HG10009918 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10009918
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCharged multivesicular body protein 1b
LocationChr06: 14090159 .. 14095670 (-)
RNA-Seq ExpressionHG10009918
SyntenyHG10009918
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCGGGGGAACGTGTTGGTGAAATTGGAGGTGTCATGTTGGAGGGCAGCTGGTGGAGGCTGGCCTGTAAAAGCACCCACGCTTGTGAGACTTCGGCTTTCGTCATCTCACCAAGCGTTAACTTCGGACTACACAAAGTTTAGATCGAGGTTCAGGTATTTTGTTCGAACAGCCCCCAAGGTCAATGTAACCCTGTATTGAAGGAAAACATCCTCCATCTGCTTATAGGCTTCTGTTTTTTTTTTAAGTGTTCAGTAAAAAATATGGCGTCTTATAACTTGGTCCGAGCTTCTTGCAGCTCTTCCTCAACCACAAACAACTTCTCCTCCATTTTGCTTATCTAGATTTGAGAGGCGTCACATCGGGATTGAAGCTGTTGGGTTTTATGTCCTAAAACTCGTAGTTTGTAATTTTTTAACACTTTCTATTATCAATAAAGTTGTTATTGTGTTTTATCAATAAAAGTTGTTATTGAATATGTGATTTGTAGTTTTATAACCATAAATCCAATAAACTAAGAACACATGACTTTAGTATGAGTACTTGAACTATGTGTGGAGACATATAAGTGGATCAAGTTCGAGTAATAGCCAAAACAGTCTATAGTATAAGGATTAGGTTGGGTACCTTATCCTAGAGACATTATAGGATGCGGCCCATTTTGTATTTGATACAAACAATGTGATACTGAATCATTCATGTTGAGACATGCCAGTGGGGGCATCCTGTGCAATGAGTTCGCATAAGATCGGACTACGAAATAGTCACTGTTACATTATAACACCATTTATTGTTAGCACCAACTATTTCAACTAGATGACATAGGTAACTTGATCTTAATTCTAAGCTAATTATGAACTCATGTTTATTCAGGAATATCCTTAGATCTGCATGGGTGAGAGTGACTCGACTTTGCCGACTCAATATGTCTACCATTTCAGGGGTAAAACCGAGTAGATAGCTGGGAACATAGTTTTATAAGATGAAATTTACTCCTACCTGACTTAGGGTTAGTAGATAGGTTGTTCTCTTAACTACTGACTTCGTGTCTTGAACAAGGGTCCTCACCCTCTCATTGGCCCAAAGTGACTTGGTTTAGTGGTTGGATCACAAACCAATTGTTCATTAGAGGATGAATGGGGCTTAAGGAAAAATATGTATTCACAGAGGTAAAACGGTAATTTTGACCTAGCTGTGATTACGAACAATCTGTGAAGAATCGACTTACTCATTATGGTTATATCAACCGGACAAAAATATATCTACAATGAGGAGAGTGCAGCTACGGGCTTTAGTGGAGTGTCTCGTTAGTTAACAAATATCGGTTAACTAGGTTAAAGAGTTTAATCGATCGTTGGAGCTATTAAGTCCCTCTACTAGCTCACAAATAGATAAAACCTTAGATGATGTGGTGAATAAATTTGAAACGTTCAAATTCGGCTTAGGGAATAAATGTTGGATATATGCGATATATCTAAACATATCGACGTTTAATTTTGAATTAAACGAACAAAGAGAGTTGAGAATAATATTTAAATATGATTTAAATATTAAATATATGAATAGAAATTCATATTTGAAAAAATTAGTTTTCGAGAAAATCGAGGTTGGTGTTGAAATAATATTATTCTAATATTTGATATTAAATTAATATTTAAAATTAATTTTTGAAATTTAAAAATGATTTTAAATATTTTTTTTATTAAATCAATTTAAAATCAAATTTTCAAAGCTTTGGATTTCTCCACTAACCCTTAACCCTGTTGGTGTTTAATCCTCATTTTGACACCAAATCCACTCAAAATTAAAATAATTTTGTTGTCAAAGTTGTGTTTATTTTGATTGCATGTTAAACCTCTATAAAAGAATTTTGGATTTGGTTGAGATTGAGGTTAAAAAATTTGGCAAATTAAGTGTTATTTTGGAAAAATTTTCTAAGAACTCCTTTACTCTCTATCTTTTTTTCCCTTACAAATTCATCACAAAATTGGATTCCACAATCTAATCTAAGACCAAAGAATAGTAAAGAAGACTCTTGTGATAGTCTACCATCAAGTTTCGAGGAGAATTTTGAACTACAAGGATATGTGTTCTTAAAATTCTAGAACTTTACAAGTTGTTTATCCTAGAAATTGACCATGTTAGAGTGCAATTTGATCTAATCTGCTGTGCATACATGTTCATTACTCTATCAGAAGCATCATCCTTAAGTTGTGGCAAGTAAGGTGGATGCCTCAGCATGAAGAGATGAAACTCGATCAAATTCCTTCCGAGGGACAGAATTTCACCTGAGAACTTTGTGCAATCCGCATAGTTTTGCTTATGATATTCCACCTCATCACTTAATTTTTGGTAGGACATCAACATTTCATAGGACATCTGAAGAAAAGAAACAAGAAAGACAAAAATGCATATATAGCTAGAATACAAAATGATATCATCTGATAGGGGTCACTTACCATACGGAGGTTCTGTTGGGCTTGCACAATACCCGGTCTTAGGTCGGCAAGCCATCGACTCAACACTTTCTCACTCAAACATGTCCATTGGGCCAGGAATGCAATCTAATCACTCTTTCATTCATATTGACCGTGAAAGTCGAAAGGAGAGGGGCTGGGCGAGCTGGACCCCTTAACAATTGAAGGGAACAAAATTGTTGGGAGTTATGTACTAAATCTCGAGGTTTGTAAATTGTATAAACGAATTATTTATTTAATAAAATAAGTAGTATTTTATTTGATATTTAGACTGCTTAACTCAGTCCAATAAACTAAGATCCAAGGTTATTTTATTTGATATTTAGACATACAAGTGGATCTTGTTCAAGTAATAACATAAATGGACTATAGTACATAGATAAGGTTGGGTGTCTTATCCTGGTAACACTATGGATACAACTCACTTTGTAAATGTTACACAAAAGTGGTAAGTGTTACAAATGATGTGATCCAACTCGTTCATGTCGAGAAATGTGAGTGGGGGTATCCTATACAAAGAGATTGTATAAAATCGAACTGCAAAATGATTAATCTCTCTTTATAATACCGTTGACTGAAGATAATAACATTTGATAGGATGATCGTATGTAACTCGATCTCAATCCTAAGTGAGTTATGGACTCCCGTCTATAAGCGCAGTCCTTTGATTTGGGGAAATTACTAAAAATAAGACAAAATTTGGAAGTGTAAAGAGGTTTAGGATGGATTTTAAATTGAAAGAGTAATAAGACAAATGGGTATGTGCAATGTCATATTTGCCCTTCAATAAGAAAAAAGTCATAGGTGTGTCCAACCACACAACATCTGGGTGACCATCACCAATCATCAGCGCCGATGACTGGGATTTCGATAGTGACTCTAATGGCGGCTGCGACTACGATTTTGGACAACGACTTCTCTCTCAAACTTCAACCATTTGACTTCAACTGTGACTTATTTCCCTAAACGGCGATGCATATGAAGACGTCTTTCTCACTCACGATGAAGAGCACTGCAAGAAAAAAAAAAACAAAAGCCTCCACTTGATTTCAACTCAATATGCCCCACTAAATTCTCCCTTTGGCAAGCCACGACCACAAACAGATTTTCTTTGTTTTGTCACCTGTTCTCTATCCTCCACCCTAGGACACAAAAATGTATGTGAATAAAAATAATATAGGATCCATGAAAAAGACTTTTGCATTGGGTGATCCCTTTTGATGTTGGACTTTTAATCTAATATTTTGCAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATCTTTCATTGAATTATTTGCCTTATTTGAAAGAAAATGGTCATTTTGGTTATTTGTCTTGTTTGAATGTACATCATCAATACGGATGATAATGAATCTATAAGCCAATAAAAATTCGAAGGCCCAGTATATCAATGTAAATAAGAAAATGCCCATTTATTTATATGTTAATGGTTGTGACTTGGATAGTGATGCCTGCTCAACTTTTGCAAAAGTTCTTCCTTCTTCATCCTCTCAATAACTTTTTGTTGGATAAAATACACATAAATACAAGTAAGTGTTCCATAAAAATTAATATGTATATCTTATTGATAAGTGTGGGAAAGGCAACCTTAGGGAAATACATGCTTGAAATCATTTTAGCTTATGTGTGACAATAATTTTTTTAAATCATTATAGTTAAAATATATGCATTAAGTAGCTAAAAAATACCCTAAAAAATCAATACTACTTTTTCTAGATGTTTTAGGTGATTTAGGGTGGGTATGGTCTTATTTTAGATACTTTGTTGGCTACTACTTTTTATCTCATAACATCTTGCAACAACTTCCAAATTTGAAACATTCAATTGGAATTCATTTTTATAAATGTTTTAGGTAATTTAGGATTGGTATGGTCATATTTTAGTTAGTTTGTTAGCTTTTACTTTTTATCTCGCAGTATCTCGCAACATCTTGTAACAACTTCCAAACTTGAAACATTCAATTGGAACTAATTTTTATAGATGTTTTAGGTGATTTAGGGTGGGTATGGTCATATTTTAGATAGTTTATTAGCTACTACTTTTTATCTTGCAACATCTCGTAACAACTTCTAAACTTGAAATACTCAATTGGAACTCATTTTTGTAGATATTTTTGTTGGGTTTTATGTCCTAAAACTGATAGTTTGTAAACATTAACGTCACTACAAGAAATTTGGGCTTTGATGTCGGTTGGAAAAACTAAAAACGGATGTACAATGTCGGTTTCTTAAAAAAAAACACACATCTTTAATGTCAGTTTTAAACCGACATTAAAGACATAATTAATGAACCGACATTGTTGCTACCCATTTATTCTTTTTTTCCCCTTTAGTAAAAATTTCACTCTTTCATTTCTCTATTTTTCTTCTCTCTACCATTCTTCTCTCTTTCTCACAAAATTTCATCTCCCCCAAAACCCTCTGCCTTCACCATCTCTCACCACCGTTGTGAGTTCGCCTCCGTTGTCAATCCTTCAGATCTACGTCGGCATCGTGCAGTACTGTTCGCCAGCGTCATTATCAACGTCGGTTTCGTGCAGATCCGTAAGTCGCGAGTCAGATCTGCTCATCGGCGTCGTGCAGATTCGTTCGCCAGCGTCAGATCAGCATAAGCGTCGTGCAGTCTTCAAATACGTGCAGATCCATCGGTCGTGAGTCAGATCCGCTCGTCGGCGTCGTGCAGATCCGTTTATTAGCGTCAGATTCGTGCTGACTTCAGATCTGTGTCGATCCATTACTCGCGTAGTCAGATCCGCTCGTCGGCGTTGTGACTTAGCTTTATTCGCTAGGTTTGTGTTCGTTCGTCAGATCTACTGTTCTTCAAGCCCGATCTTAGCTCAAATCTGTTCAAGATCAAGAAAATGCGAGGAAAAAAAATCTGAGAAGCTCAAGATCAAGAAAGCCATGGAGAAGGGAAACATGGATGGAGCACGAATTTACACTAAGAATGCAATTCAGAAGCATACGGAACATATGAACTACCTCTGA

