  S+  N+F+ +F + ++++ VL   P LFDN LLIL V    +  
Sbjct: 61  TTMLRLWGTSRGITATSIDANLFVFQFPNAQERQRVLDGSPWLFDNCLLILNVIDGTIPA 120

Query: 121 SQLTFDKAAFWVCLLDIPLGFQNKIMARRLGDAMGVFLEADLDIPK 165
           SQ+   ++ FWV L  IPL +  +    R+G   G  ++  +D+PK
Sbjct: 121 SQVQMQRSCFWVQLHGIPLFYMTRETGERVGSIFGEVMK--VDVPK 161

BLAST of HG10010088 vs. ExPASy TrEMBL
Match: A0A2N9HND5 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41125 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 5.0e-20
Identity = 59/166 (35.54%), Postives = 92/166 (55.42%), Query Frame = 0

Query: 1   MDSDVLLDDWKKLRLSEEEKETKIGLDPNIDSF-NQGQL-DYCLVGKLLSSRFIAPRIIK 60
           MDS+ LLDDW+K  L+E+E     G D   D+  N  +L   CLVGKL+++++     +K
Sbjct: 1   MDSEALLDDWRKFSLTEDEAP---GFDVEEDAMGNSRELGSKCLVGKLVTAKYFNRAALK 60

Query: 61  NTFSNAWRTKLGFSIGSLGKNIFLIKFDSRRDKEMVLKLGPGLFDNSLLILEVPKANVKI 120
            T    W T  G +  S+  N+F+ +F + ++++ VL   P LFDN LLIL V    +  
Sbjct: 61  TTMLRLWGTSRGITATSIDANLFVFQFPNAQERQRVLDGSPWLFDNCLLILNVIDGTIPA 120

Query: 121 SQLTFDKAAFWVCLLDIPLGFQNKIMARRLGDAMGVFLEADLDIPK 165
           SQ+   ++ FWV L  IPL +  +    R+G   G  ++  +D+PK
Sbjct: 121 SQVQMQRSCFWVQLHGIPLFYMTRETGERVGSIFGEVMK--VDVPK 161

BLAST of HG10010088 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 42.0 bits (97), Expect = 8.4e-04
Identity = 21/76 (27.63%), Postives = 38/76 (50.00%), Query Frame = 0

Query: 85  FDSRRDKEMVLKLGPGLFDNSLLILEVPKANVKISQLTFDKAAFWVCLLDIPLGFQNKIM 144
           F S      +L+ GP  F++ + +++  +     S   F +  FW+ +  IPL F    +
Sbjct: 66  FQSEESMFSILRRGPWSFNDWMCVIQ--RWTKLHSDAEFKRIPFWIQIRGIPLRFLTARI 125

Query: 145 ARRLGDAMGVFLEADL 161
              +G+ MG+FLE +L
Sbjct: 126 ITSIGERMGLFLETNL 139

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022156185.16.6e-2738.99uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... [more]
XP_022158377.16.8e-2440.13uncharacterized protein LOC111024874 [Momordica charantia][more]
XP_022132681.12.7e-2034.38uncharacterized protein LOC111005481 [Momordica charantia][more]
XP_038688762.11.0e-1935.90uncharacterized protein LOC119987929 [Tripterygium wilfordii][more]
XP_042950155.12.3e-1936.94uncharacterized protein LOC122282269 [Carya illinoinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DU553.2e-2738.99uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DX303.3e-2440.13uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A6J1BSZ11.3e-2034.38uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A2N9EEA95.0e-2035.54CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS967 ... [more]
A0A2N9HND55.0e-2035.54CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4112... [more]
Match NameE-valueIdentityDescription
AT3G42140.18.4e-0427.63zinc ion binding;nucleic acid binding [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 36..159
e-value: 5.4E-21
score: 74.6
NoneNo IPR availablePANTHERPTHR31286:SF84SUBFAMILY NOT NAMEDcoord: 12..161
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 12..161

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10010088.1HG10010088.1mRNA