HG10009927 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10009927
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionzinc finger protein JAGGED
LocationChr06: 14495029 .. 14501336 (+)
RNA-Seq ExpressionHG10009927
SyntenyHG10009927
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAACTCAAATCTAACATCGAAATATAATGGGTAAGTGTTGAAACTCGCCGAACAGGGGAAAATGTTGGTGTAAGCTATGGAAAGAACCTACACATCACACCGAAACTCAGATCTAGATGGAGTGAACTCAGATCTGGACAAGCTTGATGGGCGTGAACGAAGCTCTTAGATCCGACACGTGAAGGAAGCTCTCGGATCTGAACGACACGTGGATGAGCAGACAAGCTGCGACGACCAACGATCAGATCTGGACGACTGCCGAAAATTAGATCTGGCAAATCTCTGGCATTGACGGCGTGGTGGAGAGAGAAAAGAGAAGATGGTGAAGGTTGAGAGAGAAAGGAGAAGATAGGTGAAGGTGAAGGTTGAGAGAGAAAGGAGAAGATGGGTGAAGGTTGAGAGAGAAAGGAGTGGGAGTTGTGTGAGAGAGAAAGAGTGGGTTTACAAAAAGAAAAGTGGGTTGGAAATTCAAAATTTATGAAGGATATTTAATGTCGGTTTAAAACCGACATTGTAGCCTCATTAAACCGACATTAAAGATCCAATTTGTTTTCTAAAACCGACATTGTACATCCGTGCTGATTTATTTCATCAAAGGCCTAATTTCTTGTAGTGTCCATGAATTGCTTTCAGTAATGTAATGTTTTTAGCTAATCTTTTTATGTTTAAGAAAACGTTAAAGTATGTTTTATTTTAATGGCTTTAGGATGACAAGAAAACATGTAATTTTATGAATGGTTAAAGATTATGAGTTATGAGATTTATGGAAAAATGATTTTTAAATGTACTAGATCTTGTACCCATGTGATTACCTAATGAACTACGTGAATGTGTTTTCTGGTGTAAATGATTTGGTAATTTTTTTATATACCTTGTGAATGTGTTTATAAAATGTAAATGTTATGGTTATGTTCTCCGATACACCACCAAAATGTGTTCAGTGGTGTAAATGTTGACCTACGTGCATATATGGAAAGGAAAAGTCAATTGTGTGTATTGATCTACACCTAGATGTTTAAGTTGGGGTACAAGTTTAGTGATGTTTTTCATAAGTTAATGTGTTAAGCTTATTAAGGATTGTTATTTATGAGAATTTTCTATTGTTTATTATTCTTGAATGTTAAAATGATTATGTTCTGAACTTTGAACTTTGGTACGTTTTTAAGAAAGTTCTGATAAAGTTATTTTAAATGTCAAACTCACCACTCACTGGGCATTTTAGCTAATTCTTTCCTTTTATTTTTCCTACCACGTTACTCTTGAGTTTCAGAAAGAGTTAGCTTATTAGTATCTGCCATCGGTCACACCACATGTCGTATAATATCTTTTGTATGTATATCTAGCTAGAAGTTAAGGATGTTTAATGTGTCGTATTATGAATGTTAAATTCAGGAAAGTATAAATAAAGTAAAGTTTAAGATTAGAAAAGTTTTGACAGTAAACTCTATTGCACATTTGGAGATGCTTATCGTCGCATCTCGTTCTAGGTTTAGTAGAATAATCTGGAGGTTTGACATGTGAGGTTTATATAAAAGATGAAAAAAAATGTACAGAAAAGGATACAATTGAACAACAAAATGAGAAGAAAAATTGAGACACACCAAAAAGAAAAAAATTAATGTACAAAAAATGAAAAAATTGAAAAAGAAATTAAAACTGCTTCTGGAACATGGAAGCAAAAAATAAAATTGATTGATCATTTACTATCAAAATATGAAATTATCAATATATAGAAAACGTTTTTGAAGAAAAAAAATTATACATGATTTGCATACAAAGGAAAGGATGGGTTTGTAATTTCTTACCCAAAAATTTGAAAGGAAAAAAACATTCCTTCTAGTTGCAATCTCATACCCGCCAAATTGGAAAGAAAAATAAATAATAAAAAGGTTAATACTTTCAAATTTATAATAAAACAATAATAAAGTAAAGGGTATTTTGGTAAGCTCCAATTATGGAAAATTTGATAAAAAAAAATCACGAATATATAATAGGGGATGTTTTAAAAATAGAAAAATAAGTAAAACTATTTACATAAAATAGCAAATTTTTTAAATAGTTGTGATAGACGCTGATAGAAGTCTATCAGGATCTGTCAGTGATAGAAGTCTATCAATGATAGATGCTGATAGAAGTCTATCAATATCTATCAGTGTTTTTTCTGCTATTTTCTGTAAATAGTTTGACATTTTTTCTATTTGTGAAAATTTTCCTATATAATATATGTATGTATTTGAGACATTTTTTCAAATATATCCTATAGTTGAGTTCGTTTGATTCAATTTATCTTTTGATAAGCTATAATCCTCTTGTAATCTACTTGTTTTGACAATCTTTGACTTTTCTTCGATGTCTTTTCCAAATAGGGAGAAAAATTATTTGAGAGTCTACTCCAATTGAAGAGGTCTAATATTATATTATAATGGCAATTGTTTGGAAAAATATCAATTTTGACCTTAAACTTGTCCGTTGCATAAATTTGAACTTAAATTTAGTTTCATCAAATTTGACCTTAAATTTATATAAATGTTACAATTTTATTAACCTTAAATTTAAAAAAGTATTGCAATTTATTGTAATTTTAACCCTCCAATAAATTATTATTTCAAGCATTGTTAAAAATATAGTAGGTTAGAATTTTTTTTTTAATTTGAAAATATAATTCAATGGTTAATTTCTATATTGATTAGACGTATTTTTGTGCAAAATCTTATTTTTATTGAAATTAATGTGTTTATGAAGATCTTTACATTAGTTTTTAGAAAATTTTCACATATAGAAAAAATGTCAAACTATTTACAGAAAATAGCAAAAAACATTGATAGACATTGATAGACTTTTATAAGCATCTATCAGTGATAGACTTCTATCATTTTTATCACTGATAGACTCTGATAGACTTCTATCAGCGTTTATCACAACAATCTAAAAATTTTGCTATTTTGTATAAATAGTTTCCCTTATTTTTCTATTTTAAAAAATTTTCTATTTTTTTTTCTTTGTTAAAAATAGTACGTAAAATTAACGAAAATTGAATCAAGGGTTAAAATTGTAACACTTGTGTAAGTTAAGTGTCAAAATTGATGAAATTGATTTTTTTTTTTTTTTTTGGATTCCTACTTCATGCCTTCTATGGAATAATTTTATCAACGTTAGCGATATGAGAGAACAGATTCTTGATAGGGGCAGTAATATTATTTCTCCTTGTAAGATAAAATATCTAATTGTAACCATTGAATGGCCAAATCTTATACTTTATATATATATATATATAAAAGCCAAATATATAGAGACTTTATAGTGAAAGAAACCAAAATATATGATGACCATATTAAATTTAGGAGAAGGGACAATTGAGAGAGAGGATGCATAGAATAACTAGGGTTCTCATATTCAATAGAATTGTTTTAAAAGATACATACACCTAATAACTTATTTATTTTTATGAAAGATTTAAAATACTAATCTAAGTAACAAGATACTTACATATATATATATAAACCCAAAGCCTAATTCAAATACAAAATGCAAACATAATTGAATTTAAATAACATAATCTAAATGTAATAGTATAGTATACAATGACAAACAAACAAAACATAAAAAGTATTGGGTTGGAAATTAAAAAAAATAAGGGAGGGCCTAATGTTAATTTTGTGTGAGGATTTAGTTAAGGGTTTGATTTAAAACTGAGTGAAATATGATTAATAATAGTAAGAGGGGTAATTAGTGGTTTGTGATGTGTGAGTAACTAAAAACAAAGGCAAAAACGTCCTTCTCAACCAAACGAGACCAGATTTTGCATATAATAACCCTAAACCCTTTGATTTCTTCCCTTTTAAAGTCACGAGAGGCTTCCTGTTGTCTCTTTGTTGTTGTTTCAAGAGAGAGAGAGAGTGGCAGATGAACTGATAGAGAACTTTCAAAGCTCTTTTTCTTCAACACCCCATTACTCAACTACCATCTCTCTCAAACTCCAAGTCTTTTTAATTTTATTTTAATTAATTTTCTAATACTCTCCCCTACTCCCTCCTCTTCCCACCATACTTTCTGTCTGTTTCATCATGTAATTAACTCTTCCCCACAATTTTTTCCTTTTTTTAAAAAAAAAATCCCCTCTTGTTTTTTCCTTTTGATTAATTAGTATATATGTTTTGAAATAACTGATGTTGTTTAATTTTTGTTGGTTTGCAGGCGATCCGAGGGGAGCCCATTAGACCTCACCAACTTACCTGAAGATTATATCAGAGATGGGAAACAGATTATTGAAGATAGCTCTAGTGGTAAACGAAATAAAAGTATTAAAATGATGATTTGGGAGTTAATAAAATGGTGGGAAGAGTTGAGTAAAATGGTTTGTTTTGCAGGTCATCGGAAAAAGAAAAGTGGGTTGAAAGAGGGAAAAGAGGAGTCCGGAAAAGTGTATGAATGCAGGTTTTGTTCACTCAAGTTTTGCAAATCCCAGGCTCTTGGTGGCCACATGAACCGCCACCGCCAAGGCAAAATTACTACTCTCATTTTTTTTTTTTTTTATATTTATTATTATTATTATTATTTTAATGAATGATTAGTCATGTCATGGAGGAGGGAGTTTTGGGGGTATTTTGTTTTGTTTTTGTTTTATGGGTGAATTATTATTAGTTGGAGGCTGGAGCAGCAGATTTGTTTGTGTATGATTTGATTTTTGACTTCATTTGTGTTTGGTTTTTGGTCAGAGAGAGAGACAGAGACACTGAATCGAGCTCGTCAGCTTGTTTTCAGTAACGATAACCTCGCCGCCCAACCACCTCCTCCTCCTCATTTAGGGTATTCATCTCTCTCTTCCTTCAAGCCTTTCATTCTTAAACCTCTCATCTTTTTTAACTCACTATTTAACCTCAATTCAATATTTAGAATATATTTTCAAGTGTTTAATTTAAAAAATAAATCATTTTAAGAAAAATTTGAGTGTTTAACAATCACTCAAAATAAATTTTGAAGTGTATTTTAAATCATTTTTATTAAAATAGTTTAAATAAAAAATGAAATTTTGCTAAATATTTTTTTCTTAAGTCAATCTAAACGGACCTTACTTAAAAAAAAAAAAAAATCAACCTACTTACATTTCCCTACCTATTGTATTTATCCCAGAAAAAAAAACAAAGAAAAGATCTTTTAAATTTTACCCATATAAAACATAAACTAAAAGATTGAGGGAAGACATATCTCACAATTTTTAAAAGATGCACTGGTATTTTTTTTTTTTTTTTTTTATAACATGTGGGGAAATTGAATCTATGACTTCGAAGTTGATAACACAAGTACTATACTAGTTAAGTTATGCCAATTTTAGCTAAAAGATACCTAGGTTCTATGGGGTTACTTCTCTTGTTGTCGGTGATCGGGGAATTTTGTGATATTTATCTACTACAACCCCTTTTCAAATCTAGCAAACTATTAAGCAATATTTGGAAAGATAAAAAAAATTTGCTACATTTTTTGTGATAATAAAATAGTTCTTCTCTAATTTCCTCTTTGAATTTCTAGAATTGAAAGATTACACGTCCCTAATAAAATTTGTGTATTTTTGGGTGATTAGGTGCTGCCATTCAATGGCACCGGCAAACTACCACACTCCCGGTGGCGGAGGCGGGGGCGGCGTAGGAACTGATTCAACCCTGCCTCTTAGATTCCCAACGAGAATGTTCTCCGGGTCCTCCCCAAGCACACTTTTGCCGCAGCCGCCGCCACCAACGCTACCTCCGTCGCACCAGCCATATCTATACAGCTCGCCGTCGCGGCCTTCGAGTTTCCCTTCCTATTATCCTCCTCCACAAGCCTCCATCAACGACTACTACGTGGGGCATGTGTTGGGGAACCCTTCACAATGCAGTCATCAGACAGTGAACTACGGTTCCAGCTCGGTGGAGTCAAGTAGCTACACTTGCATCGGAGCTCCGGTAGGGCATGGGGCGGCGTTCGGTGGACGAGATGGCGGTGGCAGTGGCGGTAGAGACGGATCACAGCAGCAACAGCAGCAGCAGCAGCAGCGTTTGGACGTTCCTTCTTCGATCAATCGGTTTCAAGATGGATTCTAAAAAGAAGATTAGAATATTTTTTGTTTTAAAATTTTTCTGAGTAATGTTATTGAAATTCTGCAATGACACGCCACCCAGAGAAAGAGAGAGAGACATAACAAGCTGACAAATGGGGTCATAAATCATAATACAAGGGAAAAGGGTTTGTAATTGGTTTGTATTGTACGACCTATCTGTGAAAAAGGAGCAAACTGTGAAACAAGAGATTGATGGGACAAGAAGTTAG

