HG10009972 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATGAGAGAGTATTGCAGGATGCTTTGCCCACAATTCTCATGGTTTTAGTTCAGTTTGGGTTTGCTGGAGTTAACATTTGCTACAAATTAGCTGCTGCCGATGGAATGAGTTTGAGGATTATTATTGCTTATCGTTTCTTATTTGCCTCTGCTTTCATTCTTTCCATTGCCTTCTTTCTCAAAAGGTAAATTTGTTTTTCTTTTTTACTTGCAGGTAGTCTAAGTAGTACCTAAGTATTAATTAATTAATTTAATTAAATTATTTGCAGAGGTAGAAGGCCGAAGCTTACTTGGTCGGTTCTTTTCAATGCTTTTCTATCTGGACTCTTTGGGTAA ATGAATGAGAGAGTATTGCAGGATGCTTTGCCCACAATTCTCATGGTTTTAGTTCAGTTTGGGTTTGCTGGAGTTAACATTTGCTACAAATTAGCTGCTGCCGATGGAATGAGTTTGAGGATTATTATTGCTTATCGTTTCTTATTTGCCTCTGCTTTCATTCTTTCCATTGCCTTCTTTCTCAAAAGAGGTAGAAGGCCGAAGCTTACTTGGTCGGTTCTTTTCAATGCTTTTCTATCTGGACTCTTTGGGTAA ATGAATGAGAGAGTATTGCAGGATGCTTTGCCCACAATTCTCATGGTTTTAGTTCAGTTTGGGTTTGCTGGAGTTAACATTTGCTACAAATTAGCTGCTGCCGATGGAATGAGTTTGAGGATTATTATTGCTTATCGTTTCTTATTTGCCTCTGCTTTCATTCTTTCCATTGCCTTCTTTCTCAAAAGAGGTAGAAGGCCGAAGCTTACTTGGTCGGTTCTTTTCAATGCTTTTCTATCTGGACTCTTTGGGTAA MNERVLQDALPTILMVLVQFGFAGVNICYKLAAADGMSLRIIIAYRFLFASAFILSIAFFLKRGRRPKLTWSVLFNAFLSGLFG Homology
BLAST of HG10009972 vs. NCBI nr
Match: XP_038875682.1 (WAT1-related protein At1g25270-like isoform X1 [Benincasa hispida]) HSP 1 Score: 148.7 bits (374), Expect = 2.3e-32 Identity = 77/84 (91.67%), Postives = 79/84 (94.05%), Query Frame = 0
BLAST of HG10009972 vs. NCBI nr
Match: XP_038875686.1 (WAT1-related protein At1g25270-like isoform X5 [Benincasa hispida]) HSP 1 Score: 148.7 bits (374), Expect = 2.3e-32 Identity = 77/84 (91.67%), Postives = 79/84 (94.05%), Query Frame = 0
BLAST of HG10009972 vs. NCBI nr
Match: XP_038875683.1 (WAT1-related protein At1g25270-like isoform X2 [Benincasa hispida]) HSP 1 Score: 148.7 bits (374), Expect = 2.3e-32 Identity = 77/84 (91.67%), Postives = 79/84 (94.05%), Query Frame = 0
BLAST of HG10009972 vs. NCBI nr
Match: XP_008457270.2 (PREDICTED: WAT1-related protein At1g25270-like [Cucumis melo]) HSP 1 Score: 144.1 bits (362), Expect = 5.7e-31 Identity = 73/84 (86.90%), Postives = 78/84 (92.86%), Query Frame = 0
BLAST of HG10009972 vs. NCBI nr
Match: XP_004139017.2 (WAT1-related protein At1g25270 isoform X1 [Cucumis sativus] >KAE8651782.1 hypothetical protein Csa_006147 [Cucumis sativus]) HSP 1 Score: 139.0 bits (349), Expect = 1.8e-29 Identity = 72/84 (85.71%), Postives = 77/84 (91.67%), Query Frame = 0
BLAST of HG10009972 vs. ExPASy Swiss-Prot
Match: Q4PT23 (WAT1-related protein At1g25270 OS=Arabidopsis thaliana OX=3702 GN=At1g25270 PE=2 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 3.0e-11 Identity = 33/72 (45.83%), Postives = 50/72 (69.44%), Query Frame = 0
BLAST of HG10009972 vs. ExPASy Swiss-Prot
Match: Q8GXB4 (WAT1-related protein At1g09380 OS=Arabidopsis thaliana OX=3702 GN=At1g09380 PE=2 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 1.5e-10 Identity = 35/77 (45.45%), Postives = 48/77 (62.34%), Query Frame = 0
BLAST of HG10009972 vs. ExPASy Swiss-Prot
Match: F4HVM3 (WAT1-related protein At1g68170 OS=Arabidopsis thaliana OX=3702 GN=At1g68170 PE=3 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 2.6e-10 Identity = 33/70 (47.14%), Postives = 48/70 (68.57%), Query Frame = 0
