HG10009925 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10009925
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Reverse transcriptase domain-containing protein
Location	Chr06: 14391242 .. 14400766 (-)
RNA-Seq Expression	HG10009925
Synteny	HG10009925

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGATCAAACATTCAAATTTTTTACCTTTTTTGGATGAATGGTGGAACAGCCATCAACACTCTAGAAGGCCGGGTCATGGGCTCATTCAAAAACTTAAGAAATTGAAGGTTGCCTTAAAAGAATGGAAGATCAACACCTTTGGGTTTATTGAATCACAGAAAGATGCATTATTAAAGGAATTGGCTCTTATTGACAAAATGGTTGAATCAAACTCCACCACGGAGTCCCTTAACAGTCGTCGTTTATCTATCAAAGGTGATCTTCTCGAAACGAGGAATTGAAATGAGGCAAAAATGCAAAACAAAATGGCTCTTAGAAGGTGATGAGAACACAACTTTCTACCACAAGTTTGCTGCAAAAAAAAAAAAAGGAAGAACAGCATCACTGAGATCCTAGGCGACCAAAACCACAGTTTGACTAGTGACTTTCAGATTTGAGGCTGAATTTATCACTTTTTACGAGGCCCTCTTCACCAAAAAACAGGGCACCAGATTTCTACCACAGCCAATGGATTGAGCCCCTATGAGCAATCTTCAAAGACAGTCTCTGGAAAGACCCTTCAATGAGGAGGAGATTTGGCAAGCGGATAAGGATTTGGGCTCCACCAAATCCCCGGGACCGGATGGTTATGTTATAATATGTATTTATTGTATAGTTGTCCTTTATTGTAATTTTACATTCTCTAGATTAGGGTTTCCATCTTGCCTATATAAATATGTACCTTTAGTCTGATTAATAATATAGAGATTATTCTCCAAAGTATAGAGTACATGGTATCAGAGCCCTCTAGAGTTTAGAATATTCGTTTGACGGCTACGTTCTCACAAAGCTAGGGTTTCGTTTTTGGTCATCGAGTTTGAGTGGCCTTTTGTCTACACCGCCCACCTCAGGAGGAGAGCCGCCACCATCTGTCTTCGTCGTTCGCCGAAAAACGCCGCGCGTGAGCCTCACGCGCCACCAAGAAGAGTCTGCTCCGTCGTCACGCGTCGGCGCGTGTGAGCGAGTGGGAGCTCCATTTCCGATTCCGTCAGTTGGGTTCGTCTCGGTTTCTGTTTTCCAACCAATCTGTGCGTTTGGTTCCATCGAAATCCACTCGGGTGTGAGGTTATTTGAAAAATACCTTTTTTGTTCTTAGGGTTTGTGACTGTTTTGTTCTAATTTGGGGCTTTTTTTTTATTTTGCTCTTTGATTCACCTTGCTCTTGCTTTTATTCCGCTTGTGAGATATACGAATTGTGTGTTAGTTCATAATGGCTGAGCTGAAGCATATCACGTCTAGTGTAATTCCCCTAACATCAAAGATAACAGAACACAAGTTAAATGAATCTAATTACTATGATTGGCGTATAACGATTCAGTTTTATTTACTTAGTACTGATATGGATGATCATATGACTGAGGATCCACCAAAAGATGACAAGAAAAAGGGTTGGCTTCGCGATGACGCTGGACTTTATCTTCAGATTAAGAACTCCATTGAGAGTGAGGTCGTTGGCTTGGTGGATCATTGTAATTCGGTGAAGGAACTTTTGGAGTTCTTAGAATTTCTATACTTTAGAAAAGAACACGTCCATGGGATGTTTGACATTTGCATGCAATTCTTTCGAGCCGAACAGAAAGCAGAATCTGTTACAAGTTATTTTATGAGACTTAAGAAGACAGATGCTGAACTTGCTTTATTATTACCTTTTAGCCCAGATGTCCAAGTTCAACAAGCTCAACGGGAAAATATGGCTGTTATGATATTTCTGAATGGACTTTCACCTGAATTTGGAATGGCTAAAATACAGATTCTTTCTGATTCTGAAATTTCGTCATTAGACGACGCCTTCAGTCATGTTCTTCGTGTTGAGAGTTCTCAATCTGGTTCGTCCATGTCTCAACCTAGCAGTGCCTTTATAAGCAAGAATGATAACTCCCGAGCTACTTCAGGGATGACCAACAATTTTCAGAAGCCTAGTTATGATAGTCGAAAATCAAATTCTCAGGAGATCGTCTATCATTATTGTCGAAAGTCAGGACATCTAAAACGTGATTGTAGAAACTTATTGTATAGACTCAAAGATCTCAGCATGCTCACATAGCTTCCACCAATGATATGACTGAGAAGTCTGTTACCATCTCTGCCGACGACTTTGCTAAATTCTAAGTGTTACAAGAATCCCTACAGGCATCTTCTTCATCGACTCCTATTGCCACCATTGCTGAGACAGGTAATACAAAATGTCTCCTTACATCATCTACAAAATAGGTCATAGACTCTGGTGCCACCGCTCATATGACAGGTAATTCTAACTTGTTTTCTCCCCCTCTGTCCCCTGCCTCATCCCCATCTGTCACTTTGGCAGATGGTTCAACCTCCTCTGTTCTTGGATCCAGCACCATTCATCTCACCTCATCCCTTTCTTTGTCCTCTGTGTTACATTTGCCTCAATTGTCTTTTAATTTAATCTCTATTAGCCAACTTACTCGTGACCTTAACTGTTGTGTCTCGTTTTTTCCTGGTTATTGCTTGTTTCAGGATCGTATGGCGAAGAAGATTATTTCAAATCCTTACAACCGCCCATCACTGGGAAAATGTTTTCGTTGTGGCCAACAAGGACATCTTTCTAATGAATGTCCTCAAGGAAGAACTTTAACTATTCAAGAAGAAGATACTTCTGTAGAAGAGAATCTTGAAATCGATTGTGATGACAACTTGGCTTACTTGGAATCTGATGAGGGTGATCATCTCTCATGTGTTATCCAAAGAGTCTTACTTACTCCTAAAACGGAAAGTCATCCTCAACGACATTCTTTGTTTCGCACGAGATGCACTATAAATGGTCGAGTTTGCCAAATGATAATCGATAGTGGAAGCAGTGAAAATATTGTGTCCAAGAAACTCGTATCTGCTCTAAATTTAAAGGTTGAACCACATCCAAATCCCTACAAGGTTAATTGGATTACAAAGAAAGGAGAAACTTCAGTCCAAGAAATTTGCACGATACCAATTACCATAGGTAATACATATCAAGCTCAAATTCCTGGTGACGTCTTAGACATGGATGTCTATCAAGTCCTTTTGGGACGACCTTGGTAGTACGATAACAAAACCCTCCACAATGGTAGGGACAACACATATGAATTCACTTGGATGGGCAAGAAAGTAATCCTCCTTCCGTTGGGTAAGTCTACTACGATAAACAAGGTACATTCTTCTCCTAAAAAGCAACTTTTTTTATTTCTTTTGGTAAAGATCTCCTCCAAACAAAAAATCAGACTCTTCTAGCTTTTGTTGTCAAAAAATACCCTTTAGAGTCCCAAAACCACGACCTTTTGGACCCACAAATCTCAACTTTACTTACAGAATTTCCCTCACTTATAGAAGAACCACAAAGCTTACCTCCTTTACGAGATATCCAACACCACATAGATTTAATACCTAGAAGTACTCTACCGAATCTACCCCACTACCGAATGAGTCCTAGAGAATATGAAGCTCTCCACGACCACATCCATACCTTACTAGATAAAGGTCACATCCAACCTAGCCTTAGTCCTTGTGTCGTACCAGCATTACTAGCACCTAAAAAGGATGGCTCTTGGCGACTTTGTGTAGATAGTAGGGTCATTAACAAGATCACTATAAAATATAGATTTCCTATTCCCCGACTATCTGATTTACTAGACCAATTAGGTGGAGCATCCATTTTTTCCAATATAGATTTAAGAAGTGGATATCACCAAATTAGGATACTCCCTGGGGACGAGTAGAAAACAGCCTTTAAAACAAATGAAGGTCTTTTTGAGTGGTTAGTAATGCCTTTTGGTCTTTCAAATGCTCCAAGCACCTTTATGCGTTTAATGAATCAAGTTTTATTACCTTATTTAAACAAATTTGTTGTAGTTTATTTCGATGATATTTTAATTTACAGCACTAACCATACCTCACATTTAGAACATTTAAAAACAATTTTCCAAGTCCTAAAAGACAATGCTTTATTTATAAATTTAAAAAAATGTTCTTTCTTGCAAACTCAAATTTACTTTCTTGGCTTTTTAATTCATTCTAAAGGGATTAGTGTAGACCCAAGAAAAATAGAAGCTATCTTAGATTGACCTCAACCAAGGAACCTTAAGGAAATTCGGAGTTGTTTAGGATTAGCATCATTCTATAGAAAGTTTATTCAAAATTTCAGTACTATTGCTAGTCCTTTGACTGAATGCCTAAAAACTAAAGTTTCTTTCTCTTGGGGTAGAGCTCAAAATAACAGTTTTGAAGAACTCAAAAAAGCTTTAAGTTCCACTCCAGTTCTTGGTTTTCCAAATTTTCAAAAACCTTTTGGAGTTTCGGTTGATGCTTCTGGAGTAGGAATTGGAGCTGTCCTTAGCCAAGAAAAACATCCTATTGAATTCTTTAGTGAGAAACTTAGTTCTTCTAGACAAAAATGGTCCACTTATGAGCAAGAACTTTACTCCTTAGTTCGAGCACTTAAGCAATGGGAACACTATCTCCTTGGAAAAGAATTCGTTTTATTAACTGATCATTTTTCTTTGAAATTTTTGCATTCTCAAAAAACTATTAGTCACATGCATGCTCGTTGGATCCAATTCCTCCAAAGGTTCGACTTTGTCATCAAGCATACTCCAGGTAACATCAACAAAGTTGCAGATGCCTTAAGTCGAAAAGGTACTCTTCTTACTTTACTTCAAAGTGAAATTGTGGCTTTTAATCATTTGTATGAACTTTATCCTACTGATGAGGATTTCAAAGATATTTGGAATGCTTGCTCTAATCATCTCCCGGCAAAAGATTTTCATATTTTTTATTGCTTTCTCTTTAAAAATGACACTTTATGCATCCCACACACATCCTTACGGGAGTCACTTTAAAAGAAGCACATTCTAATGGATTGGCTGGCCACTTTTGATAAGGTAATCCTAACCCTCAGCCCAAAGATCCAAGCTATTGATAAGCAGGAACCTTTGAAACTAAGAAATTAACACCTCCCTATACGAATTTAGATAACCCCGAGAAAAAGGCTAGAATAAGATTACCTCTTGATCGAAGATCTAGAAGCAAGATTCGGAAATCTTGTTCTAAATTGAGTCACTCCACAATCAAACTTGATCAAGGTTAGATTGAATGGCTCGCATGCATTCTATCACAAGAATTGAAAATTCTATGGGAAAAGTCTCAATGTGAGATTTCAAATTTCATTCATCAAAAGTTTTGTTACAAATGAATGGGGTAGAAGGCTTTATATAGCCTTGTAGAGATTCTATCCTATTTAATGTAAATTCCAAAAAGTCAAAATAAAACATTAAAGGAATTATCTTCTCAACTTCCATCTTCCAAACCATCTTCAATGCATCCCCCATAATTACCAAGACTTAAATTTAACACTTACAAGCAAGAAATTAATTAAAGAAAATAAATAACTCATAAAATTAAAATGCTGAAAATTAATTAAAAACAACTAAGGTTTACTAATGCAACTCATAGGTCCTGATCCATATCAACTTTGATCGGGATAAAACCTTATCTCTTCTTTCTTCTAAATTCTTTTGGCCTCAATTAAAAAAAGATGTTGCTAACTTTGTTAAAAGATGTTACATATGTCAAACTTCTAAAGGATCTAGTTCTAACCAAGGACTTTATTCTCCTCTACCTATTCCACAAAATATTTGGGAGGACCTCTCTATGGATTTTGTCCTTGGTTTACCTAGAACTCAAAGAGGTTATGATTCAGTTTTAGTAGTTGTTGATAGATTTAGCAAAATGGCACACTTTCTAGCTTGTAAAAAGACTAATGATGTCTTGCATGTGGCCAACCTATTCTTTAAGGAAATTGTCCCACTACATGGTATACCTAAGAGTATAGTTTCTGATAGGGATGTTAAATTCATGAGTTTCTTTTGGCGATCGTTGTGGAAAAAATTCAGTACTAATCTTCTTTTTAGTTCTACTAGTCATCCACAAACTGATGGACAAACTGAGGTAACAAATCGCACTCTTGGTAACCTCTTACGTTGTCTTAGTGGAGATAAGTCGCGCCAATGGGACCTCGCACTGGTTCAAGCAGAGTTTGTCTTCAACAACATGGTGAACCGATCTACAGGGAAGTGCCCCTTTGAAGTAGTTTATACTCACACCCCTTGGTTAACCTTTGATCTTGCTAACTTACTTGTTTCTATTGATCTTAGTGTTGAAGCATCTATTATGGTTGAGAGGATCAAAACTATTCATGAAGAAGTTCAAGCTAAACTCGAACGAGCTAATGCCTCCTACAAACACATTGCTGACGCTCACAGACGACCAGTCAGTTTTCAGGTCGGTGACCTTGTTATGATTCACTTAAAGAAGTCTAGCCTGCCGTCAGGTTCCCATTCTAAGCTCACTAATAAGAAGATTGGACCAATCCCTATCTTGGCGAAATTTGGCTCAAATGTCGTTCAACTTGATTTACCACCCACATTGAAGATAAGCTCTACGTTCAATGTCTCAGATATCTACCATTATCATCCTCCTGATCAGTTTAACATCGCTTAGTCCAACTCAAAGACGGTTTGTTCTTCTTGGGGGGATAGACTTGACGTATATTGTTGGTCTTGATTTAGTTTATTTGTTTACCTTTTCCTTTTGTTAGTTTTGTTTTTAAGTGTAACCGGTTGTCTAGGTTATGGTAACCGGTTGACCTATTGGTTTAGGGTATAAATAACCTTTGTTATCCTCTTATTTCATTCATTAAAAAAGATTCTCAAAGGTTTTCTTGGAGCTTTTCTTGGAGCTACATCAGCTATGGCACAATTTGTGTGTGAAATAGTGTAGATACACCAACTTTTATCTGAGATGGGCTTCAATGTTACCGTGTCAACTAAATTATGGTGTGATAATCAAGCTCTACTTCACATTGCATCCAACCCAGTGTTTCATGAACGAACTAAACATATTGAAGTGCATTATCATTTCATTCGCGAGAAAATACAAGGGTTGATATCTACAATATATGTGAAGAGTGGAGAACAGTTGCGAGATATCCTTACCAAAGTTGTAAACGAAGCAAGAAAAAGTTATCTATGCAACAAGCTGGGCATGATTGACATATTTGCTCCAACTTGAGGAGGAGTGTTATAACATGTATTTATTGTATAGTTGTCCTTTATTGTAATTTTACATTCTCTAGATTAGGGTTTCCATCTTGCCTATATAAATATGTACCTTTAGTTTGATTAATAATATAGAGATTATTCTCTAAAGTACAGAGTACAGGTTACACTTTTGAATTCTTTAAAAAGTCTTGGAACATCCTAAAAGATGACATTGTTAGAGTGTTCCAAGAATTTTTTCAGAAGGGTATTATAAATAAAAATTCAATGAAACATACATTTGTCTCATTCCAAAGAAATTAGATGCTAGGAAAGTGGGGAACTATAGACCCATAAGCCTCACCATGGGGTTATACAAAATCATTGCTCGTGTTCTCTCAAATAGGTTGAAGAAAGTGTTTCCCCCCACTATCATGGATTACCAATCCGCCTTTGTTGAAAGTAGACAGATTTTGGACGCCTCACTCTTGGCAAACGAAACATCAAGGAATGGCATAGGAAAAATGCTCAAGGGGTGGTCCTTAAACTTGATGTGGAGAAGGCTTTTCAAAAGGTTGATTGGGATGACCTTGATGAGATTTTAAAAGTCAAAGGGTTTGGGCACAAATGGAGACAATGGATTAGTGGTTGTGTTTCGTCCACAAATTTCTCTATAATCATCAATGACAAACCAAGAGGAAAGATTCTCGCATCTAGGGGCCTTCGACAAGGTGACCCATTGTCCCCATTTCTATTCATTATGGTGATGGATGCTCTCAATAGAATCTTATTGATTGCCGCATTGAATGGATACGCCTCGAACAACAATTCCCTACACATAAATCGCCTCTTATTTGCTAATGACACCATTTTCTTCTCAACAAACGATGAAGAAAAGATCGATAATCTCATCAACTTGGTCAGTTTTTTTAGGAAGCTTCTGGCCTTAATATCTACAGACAAAAATCAGAATTCCTGGGTATTAATTGTGATGATGTTTGGGTGGAAAACATTGCTGCAGATTATGATTGTAAAATTGGCTGCTGGCCATCTGCATATTTGGGCTTTCTCTACATGGCAAACCTTCCTCACCAACCTTTTGGCAAACCATCATGGACAAGATTGAGAAGAGAATTTCATCATGGCAACACAACTTCCTTTCTAAAGGAGGTAGACGTCTCTTAAATGCCACCCTCTCTAATTTAACTTTATATTACTTATCCATGTTTAAAGCCCCAACAAAAGTGGCAGCAAGTATCGAAAGGTGTTTTCAAAAGTTTCTGTGGACTGGTTATAGAAACAGCTCCCCTCCCACCTTCTCTGTTGGGACATTCATAAATTCCCTCTAGATGAGGGTGGTCTTGGCATTGGAGATATCAGAAAACGAAACAATTCATTATTGGCAAAGTGGATATGGTGTTTCAAACACGAAAGATGGGCTCTAGGGAGGAGATTCATCAAGGCTAAATATGGGTCAAGTCATTACGGTCAACTCCCTTCCACCATTCGGCATACATCTTTAAGAAGTCCATGGTGCAACATTTTGAAGGTAAAGGACCATGTCTGTAGCAATATATTAATCAAAGTTGGAAATGGACAGTCCACATCCTTGTGGAATGATCAGTGGATTGGAACTTCTCCCCTCAAAATTAGTTTCCAAAAGCTATTCGCCATTCCTAAACAAAGGATGCAACCATTGCGGAGGTTTGGGACTCTACGAATGAGTCCTGGACCCTTAATTTTAGAAGACATTTGAAAGATGATGAGATTTGTGAATGGGCTTTTTTTAGTTAGAATGTTCCCAGCATCCATTTATCTAATCAACAGGATAGTTGGATATGGCAGCTTGAAAAGAGTGGCGTTTTCTCTACCAAATCACTGATGTACCACTTAACCACGACATCGTTCTCTGACCAATCTGGATTATTCAAAAAGATATGGAAGCTTCCATGTCCTAAAAGAGTTAAATTCCTATTGTGGGAAGTGGGTCATTCTTGCCTCAATACTACGGACAGACTACAAGTCAGATGCCCTTGGATTAGCTTATCCTCATCATGGTGCTGCCTTTGTCATGAATCAAATGAATCTATCCATCATTTACTTCTCCATTGCAAATTTACCAGAGTTGTATGGAATGAAATCTTTAGTGCCTTTGGATGGACCACCGTGCCTCCTCAACATGTTTTTGACTGGCTCAGCATGACACTTATCGACCACCCTTTCAATGCCACTAAAGGAGTTGTTTGGTCTAGTATCATTTGTACGGTGATATCAAAGGTTTGGGAAGAGAGGAACGCGAGGATTTTCAAAGATACATCCAAGTCCACAAATAAAGTGCTTGAATTATCCATTTTCAACGCAATCTTTTGGTGTAAAAATTTACTTCCCCTCAAAGATTACAGTTTATCTTTTCTTGTTGCTAATTGGAACAACCTTTTGTATTCCCTATAA

