HG10010087 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10010087
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	GATA transcription factor
Location	Chr06: 18209926 .. 18211405 (-)
RNA-Seq Expression	HG10010087
Synteny	HG10010087

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTCTTCTTTGGCTTTCATGGATGACCTTCTGGATTTCTCCTCGGATATAGGTGAGGAAGATGAAGAAGACGACGTCGTTCCACCCTTTTCCGTTAAGCCTAAATCTTCTTCTACCACGGCGGCGGACTCGTCGGAGTTGAACGCCGCTATGCACCCGGATGATTCTTCTTCTTGCCGTGTTTTGCCTGTAAGTCTTTTTTTATTCTTTCCCGCCGGTGGGGGTTTTTTTTGGTTGTGAAAATGGGTTCATTACTGAGTTGACTCGCCTGGTTGACTCGTCCGAGTTTAGAAAAAGTTAGAGTTGGGTGGGTGGGGGTGGGTGGGGATCAGTTGAAATGACATAAATGTCCCTGGAAAACTGGATGGATTAGGAAACTTATGGAGGGTATTTTAGGTAATTCGTGAATGGGGTCCTTTTTATGTGGTTCTGAGCTGTCGTCCGTTAGGTTTAGAATTGTATGCTTGTAATAATAATATCCGAGAGAGAGGGAGTGGTAATATCAATCAATATTGAATATTGATACGGCCACTCTCCTCTTCCTTTGAAATGACATTTTTACCCCTACCCCCCAACATTCCTCCAACGTATACGACTAAGCTTATTCGTCCTTTTCCTTTTCACTTTCCAGTAACCCCCCAGCAGTCACGCCTTTTCCATACCAATGTTTAAAAAAATGGCAATAATTTAATTTAATTATTAATTATTATTGTTATTATAATTATTGGTGGACCAAAACAAAAGGACGGAACCGAGTTGACTCGGTTAGTTTAGGCCGAGTTGCTGAAAAGAAACTCGTTTGTTTTTTGGGCCTTAGGAAGAAGATTATGGAGAGGAAGAACTCGAGTGGCTATCAAACGAAGATGCATTTCCGGCCGTTGAGACATTCGTCGACATTCTCTCCGACCACCACCACCACGCGCCGCCGCCTCCGCCGTTAACGAGCGTTTCGAAACAGAATAGTCCGGTTTCGGTTCTCGAAAGCACTTCAATCAGCAGCCATGGTGAAACCAACAACAGTGGTAATAAAACGAGTCTCCATGGTAGTAGCATTCTGATGAGCTGCTGCGACGGCCTGAAAGTTCCCGGCAAGGCCCGAAGCAAGCGCCGCCGTGGACGACACATTTCCGGCCACCATCTCTGGTTCAAGCAGCAACCCAGTTCGAAGAATGTAAAGCAAGTAGTACCCACCACCGCGACGGCGGCGGCGGTGACTGCGACGGCGGCGATTGGGAGAAAGTGCCTACATTGTGGAGCGGAAAAAACGCCGCAATGGCGAGCCGGTCCATTTGGACCGAAAACGTTGTGTAATGCTTGTGGAGTGAGGTACAAATCAGGGCGTTTGGTGCCGGAATACCGGCCGGCGAGTAGTCCGACGTTCTCGGCGGAGCTGCACTCGAATTCTCACCGGAAAGTGATGGAAATGAGGAGACAGAAGCAGTTAGGTATGGTGGTGAATCCAATGGATAAAGGGTGA

mRNA sequence

ATGGAGTCTTCTTTGGCTTTCATGGATGACCTTCTGGATTTCTCCTCGGATATAGGTGAGGAAGATGAAGAAGACGACGTCGTTCCACCCTTTTCCGTTAAGCCTAAATCTTCTTCTACCACGGCGGCGGACTCGTCGGAGTTGAACGCCGCTATGCACCCGGATGATTCTTCTTCTTGCCGTGTTTTGCCTGAAGAAGATTATGGAGAGGAAGAACTCGAGTGGCTATCAAACGAAGATGCATTTCCGGCCGTTGAGACATTCGTCGACATTCTCTCCGACCACCACCACCACGCGCCGCCGCCTCCGCCGTTAACGAGCGTTTCGAAACAGAATAGTCCGGTTTCGGTTCTCGAAAGCACTTCAATCAGCAGCCATGGTGAAACCAACAACAGTGGTAATAAAACGAGTCTCCATGGTAGTAGCATTCTGATGAGCTGCTGCGACGGCCTGAAAGTTCCCGGCAAGGCCCGAAGCAAGCGCCGCCGTGGACGACACATTTCCGGCCACCATCTCTGGTTCAAGCAGCAACCCAGTTCGAAGAATGTAAAGCAAGTAGTACCCACCACCGCGACGGCGGCGGCGGTGACTGCGACGGCGGCGATTGGGAGAAAGTGCCTACATTGTGGAGCGGAAAAAACGCCGCAATGGCGAGCCGGTCCATTTGGACCGAAAACGTTGTGTAATGCTTGTGGAGTGAGGTACAAATCAGGGCGTTTGGTGCCGGAATACCGGCCGGCGAGTAGTCCGACGTTCTCGGCGGAGCTGCACTCGAATTCTCACCGGAAAGTGATGGAAATGAGGAGACAGAAGCAGTTAGGTATGGTGGTGAATCCAATGGATAAAGGGTGA

Coding sequence (CDS)

ATGGAGTCTTCTTTGGCTTTCATGGATGACCTTCTGGATTTCTCCTCGGATATAGGTGAGGAAGATGAAGAAGACGACGTCGTTCCACCCTTTTCCGTTAAGCCTAAATCTTCTTCTACCACGGCGGCGGACTCGTCGGAGTTGAACGCCGCTATGCACCCGGATGATTCTTCTTCTTGCCGTGTTTTGCCTGAAGAAGATTATGGAGAGGAAGAACTCGAGTGGCTATCAAACGAAGATGCATTTCCGGCCGTTGAGACATTCGTCGACATTCTCTCCGACCACCACCACCACGCGCCGCCGCCTCCGCCGTTAACGAGCGTTTCGAAACAGAATAGTCCGGTTTCGGTTCTCGAAAGCACTTCAATCAGCAGCCATGGTGAAACCAACAACAGTGGTAATAAAACGAGTCTCCATGGTAGTAGCATTCTGATGAGCTGCTGCGACGGCCTGAAAGTTCCCGGCAAGGCCCGAAGCAAGCGCCGCCGTGGACGACACATTTCCGGCCACCATCTCTGGTTCAAGCAGCAACCCAGTTCGAAGAATGTAAAGCAAGTAGTACCCACCACCGCGACGGCGGCGGCGGTGACTGCGACGGCGGCGATTGGGAGAAAGTGCCTACATTGTGGAGCGGAAAAAACGCCGCAATGGCGAGCCGGTCCATTTGGACCGAAAACGTTGTGTAATGCTTGTGGAGTGAGGTACAAATCAGGGCGTTTGGTGCCGGAATACCGGCCGGCGAGTAGTCCGACGTTCTCGGCGGAGCTGCACTCGAATTCTCACCGGAAAGTGATGGAAATGAGGAGACAGAAGCAGTTAGGTATGGTGGTGAATCCAATGGATAAAGGGTGA