mRNA sequence

ATGGGTAACTCAAATCTAACATCGAAATATAATGGGCGATCCGAGGGGAGCCCATTAGACCTCACCAACTTACCTGAAGATTATATCAGAGATGGGAAACAGATTATTGAAGATAGCTCTAGTGAGAGAGAGACAGAGACACTGAATCGAGCTCGTCAGCTTGTTTTCAGTAACGATAACCTCGCCGCCCAACCACCTCCTCCTCCTCATTTAGGGTGCTGCCATTCAATGGCACCGGCAAACTACCACACTCCCGGTGGCGGAGGCGGGGGCGGCGTAGGAACTGATTCAACCCTGCCTCTTAGATTCCCAACGAGAATGTTCTCCGGGTCCTCCCCAAGCACACTTTTGCCGCAGCCGCCGCCACCAACGCTACCTCCGTCGCACCAGCCATATCTATACAGCTCGCCGTCGCGGCCTTCGAGTTTCCCTTCCTATTATCCTCCTCCACAAGCCTCCATCAACGACTACTACGTGGGGCATGTGTTGGGGAACCCTTCACAATGCAGTCATCAGACAGTGAACTACGGTTCCAGCTCGGTGGAGTCAAGTAGCTACACTTGCATCGGAGCTCCGGAGCAAACTGTGAAACAAGAGATTGATGGGACAAGAAGTTAG

Coding sequence (CDS)

ATGGGTAACTCAAATCTAACATCGAAATATAATGGGCGATCCGAGGGGAGCCCATTAGACCTCACCAACTTACCTGAAGATTATATCAGAGATGGGAAACAGATTATTGAAGATAGCTCTAGTGAGAGAGAGACAGAGACACTGAATCGAGCTCGTCAGCTTGTTTTCAGTAACGATAACCTCGCCGCCCAACCACCTCCTCCTCCTCATTTAGGGTGCTGCCATTCAATGGCACCGGCAAACTACCACACTCCCGGTGGCGGAGGCGGGGGCGGCGTAGGAACTGATTCAACCCTGCCTCTTAGATTCCCAACGAGAATGTTCTCCGGGTCCTCCCCAAGCACACTTTTGCCGCAGCCGCCGCCACCAACGCTACCTCCGTCGCACCAGCCATATCTATACAGCTCGCCGTCGCGGCCTTCGAGTTTCCCTTCCTATTATCCTCCTCCACAAGCCTCCATCAACGACTACTACGTGGGGCATGTGTTGGGGAACCCTTCACAATGCAGTCATCAGACAGTGAACTACGGTTCCAGCTCGGTGGAGTCAAGTAGCTACACTTGCATCGGAGCTCCGGAGCAAACTGTGAAACAAGAGATTGATGGGACAAGAAGTTAG

