HG10010015 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10010015
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr06: 17007183 .. 17007689 (+)
RNA-Seq ExpressionHG10010015
SyntenyHG10010015
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ACATATTTGATGGAAGAAAGAAAAGGAGATGCAAGAATTTTCATCATCTCAGGTTTGATCTTCCTTTGCATTATCTCGGGCGGTTTCCTCCTCTGTCTTTACCTTTTCCTCCCCGAATCACAAACTCCCGATTGGTATCCGATCGTCGGGATCATATTGGTTTCAACTCCCTGGATCTTTTGGCTTTCGGTTTATTTCTATCATTGCTTGAATCCTACTAAAGTGCAACTCAATGCCTTTGGCTCTAGTAATAATAACAACTCATCTAGCAAGAAGACAGGGGTTGCTAATAATAATAATAATAATAATGTTGGTTCAACAATTGAAGGCGATCTTGCTGAAGTTGAATCCCCTGGTGGAGGCAAACGCCGAGTGCATTTTGGTGCTGTGGTTGTCCTGGAAAAACAGCCACAATTAGATAGGAATTATAGCCATTCAAAACAACCTTCTACTATGTCTCCAAGGGAAACTGAAGTGCCATTGAGGACGTCAACCTCGTCGTCCTAG

mRNA sequence

ACATATTTGATGGAAGAAAGAAAAGGAGATGCAAGAATTTTCATCATCTCAGGTTTGATCTTCCTTTGCATTATCTCGGGCGGTTTCCTCCTCTGTCTTTACCTTTTCCTCCCCGAATCACAAACTCCCGATTGGTATCCGATCGTCGGGATCATATTGGTTTCAACTCCCTGGATCTTTTGGCTTTCGGTTTATTTCTATCATTGCTTGAATCCTACTAAAGTGCAACTCAATGCCTTTGGCTCTAGTAATAATAACAACTCATCTAGCAAGAAGACAGGGGTTGCTAATAATAATAATAATAATAATGTTGGTTCAACAATTGAAGGCGATCTTGCTGAAGTTGAATCCCCTGGTGGAGGCAAACGCCGAGTGCATTTTGGTGCTGTGGTTGTCCTGGAAAAACAGCCACAATTAGATAGGAATTATAGCCATTCAAAACAACCTTCTACTATGTCTCCAAGGGAAACTGAAGTGCCATTGAGGACGTCAACCTCGTCGTCCTAG

Coding sequence (CDS)

ACATATTTGATGGAAGAAAGAAAAGGAGATGCAAGAATTTTCATCATCTCAGGTTTGATCTTCCTTTGCATTATCTCGGGCGGTTTCCTCCTCTGTCTTTACCTTTTCCTCCCCGAATCACAAACTCCCGATTGGTATCCGATCGTCGGGATCATATTGGTTTCAACTCCCTGGATCTTTTGGCTTTCGGTTTATTTCTATCATTGCTTGAATCCTACTAAAGTGCAACTCAATGCCTTTGGCTCTAGTAATAATAACAACTCATCTAGCAAGAAGACAGGGGTTGCTAATAATAATAATAATAATAATGTTGGTTCAACAATTGAAGGCGATCTTGCTGAAGTTGAATCCCCTGGTGGAGGCAAACGCCGAGTGCATTTTGGTGCTGTGGTTGTCCTGGAAAAACAGCCACAATTAGATAGGAATTATAGCCATTCAAAACAACCTTCTACTATGTCTCCAAGGGAAACTGAAGTGCCATTGAGGACGTCAACCTCGTCGTCCTAG

Protein sequence

TYLMEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIILVSTPWIFWLSVYFYHCLNPTKVQLNAFGSSNNNNSSSKKTGVANNNNNNNVGSTIEGDLAEVESPGGGKRRVHFGAVVVLEKQPQLDRNYSHSKQPSTMSPRETEVPLRTSTSSS
Homology
BLAST of HG10010015 vs. NCBI nr
Match: XP_038875814.1 (uncharacterized protein LOC120068181 [Benincasa hispida])

HSP 1 Score: 268.9 bits (686), Expect = 3.0e-68
Identity = 143/168 (85.12%), Postives = 151/168 (89.88%), Query Frame = 0

