HG10009932 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATTGGGTTTGTGAAGAGATGATGAGCGCCGCCGCCGCCGCCGACCGCCGTGAGCGAGTGGTTTGTCCAAAACCTCGCCGTCTCGGTCTCATGAATGATACCGGCAACGACAACCCATTTAGACACCGTTTTGATTCAGATGCTCTGGATCTCCTATTCTTTAAGGTACATAATTTTTACTTTTAATTATTGAAATTAATAGATTTCATCCGAAGCGGATTGATGGATATTTTGTGTGGTTTTTTTTCAGGGTGGTTGTGGATTGGAGAATTTTAACAGTAGTAGTACACAATTAGCCTCGTCGCCGCCGTATTTTTGTGGGTCGCCGCCGAGTAGAGTAGCTAACCCATTAATCCAAGACGCTCGATTTGGGGACGAGAAGCAGAAGCTGCTCCCCCTCTTCTCGCCGGCGGCTTCTCCTCCGTCGTCTCCACCGTCGTCGGCCGGTCGGAAAGGCGGATGTGTTCGGGTAAATTTTGGTAACAACCCGGCGGTGAGGATCGAGGGGTTTGATTGCCGCCTCGACAGGGAGAGGCGAAACCGCAGCATCCCTGCTCTGGCTTAG ATGAATTGGGTTTGTGAAGAGATGATGAGCGCCGCCGCCGCCGCCGACCGCCGTGAGCGAGTGGTTTGTCCAAAACCTCGCCGTCTCGGTCTCATGAATGATACCGGCAACGACAACCCATTTAGACACCGTTTTGATTCAGATGCTCTGGATCTCCTATTCTTTAAGGGTGGTTGTGGATTGGAGAATTTTAACAGTAGTAGTACACAATTAGCCTCGTCGCCGCCGTATTTTTGTGGGTCGCCGCCGAGTAGAGTAGCTAACCCATTAATCCAAGACGCTCGATTTGGGGACGAGAAGCAGAAGCTGCTCCCCCTCTTCTCGCCGGCGGCTTCTCCTCCGTCGTCTCCACCGTCGTCGGCCGGTCGGAAAGGCGGATGTGTTCGGGTAAATTTTGGTAACAACCCGGCGGTGAGGATCGAGGGGTTTGATTGCCGCCTCGACAGGGAGAGGCGAAACCGCAGCATCCCTGCTCTGGCTTAG ATGAATTGGGTTTGTGAAGAGATGATGAGCGCCGCCGCCGCCGCCGACCGCCGTGAGCGAGTGGTTTGTCCAAAACCTCGCCGTCTCGGTCTCATGAATGATACCGGCAACGACAACCCATTTAGACACCGTTTTGATTCAGATGCTCTGGATCTCCTATTCTTTAAGGGTGGTTGTGGATTGGAGAATTTTAACAGTAGTAGTACACAATTAGCCTCGTCGCCGCCGTATTTTTGTGGGTCGCCGCCGAGTAGAGTAGCTAACCCATTAATCCAAGACGCTCGATTTGGGGACGAGAAGCAGAAGCTGCTCCCCCTCTTCTCGCCGGCGGCTTCTCCTCCGTCGTCTCCACCGTCGTCGGCCGGTCGGAAAGGCGGATGTGTTCGGGTAAATTTTGGTAACAACCCGGCGGTGAGGATCGAGGGGTTTGATTGCCGCCTCGACAGGGAGAGGCGAAACCGCAGCATCCCTGCTCTGGCTTAG MNWVCEEMMSAAAAADRRERVVCPKPRRLGLMNDTGNDNPFRHRFDSDALDLLFFKGGCGLENFNSSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKQKLLPLFSPAASPPSSPPSSAGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA Homology
BLAST of HG10009932 vs. NCBI nr
Match: XP_038906747.1 (uncharacterized protein LOC120092671 [Benincasa hispida]) HSP 1 Score: 315.1 bits (806), Expect = 3.5e-82 Identity = 150/160 (93.75%), Postives = 154/160 (96.25%), Query Frame = 0
BLAST of HG10009932 vs. NCBI nr
Match: XP_004140334.1 (uncharacterized protein LOC101221533 [Cucumis sativus] >KGN50957.1 hypothetical protein Csa_007795 [Cucumis sativus]) HSP 1 Score: 301.6 bits (771), Expect = 4.0e-78 Identity = 145/160 (90.62%), Postives = 149/160 (93.12%), Query Frame = 0
BLAST of HG10009932 vs. NCBI nr
Match: XP_008465783.1 (PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo] >XP_016903435.1 PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo]) HSP 1 Score: 297.4 bits (760), Expect = 7.6e-77 Identity = 144/160 (90.00%), Postives = 148/160 (92.50%), Query Frame = 0
BLAST of HG10009932 vs. NCBI nr
Match: KAA0047427.1 (uncharacterized protein E6C27_scaffold498G00180 [Cucumis melo var. makuwa] >TYK04136.1 uncharacterized protein E5676_scaffold2119G00810 [Cucumis melo var. makuwa]) HSP 1 Score: 282.3 bits (721), Expect = 2.5e-72 Identity = 135/149 (90.60%), Postives = 140/149 (93.96%), Query Frame = 0
