HG10009932 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10009932
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTranslocase subunit seca
LocationChr06: 14780898 .. 14781465 (+)
RNA-Seq ExpressionHG10009932
SyntenyHG10009932
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTGGGTTTGTGAAGAGATGATGAGCGCCGCCGCCGCCGCCGACCGCCGTGAGCGAGTGGTTTGTCCAAAACCTCGCCGTCTCGGTCTCATGAATGATACCGGCAACGACAACCCATTTAGACACCGTTTTGATTCAGATGCTCTGGATCTCCTATTCTTTAAGGTACATAATTTTTACTTTTAATTATTGAAATTAATAGATTTCATCCGAAGCGGATTGATGGATATTTTGTGTGGTTTTTTTTCAGGGTGGTTGTGGATTGGAGAATTTTAACAGTAGTAGTACACAATTAGCCTCGTCGCCGCCGTATTTTTGTGGGTCGCCGCCGAGTAGAGTAGCTAACCCATTAATCCAAGACGCTCGATTTGGGGACGAGAAGCAGAAGCTGCTCCCCCTCTTCTCGCCGGCGGCTTCTCCTCCGTCGTCTCCACCGTCGTCGGCCGGTCGGAAAGGCGGATGTGTTCGGGTAAATTTTGGTAACAACCCGGCGGTGAGGATCGAGGGGTTTGATTGCCGCCTCGACAGGGAGAGGCGAAACCGCAGCATCCCTGCTCTGGCTTAG

mRNA sequence

ATGAATTGGGTTTGTGAAGAGATGATGAGCGCCGCCGCCGCCGCCGACCGCCGTGAGCGAGTGGTTTGTCCAAAACCTCGCCGTCTCGGTCTCATGAATGATACCGGCAACGACAACCCATTTAGACACCGTTTTGATTCAGATGCTCTGGATCTCCTATTCTTTAAGGGTGGTTGTGGATTGGAGAATTTTAACAGTAGTAGTACACAATTAGCCTCGTCGCCGCCGTATTTTTGTGGGTCGCCGCCGAGTAGAGTAGCTAACCCATTAATCCAAGACGCTCGATTTGGGGACGAGAAGCAGAAGCTGCTCCCCCTCTTCTCGCCGGCGGCTTCTCCTCCGTCGTCTCCACCGTCGTCGGCCGGTCGGAAAGGCGGATGTGTTCGGGTAAATTTTGGTAACAACCCGGCGGTGAGGATCGAGGGGTTTGATTGCCGCCTCGACAGGGAGAGGCGAAACCGCAGCATCCCTGCTCTGGCTTAG

Coding sequence (CDS)

ATGAATTGGGTTTGTGAAGAGATGATGAGCGCCGCCGCCGCCGCCGACCGCCGTGAGCGAGTGGTTTGTCCAAAACCTCGCCGTCTCGGTCTCATGAATGATACCGGCAACGACAACCCATTTAGACACCGTTTTGATTCAGATGCTCTGGATCTCCTATTCTTTAAGGGTGGTTGTGGATTGGAGAATTTTAACAGTAGTAGTACACAATTAGCCTCGTCGCCGCCGTATTTTTGTGGGTCGCCGCCGAGTAGAGTAGCTAACCCATTAATCCAAGACGCTCGATTTGGGGACGAGAAGCAGAAGCTGCTCCCCCTCTTCTCGCCGGCGGCTTCTCCTCCGTCGTCTCCACCGTCGTCGGCCGGTCGGAAAGGCGGATGTGTTCGGGTAAATTTTGGTAACAACCCGGCGGTGAGGATCGAGGGGTTTGATTGCCGCCTCGACAGGGAGAGGCGAAACCGCAGCATCCCTGCTCTGGCTTAG