Protein sequence

MESSLAFMDDLLDFSSDIGEEDEEDDVVPPFSVKPKSSSTTAADSSELNAAMHPDDSSSCRVLPEEDYGEEELEWLSNEDAFPAVETFVDILSDHHHHAPPPPPLTSVSKQNSPVSVLESTSISSHGETNNSGNKTSLHGSSILMSCCDGLKVPGKARSKRRRGRHISGHHLWFKQQPSSKNVKQVVPTTATAAAVTATAAIGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVRYKSGRLVPEYRPASSPTFSAELHSNSHRKVMEMRRQKQLGMVVNPMDKG

Homology

[Close]

BLAST of HG10010087 vs. NCBI nr
Match: XP_038875635.1 (GATA transcription factor 1 [Benincasa hispida])

HSP 1 Score: 531.2 bits (1367), Expect = 5.5e-147
Identity = 275/286 (96.15%), Postives = 277/286 (96.85%), Query Frame = 0


Query: 1   MESSLAFMDDLLDFSSDIGEEDEEDDVVPPFSVKPKSSSTTAADSSELN-AAMHPDDSSS 60
           MESSLAFMDDLLDFSSDIGEEDEEDDVVPPFSVKPKSSSTTAADSSELN AAMHPDDSSS
Sbjct: 1   MESSLAFMDDLLDFSSDIGEEDEEDDVVPPFSVKPKSSSTTAADSSELNAAAMHPDDSSS 60

Query: 61  CRVLPEEDYGEEELEWLSNEDAFPAVETFVDILSDHHHHA-PPPPPLTSVSKQNSPVSVL 120
           CRVLPEEDYGEEELEWLSNEDAFPAVETFVDILSDHHHHA PPPPPLTSVSKQNSPVSVL
Sbjct: 61  CRVLPEEDYGEEELEWLSNEDAFPAVETFVDILSDHHHHAPPPPPPLTSVSKQNSPVSVL 120

Query: 121 ESTSISSHGETNNSGNKTSLHGS-SILMSCCDGLKVPGKARSKRRRGRHISGHHLWFKQQ 180
           ESTSISSHGETNN GNK S+HGS SILMSCC GLKVPGKARSKRRRGRHISGHHLWFKQQ
Sbjct: 121 ESTSISSHGETNNGGNKMSVHGSGSILMSCCGGLKVPGKARSKRRRGRHISGHHLWFKQQ 180

Query: 181 PSSKNVKQVVPTTATAAAVTATAAIGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVRYKS 240
           PSSKNVKQVV TTAT AAVT TAAIGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVR+KS
Sbjct: 181 PSSKNVKQVVSTTAT-AAVTGTAAIGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVRFKS 240

Query: 241 GRLVPEYRPASSPTFSAELHSNSHRKVMEMRRQKQLGMVVNPMDKG 284
           GRLVPEYRPASSPTFSAELHSNSHRKVMEMRRQKQLGMVVNPMDKG
Sbjct: 241 GRLVPEYRPASSPTFSAELHSNSHRKVMEMRRQKQLGMVVNPMDKG 285

[Close]

BLAST of HG10010087 vs. NCBI nr
Match: XP_008460721.1 (PREDICTED: GATA transcription factor 1 [Cucumis melo])

HSP 1 Score: 518.8 bits (1335), Expect = 2.8e-143
Identity = 267/288 (92.71%), Postives = 272/288 (94.44%), Query Frame = 0


Query: 1   MESSLAFMDDLLDFSSDIGEEDEEDDVVPPFSVKPKSSSTTAADSSELN-AAMHPDDSSS 60
           MESSLAFMDDLLDFSSDIGEEDEEDD VPPFSVK KSSSTTA DSS+LN AAMHPDDSSS
Sbjct: 1   MESSLAFMDDLLDFSSDIGEEDEEDDAVPPFSVKSKSSSTTAPDSSDLNAAAMHPDDSSS 60

Query: 61  CRVLPEEDYGEEELEWLSNEDAFPAVETFVDILSD-HHHHAPPPPPLTSVSKQNSPVSVL 120
           CRVLPEEDY EEELEWLSNEDAFPAVETFVDILSD HHHHAP PPPLTSVSKQNSPVSVL
Sbjct: 61  CRVLPEEDYAEEELEWLSNEDAFPAVETFVDILSDHHHHHAPQPPPLTSVSKQNSPVSVL 120

Query: 121 ESTSISSHGETNNSGNKTSLHGSSILMSCCDGLKVPGKARSKRRRGRHISGHHLWFKQQP 180
           ESTSISSHGET N GNKTS+HGSSILMSCC GLKVPGKARSKRRRGRHISGHHLWFKQQP
Sbjct: 121 ESTSISSHGETINGGNKTSVHGSSILMSCCGGLKVPGKARSKRRRGRHISGHHLWFKQQP 180

Query: 181 SSKNVKQVVPTTATAAAVTAT---AAIGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVRY 240
           SSKN+KQVVPTT TAAAV AT   A IGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVR+
Sbjct: 181 SSKNLKQVVPTTETAAAVAATTGAAGIGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVRF 240

Query: 241 KSGRLVPEYRPASSPTFSAELHSNSHRKVMEMRRQKQLGMVVNPMDKG 284
           KSGRLVPEYRPASSPTFSA+LHSNSHRKVMEMRRQKQLGMVVNPMDKG
Sbjct: 241 KSGRLVPEYRPASSPTFSADLHSNSHRKVMEMRRQKQLGMVVNPMDKG 288

[Close]

BLAST of HG10010087 vs. NCBI nr
Match: KAA0031991.1 (GATA transcription factor 1 [Cucumis melo var. makuwa])

HSP 1 Score: 506.5 bits (1303), Expect = 1.5e-139
Identity = 260/281 (92.53%), Postives = 265/281 (94.31%), Query Frame = 0


Query: 8   MDDLLDFSSDIGEEDEEDDVVPPFSVKPKSSSTTAADSSELN-AAMHPDDSSSCRVLPEE 67
           MDDLLDFSSDIGEEDEEDD VPPFSVK KSSSTTA DSS+LN AAMHPDDSSSCRVLPEE
Sbjct: 1   MDDLLDFSSDIGEEDEEDDAVPPFSVKSKSSSTTAPDSSDLNAAAMHPDDSSSCRVLPEE 60

Query: 68  DYGEEELEWLSNEDAFPAVETFVDILSD-HHHHAPPPPPLTSVSKQNSPVSVLESTSISS 127
           DY EEELEWLSNEDAFPAVETFVDILSD HHHHAP PPPLTSVSKQNSPVSVLESTSISS
Sbjct: 61  DYAEEELEWLSNEDAFPAVETFVDILSDHHHHHAPQPPPLTSVSKQNSPVSVLESTSISS 120

Query: 128 HGETNNSGNKTSLHGSSILMSCCDGLKVPGKARSKRRRGRHISGHHLWFKQQPSSKNVKQ 187
           HGET N GNKTS+HGSSILMSCC GLKVPGKARSKRRRGRHISGHHLWFKQQPSSKN+KQ
Sbjct: 121 HGETINGGNKTSVHGSSILMSCCGGLKVPGKARSKRRRGRHISGHHLWFKQQPSSKNLKQ 180