mRNA sequence

ATGTGGATCAAACATTCAAATTTTTTACCTTTTTTGGATGAATGGTGGAACAGCCATCAACACTCTAGAAGGCCGGGTCATGGGCTCATTCAAAAACTTAAGAAATTGAAGGTTGCCTTAAAAGAATGGAAGATCAACACCTTTGGGTTTATTGAATCACAGAAAGATGCATTATTAAAGGAATTGGCTCTTATTGACAAAATGGTTGAATCAAACTCCACCACGGAGTCCCTTAACAGTCGTCGTTTATCTATCAAAGATTATGATTGTAAAATTGGCTGCTGGCCATCTGCATATTTGGGCTTTCTCTACATGGCAAACCTTCCTCACCAACCTTTTGGCAAACCATCATGGACAAGATTGAGAAGAGAATTTCATCATGGCAACACAACTTCCTTTCTAAAGGAGAAACAGCTCCCCTCCCACCTTCTCTGTTGGGACATTCATAAATTCCCTCTAGATGAGGGTGGTCTTGGCATTGGAGATATCAGAAAACGAAACAATTCATTATTGGCAAAGTGGATATGGTGTTTCAAACACGAAAGATGGGCTCTAGGGAGGAGATTCATCAAGGCTAAATATGGGTCAAGTCATTACGGTCAACTCCCTTCCACCATTCGGCATACATCTTTAAGAAGTCCATGGTGCAACATTTTGAAGGATAGTTGGATATGGCAGCTTGAAAAGAGTGGCGTTTTCTCTACCAAATCACTGATGTACCACTTAACCACGACATCGTTCTCTGACCAATCTGGATTATTCAAAAAGATATGGAAGCTTCCATGTCCTAAAAGAGTTAAATTCCTATTGTGGGAAGTGGGTCATTCTTGCCTCAATACTACGGACAGACTACAAGTCAGATGCCCTTGGATTAGCTTATCCTCATCATGGTGCTGCCTTTGTCATGAATCAAATGAATCTATCCATCATTTACTTCTCCATTGCAAATTTACCAGAGTTGTATGGAATGAAATCTTTAGTGCCTTTGGATGGACCACCGTGCCTCCTCAACATGTTTTTGACTGGCTCAGCATGACACTTATCGACCACCCTTTCAATGCCACTAAAGGAGTTGTTTGGTCTAGTATCATTTGTACGGTGATATCAAAGGTTTGGGAAGAGAGGAACGCGAGGATTTTCAAAGATACATCCAAGTCCACAAATAAAGTGCTTGAATTATCCATTTTCAACGCAATCTTTTGGTGTAAAAATTTACTTCCCCTCAAAGATTACAGTTTATCTTTTCTTGTTGCTAATTGGAACAACCTTTTGTATTCCCTATAA

Coding sequence (CDS)

ATGTGGATCAAACATTCAAATTTTTTACCTTTTTTGGATGAATGGTGGAACAGCCATCAACACTCTAGAAGGCCGGGTCATGGGCTCATTCAAAAACTTAAGAAATTGAAGGTTGCCTTAAAAGAATGGAAGATCAACACCTTTGGGTTTATTGAATCACAGAAAGATGCATTATTAAAGGAATTGGCTCTTATTGACAAAATGGTTGAATCAAACTCCACCACGGAGTCCCTTAACAGTCGTCGTTTATCTATCAAAGATTATGATTGTAAAATTGGCTGCTGGCCATCTGCATATTTGGGCTTTCTCTACATGGCAAACCTTCCTCACCAACCTTTTGGCAAACCATCATGGACAAGATTGAGAAGAGAATTTCATCATGGCAACACAACTTCCTTTCTAAAGGAGAAACAGCTCCCCTCCCACCTTCTCTGTTGGGACATTCATAAATTCCCTCTAGATGAGGGTGGTCTTGGCATTGGAGATATCAGAAAACGAAACAATTCATTATTGGCAAAGTGGATATGGTGTTTCAAACACGAAAGATGGGCTCTAGGGAGGAGATTCATCAAGGCTAAATATGGGTCAAGTCATTACGGTCAACTCCCTTCCACCATTCGGCATACATCTTTAAGAAGTCCATGGTGCAACATTTTGAAGGATAGTTGGATATGGCAGCTTGAAAAGAGTGGCGTTTTCTCTACCAAATCACTGATGTACCACTTAACCACGACATCGTTCTCTGACCAATCTGGATTATTCAAAAAGATATGGAAGCTTCCATGTCCTAAAAGAGTTAAATTCCTATTGTGGGAAGTGGGTCATTCTTGCCTCAATACTACGGACAGACTACAAGTCAGATGCCCTTGGATTAGCTTATCCTCATCATGGTGCTGCCTTTGTCATGAATCAAATGAATCTATCCATCATTTACTTCTCCATTGCAAATTTACCAGAGTTGTATGGAATGAAATCTTTAGTGCCTTTGGATGGACCACCGTGCCTCCTCAACATGTTTTTGACTGGCTCAGCATGACACTTATCGACCACCCTTTCAATGCCACTAAAGGAGTTGTTTGGTCTAGTATCATTTGTACGGTGATATCAAAGGTTTGGGAAGAGAGGAACGCGAGGATTTTCAAAGATACATCCAAGTCCACAAATAAAGTGCTTGAATTATCCATTTTCAACGCAATCTTTTGGTGTAAAAATTTACTTCCCCTCAAAGATTACAGTTTATCTTTTCTTGTTGCTAATTGGAACAACCTTTTGTATTCCCTATAA

Protein sequence

MWIKHSNFLPFLDEWWNSHQHSRRPGHGLIQKLKKLKVALKEWKINTFGFIESQKDALLKELALIDKMVESNSTTESLNSRRLSIKDYDCKIGCWPSAYLGFLYMANLPHQPFGKPSWTRLRREFHHGNTTSFLKEKQLPSHLLCWDIHKFPLDEGGLGIGDIRKRNNSLLAKWIWCFKHERWALGRRFIKAKYGSSHYGQLPSTIRHTSLRSPWCNILKDSWIWQLEKSGVFSTKSLMYHLTTTSFSDQSGLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPWISLSSSWCCLCHESNESIHHLLLHCKFTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHPFNATKGVVWSSIICTVISKVWEERNARIFKDTSKSTNKVLELSIFNAIFWCKNLLPLKDYSLSFLVANWNNLLYSL

Homology

[Close]

BLAST of HG10009925 vs. NCBI nr
Match: CAN75040.1 (hypothetical protein VITISV_026478 [Vitis vinifera])

HSP 1 Score: 177.6 bits (449), Expect = 2.3e-40
Identity = 130/475 (27.37%), Postives = 196/475 (41.26%), Query Frame = 0


Query: 35   KLKVALKEWKINTFGFIESQKDAL--LKELALIDKMVE------SNSTTESLNSRRLSIK 94
            + +V+L ++  +T  F ++  + L  LK + L+   V         ST   +N+R+  + 
Sbjct: 1300 RTRVSLLQFADDTIFFSKASMEHLQNLKIILLVFGQVSGLKINLEKSTISGINTRQELLS 1359

Query: 95   D----YDCKIGCWPSAYLGFLYMANLPHQPFGKPSWTRLRREFH---------HGNTT-- 154
                 +DC++  WP +YLG     N     F  P   R+ R             G  T  
Sbjct: 1360 SLASVFDCRVSEWPLSYLGLPLGGNPKTIGFWDPVVERISRRLDGWKKAYLSLGGRITLI 1419

Query: 155  ---------SFLKEKQLPS------------------------HLLCWDIHKFPLDEGGL 214
                      FL   ++P+                        HL+ W++   P + GGL
Sbjct: 1420 QSCLSHIPSYFLSLFKIPASIASKIEKMQRNFLWSGAGEGKKDHLVRWEVVSRPKELGGL 1479

Query: 215  GIGDIRKRNNSLLAKWIWCFKHERWALGRRFIKAKYGSSHYGQLPSTIRHTSLRSPWCNI 274
            G G I  RN +LL KW+W F  ER  L  + I + YG+   G   + +   S R PW  I
Sbjct: 1480 GFGKISLRNIALLGKWLWRFPRERSGLWYKVIGSIYGTHPNGWDANMVVRWSHRCPWKAI 1539

