HG10010016 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10010016
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Unknown protein
Location	Chr06: 17028315 .. 17028587 (+)
RNA-Seq Expression	HG10010016
Synteny	HG10010016

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAAGGTATCGTGTGGGCAACAGCAGAGGATTTAGCGAGGAACCGTGGGCGTGTTCTGTCTCTTTATCGCCAGATATTGCGGAGCCTCAACTCCCCAAATTTGCCTCTCAGCTTCGCAGCTAGATTAGCAAAGAAGGCGGAGGTTCGTGGCATTTTCTTGCTTGCTTCTGAAGAGCGATCTCTTCACAATATTGAAGACCTTATTGATACTGCTGAGTACTCCCTTTCCCTTTTAAGGAAGGGAGAAATTCCCAAATATATTCAATGA

mRNA sequence

ATGGCGAAAGGTATCGTGTGGGCAACAGCAGAGGATTTAGCGAGGAACCGTGGGCGTGTTCTGTCTCTTTATCGCCAGATATTGCGGAGCCTCAACTCCCCAAATTTGCCTCTCAGCTTCGCAGCTAGATTAGCAAAGAAGGCGGAGGTTCGTGGCATTTTCTTGCTTGCTTCTGAAGAGCGATCTCTTCACAATATTGAAGACCTTATTGATACTGCTGAGTACTCCCTTTCCCTTTTAAGGAAGGGAGAAATTCCCAAATATATTCAATGA

Coding sequence (CDS)

ATGGCGAAAGGTATCGTGTGGGCAACAGCAGAGGATTTAGCGAGGAACCGTGGGCGTGTTCTGTCTCTTTATCGCCAGATATTGCGGAGCCTCAACTCCCCAAATTTGCCTCTCAGCTTCGCAGCTAGATTAGCAAAGAAGGCGGAGGTTCGTGGCATTTTCTTGCTTGCTTCTGAAGAGCGATCTCTTCACAATATTGAAGACCTTATTGATACTGCTGAGTACTCCCTTTCCCTTTTAAGGAAGGGAGAAATTCCCAAATATATTCAATGA

Protein sequence

MAKGIVWATAEDLARNRGRVLSLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEERSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ

Homology

[Close]

BLAST of HG10010016 vs. NCBI nr
Match: XP_038874375.1 (uncharacterized protein LOC120067065 [Benincasa hispida] >XP_038874376.1 uncharacterized protein LOC120067065 [Benincasa hispida] >XP_038874377.1 uncharacterized protein LOC120067065 [Benincasa hispida])

HSP 1 Score: 173.7 bits (439), Expect = 7.1e-40
Identity = 89/90 (98.89%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MAKGIVWATAEDLARNRGRVLSLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 60
          MAKGIVWATAEDLARNRGRV+SLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE
Sbjct: 1  MAKGIVWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 60

Query: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 91
          RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ
Sbjct: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]

BLAST of HG10010016 vs. NCBI nr
Match: KAG7013408.1 (putative acyl-activating enzyme 19, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 173.3 bits (438), Expect = 9.3e-40
Identity = 88/90 (97.78%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1   MAKGIVWATAEDLARNRGRVLSLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 60
           MAKGI+WATAEDLARNRGRV+SLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE
Sbjct: 129 MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 188

Query: 61  RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 91
           RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ
Sbjct: 189 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 218

[Close]

BLAST of HG10010016 vs. NCBI nr
Match: XP_022958896.1 (uncharacterized protein LOC111460046 [Cucurbita moschata])

HSP 1 Score: 173.3 bits (438), Expect = 9.3e-40
Identity = 88/90 (97.78%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MAKGIVWATAEDLARNRGRVLSLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 60
          MAKGI+WATAEDLARNRGRV+SLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE
Sbjct: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 60

Query: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 91
          RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ
Sbjct: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]

BLAST of HG10010016 vs. NCBI nr
Match: XP_023547728.1 (uncharacterized protein LOC111806583 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 172.2 bits (435), Expect = 2.1e-39
Identity = 87/90 (96.67%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MAKGIVWATAEDLARNRGRVLSLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 60
          MAKGI+WATAEDLARNRGRV+SLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASE+
Sbjct: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASED 60

Query: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 91
          RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ
Sbjct: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]

BLAST of HG10010016 vs. NCBI nr
Match: XP_008457166.1 (PREDICTED: uncharacterized protein LOC103496906 [Cucumis melo] >XP_031736881.1 uncharacterized protein LOC101207229 [Cucumis sativus] >KAA0039619.1 uncharacterized protein E6C27_scaffold744G00990 [Cucumis melo var. makuwa] >TYK01687.1 uncharacterized protein E5676_scaffold775G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 170.2 bits (430), Expect = 7.9e-39
Identity = 86/90 (95.56%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  MAKGIVWATAEDLARNRGRVLSLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 60
          MAKGI+WATAEDLARNRGRV+SLYRQILRSLNSPNLPLSFAARLAKKAEVR IF+LASEE
Sbjct: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEE 60

Query: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 91
          RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ
Sbjct: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]