Query: 4   MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIILVSTPWIFWLS 63
           MEERKGDARIFIISGLIFLCIISGG LLCLYLFLPESQTPDWYPIVGI+LVSTPWIFWLS
Sbjct: 1   MEERKGDARIFIISGLIFLCIISGGILLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLS 60

Query: 64  VYFYHCLNPTKVQLNAFGSSNNNNSSSKKTGVANNNNNNNVGSTIEGDLAEVESPGGGKR 123
           +YFYHCL PTKVQLNAFG  NNNNS SKKT  AN N+    G+TIEG+L EVESPG GKR
Sbjct: 61  IYFYHCLKPTKVQLNAFG-PNNNNSHSKKTEAANYNDG---GATIEGNLGEVESPGEGKR 120

Query: 124 RVHFGAVVVLEKQPQLDRNYSH---SKQPSTMSPRETEVPLRTSTSSS 169
           RVHFGAVVV+EKQPQLDRNYSH   SKQP+TMSPRETEVPLR+STSSS
Sbjct: 121 RVHFGAVVVMEKQPQLDRNYSHESQSKQPTTMSPRETEVPLRSSTSSS 164

BLAST of HG10010015 vs. NCBI nr
Match: XP_004138999.1 (uncharacterized protein LOC101203715 [Cucumis sativus] >KAE8651759.1 hypothetical protein Csa_006785 [Cucumis sativus])

HSP 1 Score: 234.2 bits (596), Expect = 8.3e-58
Identity = 127/168 (75.60%), Postives = 141/168 (83.93%), Query Frame = 0

Query: 1   TYLMEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIILVSTPWIF 60
           TYLMEERKGDARI IISGLIFLCII GGFLLCLYLFLPESQT DWYP +GI+LVSTPWIF
Sbjct: 12  TYLMEERKGDARIVIISGLIFLCIILGGFLLCLYLFLPESQTSDWYPTIGIVLVSTPWIF 71

Query: 61  WLSVYFYHCLNPTKVQLNAFGSSNNNNSSSKKTGVANNNNNNNVGSTIEGDLAEVESPGG 120
           WLSVY YHCL PTKV LN FG SN+ NSSSKKT  A+ NN ++VG   E D+ + E+PGG
Sbjct: 72  WLSVYIYHCLKPTKVLLNPFG-SNSINSSSKKT-EASKNNEDDVG---EDDVGDDETPGG 131

Query: 121 GKRRVHFGAVVVLEKQPQLDRNYSHSKQPSTMSPRETEVPLRTSTSSS 169
           GKR+VHFGAV V+EKQP LDRN SHSKQ ++ SPRE E+PLR STSSS
Sbjct: 132 GKRKVHFGAVFVMEKQPTLDRNSSHSKQSTSTSPREPEMPLRLSTSSS 174

BLAST of HG10010015 vs. NCBI nr
Match: KAG7026101.1 (hypothetical protein SDJN02_12600, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 156.4 bits (394), Expect = 2.2e-34
Identity = 85/163 (52.15%), Postives = 111/163 (68.10%), Query Frame = 0

Query: 4   MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIILVSTPWIFWLS 63
           MEERKGDARI IISGL+FLC+++GGFLLCLYLF+PES++ DWY +VGIILVSTPW+FW  
Sbjct: 1   MEERKGDARILIISGLMFLCVVAGGFLLCLYLFVPESESQDWYSVVGIILVSTPWMFWFL 60

Query: 64  VYFYHCLNPTKVQLNAFGSSNNNNSSSKKTGVANNNNNNNVGSTIEGDLAEVESPGGGKR 123
           VY YHCL P +VQ NA   + +++SSS +   A N     V +  + +  + ++PG GKR
Sbjct: 61  VYLYHCLKPIRVQSNA---ALSHSSSSNRPPSAANKGGGIVANLPQVESPDCDTPGDGKR 120

Query: 124 RVHFGAVVVLEKQPQLDRNYSHSKQPSTMSPRETEVPLRTSTS 167
           RVHFGAVVV   +PQ  +  SH      +   E+     TS+S
Sbjct: 121 RVHFGAVVVKGNKPQGGKKSSHDSGSKELRSNESGATSPTSSS 160