Query: 275  LK---------------------------DSWIWQLEKSGVFSTKSLMYHLTTTSFSDQS 334
             +                           DS  W L  SG+F+ KS    L+  S     
Sbjct: 1540 AQVFQEFSPFVRLVVGNGERIRFWEDLWWDSRAWSLSSSGLFTVKSFFLALSKVSNPILF 1599

Query: 335  GLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPWISLSSSWCCLCHESNESIHHL 394
               K +W    P +VK L W V H  +NT D+LQ+R P+ SL   WC LC  + ESI HL
Sbjct: 1600 LPAKFLWSSKVPSKVKALAWIVAHGKVNTNDKLQLRRPYKSLCPQWCILCKGNGESIDHL 1659

Query: 395  LLHCKFTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHPFNATKGVVWSSIICTVISKV 427
             LHC  T  +WN++F   G   VPP+   D L +       +     +W     T++  V
Sbjct: 1660 FLHCPVTIGLWNKLFKLAGLDWVPPRSFEDMLVIAFKGLGNSLRGKTLWQVACLTLVWIV 1719

[Close]

BLAST of HG10009925 vs. NCBI nr
Match: RVX15530.1 (putative ribonuclease H protein [Vitis vinifera])

HSP 1 Score: 169.1 bits (427), Expect = 8.3e-38
Identity = 97/307 (31.60%), Postives = 141/307 (45.93%), Query Frame = 0


Query: 142  HLLCWDIHKFPLDEGGLGIGDIRKRNNSLLAKWIWCFKHERWALGRRFIKAKYGSSHYGQ 201
            HL+ W++   P + GGLG G I  RN +LL KW+W F  ER  L  + I + YG+   G 
Sbjct: 1038 HLVRWEVVSRPKELGGLGFGKISLRNIALLGKWLWRFPRERSGLWHKVIVSIYGTHPNGW 1097

Query: 202  LPSTIRHTSLRSPW---CNILKDSWI-----------------------WQLEKSGVFST 261
              + +   S R PW     + ++  +                       W L  SG+FS 
Sbjct: 1098 DANMVVRWSHRCPWKAIAQVFQEFSLFVRLVVGNGERIRFGKIFGGILEWSLSSSGLFSV 1157

Query: 262  KSLMYHLTTTSFSDQSGLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPWISLSS 321
            KS    L+  S        K +W    P +VK L W V H  +NT D+LQ+R P+ SL  
Sbjct: 1158 KSFFLALSKVSNPILFLPAKFLWSSKVPSKVKALAWIVAHGKVNTNDKLQLRRPYKSLCP 1217

Query: 322  SWCCLCHESNESIHHLLLHCKFTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHPFNAT 381
             WC LC  + ESI HL L+C  T  +WN++F   G   VPP+   D L +       +  
Sbjct: 1218 QWCILCKGNGESIDHLFLYCPVTIGLWNKLFKLAGLDWVPPRSFEDMLVIAFKGLGNSLR 1277

Query: 382  KGVVWSSIICTVISKVWEERNARIFKDTSKSTNKVLELSIFNAIFWCKNLLPLKDYSLSF 423
               +W     T++  VW+ERN RIF+D  +S   + +L +F +  W       +   L+ 
Sbjct: 1278 GKTLWQVACLTLVWIVWQERNNRIFEDKGRSEETLWDLILFYSTLWASCFAAFRGVPLNV 1337

[Close]

BLAST of HG10009925 vs. NCBI nr
Match: RVW67766.1 (hypothetical protein CK203_065561 [Vitis vinifera])

HSP 1 Score: 167.5 bits (423), Expect = 2.4e-37
Identity = 93/260 (35.77%), Postives = 128/260 (49.23%), Query Frame = 0


Query: 142  HLLCWDIHKFPLDEGGLGIGDIRKRNNSLLAKWIWCFKHERWALGRRFIKAKYGSSHYGQ 201
            HL+ WD+   P + GGLG G+   RN +LL KW+W F  ER  L  + I + YG+   G 
Sbjct: 824  HLIKWDVVSRPKELGGLGFGNTSLRNIALLGKWLWRFPRERSGLWYKVIASIYGTHPNGW 883

Query: 202  LPSTIRHTSLRSPWCNI-------------------LKDSWIWQLEKSGVFSTKSLMYHL 261
              + +   S + PW  I                   L DS  W L  SG+FS KS    L
Sbjct: 884  DANMVVRWSHKCPWKTIAQVFQRLMSSLSSVLFSPFLADSRAWSLSSSGLFSVKSFFLAL 943

Query: 262  TTTSFSDQSGLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPWISLSSSWCCLCH 321
            +  S        K +W    P +VK L W V H  +NT D+LQ+R P+ SL   WC LC 
Sbjct: 944  SKVSNPILFLPAKFLWSSKSPSKVKALAWLVAHGKVNTNDKLQLRRPYKSLCPQWCILCK 1003

Query: 322  ESNESIHHLLLHCKFTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHPFNATKGVVWSS 381
             + ESI+HL LHC  T  +W+++F+  G   VPP++  D L +       +     +W  
Sbjct: 1004 GNGESINHLFLHCPITIELWHKLFNLAGLIWVPPRNFEDMLVIAFKGLGNSLRGKTLWQI 1063

Query: 382  IICTVISKVWEERNARIFKD 383
               T+I  VW+ERN RIF+D
Sbjct: 1064 ACLTLIWMVWQERNNRIFED 1083

[Close]

BLAST of HG10009925 vs. NCBI nr
Match: RVW50733.1 (putative ribonuclease H protein [Vitis vinifera])

HSP 1 Score: 166.4 bits (420), Expect = 5.4e-37
Identity = 102/337 (30.27%), Postives = 150/337 (44.51%), Query Frame = 0


Query: 93   GCWPSAYLGFLYMANLPHQPFGKPSWTRLRREFHHGNTTS---------FLKEKQLPSHL 152
            GC  S+    L   N          W +  R    G+  S          L+E +   HL
Sbjct: 953  GCLSSSSFAILVNGN-------AKGWVKASRGLRQGDPLSPFLFTLVADVLREGK-KDHL 1012

Query: 153  LCWDIHKFPLDEGGLGIGDIRKRNNSLLAKWIWCFKHERWALGRRFIKAKYGSSHYGQLP 212
            + W++   P + GGLG G I  RN +LL KW+W F  ER  L  + I + YG+   G   
Sbjct: 1013 VRWEVVSRPKELGGLGFGKISLRNIALLGKWLWRFPRERSGLWHKVIVSIYGTHPNGWDA 1072

Query: 213  STIRHTSLRSPWCNILKDSWIWQLEKSGVFSTKSLMYHLTTTSFSDQSGLFKKIWKLPCP 272
            + +   S R PW  I +   I+   +  V + + + +      F         +W    P
Sbjct: 1073 NMVVRWSHRCPWKAIAQVFQIFPFVRLVVGNGERIRFGKIFWGF---------LWSSKVP 1132

Query: 273  KRVKFLLWEVGHSCLNTTDRLQVRCPWISLSSSWCCLCHESNESIHHLLLHCKFTRVVWN 332
             +VK L W V H  +NT D+LQ+R P+ SL   WC LC  + ESI HL LHC  T  +WN
Sbjct: 1133 SKVKALAWIVAHGKVNTNDKLQLRRPYKSLCPQWCILCKGNGESIDHLFLHCPVTIGLWN 1192