Protein sequence

MNWVCEEMMSAAAAADRRERVVCPKPRRLGLMNDTGNDNPFRHRFDSDALDLLFFKGGCGLENFNSSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKQKLLPLFSPAASPPSSPPSSAGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA
Homology
BLAST of HG10009932 vs. NCBI nr
Match: XP_038906747.1 (uncharacterized protein LOC120092671 [Benincasa hispida])

HSP 1 Score: 315.1 bits (806), Expect = 3.5e-82
Identity = 150/160 (93.75%), Postives = 154/160 (96.25%), Query Frame = 0

Query: 1   MNWVCEEMMSAAAAADRRERVVCPKPRRLGLMNDTGNDNPFRHRFDSDALDLLFFKGGCG 60
           MNWVCEEMM+   AADRRER+VCPKPRRLGLMND GNDNPFRHRFDSDALDLLFFKGGCG
Sbjct: 1   MNWVCEEMMT---AADRRERLVCPKPRRLGLMNDAGNDNPFRHRFDSDALDLLFFKGGCG 60

Query: 61  LENFNSSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKQKLLPLFSPAASPPSSPPSS 120
           LENFNSSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEK KLLPLFSPAASPPSSPP S
Sbjct: 61  LENFNSSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSSPPPS 120

Query: 121 AGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 161
           AGRKGGCVR+NFGNNPAVRIEGFDCRLDRERRNRS+PALA
Sbjct: 121 AGRKGGCVRINFGNNPAVRIEGFDCRLDRERRNRSVPALA 157

BLAST of HG10009932 vs. NCBI nr
Match: XP_004140334.1 (uncharacterized protein LOC101221533 [Cucumis sativus] >KGN50957.1 hypothetical protein Csa_007795 [Cucumis sativus])

HSP 1 Score: 301.6 bits (771), Expect = 4.0e-78
Identity = 145/160 (90.62%), Postives = 149/160 (93.12%), Query Frame = 0

Query: 1   MNWVCEEMMSAAAAADRRERVVCPKPRRLGLMNDTGNDNPFRHRFDSDALDLLFFKGGCG 60
           MNWVCEEM +  AA DRRER+VCPKPRRLGL+NDT NDNPFRHRFDSDALDLLF KGGCG
Sbjct: 1   MNWVCEEMQT--AATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCG 60

Query: 61  LENFNSSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKQKLLPLFSPAASPPSSPPSS 120
           LENFNSS+ QLASSPPYFCGSPPSRVANPLIQDARFGDEK KLLPLFSPAASPP SPP S
Sbjct: 61  LENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPLSPPPS 120

Query: 121 AGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 161
           AGRKGGCVRVNFG NPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 AGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 158

BLAST of HG10009932 vs. NCBI nr
Match: XP_008465783.1 (PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo] >XP_016903435.1 PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo])

HSP 1 Score: 297.4 bits (760), Expect = 7.6e-77
Identity = 144/160 (90.00%), Postives = 148/160 (92.50%), Query Frame = 0

Query: 1   MNWVCEEMMSAAAAADRRERVVCPKPRRLGLMNDTGNDNPFRHRFDSDALDLLFFKGGCG 60
           MNWVCEEM S  AA DRRER+VCPKPRRLGL+NDT NDNPFRHRFDSDA+DLLF KGGCG
Sbjct: 1   MNWVCEEMRS--AATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCG 60

Query: 61  LENFNSSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKQKLLPLFSPAASPPSSPPSS 120
           LE FNSS+TQLASS PYFCGSPPSRVANPLIQDARFGDEK KLLPLFS AASPP SPP S
Sbjct: 61  LEKFNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPS 120

Query: 121 AGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 161
           AGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 AGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 158

BLAST of HG10009932 vs. NCBI nr
Match: KAA0047427.1 (uncharacterized protein E6C27_scaffold498G00180 [Cucumis melo var. makuwa] >TYK04136.1 uncharacterized protein E5676_scaffold2119G00810 [Cucumis melo var. makuwa])

HSP 1 Score: 282.3 bits (721), Expect = 2.5e-72
Identity = 135/149 (90.60%), Postives = 140/149 (93.96%), Query Frame = 0