Protein sequence

MGNSNLTSKYNGRSEGSPLDLTNLPEDYIRDGKQIIEDSSSERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTPGGGGGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGSSSVESSSYTCIGAPEQTVKQEIDGTRS
Homology
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BLAST of HG10009927 vs. NCBI nr
Match: XP_038876123.1 (zinc finger protein JAGGED-like [Benincasa hispida])

HSP 1 Score: 319.3 bits (817), Expect = 2.4e-83
Identity = 168/224 (75.00%), Postives = 173/224 (77.23%), Query Frame = 0 

Query: 13  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS------------------------------- 72
           RSEGSPLDL NLPEDYIRDGKQIIEDSS+                               
Sbjct: 2   RSEGSPLDLNNLPEDYIRDGKQIIEDSSTGHRKKKSGLKEGKEEAGKVYECRFCSLKFCK 61

Query: 73  -------------ERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTPGGG 132
                        ERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHT  GG
Sbjct: 62  SQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHT-AGG 121

Query: 133 GGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYP 192
           GG GVG+DSTLPLRFPTRMFSGSSPS+LLPQPPPP LPPSHQPYLYSSPSRPSSFPSYYP
Sbjct: 122 GGSGVGSDSTLPLRFPTRMFSGSSPSSLLPQPPPPPLPPSHQPYLYSSPSRPSSFPSYYP 181

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BLAST of HG10009927 vs. NCBI nr
Match: XP_008465782.1 (PREDICTED: zinc finger protein JAGGED [Cucumis melo])

HSP 1 Score: 313.9 bits (803), Expect = 1.0e-81
Identity = 167/224 (74.55%), Postives = 170/224 (75.89%), Query Frame = 0 

Query: 13  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS------------------------------- 72
           RSEGSPLDL NLPEDYIRDGKQIIEDSSS                               
Sbjct: 2   RSEGSPLDLNNLPEDYIRDGKQIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCSLKFCK 61

Query: 73  -------------ERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTPGGG 132
                        ERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHT   G
Sbjct: 62  SQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHT--AG 121

Query: 133 GGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYP 192
           G G VG+DSTLPLRFPTRMFSGSSP TLLPQPPPP LP SHQPYLY+SP+RPSSFPSYYP
Sbjct: 122 GSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYP 181

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BLAST of HG10009927 vs. NCBI nr
Match: TYK04130.1 (zinc finger protein JAGGED [Cucumis melo var. makuwa])

HSP 1 Score: 310.1 bits (793), Expect = 1.5e-80
Identity = 166/215 (77.21%), Postives = 169/215 (78.60%), Query Frame = 0 

Query: 13  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS------------------------------- 72
           RSEGSPLDL NLPEDYIRDGKQIIEDSSS                               
Sbjct: 49  RSEGSPLDLNNLPEDYIRDGKQIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCSLKFCK 108

Query: 73  ----ERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTPGGGGGGGVGTDS 132
               ERETETLNRARQLVFSNDNLAAQ PPPPHLGCCHSMAPANYHT   GG G VG+DS
Sbjct: 109 SQALERETETLNRARQLVFSNDNLAAQ-PPPPHLGCCHSMAPANYHT--AGGSGSVGSDS 168

Query: 133 TLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYPPPQASINDY 192
           TLPLRFPTRMFSGSSP TLLPQPPPP LP SHQPYLY+SP+RPSSFPSYYPPPQASINDY
Sbjct: 169 TLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDY 228

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BLAST of HG10009927 vs. NCBI nr
Match: KGN51212.2 (hypothetical protein Csa_008797 [Cucumis sativus])

HSP 1 Score: 307.0 bits (785), Expect = 1.2e-79
Identity = 166/224 (74.11%), Postives = 170/224 (75.89%), Query Frame = 0 

Query: 13  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS------------------------------- 72
           RSEGSPLDL NLPEDYIRDGKQIIEDSSS                               
Sbjct: 9   RSEGSPLDLNNLPEDYIRDGKQIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCSLKFCK 68