BLAST of HG10010015 vs. NCBI nr
Match: XP_023000624.1 (uncharacterized protein LOC111494867 [Cucurbita maxima])

HSP 1 Score: 152.1 bits (383), Expect = 4.2e-33
Identity = 83/163 (50.92%), Postives = 108/163 (66.26%), Query Frame = 0

Query: 4   MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIILVSTPWIFWLS 63
           MEERKGDA I IISGL+FLC+++GG LLCLYLF+PES++ DWY +VGIILVSTPWIFW  
Sbjct: 1   MEERKGDATILIISGLMFLCVVAGGLLLCLYLFVPESESQDWYSVVGIILVSTPWIFWFL 60

Query: 64  VYFYHCLNPTKVQLNAFGSSNNNNSSSKKTGVANNNNNNNVGSTIEGDLAEVESPGGGKR 123
           VY YHCL P ++Q NA   +  ++SSS +   A NN+   V +  + +  + ++PG GKR
Sbjct: 61  VYLYHCLKPIRLQSNA---ALKHSSSSNRPPSAANNSGGIVANLPQVESPDCDTPGDGKR 120

Query: 124 RVHFGAVVVLEKQPQLDRNYSHSKQPSTMSPRETEVPLRTSTS 167
           RVHFGAVVV    PQ  +  SH      +   E+     T +S
Sbjct: 121 RVHFGAVVVKGNNPQGGKKSSHDSSSKELRSNESGATSPTLSS 160

BLAST of HG10010015 vs. NCBI nr
Match: XP_022155761.1 (uncharacterized protein LOC111022806 [Momordica charantia])

HSP 1 Score: 147.9 bits (372), Expect = 7.8e-32
Identity = 89/172 (51.74%), Postives = 107/172 (62.21%), Query Frame = 0

Query: 1   TYLMEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIILVSTPWIF 60
           TYLMEERKGDARI IISG+IFLCIISGG LL LYL+LP+S++ DWYPIVGI+LV+TPWIF
Sbjct: 2   TYLMEERKGDARILIISGVIFLCIISGGLLLGLYLYLPQSESTDWYPIVGIVLVATPWIF 61

Query: 61  WLSVYFYHCLNPT----KVQLNAFGSSNNNNSSSKKTGVANNNNNNNVGSTIEGDLAEVE 120
           WL VY YHC  P       + NAF SS N    +     A + N               +
Sbjct: 62  WLLVYLYHCFKPAAQPQPPRFNAFNSSTNRAPPAANPSGAESPN--------------CD 121

Query: 121 SPGGGKRRVHFGAVVVLEKQPQLDRNYSHSKQPSTMSPRETEVPLRTSTSSS 169
           SPGGGKRRVHFG      ++  +D N ++        PRE+E+PL  S SSS
Sbjct: 122 SPGGGKRRVHFGTT----REEGMDSN-TNGGNNHEKCPRESELPLSPSISSS 154

BLAST of HG10010015 vs. ExPASy TrEMBL
Match: A0A0A0LN77 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G120380 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.9e-56
Identity = 124/165 (75.15%), Postives = 138/165 (83.64%), Query Frame = 0

Query: 4   MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIILVSTPWIFWLS 63
           MEERKGDARI IISGLIFLCII GGFLLCLYLFLPESQT DWYP +GI+LVSTPWIFWLS
Sbjct: 1   MEERKGDARIVIISGLIFLCIILGGFLLCLYLFLPESQTSDWYPTIGIVLVSTPWIFWLS 60

Query: 64  VYFYHCLNPTKVQLNAFGSSNNNNSSSKKTGVANNNNNNNVGSTIEGDLAEVESPGGGKR 123
           VY YHCL PTKV LN FG SN+ NSSSKKT  A+ NN ++VG   E D+ + E+PGGGKR
Sbjct: 61  VYIYHCLKPTKVLLNPFG-SNSINSSSKKT-EASKNNEDDVG---EDDVGDDETPGGGKR 120

Query: 124 RVHFGAVVVLEKQPQLDRNYSHSKQPSTMSPRETEVPLRTSTSSS 169
           +VHFGAV V+EKQP LDRN SHSKQ ++ SPRE E+PLR STSSS
Sbjct: 121 KVHFGAVFVMEKQPTLDRNSSHSKQSTSTSPREPEMPLRLSTSSS 160