Query: 12  AAAADRRERVVCPKPRRLGLMNDTGNDNPFRHRFDSDALDLLFFKGGCGLENFNSSSTQL 71
           +AA DRRER+VCPKPRRLGL+NDT NDNPFRHRFDSDA+DLLF KGGCGLE FNSS+TQL
Sbjct: 3   SAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLEKFNSSNTQL 62

Query: 72  ASSPPYFCGSPPSRVANPLIQDARFGDEKQKLLPLFSPAASPPSSPPSSAGRKGGCVRVN 131
           ASS PYFCGSPPSRVANPLIQDARFGDEK KLLPLFS AASPP SPP SAGRKGGCVRVN
Sbjct: 63  ASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAGRKGGCVRVN 122

Query: 132 FGNNPAVRIEGFDCRLDRERRNRSIPALA 161
           FGNNPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 123 FGNNPAVRIEGFDCRLDRERRNRSIPALA 151

BLAST of HG10009932 vs. NCBI nr
Match: XP_022923501.1 (uncharacterized protein LOC111431174 [Cucurbita moschata])

HSP 1 Score: 253.4 bits (646), Expect = 1.3e-63
Identity = 128/159 (80.50%), Postives = 135/159 (84.91%), Query Frame = 0

Query: 7   EMMSAAAAADRRERVVCPKPRRLGLMNDTGNDNPFRHRFDS----DALDLLFFKGGCGLE 66
           E M+ AA  DRRER+VCPKPRRLGL+N T NDNPFRHRFDS    DALDLLFFKGGC LE
Sbjct: 15  EEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCDLE 74

Query: 67  NFNSSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKQKLLPLFSP-AASPPSSPPSSA 126
           NFNSSSTQLASSPPY CG+PPSRVANPLIQDARFG+EK K+LP+FSP  A PP SPP S 
Sbjct: 75  NFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPST 134

Query: 127 GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 161
            R GG VR NFGN PAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 135 DRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

BLAST of HG10009932 vs. ExPASy TrEMBL
Match: A0A0A0KRF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G373190 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.0e-78
Identity = 145/160 (90.62%), Postives = 149/160 (93.12%), Query Frame = 0

Query: 1   MNWVCEEMMSAAAAADRRERVVCPKPRRLGLMNDTGNDNPFRHRFDSDALDLLFFKGGCG 60
           MNWVCEEM +  AA DRRER+VCPKPRRLGL+NDT NDNPFRHRFDSDALDLLF KGGCG
Sbjct: 1   MNWVCEEMQT--AATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCG 60

Query: 61  LENFNSSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKQKLLPLFSPAASPPSSPPSS 120
           LENFNSS+ QLASSPPYFCGSPPSRVANPLIQDARFGDEK KLLPLFSPAASPP SPP S
Sbjct: 61  LENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPLSPPPS 120

Query: 121 AGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 161
           AGRKGGCVRVNFG NPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 AGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 158

BLAST of HG10009932 vs. ExPASy TrEMBL
Match: A0A1S3CR46 (uncharacterized protein LOC103503385 OS=Cucumis melo OX=3656 GN=LOC103503385 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 3.7e-77
Identity = 144/160 (90.00%), Postives = 148/160 (92.50%), Query Frame = 0

Query: 1   MNWVCEEMMSAAAAADRRERVVCPKPRRLGLMNDTGNDNPFRHRFDSDALDLLFFKGGCG 60
           MNWVCEEM S  AA DRRER+VCPKPRRLGL+NDT NDNPFRHRFDSDA+DLLF KGGCG
Sbjct: 1   MNWVCEEMRS--AATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCG 60

Query: 61  LENFNSSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKQKLLPLFSPAASPPSSPPSS 120
           LE FNSS+TQLASS PYFCGSPPSRVANPLIQDARFGDEK KLLPLFS AASPP SPP S
Sbjct: 61  LEKFNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPS 120