Query: 73  -------------ERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTPGGG 132
                        ERETETLNRARQLVFSNDNLAAQ PPPPHLGCCHSMAPANYH+   G
Sbjct: 69  SQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQ-PPPPHLGCCHSMAPANYHS--AG 128

Query: 133 GGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYP 192
           G G VG+DSTLPLRFPTRMFSGSSP TLLPQPPPP LP SHQPYLY+SP+RPSSFPSYYP
Sbjct: 129 GSGNVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYP 188

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BLAST of HG10009927 vs. NCBI nr
Match: XP_011655169.1 (zinc finger protein JAGGED [Cucumis sativus])

HSP 1 Score: 307.0 bits (785), Expect = 1.2e-79
Identity = 166/224 (74.11%), Postives = 170/224 (75.89%), Query Frame = 0 

Query: 13  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS------------------------------- 72
           RSEGSPLDL NLPEDYIRDGKQIIEDSSS                               
Sbjct: 2   RSEGSPLDLNNLPEDYIRDGKQIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCSLKFCK 61

Query: 73  -------------ERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTPGGG 132
                        ERETETLNRARQLVFSNDNLAAQ PPPPHLGCCHSMAPANYH+   G
Sbjct: 62  SQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQ-PPPPHLGCCHSMAPANYHS--AG 121

Query: 133 GGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYP 192
           G G VG+DSTLPLRFPTRMFSGSSP TLLPQPPPP LP SHQPYLY+SP+RPSSFPSYYP
Sbjct: 122 GSGNVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYP 181

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BLAST of HG10009927 vs. ExPASy Swiss-Prot
Match: Q9LG97 (Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SL1 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.8e-12
Identity = 78/247 (31.58%), Postives = 105/247 (42.51%), Query Frame = 0 

Query: 13  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS------------------------------- 72
           R EGSPLDL NLP+++   GKQ +E S++                               
Sbjct: 6   RQEGSPLDLNNLPDEF---GKQTVESSTTTAASSAEASRVTKKKSNGGKDEAGKVYECRF 65

Query: 73  --------------------ERETETLNRARQLVFSNDNLAAQPPP----PPHLGCCHSM 132
                               ERETETLNRARQLVF ND+LAA          ++G   + 
Sbjct: 66  CSLKFCKSQALGGHMNRHRQERETETLNRARQLVFGNDSLAAVGAQLNFRDVNMGGGGAA 125

Query: 133 APANYHTPGGGG--GGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYS 192
           AP      GGGG  GGGVG D  +PLR             + P+  PP  PP H  YLY+
Sbjct: 126 APPPTMQMGGGGFRGGGVGGDPCIPLR------------PVQPRLSPPQPPPYHH-YLYT 185

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BLAST of HG10009927 vs. ExPASy Swiss-Prot
Match: Q6S591 (Zinc finger protein JAGGED OS=Arabidopsis thaliana OX=3702 GN=JAG PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.2e-10
Identity = 72/232 (31.03%), Postives = 97/232 (41.81%), Query Frame = 0 

Query: 13  RSEGSPLDLTNLPEDYIRDG-KQIIEDSSS------------------------------ 72
           R E + LDL NLP+D+ +DG KQ +E+ SS                              
Sbjct: 2   RHEENYLDLNNLPDDFSKDGNKQALEEGSSSGQRKKKGSKEGKDESGKVYECRFCSLKFC 61

Query: 73  --------------ERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTPGG 132
                         ERETETLN+ARQLV+ ND +   PP     G  H+  P  Y +   
Sbjct: 62  KSQALGGHMNRHRQERETETLNQARQLVYRNDTIT--PPGISPFGYHHTTDPTIYRSV-- 121

Query: 133 GGGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYY 192
                     + P+ +P     GSS + L+PQPP P  PP   PY YSS        + Y
Sbjct: 122 ---------YSSPMIYP-----GSSSTNLVPQPPMPPPPP---PYPYSS--------NQY 181