Query: 333  EIFSAFGWTTVPPQHVFDWLSMTLIDHPFNATKGVVWSSIICTVISKVWEERNARIFKDT 392
            ++F   G   VPP+   D L +       +     +W     T++  VW+ERN RIF+D 
Sbjct: 1193 KLFKLAGLDWVPPRSFEDMLVIAFKGLGNSLRGKTLWQVACLTLVWIVWQERNNRIFEDK 1252

Query: 393  SKSTNKVLELSIFNAIFWCKNLLPLKDYSLSFLVANW 421
             +S   + +L +F +  W       +   L+ L  NW
Sbjct: 1253 GRSEETLWDLILFYSTLWASCFAAFRGVPLNVLQLNW 1272

[Close]

BLAST of HG10009925 vs. NCBI nr
Match: RVW41830.1 (hypothetical protein CK203_108403 [Vitis vinifera])

HSP 1 Score: 162.9 bits (411), Expect = 6.0e-36
Identity = 98/304 (32.24%), Postives = 135/304 (44.41%), Query Frame = 0


Query: 156 GGLGIGDIRKRNNSLLAKWIWCFKHERWALGRRFIKAKYGSSHYGQLPSTIRHTSLRSPW 215
           GGLG G    RN++LL KW+W F  ER  L  + I + YG+   G   + +   S R PW
Sbjct: 2   GGLGFGKTSMRNSALLGKWLWRFPRERSGLWHKVIASIYGTHPNGWDANMVVRWSHRCPW 61

Query: 216 -----------------------------CNIL----------KDSWIWQLEKSGVFSTK 275
                                         N+L           DS  W L  SG FS K
Sbjct: 62  KAIAQVFQEFSPFVRLVSYFCEKPYCLKQINVLSSFCASFPFSSDSRAWSLSSSGSFSVK 121

Query: 276 SLMYHLTTTSFSDQSGLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPWISLSSS 335
           S  Y L+  S        K +W    P +VK L W V H  +NT D+LQ+R P+ +L   
Sbjct: 122 SFFYALSRDSNPLMFLPAKFLWSSKVPSKVKALAWLVTHGKVNTNDKLQLRRPYKALCPQ 181

Query: 336 WCCLCHESNESIHHLLLHCKFTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHPFNATK 395
           WC LC  + ESI HL LHC  T  +W+ +F+  G   VPP+ + D L ++      +   
Sbjct: 182 WCILCKRNGESIDHLFLHCPVTIGLWHRLFNLVGVIWVPPRSIEDMLVISFKGLGNSVRG 241

Query: 396 GVVWSSIICTVISKVWEERNARIFKDTSKSTNKVLELSIFNAIFWCKNLLPLKDYSLSFL 421
            ++W     T+I  VW+ERN RIF+D  ++   V +L  F +  W       +   LS L
Sbjct: 242 KILWQIACLTLIWMVWQERNNRIFEDKGRTEEVVWDLIRFYSSLWASCTEAFRGVPLSIL 301

[Close]

BLAST of HG10009925 vs. ExPASy TrEMBL
Match: A5BV95 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_026478 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-40
Identity = 130/475 (27.37%), Postives = 196/475 (41.26%), Query Frame = 0


Query: 35   KLKVALKEWKINTFGFIESQKDAL--LKELALIDKMVE------SNSTTESLNSRRLSIK 94
            + +V+L ++  +T  F ++  + L  LK + L+   V         ST   +N+R+  + 
Sbjct: 1300 RTRVSLLQFADDTIFFSKASMEHLQNLKIILLVFGQVSGLKINLEKSTISGINTRQELLS 1359

Query: 95   D----YDCKIGCWPSAYLGFLYMANLPHQPFGKPSWTRLRREFH---------HGNTT-- 154
                 +DC++  WP +YLG     N     F  P   R+ R             G  T  
Sbjct: 1360 SLASVFDCRVSEWPLSYLGLPLGGNPKTIGFWDPVVERISRRLDGWKKAYLSLGGRITLI 1419

Query: 155  ---------SFLKEKQLPS------------------------HLLCWDIHKFPLDEGGL 214
                      FL   ++P+                        HL+ W++   P + GGL
Sbjct: 1420 QSCLSHIPSYFLSLFKIPASIASKIEKMQRNFLWSGAGEGKKDHLVRWEVVSRPKELGGL 1479

Query: 215  GIGDIRKRNNSLLAKWIWCFKHERWALGRRFIKAKYGSSHYGQLPSTIRHTSLRSPWCNI 274
            G G I  RN +LL KW+W F  ER  L  + I + YG+   G   + +   S R PW  I
Sbjct: 1480 GFGKISLRNIALLGKWLWRFPRERSGLWYKVIGSIYGTHPNGWDANMVVRWSHRCPWKAI 1539

Query: 275  LK---------------------------DSWIWQLEKSGVFSTKSLMYHLTTTSFSDQS 334
             +                           DS  W L  SG+F+ KS    L+  S     
Sbjct: 1540 AQVFQEFSPFVRLVVGNGERIRFWEDLWWDSRAWSLSSSGLFTVKSFFLALSKVSNPILF 1599

Query: 335  GLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPWISLSSSWCCLCHESNESIHHL 394
               K +W    P +VK L W V H  +NT D+LQ+R P+ SL   WC LC  + ESI HL
Sbjct: 1600 LPAKFLWSSKVPSKVKALAWIVAHGKVNTNDKLQLRRPYKSLCPQWCILCKGNGESIDHL 1659

Query: 395  LLHCKFTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHPFNATKGVVWSSIICTVISKV 427
             LHC  T  +WN++F   G   VPP+   D L +       +     +W     T++  V
Sbjct: 1660 FLHCPVTIGLWNKLFKLAGLDWVPPRSFEDMLVIAFKGLGNSLRGKTLWQVACLTLVWIV 1719

[Close]

BLAST of HG10009925 vs. ExPASy TrEMBL
Match: A0A438K2W1 (Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDp000001_863 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 4.0e-38
Identity = 97/307 (31.60%), Postives = 141/307 (45.93%), Query Frame = 0


Query: 142  HLLCWDIHKFPLDEGGLGIGDIRKRNNSLLAKWIWCFKHERWALGRRFIKAKYGSSHYGQ 201
            HL+ W++   P + GGLG G I  RN +LL KW+W F  ER  L  + I + YG+   G 
Sbjct: 1038 HLVRWEVVSRPKELGGLGFGKISLRNIALLGKWLWRFPRERSGLWHKVIVSIYGTHPNGW 1097

Query: 202  LPSTIRHTSLRSPW---CNILKDSWI-----------------------WQLEKSGVFST 261
              + +   S R PW     + ++  +                       W L  SG+FS 
Sbjct: 1098 DANMVVRWSHRCPWKAIAQVFQEFSLFVRLVVGNGERIRFGKIFGGILEWSLSSSGLFSV 1157