Query: 121 AGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 161
           AGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 AGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 158

BLAST of HG10009932 vs. ExPASy TrEMBL
Match: A0A5D3C147 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2119G00810 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.2e-72
Identity = 135/149 (90.60%), Postives = 140/149 (93.96%), Query Frame = 0

Query: 12  AAAADRRERVVCPKPRRLGLMNDTGNDNPFRHRFDSDALDLLFFKGGCGLENFNSSSTQL 71
           +AA DRRER+VCPKPRRLGL+NDT NDNPFRHRFDSDA+DLLF KGGCGLE FNSS+TQL
Sbjct: 3   SAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLEKFNSSNTQL 62

Query: 72  ASSPPYFCGSPPSRVANPLIQDARFGDEKQKLLPLFSPAASPPSSPPSSAGRKGGCVRVN 131
           ASS PYFCGSPPSRVANPLIQDARFGDEK KLLPLFS AASPP SPP SAGRKGGCVRVN
Sbjct: 63  ASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAGRKGGCVRVN 122

Query: 132 FGNNPAVRIEGFDCRLDRERRNRSIPALA 161
           FGNNPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 123 FGNNPAVRIEGFDCRLDRERRNRSIPALA 151

BLAST of HG10009932 vs. ExPASy TrEMBL
Match: A0A6J1E6Z2 (uncharacterized protein LOC111431174 OS=Cucurbita moschata OX=3662 GN=LOC111431174 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 6.1e-64
Identity = 128/159 (80.50%), Postives = 135/159 (84.91%), Query Frame = 0

Query: 7   EMMSAAAAADRRERVVCPKPRRLGLMNDTGNDNPFRHRFDS----DALDLLFFKGGCGLE 66
           E M+ AA  DRRER+VCPKPRRLGL+N T NDNPFRHRFDS    DALDLLFFKGGC LE
Sbjct: 15  EEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCDLE 74

Query: 67  NFNSSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKQKLLPLFSP-AASPPSSPPSSA 126
           NFNSSSTQLASSPPY CG+PPSRVANPLIQDARFG+EK K+LP+FSP  A PP SPP S 
Sbjct: 75  NFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPST 134

Query: 127 GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 161
            R GG VR NFGN PAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 135 DRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

BLAST of HG10009932 vs. ExPASy TrEMBL
Match: A0A6J1I2X1 (uncharacterized protein LOC111470460 OS=Cucurbita maxima OX=3661 GN=LOC111470460 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.3e-63
Identity = 130/162 (80.25%), Postives = 136/162 (83.95%), Query Frame = 0

Query: 4   VCEEMMSAAAAADRRERVVCPKPRRLGLMNDTGNDNPFRHRFDS----DALDLLFFKGGC 63
           V EEMM  AA  DRRER+VCPKPRRLGL+N T NDNPFRHRFDS    DALDLLFFKGGC
Sbjct: 13  VREEMM-RAADTDRRERLVCPKPRRLGLINATANDNPFRHRFDSIAANDALDLLFFKGGC 72

Query: 64  GLENFNSSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKQKLLPLFSP-AASPPSSPP 123
            LENF SSSTQLASSPPY CG+PPSRVANPLIQDARFG+EK K+LP+FSP  A PP SPP
Sbjct: 73  DLENFKSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYSPP 132

Query: 124 SSAGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 161
            S  R GG VR NFGN PAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 133 PSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

BLAST of HG10009932 vs. TAIR 10
Match: AT1G68490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 137.1 bits (344), Expect = 1.2e-32
Identity = 84/172 (48.84%), Postives = 108/172 (62.79%), Query Frame = 0

Query: 7   EMMSAAAAADRRER--VVCPKPRRLGLMNDTGNDNP-----FRHRF-------DSDALDL 66
           ++ S++ +   R++  VVCPKPRR+GL N+  + +      F H+        ++D LD+
Sbjct: 16  DLRSSSVSVVERDQTTVVCPKPRRIGLRNNHHHPSRSLRCYFSHQLELCESKAETDILDI 75