mRNA sequence

ATGCCTCGGGGGAACGTGTTGGTGAAATTGGAGGTGTCATGTTGGAGGGCAGCTGGTGGAGGCTGGCCTGTAAAAGCACCCACGCTTGTGAGACTTCGGCTTTCGTCATCTCACCAAGCGTTAACTTCGGACTACACAAAGTTTAGATCGAGGTTCAGATCCGCTCGTCGGCGTCGTGCAGATCCGTTTATTAGCGTCAGATTCGTGCTGACTTCAGATCTGTGTCGATCCATTACTCGCGTAGTCAGATCCGCTCGTCGGCGTTGTGACTTAGCTTTATTCGCTAGGTTTGTGTTCGTTCGTCAGATCTACTGTTCTTCAAGCCCGATCTTAGCTCAAATCTGTTCAAGATCAAGAAAATGCGAGGAAAAAAAATCTGAGAAGCTCAAGATCAAGAAAGCCATGGAGAAGGGAAACATGGATGGAGCACGAATTTACACTAAGAATGCAATTCAGAAGCATACGGAACATATGAACTACCTCTGA

Coding sequence (CDS)

ATGCCTCGGGGGAACGTGTTGGTGAAATTGGAGGTGTCATGTTGGAGGGCAGCTGGTGGAGGCTGGCCTGTAAAAGCACCCACGCTTGTGAGACTTCGGCTTTCGTCATCTCACCAAGCGTTAACTTCGGACTACACAAAGTTTAGATCGAGGTTCAGATCCGCTCGTCGGCGTCGTGCAGATCCGTTTATTAGCGTCAGATTCGTGCTGACTTCAGATCTGTGTCGATCCATTACTCGCGTAGTCAGATCCGCTCGTCGGCGTTGTGACTTAGCTTTATTCGCTAGGTTTGTGTTCGTTCGTCAGATCTACTGTTCTTCAAGCCCGATCTTAGCTCAAATCTGTTCAAGATCAAGAAAATGCGAGGAAAAAAAATCTGAGAAGCTCAAGATCAAGAAAGCCATGGAGAAGGGAAACATGGATGGAGCACGAATTTACACTAAGAATGCAATTCAGAAGCATACGGAACATATGAACTACCTCTGA

Protein sequence

MPRGNVLVKLEVSCWRAAGGGWPVKAPTLVRLRLSSSHQALTSDYTKFRSRFRSARRRRADPFISVRFVLTSDLCRSITRVVRSARRRCDLALFARFVFVRQIYCSSSPILAQICSRSRKCEEKKSEKLKIKKAMEKGNMDGARIYTKNAIQKHTEHMNYL
Homology
[Close]
BLAST of HG10009918 vs. NCBI nr
Match: XP_009396527.1 (PREDICTED: ESCRT-related protein CHMP1-like [Musa acuminata subsp. malaccensis] >CAG1858154.1 unnamed protein product [Musa acuminata subsp. malaccensis])

HSP 1 Score: 71.6 bits (174), Expect = 6.8e-09
Identity = 36/46 (78.26%), Postives = 43/46 (93.48%), Query Frame = 0 

Query: 117 RSRKCE-EKKSEKLKIKKAMEKGNMDGARIYTKNAIQKHTEHMNYL 162
           ++RKCE E+KSEKLK+KKA+EKGNMDGARIY +NAI+K TEHMNYL
Sbjct: 24  QARKCEKEEKSEKLKVKKAIEKGNMDGARIYAQNAIRKRTEHMNYL 69

[Close]
BLAST of HG10009918 vs. NCBI nr
Match: XP_008382778.3 (ESCRT-related protein CHMP1B-like [Malus domestica])

HSP 1 Score: 70.9 bits (172), Expect = 1.2e-08
Identity = 36/46 (78.26%), Postives = 43/46 (93.48%), Query Frame = 0 

Query: 117 RSRKCE-EKKSEKLKIKKAMEKGNMDGARIYTKNAIQKHTEHMNYL 162
           +SRKCE E+K+EKLKIKKAMEKGN+DG+RIY +NAI+KHTE MNYL
Sbjct: 24  QSRKCEKEEKAEKLKIKKAMEKGNVDGSRIYAENAIRKHTEQMNYL 69

[Close]
BLAST of HG10009918 vs. NCBI nr
Match: XP_022949550.1 (ESCRT-related protein CHMP1B-like [Cucurbita moschata] >XP_022998305.1 ESCRT-related protein CHMP1B-like [Cucurbita maxima] >XP_023523585.1 ESCRT-related protein CHMP1B-like [Cucurbita pepo subsp. pepo] >KAG6606731.1 ESCRT-related protein CHMP1A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036449.1 ESCRT-related protein CHMP1A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 70.5 bits (171), Expect = 1.5e-08
Identity = 37/46 (80.43%), Postives = 42/46 (91.30%), Query Frame = 0 

Query: 117 RSRKCE-EKKSEKLKIKKAMEKGNMDGARIYTKNAIQKHTEHMNYL 162
           ++RKCE E+KSEKLKIKKAMEKGNMDGARIY +NAI+K TE MNYL
Sbjct: 24  QARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIRKRTEQMNYL 69

[Close]
BLAST of HG10009918 vs. NCBI nr
Match: XP_022148096.1 (ESCRT-related protein CHMP1B-like isoform X1 [Momordica charantia])

HSP 1 Score: 70.5 bits (171), Expect = 1.5e-08
Identity = 37/46 (80.43%), Postives = 42/46 (91.30%), Query Frame = 0 

Query: 117 RSRKCE-EKKSEKLKIKKAMEKGNMDGARIYTKNAIQKHTEHMNYL 162
           ++RKCE E+KSEKLKIKKAMEKGNMDGARIY +NAI+K TE MNYL
Sbjct: 24  QARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIRKRTEQMNYL 69

[Close]
BLAST of HG10009918 vs. NCBI nr
Match: XP_004146833.1 (ESCRT-related protein CHMP1B [Cucumis sativus] >XP_008447589.1 PREDICTED: ESCRT-related protein CHMP1B-like [Cucumis melo] >KAA0061110.1 ESCRT-related protein CHMP1B [Cucumis melo var. makuwa])