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BLAST of HG10009927 vs. ExPASy TrEMBL
Match: A0A1S3CQ11 (zinc finger protein JAGGED OS=Cucumis melo OX=3656 GN=LOC103503384 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.9e-82
Identity = 167/224 (74.55%), Postives = 170/224 (75.89%), Query Frame = 0 

Query: 13  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS------------------------------- 72
           RSEGSPLDL NLPEDYIRDGKQIIEDSSS                               
Sbjct: 2   RSEGSPLDLNNLPEDYIRDGKQIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCSLKFCK 61

Query: 73  -------------ERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTPGGG 132
                        ERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHT   G
Sbjct: 62  SQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHT--AG 121

Query: 133 GGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYP 192
           G G VG+DSTLPLRFPTRMFSGSSP TLLPQPPPP LP SHQPYLY+SP+RPSSFPSYYP
Sbjct: 122 GSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYP 181

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BLAST of HG10009927 vs. ExPASy TrEMBL
Match: A0A5D3BYD4 (Zinc finger protein JAGGED OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2119G00720 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 7.0e-81
Identity = 166/215 (77.21%), Postives = 169/215 (78.60%), Query Frame = 0 

Query: 13  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS------------------------------- 72
           RSEGSPLDL NLPEDYIRDGKQIIEDSSS                               
Sbjct: 49  RSEGSPLDLNNLPEDYIRDGKQIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCSLKFCK 108

Query: 73  ----ERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTPGGGGGGGVGTDS 132
               ERETETLNRARQLVFSNDNLAAQ PPPPHLGCCHSMAPANYHT   GG G VG+DS
Sbjct: 109 SQALERETETLNRARQLVFSNDNLAAQ-PPPPHLGCCHSMAPANYHT--AGGSGSVGSDS 168

Query: 133 TLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYPPPQASINDY 192
           TLPLRFPTRMFSGSSP TLLPQPPPP LP SHQPYLY+SP+RPSSFPSYYPPPQASINDY
Sbjct: 169 TLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDY 228

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BLAST of HG10009927 vs. ExPASy TrEMBL
Match: A0A0A0KTC2 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G372190 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 6.0e-80
Identity = 166/224 (74.11%), Postives = 170/224 (75.89%), Query Frame = 0 

Query: 13  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS------------------------------- 72
           RSEGSPLDL NLPEDYIRDGKQIIEDSSS                               
Sbjct: 5   RSEGSPLDLNNLPEDYIRDGKQIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCSLKFCK 64

Query: 73  -------------ERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTPGGG 132
                        ERETETLNRARQLVFSNDNLAAQ PPPPHLGCCHSMAPANYH+   G
Sbjct: 65  SQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQ-PPPPHLGCCHSMAPANYHS--AG 124

Query: 133 GGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYP 192
           G G VG+DSTLPLRFPTRMFSGSSP TLLPQPPPP LP SHQPYLY+SP+RPSSFPSYYP
Sbjct: 125 GSGNVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYP 184

[Close]
BLAST of HG10009927 vs. ExPASy TrEMBL
Match: A0A5A7U1F5 (Zinc finger protein JAGGED OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00090 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 7.8e-80
Identity = 166/224 (74.11%), Postives = 169/224 (75.45%), Query Frame = 0 

Query: 13  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS------------------------------- 72
           RSEGSPLDL NLPEDYIRDGKQIIEDSSS                               
Sbjct: 49  RSEGSPLDLNNLPEDYIRDGKQIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCSLKFCK 108

Query: 73  -------------ERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTPGGG 132
                        ERETETLNRARQLVFSNDNLAAQ PPPPHLGCCHSMAPANYHT   G
Sbjct: 109 SQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQ-PPPPHLGCCHSMAPANYHT--AG 168

Query: 133 GGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYP 192
           G G VG+DSTLPLRFPTRMFSGSSP TLLPQPPPP LP SHQPYLY+SP+RPSSFPSYYP
Sbjct: 169 GSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYP 228

[Close]
BLAST of HG10009927 vs. ExPASy TrEMBL
Match: A0A6J1I6U1 (zinc finger protein JAGGED-like OS=Cucurbita maxima OX=3661 GN=LOC111470498 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 1.1e-68
Identity = 152/227 (66.96%), Postives = 161/227 (70.93%), Query Frame = 0 