BLAST of HG10009972 vs. ExPASy Swiss-Prot
Match: Q9FL41 (WAT1-related protein At5g07050 OS=Arabidopsis thaliana OX=3702 GN=At5g07050 PE=2 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 7.5e-10 Identity = 32/82 (39.02%), Postives = 49/82 (59.76%), Query Frame = 0
BLAST of HG10009972 vs. ExPASy Swiss-Prot
Match: O80638 (WAT1-related protein At2g39510 OS=Arabidopsis thaliana OX=3702 GN=At2g39510 PE=2 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 1.4e-08 Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 0
BLAST of HG10009972 vs. ExPASy TrEMBL
Match: A0A1S3C5T3 (WAT1-related protein OS=Cucumis melo OX=3656 GN=LOC103496998 PE=3 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 2.7e-31 Identity = 73/84 (86.90%), Postives = 78/84 (92.86%), Query Frame = 0
BLAST of HG10009972 vs. ExPASy TrEMBL
Match: A0A0A0LLC4 (WAT1-related protein OS=Cucumis sativus OX=3659 GN=Csa_2G151030 PE=3 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 8.8e-30 Identity = 72/84 (85.71%), Postives = 77/84 (91.67%), Query Frame = 0
BLAST of HG10009972 vs. ExPASy TrEMBL
Match: A0A6J1DRY7 (WAT1-related protein OS=Momordica charantia OX=3673 GN=LOC111022969 PE=3 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.5e-24 Identity = 67/84 (79.76%), Postives = 73/84 (86.90%), Query Frame = 0
BLAST of HG10009972 vs. ExPASy TrEMBL
Match: A0A6J1ETT1 (WAT1-related protein OS=Cucurbita moschata OX=3662 GN=LOC111436444 PE=3 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 4.4e-21 Identity = 59/84 (70.24%), Postives = 68/84 (80.95%), Query Frame = 0
BLAST of HG10009972 vs. ExPASy TrEMBL
Match: A0A6J1EQD7 (WAT1-related protein OS=Cucurbita moschata OX=3662 GN=LOC111436444 PE=3 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 4.4e-21 Identity = 59/84 (70.24%), Postives = 68/84 (80.95%), Query Frame = 0
BLAST of HG10009972 vs. TAIR 10
Match: AT1G25270.1 (nodulin MtN21 /EamA-like transporter family protein ) HSP 1 Score: 68.9 bits (167), Expect = 2.2e-12 Identity = 33/72 (45.83%), Postives = 50/72 (69.44%), Query Frame = 0
BLAST of HG10009972 vs. TAIR 10
Match: AT1G09380.1 (nodulin MtN21 /EamA-like transporter family protein ) HSP 1 Score: 66.6 bits (161), Expect = 1.1e-11 Identity = 35/77 (45.45%), Postives = 48/77 (62.34%), Query Frame = 0
BLAST of HG10009972 vs. TAIR 10
Match: AT1G68170.1 (nodulin MtN21 /EamA-like transporter family protein ) HSP 1 Score: 65.9 bits (159), Expect = 1.8e-11 Identity = 33/70 (47.14%), Postives = 48/70 (68.57%), Query Frame = 0
BLAST of HG10009972 vs. TAIR 10
Match: AT5G07050.1 (nodulin MtN21 /EamA-like transporter family protein ) HSP 1 Score: 64.3 bits (155), Expect = 5.3e-11 Identity = 32/82 (39.02%), Postives = 49/82 (59.76%), Query Frame = 0
BLAST of HG10009972 vs. TAIR 10
Match: AT2G39510.1 (nodulin MtN21 /EamA-like transporter family protein ) HSP 1 Score: 60.1 bits (144), Expect = 1.0e-09 Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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