HSP 1 Score: 70.5 bits (171), Expect = 1.5e-08
Identity = 37/46 (80.43%), Postives = 42/46 (91.30%), Query Frame = 0 

Query: 117 RSRKCE-EKKSEKLKIKKAMEKGNMDGARIYTKNAIQKHTEHMNYL 162
           ++RKCE E+KSEKLKIKKAMEKGNMDGARIY +NAI+K TE MNYL
Sbjct: 24  QARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIRKRTEQMNYL 69

[Close]
BLAST of HG10009918 vs. ExPASy Swiss-Prot
Match: Q84VG1 (ESCRT-related protein CHMP1 OS=Oryza sativa subsp. japonica OX=39947 GN=CHMP1 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.8e-11
Identity = 34/46 (73.91%), Postives = 42/46 (91.30%), Query Frame = 0 

Query: 117 RSRKCE-EKKSEKLKIKKAMEKGNMDGARIYTKNAIQKHTEHMNYL 162
           ++RKCE E+K +KLK+KKA+EKGNMDGARIY +NAI+K TEHMNYL
Sbjct: 24  QARKCEKEEKEQKLKVKKAIEKGNMDGARIYAENAIRKRTEHMNYL 69

[Close]
BLAST of HG10009918 vs. ExPASy Swiss-Prot
Match: Q9SSM4 (ESCRT-related protein CHMP1B OS=Arabidopsis thaliana OX=3702 GN=CHMP1B PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.2e-10
Identity = 34/46 (73.91%), Postives = 42/46 (91.30%), Query Frame = 0 

Query: 117 RSRKCE-EKKSEKLKIKKAMEKGNMDGARIYTKNAIQKHTEHMNYL 162
           +SRKCE E+K+EKLK+KKA+EKGNMDGARIY +NAI+K +E MNYL
Sbjct: 24  QSRKCEKEEKAEKLKVKKAIEKGNMDGARIYAENAIRKRSEQMNYL 69

[Close]
BLAST of HG10009918 vs. ExPASy Swiss-Prot
Match: Q8LE58 (ESCRT-related protein CHMP1A OS=Arabidopsis thaliana OX=3702 GN=CHMP1A PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.9e-10
Identity = 33/46 (71.74%), Postives = 42/46 (91.30%), Query Frame = 0 

Query: 117 RSRKCE-EKKSEKLKIKKAMEKGNMDGARIYTKNAIQKHTEHMNYL 162
           ++RKCE E++SEKLK+KKA+EKGNMDGARIY +NAI+K +E MNYL
Sbjct: 24  QARKCEKEERSEKLKVKKAIEKGNMDGARIYAENAIRKRSEQMNYL 69

[Close]
BLAST of HG10009918 vs. ExPASy Swiss-Prot
Match: O96552 (Charged multivesicular body protein 1 OS=Dictyostelium discoideum OX=44689 GN=chmp1 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.3e-06
Identity = 26/50 (52.00%), Postives = 42/50 (84.00%), Query Frame = 0 

Query: 113 QICSRSRKCEE-KKSEKLKIKKAMEKGNMDGARIYTKNAIQKHTEHMNYL 162
           Q+  +S+K E+ +K++K+K+KKA+E+GNMDGARIY +NAI++  + +NYL
Sbjct: 14  QLEKQSKKSEQSEKAQKIKLKKAIEQGNMDGARIYAQNAIREKNQSLNYL 63

[Close]
BLAST of HG10009918 vs. ExPASy Swiss-Prot
Match: Q7ZVB1 (Charged multivesicular body protein 1b OS=Danio rerio OX=7955 GN=chmp1b PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 8.1e-05
Identity = 23/45 (51.11%), Postives = 39/45 (86.67%), Query Frame = 0 

Query: 118 SRKCE-EKKSEKLKIKKAMEKGNMDGARIYTKNAIQKHTEHMNYL 162
           S+KC+ E+K+EK+K+KKA++KGNM+ ARI+ +NAI++  + +N+L
Sbjct: 22  SKKCDKEEKAEKVKVKKAIQKGNMEVARIHAENAIRQKNQSVNFL 66

[Close]
BLAST of HG10009918 vs. ExPASy TrEMBL
Match: M0RYJ5 (Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=103981501 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 3.3e-09
Identity = 36/46 (78.26%), Postives = 43/46 (93.48%), Query Frame = 0 