Query: 188 VVPTTATAAAVTAT---AAIGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVRYKSGRLVP 247
           VVPTT TAAAV AT   A IGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVR+KSGRLVP
Sbjct: 181 VVPTTETAAAVAATTGAAGIGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVRFKSGRLVP 240

Query: 248 EYRPASSPTFSAELHSNSHRKVMEMRRQKQLGMVVNPMDKG 284
           EYRPASSPTFSA+LHSNSHRKVMEMRRQKQLGMVVNPMDKG
Sbjct: 241 EYRPASSPTFSADLHSNSHRKVMEMRRQKQLGMVVNPMDKG 281

[Close]

BLAST of HG10010087 vs. NCBI nr
Match: XP_004150343.1 (GATA transcription factor 1 [Cucumis sativus] >KGN61534.1 hypothetical protein Csa_006407 [Cucumis sativus])

HSP 1 Score: 504.2 bits (1297), Expect = 7.3e-139
Identity = 263/288 (91.32%), Postives = 267/288 (92.71%), Query Frame = 0


Query: 1   MESSLAFMDDLLDFSSDIGEEDEEDDVVPPFSVKPKSSSTTAADSSELN-AAMHPDDSSS 60
           MESSLAFMDDLLDFSSDIGEEDEEDD VPPFSVKPKSSSTTA DSS+LN AAMHPDDSSS
Sbjct: 1   MESSLAFMDDLLDFSSDIGEEDEEDDAVPPFSVKPKSSSTTAPDSSDLNAAAMHPDDSSS 60

Query: 61  CRVLPEEDYGEEELEWLSNEDAFPAVETFVDILSD-HHHHAPPPPPLTSVSKQNSPVSVL 120
           CRVLPEE Y EEELEWLSNEDAFPAVETFVDILSD HHHHAP PPPL SVSKQNSPVSVL
Sbjct: 61  CRVLPEE-YAEEELEWLSNEDAFPAVETFVDILSDHHHHHAPQPPPLPSVSKQNSPVSVL 120

Query: 121 ESTSISSHGETNNSGNKTSLHGSSILMSCCDGLKVPGKARSKRRRGRHISGHHLWFKQQP 180
           ESTSISSHGET N GNKTS+H SSILMSCC  LKVP KARSKRRRGRHISGHHL FKQQP
Sbjct: 121 ESTSISSHGETTNGGNKTSVHSSSILMSCCGSLKVPSKARSKRRRGRHISGHHLLFKQQP 180

Query: 181 SSKNVKQVVPTTATA---AAVTATAAIGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVRY 240
           SSKN+KQVVPTTATA   AA T TA IGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVR+
Sbjct: 181 SSKNLKQVVPTTATAAVVAATTGTAGIGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVRF 240

Query: 241 KSGRLVPEYRPASSPTFSAELHSNSHRKVMEMRRQKQLGMVVNPMDKG 284
           KSGRLVPEYRPASSPTFSAELHSNSHRKVMEMRRQKQLGMVVNPMDKG
Sbjct: 241 KSGRLVPEYRPASSPTFSAELHSNSHRKVMEMRRQKQLGMVVNPMDKG 287

[Close]

BLAST of HG10010087 vs. NCBI nr
Match: KAG7013448.1 (GATA transcription factor 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 473.8 bits (1218), Expect = 1.0e-129
Identity = 244/290 (84.14%), Postives = 253/290 (87.24%), Query Frame = 0


Query: 1   MESSLAFMDDLLDFSSDIGEEDEEDDVVPPFSVKPKSSSTTAA--DSSELNAAMHPDDSS 60
           MESSLAFMDDLLDFSSDIG EDEEDD VPPFSVKPK+++TTAA  DSSE NA  HP+DSS
Sbjct: 1   MESSLAFMDDLLDFSSDIGGEDEEDDAVPPFSVKPKAATTTAAATDSSEFNAGFHPEDSS 60

Query: 61  SCRVLPEEDYGEEELEWLSNEDAFPAVETFVDILSDHHHHAPPPPPLTSVSKQNSPVSVL 120
           SCRVLPEEDY EEELEWLSNED FPAVETFVDILSDHHH  P PP L SVSKQNSPVSVL
Sbjct: 61  SCRVLPEEDYAEEELEWLSNEDVFPAVETFVDILSDHHHDQPQPPSLMSVSKQNSPVSVL 120

Query: 121 ESTSISSHGETNNSGNKTSLHGSSILMSCCDGLKVPGKARSKRRRGRHISGHHLWFKQQP 180
           E+TSISSHG     GNK S HG SILMSCCDGLKVPGKARSKRRR RH+SGHHLWFKQQP
Sbjct: 121 ETTSISSHG-----GNKPSAHG-SILMSCCDGLKVPGKARSKRRRSRHVSGHHLWFKQQP 180

Query: 181 SSKNVKQVVPTTAT-----AAAVTATAAIGRKCLHCGAEKTPQWRAGPFGPKTLCNACGV 240
           SS+NVKQ+ PTT       AA  TA  AIGRKCLHCGAEKTPQWRAGP+GPKTLCNACGV
Sbjct: 181 SSRNVKQIQPTTTATGTTPAAVTTAKTAIGRKCLHCGAEKTPQWRAGPYGPKTLCNACGV 240

Query: 241 RYKSGRLVPEYRPASSPTFSAELHSNSHRKVMEMRRQKQLGMVVNPMDKG 284
           RYKSGRLVPEYRPASSPTFS ELHSNSHRKVMEMRRQKQ GMVVNPMDKG
Sbjct: 241 RYKSGRLVPEYRPASSPTFSPELHSNSHRKVMEMRRQKQFGMVVNPMDKG 284

[Close]

BLAST of HG10010087 vs. ExPASy Swiss-Prot
Match: Q8LAU9 (GATA transcription factor 1 OS=Arabidopsis thaliana OX=3702 GN=GATA1 PE=2 SV=2)

HSP 1 Score: 222.6 bits (566), Expect = 5.5e-57
Identity = 139/285 (48.77%), Postives = 174/285 (61.05%), Query Frame = 0


Query: 6   AFMDDLLDFSSDIGEEDEEDDVVPPFSVKPKSSSTTAADSSELNAAMHPDDSSSCRVLPE 65
           +FMDDLL+FS    EED+++   PP ++  + +     DS  L    + DD         
Sbjct: 5   SFMDDLLNFSVPEEEEDDDEHTQPPRNITRRKTGLRPTDSFGL---FNTDDLGVVE---- 64

Query: 66  EDYGEEELEWLSNEDAFPAVETFVDILSDHHHHAPPPPPLTSV-------SKQNSPVSVL 125
               EE+LEW+SN++AFP +ETFV +L   H       P+TS+        KQ SPVSVL
Sbjct: 65  ----EEDLEWISNKNAFPVIETFVGVLPSEHF------PITSLLEREATEVKQLSPVSVL 124

Query: 126 ESTSISSHGETNNSGNKTSLHGSS---------ILMSCCDGLKVPGKARSKRRRGRHISG 185
           E++S SS   T+NS   +  +GS+          +MSCC G K P KARSKRRR      
Sbjct: 125 ETSSHSSTTTTSNSSGGS--NGSTAVATTTTTPTIMSCCVGFKAPAKARSKRRRTGRRDL 184