Query: 262  KSLMYHLTTTSFSDQSGLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPWISLSS 321
            KS    L+  S        K +W    P +VK L W V H  +NT D+LQ+R P+ SL  
Sbjct: 1158 KSFFLALSKVSNPILFLPAKFLWSSKVPSKVKALAWIVAHGKVNTNDKLQLRRPYKSLCP 1217

Query: 322  SWCCLCHESNESIHHLLLHCKFTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHPFNAT 381
             WC LC  + ESI HL L+C  T  +WN++F   G   VPP+   D L +       +  
Sbjct: 1218 QWCILCKGNGESIDHLFLYCPVTIGLWNKLFKLAGLDWVPPRSFEDMLVIAFKGLGNSLR 1277

Query: 382  KGVVWSSIICTVISKVWEERNARIFKDTSKSTNKVLELSIFNAIFWCKNLLPLKDYSLSF 423
               +W     T++  VW+ERN RIF+D  +S   + +L +F +  W       +   L+ 
Sbjct: 1278 GKTLWQVACLTLVWIVWQERNNRIFEDKGRSEETLWDLILFYSTLWASCFAAFRGVPLNV 1337

[Close]

BLAST of HG10009925 vs. ExPASy TrEMBL
Match: A0A438G6D2 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_065561 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.2e-37
Identity = 93/260 (35.77%), Postives = 128/260 (49.23%), Query Frame = 0


Query: 142  HLLCWDIHKFPLDEGGLGIGDIRKRNNSLLAKWIWCFKHERWALGRRFIKAKYGSSHYGQ 201
            HL+ WD+   P + GGLG G+   RN +LL KW+W F  ER  L  + I + YG+   G 
Sbjct: 824  HLIKWDVVSRPKELGGLGFGNTSLRNIALLGKWLWRFPRERSGLWYKVIASIYGTHPNGW 883

Query: 202  LPSTIRHTSLRSPWCNI-------------------LKDSWIWQLEKSGVFSTKSLMYHL 261
              + +   S + PW  I                   L DS  W L  SG+FS KS    L
Sbjct: 884  DANMVVRWSHKCPWKTIAQVFQRLMSSLSSVLFSPFLADSRAWSLSSSGLFSVKSFFLAL 943

Query: 262  TTTSFSDQSGLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPWISLSSSWCCLCH 321
            +  S        K +W    P +VK L W V H  +NT D+LQ+R P+ SL   WC LC 
Sbjct: 944  SKVSNPILFLPAKFLWSSKSPSKVKALAWLVAHGKVNTNDKLQLRRPYKSLCPQWCILCK 1003

Query: 322  ESNESIHHLLLHCKFTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHPFNATKGVVWSS 381
             + ESI+HL LHC  T  +W+++F+  G   VPP++  D L +       +     +W  
Sbjct: 1004 GNGESINHLFLHCPITIELWHKLFNLAGLIWVPPRNFEDMLVIAFKGLGNSLRGKTLWQI 1063

Query: 382  IICTVISKVWEERNARIFKD 383
               T+I  VW+ERN RIF+D
Sbjct: 1064 ACLTLIWMVWQERNNRIFED 1083

[Close]

BLAST of HG10009925 vs. ExPASy TrEMBL
Match: A0A438ESM4 (Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDh000004_577 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 2.6e-37
Identity = 102/337 (30.27%), Postives = 150/337 (44.51%), Query Frame = 0


Query: 93   GCWPSAYLGFLYMANLPHQPFGKPSWTRLRREFHHGNTTS---------FLKEKQLPSHL 152
            GC  S+    L   N          W +  R    G+  S          L+E +   HL
Sbjct: 953  GCLSSSSFAILVNGN-------AKGWVKASRGLRQGDPLSPFLFTLVADVLREGK-KDHL 1012

Query: 153  LCWDIHKFPLDEGGLGIGDIRKRNNSLLAKWIWCFKHERWALGRRFIKAKYGSSHYGQLP 212
            + W++   P + GGLG G I  RN +LL KW+W F  ER  L  + I + YG+   G   
Sbjct: 1013 VRWEVVSRPKELGGLGFGKISLRNIALLGKWLWRFPRERSGLWHKVIVSIYGTHPNGWDA 1072

Query: 213  STIRHTSLRSPWCNILKDSWIWQLEKSGVFSTKSLMYHLTTTSFSDQSGLFKKIWKLPCP 272
            + +   S R PW  I +   I+   +  V + + + +      F         +W    P
Sbjct: 1073 NMVVRWSHRCPWKAIAQVFQIFPFVRLVVGNGERIRFGKIFWGF---------LWSSKVP 1132

Query: 273  KRVKFLLWEVGHSCLNTTDRLQVRCPWISLSSSWCCLCHESNESIHHLLLHCKFTRVVWN 332
             +VK L W V H  +NT D+LQ+R P+ SL   WC LC  + ESI HL LHC  T  +WN
Sbjct: 1133 SKVKALAWIVAHGKVNTNDKLQLRRPYKSLCPQWCILCKGNGESIDHLFLHCPVTIGLWN 1192

Query: 333  EIFSAFGWTTVPPQHVFDWLSMTLIDHPFNATKGVVWSSIICTVISKVWEERNARIFKDT 392
            ++F   G   VPP+   D L +       +     +W     T++  VW+ERN RIF+D 
Sbjct: 1193 KLFKLAGLDWVPPRSFEDMLVIAFKGLGNSLRGKTLWQVACLTLVWIVWQERNNRIFEDK 1252

Query: 393  SKSTNKVLELSIFNAIFWCKNLLPLKDYSLSFLVANW 421
             +S   + +L +F +  W       +   L+ L  NW
Sbjct: 1253 GRSEETLWDLILFYSTLWASCFAAFRGVPLNVLQLNW 1272

[Close]

BLAST of HG10009925 vs. ExPASy TrEMBL
Match: A0A438E2J1 (zf-RVT domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_108403 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.9e-36
Identity = 98/304 (32.24%), Postives = 135/304 (44.41%), Query Frame = 0


Query: 156 GGLGIGDIRKRNNSLLAKWIWCFKHERWALGRRFIKAKYGSSHYGQLPSTIRHTSLRSPW 215
           GGLG G    RN++LL KW+W F  ER  L  + I + YG+   G   + +   S R PW
Sbjct: 2   GGLGFGKTSMRNSALLGKWLWRFPRERSGLWHKVIASIYGTHPNGWDANMVVRWSHRCPW 61

Query: 216 -----------------------------CNIL----------KDSWIWQLEKSGVFSTK 275
                                         N+L           DS  W L  SG FS K
Sbjct: 62  KAIAQVFQEFSPFVRLVSYFCEKPYCLKQINVLSSFCASFPFSSDSRAWSLSSSGSFSVK 121

Query: 276 SLMYHLTTTSFSDQSGLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPWISLSSS 335
           S  Y L+  S        K +W    P +VK L W V H  +NT D+LQ+R P+ +L   
Sbjct: 122 SFFYALSRDSNPLMFLPAKFLWSSKVPSKVKALAWLVTHGKVNTNDKLQLRRPYKALCPQ 181

Query: 336 WCCLCHESNESIHHLLLHCKFTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHPFNATK 395
           WC LC  + ESI HL LHC  T  +W+ +F+  G   VPP+ + D L ++      +   
Sbjct: 182 WCILCKRNGESIDHLFLHCPVTIGLWHRLFNLVGVIWVPPRSIEDMLVISFKGLGNSVRG 241