BLAST of HG10010015 vs. ExPASy TrEMBL
Match: A0A6J1KKI3 (uncharacterized protein LOC111494867 OS=Cucurbita maxima OX=3661 GN=LOC111494867 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 2.0e-33
Identity = 83/163 (50.92%), Postives = 108/163 (66.26%), Query Frame = 0

Query: 4   MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIILVSTPWIFWLS 63
           MEERKGDA I IISGL+FLC+++GG LLCLYLF+PES++ DWY +VGIILVSTPWIFW  
Sbjct: 1   MEERKGDATILIISGLMFLCVVAGGLLLCLYLFVPESESQDWYSVVGIILVSTPWIFWFL 60

Query: 64  VYFYHCLNPTKVQLNAFGSSNNNNSSSKKTGVANNNNNNNVGSTIEGDLAEVESPGGGKR 123
           VY YHCL P ++Q NA   +  ++SSS +   A NN+   V +  + +  + ++PG GKR
Sbjct: 61  VYLYHCLKPIRLQSNA---ALKHSSSSNRPPSAANNSGGIVANLPQVESPDCDTPGDGKR 120

Query: 124 RVHFGAVVVLEKQPQLDRNYSHSKQPSTMSPRETEVPLRTSTS 167
           RVHFGAVVV    PQ  +  SH      +   E+     T +S
Sbjct: 121 RVHFGAVVVKGNNPQGGKKSSHDSSSKELRSNESGATSPTLSS 160

BLAST of HG10010015 vs. ExPASy TrEMBL
Match: A0A6J1DSP4 (uncharacterized protein LOC111022806 OS=Momordica charantia OX=3673 GN=LOC111022806 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 3.8e-32
Identity = 89/172 (51.74%), Postives = 107/172 (62.21%), Query Frame = 0

Query: 1   TYLMEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIILVSTPWIF 60
           TYLMEERKGDARI IISG+IFLCIISGG LL LYL+LP+S++ DWYPIVGI+LV+TPWIF
Sbjct: 2   TYLMEERKGDARILIISGVIFLCIISGGLLLGLYLYLPQSESTDWYPIVGIVLVATPWIF 61

Query: 61  WLSVYFYHCLNPT----KVQLNAFGSSNNNNSSSKKTGVANNNNNNNVGSTIEGDLAEVE 120
           WL VY YHC  P       + NAF SS N    +     A + N               +
Sbjct: 62  WLLVYLYHCFKPAAQPQPPRFNAFNSSTNRAPPAANPSGAESPN--------------CD 121

Query: 121 SPGGGKRRVHFGAVVVLEKQPQLDRNYSHSKQPSTMSPRETEVPLRTSTSSS 169
           SPGGGKRRVHFG      ++  +D N ++        PRE+E+PL  S SSS
Sbjct: 122 SPGGGKRRVHFGTT----REEGMDSN-TNGGNNHEKCPRESELPLSPSISSS 154

BLAST of HG10010015 vs. ExPASy TrEMBL
Match: A0A2I4FRW9 (uncharacterized protein LOC109001519 OS=Juglans regia OX=51240 GN=LOC109001519 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.1e-23
Identity = 68/132 (51.52%), Postives = 91/132 (68.94%), Query Frame = 0

Query: 4   MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIILVSTPWIFWLS 63
           MEERKGDAR++IIS + F CI++GG LL LY+F+P++ +  WYPIVG+ILV  PW FWL 
Sbjct: 1   MEERKGDARVYIISFMFFACIVTGGILLFLYIFVPQADSASWYPIVGMILVGIPWAFWLF 60

Query: 64  VYFYHCLNP-TKVQLNAFGSSNNNNSSSKKTGVANNNNNNNVGSTIEGDLAEVESP-GGG 123
            Y Y C+ P T  QL+     N+++ S++  G A N +N+    ++E  L    SP GGG
Sbjct: 61  TYLYRCIKPSTDTQLS---KQNSSHRSTQPVGGATNTDNSR---SLESPL---NSPCGGG 120