Query: 186 HHLWFKQQPSSKNVKQVVPTTATAAAVTATAAIGRKCLHCGAEKTPQWRAGPFGPKTLCN 245
             LW   +      K+ + T A AA +     +GRKC HCGAEKTPQWRAGP GPKTLCN
Sbjct: 185 RVLWTGNEQGGIQKKKTM-TVAAAALI-----MGRKCQHCGAEKTPQWRAGPAGPKTLCN 244

Query: 246 ACGVRYKSGRLVPEYRPASSPTFSAELHSNSHRKVMEMRRQKQLG 275
           ACGVRYKSGRLVPEYRPA+SPTF+AELHSNSHRK++EMR+Q Q G
Sbjct: 245 ACGVRYKSGRLVPEYRPANSPTFTAELHSNSHRKIVEMRKQYQSG 264

[Close]

BLAST of HG10010087 vs. ExPASy Swiss-Prot
Match: O82632 (GATA transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=GATA9 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 3.6e-32
Identity = 110/279 (39.43%), Postives = 138/279 (49.46%), Query Frame = 0


Query: 8   MDDLLDFSSDIGEEDEEDDVVPPFSVKPKSSSTTAADSSELNAAMHPDDSSSCRVLPEED 67
           +DDLLDFS+D GE D+  + +P  S     S+ T  DSS  ++        S   +P +D
Sbjct: 20  VDDLLDFSNDDGEVDDGLNTLPDSST---LSTGTLTDSSNSSSLFTDGTGFSDLYIPNDD 79

Query: 68  YGEEELEWLSN--EDAFPAVETFVDILSDHHHHAPPPPPLTSVSKQNSPVSVLESTSISS 127
               ELEWLSN  E++F   +   D L        P    ++++    P   L+   I  
Sbjct: 80  IA--ELEWLSNFVEESFAGEDQ--DKLHLFSGLKNPQTTGSTLTHLIKPEPELDHQFIDI 139

Query: 128 HGETNNSGNKTSLHGSSILMSCCDGLKVPGKARSKRRRGRHISGHHLWFKQQPSSKNVKQ 187
             E+N                    + VP KARSKR R    S    W  +  S  +  +
Sbjct: 140 -DESN--------------------VAVPAKARSKRSR----SAASTWASRLLSLADSDE 199

Query: 188 VVPT-----------TATAAAVTATAAIGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVR 247
             P                      +  GR+CLHC  EKTPQWR GP GPKTLCNACGVR
Sbjct: 200 TNPKKKQRRVKEQDFAGDMDVDCGESGGGRRCLHCATEKTPQWRTGPMGPKTLCNACGVR 259

Query: 248 YKSGRLVPEYRPASSPTFSAELHSNSHRKVMEMRRQKQL 274
           YKSGRLVPEYRPASSPTF    HSNSHRKVME+RRQK++
Sbjct: 260 YKSGRLVPEYRPASSPTFVMARHSNSHRKVMELRRQKEM 266

[Close]

BLAST of HG10010087 vs. ExPASy Swiss-Prot
Match: Q9SD38 (GATA transcription factor 6 OS=Arabidopsis thaliana OX=3702 GN=GATA6 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.2e-30
Identity = 106/278 (38.13%), Postives = 136/278 (48.92%), Query Frame = 0


Query: 8   MDDLLDFSSDIGEEDEEDDVVPPFSVKPK-------SSSTTAADSSELNAAMHPDDSSSC 67
           +DDLLDFS    +E+E+DDV+     + K       S   T   S++ + A   D  +S 
Sbjct: 30  VDDLLDFS----KEEEDDDVLVEDEAELKVQRKRGVSDENTLHRSNDFSTA---DFHTSG 89

Query: 68  RVLPEEDYGEEELEWLSNEDAFPAVETFVDILSDHHHHAPPPPPLTSVSKQNSPVS-VLE 127
             +P +D    ELEWLSN         FVD  S   + AP   P+     +   V  V E
Sbjct: 90  LSVPMDDIA--ELEWLSN---------FVDDSSFTPYSAPTNKPVWLTGNRRHLVQPVKE 149

Query: 128 STSISSHGETNNSGNKTSLHGSSILMSCCDGLKVPGKARSKRRRGRHISGHHLW-----F 187
            T   S      +  K +  G  +       L     + +            LW     F
Sbjct: 150 ETCFKSQHPAVKTRPKRARTGVRVWSHGSQSLTDSSSSSTTSSSSSPRPSSPLWLASGQF 209

Query: 188 KQQPSSKNVKQVVPTTATAAAVTATAAIGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVR 247
             +P +K  K+           T T    R+C HCG +KTPQWRAGP G KTLCNACGVR
Sbjct: 210 LDEPMTKTQKKKKVWKNAGQTQTQTQTQTRQCGHCGVQKTPQWRAGPLGAKTLCNACGVR 269

Query: 248 YKSGRLVPEYRPASSPTFSAELHSNSHRKVMEMRRQKQ 273
           YKSGRL+PEYRPA SPTFS+ELHSN H KV+EMRR+K+
Sbjct: 270 YKSGRLLPEYRPACSPTFSSELHSNHHSKVIEMRRKKE 289

[Close]

BLAST of HG10010087 vs. ExPASy Swiss-Prot
Match: P69781 (GATA transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=GATA12 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.5e-30
Identity = 117/315 (37.14%), Postives = 148/315 (46.98%), Query Frame = 0


Query: 3   SSLAFMDDLLDFSSDIGEEDEEDDVVPPFSVKPKSSSTTAADSSELNAA----MHPD--- 62
           S  A  D L+DFS+D   +DEE+DV     V   +++TT  DSS  +AA     H D   
Sbjct: 12  SDFAVDDLLVDFSND---DDEENDV-----VADSTTTTTITDSSNFSAADLPSFHGDVQD 71

Query: 63  --DSSSCRVLPEEDYGEEELEWLSN---EDAFPAVETFVDILSDHHHHAPPPPPLTSVSK 122
               S    +P +D   +ELEWLSN   E   P     ++++S       P     S   
Sbjct: 72  GTSFSGDLCIPSDDLA-DELEWLSNIVDESLSPEDVHKLELISGFKSRPDPKSDTGSPEN 131

Query: 123 QNSPVSVLESTSISSHGETNNSGNKTSLHGSSILMSCCDGLKVPGKARSKRRRG------ 182
            NS  S + +T +S                            VP KARSKR R       
Sbjct: 132 PNSS-SPIFTTDVS----------------------------VPAKARSKRSRAAACNWA 191

Query: 183 -----------RHISGHHLWFKQQ----PSSKNV-------KQVVP----TTATAAAVTA 242
                         +G  +   QQ    P+S  +       KQ V          ++  +
Sbjct: 192 SRGLLKETFYDSPFTGETILSSQQHLSPPTSPPLLMAPLGKKQAVDGGHRRKKDVSSPES 251

Query: 243 TAAIGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVRYKSGRLVPEYRPASSPTFSAELHS 274
             A  R+CLHC  +KTPQWR GP GPKTLCNACGVRYKSGRLVPEYRPA+SPTF    HS
Sbjct: 252 GGAEERRCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLAKHS 288

[Close]