Query: 67  LFFKGGCGLENFNSSSTQLASSP-PYFCGSPPSRVANPLIQDARFGDEKQKLLPLFSP-- 126
           +  K G G E  N    Q+  SP P+ CGSPPSRVANPL QDARF DE   +  +  P  
Sbjct: 76  ILTKDGYGAEQVNK---QVIDSPSPFLCGSPPSRVANPLTQDARFRDEIVSVSSVIPPQL 135

Query: 127 AASPPSSPPSSAGRKGGC-VRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 161
              P SSP SS+GRKGGC VR NFGN+P VR+EGFDC LDR+ RN SIPALA
Sbjct: 136 GLPPSSSPSSSSGRKGGCVVRGNFGNSPKVRVEGFDC-LDRDSRNCSIPALA 183

BLAST of HG10009932 vs. TAIR 10
Match: AT5G16110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 125.6 bits (314), Expect = 3.7e-29
Identity = 81/170 (47.65%), Postives = 98/170 (57.65%), Query Frame = 0

Query: 6   EEMMSAAAAADRRERVVCPKPRRLGLMNDTGNDNPFRHRFDSDALDLLFFKGGCGL---- 65
           EEMM      DR++ VVCPKPRR+GL+ +     P R      A DL   K G  L    
Sbjct: 81  EEMM----GFDRKDLVVCPKPRRVGLLAN-NVIRPLRLHMSQAAADLCDSKAGAELLEII 140

Query: 66  ---ENFNSSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEK-------QKLLPLFSPAA 125
              E+  +    L+SSPPYF GSPPSR ANPL QDARF DEK          L  +S   
Sbjct: 141 RRKEDNGTIGQLLSSSPPYFPGSPPSRAANPLAQDARFRDEKLNPISPNSPFLQPYSATG 200

Query: 126 SPPSSPPSSAGRKGGCVRVNFG-NNPAVRIEGFDCRLDRERRNRSIPALA 161
            P  S  SS+    GCVR+ FG N+PAVR+EGFDC L+R+R+N SIPA+A
Sbjct: 201 FPSPSSSSSSSSSRGCVRMKFGLNSPAVRVEGFDC-LNRDRQNSSIPAMA 244

BLAST of HG10009932 vs. TAIR 10
Match: AT1G13390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 112.5 bits (280), Expect = 3.2e-25
Identity = 72/171 (42.11%), Postives = 98/171 (57.31%), Query Frame = 0

Query: 6   EEMMSAAAAADRRERVVCPKPRRLGLMNDTGNDN---PFRHRFD-------SDALDLLFF 65
           EEM   AA +DRR+ V+CPKPRR+G +N   + +      H+ +       S+ LD +  
Sbjct: 13  EEMRRNAAVSDRRDAVICPKPRRVGALNHHSSRSLRWQLNHQMELCESNSGSEILDFILT 72

Query: 66  KGGCGLENFNSSSTQLASSPP-YFCGSPPSRVANPLIQDARFGDEKQKLLPLFSPAASPP 125
           KGG G        T+   +PP +F GSPPSRV+NPL +D+ F   +++LL + SP+ S P
Sbjct: 73  KGGGG--GGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKDSLF---REELLMVASPSPSTP 132

Query: 126 SS---PPSSAGRKGGCV--RVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 161
            +    P S+ R G CV    +FGNNP VR+ GFDC  DR   NRSI  LA
Sbjct: 133 RATKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC--DRRSSNRSISTLA 176

BLAST of HG10009932 vs. TAIR 10
Match: AT1G13390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 112.5 bits (280), Expect = 3.2e-25
Identity = 72/171 (42.11%), Postives = 98/171 (57.31%), Query Frame = 0