BLAST of HG10009932 vs. NCBI nr
Match: XP_022923501.1 (uncharacterized protein LOC111431174 [Cucurbita moschata]) HSP 1 Score: 253.4 bits (646), Expect = 1.3e-63 Identity = 128/159 (80.50%), Postives = 135/159 (84.91%), Query Frame = 0
BLAST of HG10009932 vs. ExPASy TrEMBL
Match: A0A0A0KRF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G373190 PE=4 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 2.0e-78 Identity = 145/160 (90.62%), Postives = 149/160 (93.12%), Query Frame = 0
BLAST of HG10009932 vs. ExPASy TrEMBL
Match: A0A1S3CR46 (uncharacterized protein LOC103503385 OS=Cucumis melo OX=3656 GN=LOC103503385 PE=4 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 3.7e-77 Identity = 144/160 (90.00%), Postives = 148/160 (92.50%), Query Frame = 0
BLAST of HG10009932 vs. ExPASy TrEMBL
Match: A0A5D3C147 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2119G00810 PE=4 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 1.2e-72 Identity = 135/149 (90.60%), Postives = 140/149 (93.96%), Query Frame = 0
BLAST of HG10009932 vs. ExPASy TrEMBL
Match: A0A6J1E6Z2 (uncharacterized protein LOC111431174 OS=Cucurbita moschata OX=3662 GN=LOC111431174 PE=4 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 6.1e-64 Identity = 128/159 (80.50%), Postives = 135/159 (84.91%), Query Frame = 0
BLAST of HG10009932 vs. ExPASy TrEMBL
Match: A0A6J1I2X1 (uncharacterized protein LOC111470460 OS=Cucurbita maxima OX=3661 GN=LOC111470460 PE=4 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 2.3e-63 Identity = 130/162 (80.25%), Postives = 136/162 (83.95%), Query Frame = 0
BLAST of HG10009932 vs. TAIR 10
Match: AT1G68490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 137.1 bits (344), Expect = 1.2e-32 Identity = 84/172 (48.84%), Postives = 108/172 (62.79%), Query Frame = 0
BLAST of HG10009932 vs. TAIR 10
Match: AT5G16110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 125.6 bits (314), Expect = 3.7e-29 Identity = 81/170 (47.65%), Postives = 98/170 (57.65%), Query Frame = 0
BLAST of HG10009932 vs. TAIR 10
Match: AT1G13390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 112.5 bits (280), Expect = 3.2e-25 Identity = 72/171 (42.11%), Postives = 98/171 (57.31%), Query Frame = 0
BLAST of HG10009932 vs. TAIR 10
Match: AT1G13390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 112.5 bits (280), Expect = 3.2e-25 Identity = 72/171 (42.11%), Postives = 98/171 (57.31%), Query Frame = 0
BLAST of HG10009932 vs. TAIR 10
Match: AT3G02555.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits to 130 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 108.6 bits (270), Expect = 4.7e-24 Identity = 73/145 (50.34%), Postives = 88/145 (60.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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