Query: 13  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS------------------------------- 72
           RS+GSPLDL NLPEDYIRD KQIIED+S+                               
Sbjct: 3   RSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCK 62

Query: 73  -------------ERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTPGGG 132
                        ERETETLNRARQLVFSNDNLA Q  PPPHLGCCHSMAP +YHT    
Sbjct: 63  SQALGGHMNRHRQERETETLNRARQLVFSNDNLAVQ-SPPPHLGCCHSMAPGSYHT---A 122

Query: 133 GGGGVGTDSTLPLRFPTRMFSGSSPSTLL-PQPPPPTLPPSHQPYLYSSPSRPSSFPSYY 192
           G GGVG+D TL LRFPTRMF GSSP+TLL P P PP  PP HQPYLYSSPSRPSSFPSYY
Sbjct: 123 GSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYY 182

[Close]
BLAST of HG10009927 vs. TAIR 10
Match: AT1G68480.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 67.4 bits (163), Expect = 1.5e-11
Identity = 72/232 (31.03%), Postives = 97/232 (41.81%), Query Frame = 0 

Query: 13  RSEGSPLDLTNLPEDYIRDG-KQIIEDSSS------------------------------ 72
           R E + LDL NLP+D+ +DG KQ +E+ SS                              
Sbjct: 2   RHEENYLDLNNLPDDFSKDGNKQALEEGSSSGQRKKKGSKEGKDESGKVYECRFCSLKFC 61

Query: 73  --------------ERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTPGG 132
                         ERETETLN+ARQLV+ ND +   PP     G  H+  P  Y +   
Sbjct: 62  KSQALGGHMNRHRQERETETLNQARQLVYRNDTIT--PPGISPFGYHHTTDPTIYRSV-- 121

Query: 133 GGGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYY 192
                     + P+ +P     GSS + L+PQPP P  PP   PY YSS        + Y
Sbjct: 122 ---------YSSPMIYP-----GSSSTNLVPQPPMPPPPP---PYPYSS--------NQY 181

The following BLAST results are available for this feature:
BLAST of HG10009927 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038876123.12.4e-8375.00zinc finger protein JAGGED-like [Benincasa hispida][more]
XP_008465782.11.0e-8174.55PREDICTED: zinc finger protein JAGGED [Cucumis melo][more]
TYK04130.11.5e-8077.21zinc finger protein JAGGED [Cucumis melo var. makuwa][more]
KGN51212.21.2e-7974.11hypothetical protein Csa_008797 [Cucumis sativus][more]
XP_011655169.11.2e-7974.11zinc finger protein JAGGED [Cucumis sativus][more]
BLAST of HG10009927 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LG971.8e-1231.58Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SL1... [more]
Q6S5912.2e-1031.03Zinc finger protein JAGGED OS=Arabidopsis thaliana OX=3702 GN=JAG PE=1 SV=1[more]
BLAST of HG10009927 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CQ114.9e-8274.55zinc finger protein JAGGED OS=Cucumis melo OX=3656 GN=LOC103503384 PE=4 SV=1[more]
A0A5D3BYD47.0e-8177.21Zinc finger protein JAGGED OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... [more]
A0A0A0KTC26.0e-8074.11C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G372190 P... [more]
A0A5A7U1F57.8e-8074.11Zinc finger protein JAGGED OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff... [more]
A0A6J1I6U11.1e-6866.96zinc finger protein JAGGED-like OS=Cucurbita maxima OX=3661 GN=LOC111470498 PE=4... [more]
BLAST of HG10009927 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G68480.11.5e-1131.03C2H2 and C2HC zinc fingers superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availablePANTHERPTHR45730ZINC FINGER PROTEIN JAGGEDcoord: 42..198
IPR031113Zinc finger protein JAGGED-likePANTHERPTHR45730:SF32ZINC FINGER PROTEIN JAGGEDcoord: 42..198

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10009927.1HG10009927.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007275 multicellular organism development
biological_process GO:0009451 RNA modification