Query: 6   EEMMSAAAAADRRERVVCPKPRRLGLMNDTGNDN---PFRHRFD-------SDALDLLFF 65
           EEM   AA +DRR+ V+CPKPRR+G +N   + +      H+ +       S+ LD +  
Sbjct: 13  EEMRRNAAVSDRRDAVICPKPRRVGALNHHSSRSLRWQLNHQMELCESNSGSEILDFILT 72

Query: 66  KGGCGLENFNSSSTQLASSPP-YFCGSPPSRVANPLIQDARFGDEKQKLLPLFSPAASPP 125
           KGG G        T+   +PP +F GSPPSRV+NPL +D+ F   +++LL + SP+ S P
Sbjct: 73  KGGGG--GGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKDSLF---REELLMVASPSPSTP 132

Query: 126 SS---PPSSAGRKGGCV--RVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 161
            +    P S+ R G CV    +FGNNP VR+ GFDC  DR   NRSI  LA
Sbjct: 133 RATKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC--DRRSSNRSISTLA 176

BLAST of HG10009932 vs. TAIR 10
Match: AT3G02555.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits to 130 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 108.6 bits (270), Expect = 4.7e-24
Identity = 73/145 (50.34%), Postives = 88/145 (60.69%), Query Frame = 0

Query: 19  ERVVCPKPRRLGLMNDTGNDNPFRHRFD-SDALDLLFFKGGCG-LENFNSSSTQLASSPP 78
           + VVCPKPRR   +       PFR  F  S A D+   K G   L+ F    +  + SPP
Sbjct: 29  DSVVCPKPRRANNV-----IRPFRLHFSLSGADDVCDSKAGEDLLDIFRRKESVSSRSPP 88

Query: 79  YFCGSPPSRVANPLIQDARFGDEKQKLLPLFSPAASPPSSPPSSAGRKGGCVRVNFGNNP 138
           +F GSPPSR ANPL QDARFGDEK   L   SP+ SP    PS++  K GC R+ FG  P
Sbjct: 89  FFLGSPPSRAANPLAQDARFGDEK---LNTVSPSLSP--LLPSASRVKSGCGRMKFGVKP 148

Query: 139 A-VRIEGFDCRLDRERRNRSIPALA 161
           A VR+EGFDC L+R+R N SIPA+A
Sbjct: 149 ATVRVEGFDC-LNRDRPNSSIPAMA 162

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038906747.13.5e-8293.75uncharacterized protein LOC120092671 [Benincasa hispida][more]
XP_004140334.14.0e-7890.63uncharacterized protein LOC101221533 [Cucumis sativus] >KGN50957.1 hypothetical ... [more]
XP_008465783.17.6e-7790.00PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo] >XP_016903435.1 P... [more]
KAA0047427.12.5e-7290.60uncharacterized protein E6C27_scaffold498G00180 [Cucumis melo var. makuwa] >TYK0... [more]
XP_022923501.11.3e-6380.50uncharacterized protein LOC111431174 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KRF12.0e-7890.63Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G373190 PE=4 SV=1[more]
A0A1S3CR463.7e-7790.00uncharacterized protein LOC103503385 OS=Cucumis melo OX=3656 GN=LOC103503385 PE=... [more]
A0A5D3C1471.2e-7290.60Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1E6Z26.1e-6480.50uncharacterized protein LOC111431174 OS=Cucurbita moschata OX=3662 GN=LOC1114311... [more]
A0A6J1I2X12.3e-6380.25uncharacterized protein LOC111470460 OS=Cucurbita maxima OX=3661 GN=LOC111470460... [more]
Match NameE-valueIdentityDescription
AT1G68490.11.2e-3248.84unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G16110.13.7e-2947.65unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G13390.13.2e-2542.11unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G13390.23.2e-2542.11unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G02555.14.7e-2450.34unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..127
NoneNo IPR availablePANTHERPTHR33384:SF18BNAA07G24630D PROTEINcoord: 8..160
NoneNo IPR availablePANTHERPTHR33384EXPRESSED PROTEINcoord: 8..160

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10009932.1HG10009932.1mRNA