BLAST of HG10010087 vs. ExPASy Swiss-Prot
Match: Q9FH57 (GATA transcription factor 5 OS=Arabidopsis thaliana OX=3702 GN=GATA5 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.2e-27
Identity = 103/285 (36.14%), Postives = 134/285 (47.02%), Query Frame = 0


Query: 8   MDDLLDFSSDIGEEDEEDDVVPPFSVKPKSSSTTAADSSELNAAMHPDDSSSC------- 67
           +DDLLD S+D    DEE D+     +   SS     D   L  +    D S C       
Sbjct: 43  VDDLLDLSNDDVFADEETDLKAQHEMVRVSSEEPNDDGDALRRS---SDFSGCDDFGSLP 102

Query: 68  ---RVLPEEDYGEEELEWLSNEDAFPAVETFVDILSDHHHHAPPPPPLTSVSKQNSPV-S 127
                LP +D     LEWLS+       ++F +    +    P   P      +  PV +
Sbjct: 103 TSELSLPADDLA--NLEWLSHF----VEDSFTEYSGPNLTGTPTEKPAWLTGDRKHPVTA 162

Query: 128 VLESTSISS--HGETNNSGNKTSLHGSSILMSCCDGLKVPGKARSKRR-------RGRHI 187
           V E T   S    +  +  N+  L   S+  S   G    G   S           G  +
Sbjct: 163 VTEETCFKSPVPAKARSKRNRNGLKVWSLGSSSSSGPSSSGSTSSSSSGPSSPWFSGAEL 222

Query: 188 SGHHLWFKQQPSSKNVKQVVPTTATAAAVTATAAIGRKCLHCGAEKTPQWRAGPFGPKTL 247
               +  ++ P  K  K+    +  +  +       RKC HCG +KTPQWRAGP G KTL
Sbjct: 223 LEPVVTSERPPFPKKHKKRSAESVFSGELQQLQP-QRKCSHCGVQKTPQWRAGPMGAKTL 282

Query: 248 CNACGVRYKSGRLVPEYRPASSPTFSAELHSNSHRKVMEMRRQKQ 273
           CNACGVRYKSGRL+PEYRPA SPTFS+ELHSN HRKV+EMRR+K+
Sbjct: 283 CNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHRKVIEMRRKKE 317

[Close]

BLAST of HG10010087 vs. ExPASy TrEMBL
Match: A0A1S3CCM6 (GATA transcription factor OS=Cucumis melo OX=3656 GN=LOC103499483 PE=3 SV=1)

HSP 1 Score: 518.8 bits (1335), Expect = 1.4e-143
Identity = 267/288 (92.71%), Postives = 272/288 (94.44%), Query Frame = 0


Query: 1   MESSLAFMDDLLDFSSDIGEEDEEDDVVPPFSVKPKSSSTTAADSSELN-AAMHPDDSSS 60
           MESSLAFMDDLLDFSSDIGEEDEEDD VPPFSVK KSSSTTA DSS+LN AAMHPDDSSS
Sbjct: 1   MESSLAFMDDLLDFSSDIGEEDEEDDAVPPFSVKSKSSSTTAPDSSDLNAAAMHPDDSSS 60

Query: 61  CRVLPEEDYGEEELEWLSNEDAFPAVETFVDILSD-HHHHAPPPPPLTSVSKQNSPVSVL 120
           CRVLPEEDY EEELEWLSNEDAFPAVETFVDILSD HHHHAP PPPLTSVSKQNSPVSVL
Sbjct: 61  CRVLPEEDYAEEELEWLSNEDAFPAVETFVDILSDHHHHHAPQPPPLTSVSKQNSPVSVL 120

Query: 121 ESTSISSHGETNNSGNKTSLHGSSILMSCCDGLKVPGKARSKRRRGRHISGHHLWFKQQP 180
           ESTSISSHGET N GNKTS+HGSSILMSCC GLKVPGKARSKRRRGRHISGHHLWFKQQP
Sbjct: 121 ESTSISSHGETINGGNKTSVHGSSILMSCCGGLKVPGKARSKRRRGRHISGHHLWFKQQP 180

Query: 181 SSKNVKQVVPTTATAAAVTAT---AAIGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVRY 240
           SSKN+KQVVPTT TAAAV AT   A IGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVR+
Sbjct: 181 SSKNLKQVVPTTETAAAVAATTGAAGIGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVRF 240

Query: 241 KSGRLVPEYRPASSPTFSAELHSNSHRKVMEMRRQKQLGMVVNPMDKG 284
           KSGRLVPEYRPASSPTFSA+LHSNSHRKVMEMRRQKQLGMVVNPMDKG
Sbjct: 241 KSGRLVPEYRPASSPTFSADLHSNSHRKVMEMRRQKQLGMVVNPMDKG 288

[Close]

BLAST of HG10010087 vs. ExPASy TrEMBL
Match: A0A5A7SR13 (GATA transcription factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold134G00820 PE=3 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 7.1e-140
Identity = 260/281 (92.53%), Postives = 265/281 (94.31%), Query Frame = 0


Query: 8   MDDLLDFSSDIGEEDEEDDVVPPFSVKPKSSSTTAADSSELN-AAMHPDDSSSCRVLPEE 67
           MDDLLDFSSDIGEEDEEDD VPPFSVK KSSSTTA DSS+LN AAMHPDDSSSCRVLPEE
Sbjct: 1   MDDLLDFSSDIGEEDEEDDAVPPFSVKSKSSSTTAPDSSDLNAAAMHPDDSSSCRVLPEE 60

Query: 68  DYGEEELEWLSNEDAFPAVETFVDILSD-HHHHAPPPPPLTSVSKQNSPVSVLESTSISS 127
           DY EEELEWLSNEDAFPAVETFVDILSD HHHHAP PPPLTSVSKQNSPVSVLESTSISS
Sbjct: 61  DYAEEELEWLSNEDAFPAVETFVDILSDHHHHHAPQPPPLTSVSKQNSPVSVLESTSISS 120

Query: 128 HGETNNSGNKTSLHGSSILMSCCDGLKVPGKARSKRRRGRHISGHHLWFKQQPSSKNVKQ 187
           HGET N GNKTS+HGSSILMSCC GLKVPGKARSKRRRGRHISGHHLWFKQQPSSKN+KQ
Sbjct: 121 HGETINGGNKTSVHGSSILMSCCGGLKVPGKARSKRRRGRHISGHHLWFKQQPSSKNLKQ 180

Query: 188 VVPTTATAAAVTAT---AAIGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVRYKSGRLVP 247
           VVPTT TAAAV AT   A IGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVR+KSGRLVP
Sbjct: 181 VVPTTETAAAVAATTGAAGIGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVRFKSGRLVP 240

Query: 248 EYRPASSPTFSAELHSNSHRKVMEMRRQKQLGMVVNPMDKG 284
           EYRPASSPTFSA+LHSNSHRKVMEMRRQKQLGMVVNPMDKG
Sbjct: 241 EYRPASSPTFSADLHSNSHRKVMEMRRQKQLGMVVNPMDKG 281

[Close]

BLAST of HG10010087 vs. ExPASy TrEMBL
Match: A0A0A0LKH9 (GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G162660 PE=4 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 3.5e-139
Identity = 263/288 (91.32%), Postives = 267/288 (92.71%), Query Frame = 0