Query: 124 KRRVHFGAVVVL 134
           +RRVHFGAVVVL
Sbjct: 121 QRRVHFGAVVVL 123

BLAST of HG10010015 vs. ExPASy TrEMBL
Match: A0A6A1W806 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR2G013118 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 2.3e-21
Identity = 74/181 (40.88%), Postives = 105/181 (58.01%), Query Frame = 0

Query: 4   MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIILVSTPWIFWLS 63
           MEERKGDARI+IIS L F CI++GG LLCLY+FLP++Q+  WYP+ GIILV  PW FWL 
Sbjct: 1   MEERKGDARIYIISFLFFACIVTGGVLLCLYVFLPQTQSASWYPVAGIILVGIPWAFWLF 60

Query: 64  VYFYHCLNPT--KVQLNAFGSSNN-NNSSSKKTGVANNNNNNNVGSTIEGDLAEVESPGG 123
            Y Y CL P+    + N + SS+     ++  +G     N ++  S ++   A+      
Sbjct: 61  AYLYRCLKPSAGDPKPNEYESSHGPTPPAAPASGATTTPNTSSAESPVQSSCAQ------ 120

Query: 124 GKRRVHFGAVVVLEKQP----QLDRN---YSHSKQPSTMS---------PRETEVPLRTS 166
             RRVHFGAVVVL  +     Q +R+    +H+K+   +S          RE+E+P+ + 
Sbjct: 121 --RRVHFGAVVVLGDEEGGGGQRERDVQELAHAKETRGVSDEAVMLSIESRESEMPILSL 173

BLAST of HG10010015 vs. TAIR 10
Match: AT5G17590.1 (Putative membrane lipoprotein )

HSP 1 Score: 61.6 bits (148), Expect = 6.9e-10
Identity = 51/146 (34.93%), Postives = 69/146 (47.26%), Query Frame = 0

Query: 4   MEERKGDARIFIISGLIFLCIISGGFLLCLYLFLPESQTPDWYPIVGIILVSTPWIFWLS 63
           M++RKGD RI+II+ L   CI+ GG LL LYL    S     +   G++ V  PW+FW  
Sbjct: 1   MDQRKGDPRIYIITVLFLSCILIGGVLLGLYLV--RSDPNPLFLQAGMVFVGVPWLFWFL 60

Query: 64  VYFYHCLNPTKVQLNAFGSSNNNNSSSKKTGVANNNNNNNVGSTIEGDLAEVESPGGGKR 123
            Y Y C+    V   +  +  N+ S +       + N      T   D A   SP  G++
Sbjct: 61  AYVYSCVLKPCVIFVSQSTIFNSKSVTSFDPEKGDPNKAPETVTTTSDPAPRNSPREGEK 120

Query: 124 RVHFGAVVVL---EKQPQLDRNYSHS 147
            V FG VVVL   E   + D N S S
Sbjct: 121 HVQFGNVVVLGDEEGGKEEDHNESSS 144

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038875814.13.0e-6885.12uncharacterized protein LOC120068181 [Benincasa hispida][more]
XP_004138999.18.3e-5875.60uncharacterized protein LOC101203715 [Cucumis sativus] >KAE8651759.1 hypothetica... [more]
KAG7026101.12.2e-3452.15hypothetical protein SDJN02_12600, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023000624.14.2e-3350.92uncharacterized protein LOC111494867 [Cucurbita maxima][more]
XP_022155761.17.8e-3251.74uncharacterized protein LOC111022806 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LN772.9e-5675.15Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G120380 PE=4 SV=1[more]
A0A6J1KKI32.0e-3350.92uncharacterized protein LOC111494867 OS=Cucurbita maxima OX=3661 GN=LOC111494867... [more]
A0A6J1DSP43.8e-3251.74uncharacterized protein LOC111022806 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A2I4FRW91.1e-2351.52uncharacterized protein LOC109001519 OS=Juglans regia OX=51240 GN=LOC109001519 P... [more]
A0A6A1W8062.3e-2140.88Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR2G013118 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G17590.16.9e-1034.93Putative membrane lipoprotein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..168
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 142..168
NoneNo IPR availablePANTHERPTHR34964:SF1MEMBRANE LIPOPROTEIN-RELATEDcoord: 4..166
NoneNo IPR availablePANTHERPTHR34964MEMBRANE LIPOPROTEIN-RELATEDcoord: 4..166

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10010015.1HG10010015.1mRNA