Query: 396 GVVWSSIICTVISKVWEERNARIFKDTSKSTNKVLELSIFNAIFWCKNLLPLKDYSLSFL 421
            ++W     T+I  VW+ERN RIF+D  ++   V +L  F +  W       +   LS L
Sbjct: 242 KILWQIACLTLIWMVWQERNNRIFEDKGRTEEVVWDLIRFYSSLWASCTEAFRGVPLSIL 301

[Close]

BLAST of HG10009925 vs. TAIR 10
Match: AT5G18880.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 55.1 bits (131), Expect = 1.6e-07
Identity = 37/137 (27.01%), Postives = 58/137 (42.34%), Query Frame = 0


Query: 255 KKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPW-ISLSSSWCCLCHESNESIHHLLL 314
           K +W      R   + W      L T DRL+    W +++ SSW  LC   +E+  HL  
Sbjct: 129 KVVWFKEYIPRFSLITWMSFLERLPTRDRLR---GWGMNIPSSW-VLCSNGDETHAHLFF 188

Query: 315 HCKFTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHPFNATKGVVWSSIICTVISKVWE 374
            C F+  +W    S F      P       S  ++  P  +    +   ++ + +  VW+
Sbjct: 189 ECSFSLAIWEFFASKF---RPSPPFGLPAASSWILQLPLRSHSTTILKLLLQSAVYHVWK 248

Query: 375 ERNARIFKDTSKSTNKV 391
           ERNARIF   S S + +
Sbjct: 249 ERNARIFTSISSSASSL 258

[Close]

BLAST of HG10009925 vs. TAIR 10
Match: AT3G25720.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 47.0 bits (110), Expect = 4.5e-05
Identity = 56/259 (21.62%), Postives = 101/259 (39.00%), Query Frame = 0


Query: 152 PLDEGGLGIGDIRKRNNSLLAKWIWCFKHERWALGRRFIKAKYGSSHYGQLPSTIRHTSL 211
           P  EGGLG+    + N +L  K +W     R   G   +   +   H+ Q    +   S+
Sbjct: 21  PKAEGGLGLRWFSEWNTTLNLKLVW-----RLFSGGGSLWVDWHRYHHLQ---GLGDASV 80

Query: 212 RSPWCN--ILKDSWIWQL-----EKSGVFSTKSLMYHLTTTSFSDQSGLFKKIWKLPCPK 271
              W +  ++ DSW W+        +  F   ++   LT   ++D    F  +       
Sbjct: 81  SKFWTSQELVSDSWNWKCLLRLRPLAERFLRCNIGNGLTARFWTDNWTPFGPLLIHIGAA 140

Query: 272 RVKFLLWEVGHSCLNTTDRLQVRCPWISLSSSWCCLCHESNESIHHLLLHCKFTRVVWNE 331
           R   L   +  S  + T  +     W    S  CCLC  + E+  HLLL C F++ +W+ 
Sbjct: 141 RPNRLRIPIEASVADATQGIS----WGLPVSPLCCLCSCAPETRDHLLLGCSFSKALWSS 200

Query: 332 IFSAFGWTTVPPQHVFDWLSMTL-IDHPFNATKGVVWSSIICTVISKVWEERNARIFKD- 391
           + S     ++      +W  + L I     +    +   +  +V+   W++RN  +    
Sbjct: 201 VQSRLRLHSL---IFLNWAELLLWIRRSSTSAPSTLRKLVAHSVVYATWKQRNNMLHNSH 260

Query: 392 --TSKSTNKVLELSIFNAI 400
                S  K+++  I N+I
Sbjct: 261 HLDPASVFKIIDRKIINSI 264

[Close]

BLAST of HG10009925 vs. TAIR 10
Match: AT4G10613.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 45.8 bits (107), Expect = 9.9e-05
Identity = 27/105 (25.71%), Postives = 50/105 (47.62%), Query Frame = 0


Query: 278 LNTTDRLQVRCPWISLS---SSWCCLCHESNESIHHLLLHCKFTRVVWNEIFSAFGWTTV 337
           ++  DRL  R   +S     S  CCLC +S E+  HL+L C F+  +WN + +      V
Sbjct: 3   ISNLDRLPTRARLVSWGLQISPLCCLCSQSVETRDHLILTCGFSSSIWNMVQARLRLQPV 62

Query: 338 P---PQHVFDWLSMTLIDHPFNATKGVVWSSIICTVISKVWEERN 377
                + +  W+ ++    P +  + +V  + +C     +W++RN
Sbjct: 63  QFRVWESLLSWIKLSTASSP-SIIRKLVAQATVCA----IWKQRN 102

[Close]

BLAST of HG10009925 vs. TAIR 10
Match: AT2G06845.1 (Beta-galactosidase related protein )

HSP 1 Score: 45.1 bits (105), Expect = 1.7e-04
Identity = 29/104 (27.88%), Postives = 48/104 (46.15%), Query Frame = 0


Query: 298 CCLCHESNESIHHLLLHCKFTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHPFNATKG 357
           CC C E  E+I H+L HC+F ++VW+    A  W +V    V + L +T          G
Sbjct: 78  CCRCGEP-ETILHMLFHCQFAQLVWSPTPFARHWASVGAGSVREGL-ITGCKLACLPPTG 137

Query: 358 VVWSSIICTVISKVWEERNARIFKDTSKSTNKVLELSIFNAIFW 402
           +    +   +   +W+ RN ++F     +  + L  +I NA  W
Sbjct: 138 IASGPLAPWICWSLWKSRNQKVFSTRFFTPEETLLKAITNAKEW 179

The following BLAST results are available for this feature:

BLAST of HG10009925 vs. NCBI nr


Match Name	E-value	Identity	Description
CAN75040.1	2.3e-40	27.37	hypothetical protein VITISV_026478 [Vitis vinifera]	[more]
RVX15530.1	8.3e-38	31.60	putative ribonuclease H protein [Vitis vinifera]	[more]
RVW67766.1	2.4e-37	35.77	hypothetical protein CK203_065561 [Vitis vinifera]	[more]
RVW50733.1	5.4e-37	30.27	putative ribonuclease H protein [Vitis vinifera]	[more]
RVW41830.1	6.0e-36	32.24	hypothetical protein CK203_108403 [Vitis vinifera]	[more]

BLAST of HG10009925 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10009925 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A5BV95	1.1e-40	27.37	Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI...	[more]
A0A438K2W1	4.0e-38	31.60	Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDp000001_863 P...	[more]
A0A438G6D2	1.2e-37	35.77	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_065561 PE=4 SV=1	[more]
A0A438ESM4	2.6e-37	30.27	Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDh000004_577 P...	[more]
A0A438E2J1	2.9e-36	32.24	zf-RVT domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_108403 PE=4...	[more]

BLAST of HG10009925 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G18880.1	1.6e-07	27.01	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT3G25720.1	4.5e-05	21.62	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT4G10613.1	9.9e-05	25.71	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT2G06845.1	1.7e-04	27.88	Beta-galactosidase related protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 233..322 e-value: 4.4E-15 score: 56.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10009925.1	HG10009925.1	mRNA