Query: 1   MESSLAFMDDLLDFSSDIGEEDEEDDVVPPFSVKPKSSSTTAADSSELN-AAMHPDDSSS 60
           MESSLAFMDDLLDFSSDIGEEDEEDD VPPFSVKPKSSSTTA DSS+LN AAMHPDDSSS
Sbjct: 1   MESSLAFMDDLLDFSSDIGEEDEEDDAVPPFSVKPKSSSTTAPDSSDLNAAAMHPDDSSS 60

Query: 61  CRVLPEEDYGEEELEWLSNEDAFPAVETFVDILSD-HHHHAPPPPPLTSVSKQNSPVSVL 120
           CRVLPEE Y EEELEWLSNEDAFPAVETFVDILSD HHHHAP PPPL SVSKQNSPVSVL
Sbjct: 61  CRVLPEE-YAEEELEWLSNEDAFPAVETFVDILSDHHHHHAPQPPPLPSVSKQNSPVSVL 120

Query: 121 ESTSISSHGETNNSGNKTSLHGSSILMSCCDGLKVPGKARSKRRRGRHISGHHLWFKQQP 180
           ESTSISSHGET N GNKTS+H SSILMSCC  LKVP KARSKRRRGRHISGHHL FKQQP
Sbjct: 121 ESTSISSHGETTNGGNKTSVHSSSILMSCCGSLKVPSKARSKRRRGRHISGHHLLFKQQP 180

Query: 181 SSKNVKQVVPTTATA---AAVTATAAIGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVRY 240
           SSKN+KQVVPTTATA   AA T TA IGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVR+
Sbjct: 181 SSKNLKQVVPTTATAAVVAATTGTAGIGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVRF 240

Query: 241 KSGRLVPEYRPASSPTFSAELHSNSHRKVMEMRRQKQLGMVVNPMDKG 284
           KSGRLVPEYRPASSPTFSAELHSNSHRKVMEMRRQKQLGMVVNPMDKG
Sbjct: 241 KSGRLVPEYRPASSPTFSAELHSNSHRKVMEMRRQKQLGMVVNPMDKG 287

[Close]

BLAST of HG10010087 vs. ExPASy TrEMBL
Match: A0A6J1KXF9 (GATA transcription factor OS=Cucurbita maxima OX=3661 GN=LOC111499085 PE=3 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.4e-127
Identity = 244/288 (84.72%), Postives = 253/288 (87.85%), Query Frame = 0


Query: 1   MESSLAFMDDLLDFSSDIGEEDEEDDVVPPFSVKPKSSSTTAADSSELNAAMHPDDSSSC 60
           MESSLAFMDDLLDFSSDIG EDEEDD VPPFSVKPK+++ T  DSSE NA  HP+DSSSC
Sbjct: 1   MESSLAFMDDLLDFSSDIGGEDEEDDAVPPFSVKPKAAAVT--DSSEFNAGFHPEDSSSC 60

Query: 61  RVLPEEDYGEEELEWLSNEDAFPAVETFVDILSDHHHHAPPPPPLTSVSKQNSPVSVLES 120
           RVLPEEDY EEELEWLSNED FPAVETFVDILSDHHH  P PP L SVSKQNSPVSVLE+
Sbjct: 61  RVLPEEDYAEEELEWLSNEDVFPAVETFVDILSDHHH--PQPPSLMSVSKQNSPVSVLET 120

Query: 121 TSISSHGETNNSGNKTSLHGSSILMSCCDGLKVPGKARSKRRRGRHISGHHLWFKQQPSS 180
           TSISSHG     GNK S HG SILMSCCDGLKVPGKARSKRRRGRHISGHHLWFKQQPSS
Sbjct: 121 TSISSHG-----GNKPSAHG-SILMSCCDGLKVPGKARSKRRRGRHISGHHLWFKQQPSS 180

Query: 181 KNVKQVVP----TTATAAAV-TATAAIGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVRY 240
           +NVKQ++P    T  TAAAV TA   IGRKCLHCGAEKTPQWRAGP+GPKTLCNACGVRY
Sbjct: 181 RNVKQILPITIATATTAAAVTTAKTPIGRKCLHCGAEKTPQWRAGPYGPKTLCNACGVRY 240

Query: 241 KSGRLVPEYRPASSPTFSAELHSNSHRKVMEMRRQKQLGMVVNPMDKG 284
           KSGRLVPEYRPASSPTFS ELHSNSHRKVMEMRRQKQ GMVVNPMDKG
Sbjct: 241 KSGRLVPEYRPASSPTFSPELHSNSHRKVMEMRRQKQFGMVVNPMDKG 278

[Close]

BLAST of HG10010087 vs. ExPASy TrEMBL
Match: A0A6J1H6G5 (GATA transcription factor OS=Cucurbita moschata OX=3662 GN=LOC111460465 PE=3 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 5.8e-126
Identity = 242/288 (84.03%), Postives = 249/288 (86.46%), Query Frame = 0


Query: 1   MESSLAFMDDLLDFSSDIGEEDEEDDVVPPFSVKPKSSSTTAADSSELNAAMHPDDSSSC 60
           MESSLAFMDDLLDFSSDIG EDEEDD VPPFSVKPK+    A DSSE NA  HP+DSSSC
Sbjct: 1   MESSLAFMDDLLDFSSDIGGEDEEDDAVPPFSVKPKA----ATDSSEFNAGFHPEDSSSC 60

Query: 61  RVLPEEDYGEEELEWLSNEDAFPAVETFVDILSDHHHHAPPPPPLTSVSKQNSPVSVLES 120
           RVLP EDY EEELEWLSNED FPAVETFVDILSDHHH  P PP L SVSKQNSPVSVLE+
Sbjct: 61  RVLP-EDYAEEELEWLSNEDVFPAVETFVDILSDHHHDHPQPPSLMSVSKQNSPVSVLET 120

Query: 121 TSISSHGETNNSGNKTSLHGSSILMSCCDGLKVPGKARSKRRRGRHISGHHLWFKQQPSS 180
           TSISSHG     GNK S HG SILMSCCDGLKVPGKARSKRRR RH+SGHHLWFKQQPSS
Sbjct: 121 TSISSHG-----GNKPSAHG-SILMSCCDGLKVPGKARSKRRRSRHVSGHHLWFKQQPSS 180

Query: 181 KNVKQVVP-TTAT----AAAVTATAAIGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVRY 240
           +NVKQ+ P TTAT    AA  TA  AIGRKCLHCGAEKTPQWRAGP+GPKTLCNACGVRY
Sbjct: 181 RNVKQIQPITTATATTAAAVTTAKTAIGRKCLHCGAEKTPQWRAGPYGPKTLCNACGVRY 240

Query: 241 KSGRLVPEYRPASSPTFSAELHSNSHRKVMEMRRQKQLGMVVNPMDKG 284
           KSGRLVPEYRPASSPTFS ELHSNSHRKVMEMRRQKQ GMVVNPMDKG
Sbjct: 241 KSGRLVPEYRPASSPTFSPELHSNSHRKVMEMRRQKQFGMVVNPMDKG 277

[Close]

BLAST of HG10010087 vs. TAIR 10
Match: AT3G24050.1 (GATA transcription factor 1 )