BLAST of HG10010016 vs. ExPASy TrEMBL
Match: A0A6J1H3E8 (uncharacterized protein LOC111460046 OS=Cucurbita moschata OX=3662 GN=LOC111460046 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.5e-40
Identity = 88/90 (97.78%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MAKGIVWATAEDLARNRGRVLSLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 60
          MAKGI+WATAEDLARNRGRV+SLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE
Sbjct: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 60

Query: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 91
          RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ
Sbjct: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]

BLAST of HG10010016 vs. ExPASy TrEMBL
Match: A0A5A7TEG5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold775G00090 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.8e-39
Identity = 86/90 (95.56%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  MAKGIVWATAEDLARNRGRVLSLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 60
          MAKGI+WATAEDLARNRGRV+SLYRQILRSLNSPNLPLSFAARLAKKAEVR IF+LASEE
Sbjct: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEE 60

Query: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 91
          RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ
Sbjct: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]

BLAST of HG10010016 vs. ExPASy TrEMBL
Match: A0A0A0LL01 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G120390 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.8e-39
Identity = 86/90 (95.56%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  MAKGIVWATAEDLARNRGRVLSLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 60
          MAKGI+WATAEDLARNRGRV+SLYRQILRSLNSPNLPLSFAARLAKKAEVR IF+LASEE
Sbjct: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEE 60

Query: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 91
          RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ
Sbjct: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]

BLAST of HG10010016 vs. ExPASy TrEMBL
Match: A0A1S3C4V6 (uncharacterized protein LOC103496906 OS=Cucumis melo OX=3656 GN=LOC103496906 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.8e-39
Identity = 86/90 (95.56%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  MAKGIVWATAEDLARNRGRVLSLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 60
          MAKGI+WATAEDLARNRGRV+SLYRQILRSLNSPNLPLSFAARLAKKAEVR IF+LASEE
Sbjct: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEE 60

Query: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 91
          RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ
Sbjct: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]

BLAST of HG10010016 vs. ExPASy TrEMBL
Match: A0A6J1DN67 (uncharacterized protein LOC111022772 OS=Momordica charantia OX=3673 GN=LOC111022772 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 5.0e-39
Identity = 87/90 (96.67%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  MAKGIVWATAEDLARNRGRVLSLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 60
          MAKG++WATAEDLARNRGRVLSLYRQILRSLNSP LPLSFAARLAKKAEVRGIFLLASEE
Sbjct: 1  MAKGMIWATAEDLARNRGRVLSLYRQILRSLNSPMLPLSFAARLAKKAEVRGIFLLASEE 60

Query: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 91
          RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ
Sbjct: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]

BLAST of HG10010016 vs. TAIR 10
Match: AT1G65032.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 115.9 bits (289), Expect = 1.6e-26
Identity = 56/84 (66.67%), Postives = 70/84 (83.33%), Query Frame = 0


Query: 3  KGIVWATAEDLARNRGRVLSLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEERS 62
          K ++W TAE+ A+NRG+VLSLYRQ+LRS+NSP L LS+A+RLAKKAEVR IFL  SEE S
Sbjct: 2  KSLIWLTAEEAAKNRGKVLSLYRQLLRSINSPKLQLSYASRLAKKAEVRTIFLFGSEEIS 61

Query: 63 LHNIEDLIDTAEYSLSLLRKGEIP 87
           HN+ DLI T EY+LS L++G+IP
Sbjct: 62 KHNVADLIRTGEYALSQLKQGKIP 85

The following BLAST results are available for this feature:

BLAST of HG10010016 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874375.1	7.1e-40	98.89	uncharacterized protein LOC120067065 [Benincasa hispida] >XP_038874376.1 unchara...	[more]
KAG7013408.1	9.3e-40	97.78	putative acyl-activating enzyme 19, partial [Cucurbita argyrosperma subsp. argyr...	[more]
XP_022958896.1	9.3e-40	97.78	uncharacterized protein LOC111460046 [Cucurbita moschata]	[more]
XP_023547728.1	2.1e-39	96.67	uncharacterized protein LOC111806583 [Cucurbita pepo subsp. pepo]	[more]
XP_008457166.1	7.9e-39	95.56	PREDICTED: uncharacterized protein LOC103496906 [Cucumis melo] >XP_031736881.1 u...	[more]

BLAST of HG10010016 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10010016 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H3E8	4.5e-40	97.78	uncharacterized protein LOC111460046 OS=Cucurbita moschata OX=3662 GN=LOC1114600...	[more]
A0A5A7TEG5	3.8e-39	95.56	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LL01	3.8e-39	95.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G120390 PE=4 SV=1	[more]
A0A1S3C4V6	3.8e-39	95.56	uncharacterized protein LOC103496906 OS=Cucumis melo OX=3656 GN=LOC103496906 PE=...	[more]
A0A6J1DN67	5.0e-39	96.67	uncharacterized protein LOC111022772 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]

BLAST of HG10010016 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65032.1	1.6e-26	66.67	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36724	COMPLEX 1 LYR-LIKE PROTEIN	coord: 1..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10010016.1	HG10010016.1	mRNA