HSP 1 Score: 222.6 bits (566), Expect = 3.9e-58
Identity = 139/285 (48.77%), Postives = 174/285 (61.05%), Query Frame = 0


Query: 6   AFMDDLLDFSSDIGEEDEEDDVVPPFSVKPKSSSTTAADSSELNAAMHPDDSSSCRVLPE 65
           +FMDDLL+FS    EED+++   PP ++  + +     DS  L    + DD         
Sbjct: 5   SFMDDLLNFSVPEEEEDDDEHTQPPRNITRRKTGLRPTDSFGL---FNTDDLGVVE---- 64

Query: 66  EDYGEEELEWLSNEDAFPAVETFVDILSDHHHHAPPPPPLTSV-------SKQNSPVSVL 125
               EE+LEW+SN++AFP +ETFV +L   H       P+TS+        KQ SPVSVL
Sbjct: 65  ----EEDLEWISNKNAFPVIETFVGVLPSEHF------PITSLLEREATEVKQLSPVSVL 124

Query: 126 ESTSISSHGETNNSGNKTSLHGSS---------ILMSCCDGLKVPGKARSKRRRGRHISG 185
           E++S SS   T+NS   +  +GS+          +MSCC G K P KARSKRRR      
Sbjct: 125 ETSSHSSTTTTSNSSGGS--NGSTAVATTTTTPTIMSCCVGFKAPAKARSKRRRTGRRDL 184

Query: 186 HHLWFKQQPSSKNVKQVVPTTATAAAVTATAAIGRKCLHCGAEKTPQWRAGPFGPKTLCN 245
             LW   +      K+ + T A AA +     +GRKC HCGAEKTPQWRAGP GPKTLCN
Sbjct: 185 RVLWTGNEQGGIQKKKTM-TVAAAALI-----MGRKCQHCGAEKTPQWRAGPAGPKTLCN 244

Query: 246 ACGVRYKSGRLVPEYRPASSPTFSAELHSNSHRKVMEMRRQKQLG 275
           ACGVRYKSGRLVPEYRPA+SPTF+AELHSNSHRK++EMR+Q Q G
Sbjct: 245 ACGVRYKSGRLVPEYRPANSPTFTAELHSNSHRKIVEMRKQYQSG 264

[Close]

BLAST of HG10010087 vs. TAIR 10
Match: AT4G32890.1 (GATA transcription factor 9 )

HSP 1 Score: 140.2 bits (352), Expect = 2.6e-33
Identity = 110/279 (39.43%), Postives = 138/279 (49.46%), Query Frame = 0


Query: 8   MDDLLDFSSDIGEEDEEDDVVPPFSVKPKSSSTTAADSSELNAAMHPDDSSSCRVLPEED 67
           +DDLLDFS+D GE D+  + +P  S     S+ T  DSS  ++        S   +P +D
Sbjct: 20  VDDLLDFSNDDGEVDDGLNTLPDSST---LSTGTLTDSSNSSSLFTDGTGFSDLYIPNDD 79

Query: 68  YGEEELEWLSN--EDAFPAVETFVDILSDHHHHAPPPPPLTSVSKQNSPVSVLESTSISS 127
               ELEWLSN  E++F   +   D L        P    ++++    P   L+   I  
Sbjct: 80  IA--ELEWLSNFVEESFAGEDQ--DKLHLFSGLKNPQTTGSTLTHLIKPEPELDHQFIDI 139

Query: 128 HGETNNSGNKTSLHGSSILMSCCDGLKVPGKARSKRRRGRHISGHHLWFKQQPSSKNVKQ 187
             E+N                    + VP KARSKR R    S    W  +  S  +  +
Sbjct: 140 -DESN--------------------VAVPAKARSKRSR----SAASTWASRLLSLADSDE 199

Query: 188 VVPT-----------TATAAAVTATAAIGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVR 247
             P                      +  GR+CLHC  EKTPQWR GP GPKTLCNACGVR
Sbjct: 200 TNPKKKQRRVKEQDFAGDMDVDCGESGGGRRCLHCATEKTPQWRTGPMGPKTLCNACGVR 259

Query: 248 YKSGRLVPEYRPASSPTFSAELHSNSHRKVMEMRRQKQL 274
           YKSGRLVPEYRPASSPTF    HSNSHRKVME+RRQK++
Sbjct: 260 YKSGRLVPEYRPASSPTFVMARHSNSHRKVMELRRQKEM 266

[Close]

BLAST of HG10010087 vs. TAIR 10
Match: AT3G51080.1 (GATA transcription factor 6 )

HSP 1 Score: 135.2 bits (339), Expect = 8.2e-32
Identity = 106/278 (38.13%), Postives = 136/278 (48.92%), Query Frame = 0


Query: 8   MDDLLDFSSDIGEEDEEDDVVPPFSVKPK-------SSSTTAADSSELNAAMHPDDSSSC 67
           +DDLLDFS    +E+E+DDV+     + K       S   T   S++ + A   D  +S 
Sbjct: 30  VDDLLDFS----KEEEDDDVLVEDEAELKVQRKRGVSDENTLHRSNDFSTA---DFHTSG 89

Query: 68  RVLPEEDYGEEELEWLSNEDAFPAVETFVDILSDHHHHAPPPPPLTSVSKQNSPVS-VLE 127
             +P +D    ELEWLSN         FVD  S   + AP   P+     +   V  V E
Sbjct: 90  LSVPMDDIA--ELEWLSN---------FVDDSSFTPYSAPTNKPVWLTGNRRHLVQPVKE 149

Query: 128 STSISSHGETNNSGNKTSLHGSSILMSCCDGLKVPGKARSKRRRGRHISGHHLW-----F 187
            T   S      +  K +  G  +       L     + +            LW     F
Sbjct: 150 ETCFKSQHPAVKTRPKRARTGVRVWSHGSQSLTDSSSSSTTSSSSSPRPSSPLWLASGQF 209

Query: 188 KQQPSSKNVKQVVPTTATAAAVTATAAIGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVR 247
             +P +K  K+           T T    R+C HCG +KTPQWRAGP G KTLCNACGVR
Sbjct: 210 LDEPMTKTQKKKKVWKNAGQTQTQTQTQTRQCGHCGVQKTPQWRAGPLGAKTLCNACGVR 269

Query: 248 YKSGRLVPEYRPASSPTFSAELHSNSHRKVMEMRRQKQ 273
           YKSGRL+PEYRPA SPTFS+ELHSN H KV+EMRR+K+
Sbjct: 270 YKSGRLLPEYRPACSPTFSSELHSNHHSKVIEMRRKKE 289

[Close]

BLAST of HG10010087 vs. TAIR 10
Match: AT5G25830.1 (GATA transcription factor 12 )

HSP 1 Score: 134.8 bits (338), Expect = 1.1e-31
Identity = 117/315 (37.14%), Postives = 148/315 (46.98%), Query Frame = 0


Query: 3   SSLAFMDDLLDFSSDIGEEDEEDDVVPPFSVKPKSSSTTAADSSELNAA----MHPD--- 62
           S  A  D L+DFS+D   +DEE+DV     V   +++TT  DSS  +AA     H D   
Sbjct: 12  SDFAVDDLLVDFSND---DDEENDV-----VADSTTTTTITDSSNFSAADLPSFHGDVQD 71

Query: 63  --DSSSCRVLPEEDYGEEELEWLSN---EDAFPAVETFVDILSDHHHHAPPPPPLTSVSK 122
               S    +P +D   +ELEWLSN   E   P     ++++S       P     S   
Sbjct: 72  GTSFSGDLCIPSDDLA-DELEWLSNIVDESLSPEDVHKLELISGFKSRPDPKSDTGSPEN 131

Query: 123 QNSPVSVLESTSISSHGETNNSGNKTSLHGSSILMSCCDGLKVPGKARSKRRRG------ 182
            NS  S + +T +S                            VP KARSKR R       
Sbjct: 132 PNSS-SPIFTTDVS----------------------------VPAKARSKRSRAAACNWA 191

Query: 183 -----------RHISGHHLWFKQQ----PSSKNV-------KQVVP----TTATAAAVTA 242
                         +G  +   QQ    P+S  +       KQ V          ++  +
Sbjct: 192 SRGLLKETFYDSPFTGETILSSQQHLSPPTSPPLLMAPLGKKQAVDGGHRRKKDVSSPES 251

Query: 243 TAAIGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVRYKSGRLVPEYRPASSPTFSAELHS 274
             A  R+CLHC  +KTPQWR GP GPKTLCNACGVRYKSGRLVPEYRPA+SPTF    HS
Sbjct: 252 GGAEERRCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLAKHS 288

[Close]

BLAST of HG10010087 vs. TAIR 10
Match: AT5G66320.1 (GATA transcription factor 5 )

HSP 1 Score: 125.2 bits (313), Expect = 8.5e-29
Identity = 103/285 (36.14%), Postives = 134/285 (47.02%), Query Frame = 0


Query: 8   MDDLLDFSSDIGEEDEEDDVVPPFSVKPKSSSTTAADSSELNAAMHPDDSSSC------- 67
           +DDLLD S+D    DEE D+     +   SS     D   L  +    D S C       
Sbjct: 43  VDDLLDLSNDDVFADEETDLKAQHEMVRVSSEEPNDDGDALRRS---SDFSGCDDFGSLP 102

Query: 68  ---RVLPEEDYGEEELEWLSNEDAFPAVETFVDILSDHHHHAPPPPPLTSVSKQNSPV-S 127
                LP +D     LEWLS+       ++F +    +    P   P      +  PV +
Sbjct: 103 TSELSLPADDLA--NLEWLSHF----VEDSFTEYSGPNLTGTPTEKPAWLTGDRKHPVTA 162

Query: 128 VLESTSISS--HGETNNSGNKTSLHGSSILMSCCDGLKVPGKARSKRR-------RGRHI 187
           V E T   S    +  +  N+  L   S+  S   G    G   S           G  +
Sbjct: 163 VTEETCFKSPVPAKARSKRNRNGLKVWSLGSSSSSGPSSSGSTSSSSSGPSSPWFSGAEL 222

Query: 188 SGHHLWFKQQPSSKNVKQVVPTTATAAAVTATAAIGRKCLHCGAEKTPQWRAGPFGPKTL 247
               +  ++ P  K  K+    +  +  +       RKC HCG +KTPQWRAGP G KTL
Sbjct: 223 LEPVVTSERPPFPKKHKKRSAESVFSGELQQLQP-QRKCSHCGVQKTPQWRAGPMGAKTL 282

Query: 248 CNACGVRYKSGRLVPEYRPASSPTFSAELHSNSHRKVMEMRRQKQ 273
           CNACGVRYKSGRL+PEYRPA SPTFS+ELHSN HRKV+EMRR+K+
Sbjct: 283 CNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHRKVIEMRRKKE 317

The following BLAST results are available for this feature:

BLAST of HG10010087 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875635.1	5.5e-147	96.15	GATA transcription factor 1 [Benincasa hispida]	[more]
XP_008460721.1	2.8e-143	92.71	PREDICTED: GATA transcription factor 1 [Cucumis melo]	[more]
KAA0031991.1	1.5e-139	92.53	GATA transcription factor 1 [Cucumis melo var. makuwa]	[more]
XP_004150343.1	7.3e-139	91.32	GATA transcription factor 1 [Cucumis sativus] >KGN61534.1 hypothetical protein C...	[more]
KAG7013448.1	1.0e-129	84.14	GATA transcription factor 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of HG10010087 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LAU9	5.5e-57	48.77	GATA transcription factor 1 OS=Arabidopsis thaliana OX=3702 GN=GATA1 PE=2 SV=2	[more]
O82632	3.6e-32	39.43	GATA transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=GATA9 PE=2 SV=1	[more]
Q9SD38	1.2e-30	38.13	GATA transcription factor 6 OS=Arabidopsis thaliana OX=3702 GN=GATA6 PE=2 SV=1	[more]
P69781	1.5e-30	37.14	GATA transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=GATA12 PE=2 SV=1	[more]
Q9FH57	1.2e-27	36.14	GATA transcription factor 5 OS=Arabidopsis thaliana OX=3702 GN=GATA5 PE=2 SV=1	[more]

BLAST of HG10010087 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CCM6	1.4e-143	92.71	GATA transcription factor OS=Cucumis melo OX=3656 GN=LOC103499483 PE=3 SV=1	[more]
A0A5A7SR13	7.1e-140	92.53	GATA transcription factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A0A0LKH9	3.5e-139	91.32	GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G162660 P...	[more]
A0A6J1KXF9	1.4e-127	84.72	GATA transcription factor OS=Cucurbita maxima OX=3661 GN=LOC111499085 PE=3 SV=1	[more]
A0A6J1H6G5	5.8e-126	84.03	GATA transcription factor OS=Cucurbita moschata OX=3662 GN=LOC111460465 PE=3 SV=...	[more]

BLAST of HG10010087 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24050.1	3.9e-58	48.77	GATA transcription factor 1	[more]
AT4G32890.1	2.6e-33	39.43	GATA transcription factor 9	[more]
AT3G51080.1	8.2e-32	38.13	GATA transcription factor 6	[more]
AT5G25830.1	1.1e-31	37.14	GATA transcription factor 12	[more]
AT5G66320.1	8.5e-29	36.14	GATA transcription factor 5	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 200..250 e-value: 4.4E-16 score: 69.4
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 206..239 e-value: 1.1E-15 score: 56.9
IPR000679	Zinc finger, GATA-type	PROSITE	PS00344	GATA_ZN_FINGER_1	coord: 206..231
IPR000679	Zinc finger, GATA-type	PROSITE	PS50114	GATA_ZN_FINGER_2	coord: 200..236 score: 11.978056
IPR000679	Zinc finger, GATA-type	CDD	cd00202	ZnF_GATA	coord: 205..253 e-value: 1.43257E-13 score: 62.005
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	3.30.50.10		coord: 200..251 e-value: 6.1E-16 score: 59.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..136
None	No IPR available	PANTHER	PTHR45658:SF42	GATA TRANSCRIPTION FACTOR 1	coord: 8..272
None	No IPR available	PANTHER	PTHR45658	GATA TRANSCRIPTION FACTOR	coord: 8..272
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 202..264

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10010087.1	HG10010087.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation
biological_process	GO:0007623	circadian rhythm
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000976	transcription cis-regulatory region binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0043565	sequence-specific DNA binding