Query: 117 RSRKCE-EKKSEKLKIKKAMEKGNMDGARIYTKNAIQKHTEHMNYL 162
           ++RKCE E+KSEKLK+KKA+EKGNMDGARIY +NAI+K TEHMNYL
Sbjct: 24  QARKCEKEEKSEKLKVKKAIEKGNMDGARIYAQNAIRKRTEHMNYL 69

[Close]
BLAST of HG10009918 vs. ExPASy TrEMBL
Match: A0A6J1KC50 (ESCRT-related protein CHMP1B-like OS=Cucurbita maxima OX=3661 GN=LOC111492980 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 7.4e-09
Identity = 37/46 (80.43%), Postives = 42/46 (91.30%), Query Frame = 0 

Query: 117 RSRKCE-EKKSEKLKIKKAMEKGNMDGARIYTKNAIQKHTEHMNYL 162
           ++RKCE E+KSEKLKIKKAMEKGNMDGARIY +NAI+K TE MNYL
Sbjct: 24  QARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIRKRTEQMNYL 69

[Close]
BLAST of HG10009918 vs. ExPASy TrEMBL
Match: A0A5A7V1A1 (ESCRT-related protein CHMP1B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold348G00240 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 7.4e-09
Identity = 37/46 (80.43%), Postives = 42/46 (91.30%), Query Frame = 0 

Query: 117 RSRKCE-EKKSEKLKIKKAMEKGNMDGARIYTKNAIQKHTEHMNYL 162
           ++RKCE E+KSEKLKIKKAMEKGNMDGARIY +NAI+K TE MNYL
Sbjct: 24  QARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIRKRTEQMNYL 69

[Close]
BLAST of HG10009918 vs. ExPASy TrEMBL
Match: A0A0A0LIG8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G849970 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 7.4e-09
Identity = 37/46 (80.43%), Postives = 42/46 (91.30%), Query Frame = 0 

Query: 117 RSRKCE-EKKSEKLKIKKAMEKGNMDGARIYTKNAIQKHTEHMNYL 162
           ++RKCE E+KSEKLKIKKAMEKGNMDGARIY +NAI+K TE MNYL
Sbjct: 24  QARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIRKRTEQMNYL 69

[Close]
BLAST of HG10009918 vs. ExPASy TrEMBL
Match: A0A6J1D453 (ESCRT-related protein CHMP1B-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111016858 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 7.4e-09
Identity = 37/46 (80.43%), Postives = 42/46 (91.30%), Query Frame = 0 

Query: 117 RSRKCE-EKKSEKLKIKKAMEKGNMDGARIYTKNAIQKHTEHMNYL 162
           ++RKCE E+KSEKLKIKKAMEKGNMDGARIY +NAI+K TE MNYL
Sbjct: 13  QARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIRKRTEQMNYL 58

[Close]
BLAST of HG10009918 vs. TAIR 10
Match: AT1G73030.1 (SNF7 family protein )

HSP 1 Score: 67.0 bits (162), Expect = 1.6e-11
Identity = 34/46 (73.91%), Postives = 42/46 (91.30%), Query Frame = 0 

Query: 117 RSRKCE-EKKSEKLKIKKAMEKGNMDGARIYTKNAIQKHTEHMNYL 162
           +SRKCE E+K+EKLK+KKA+EKGNMDGARIY +NAI+K +E MNYL
Sbjct: 24  QSRKCEKEEKAEKLKVKKAIEKGNMDGARIYAENAIRKRSEQMNYL 69

[Close]
BLAST of HG10009918 vs. TAIR 10
Match: AT1G17730.1 (vacuolar protein sorting 46.1 )

HSP 1 Score: 65.9 bits (159), Expect = 3.5e-11
Identity = 33/46 (71.74%), Postives = 42/46 (91.30%), Query Frame = 0 

Query: 117 RSRKCE-EKKSEKLKIKKAMEKGNMDGARIYTKNAIQKHTEHMNYL 162
           ++RKCE E++SEKLK+KKA+EKGNMDGARIY +NAI+K +E MNYL
Sbjct: 24  QARKCEKEERSEKLKVKKAIEKGNMDGARIYAENAIRKRSEQMNYL 69

The following BLAST results are available for this feature:
BLAST of HG10009918 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_009396527.16.8e-0978.26PREDICTED: ESCRT-related protein CHMP1-like [Musa acuminata subsp. malaccensis] ... [more]
XP_008382778.31.2e-0878.26ESCRT-related protein CHMP1B-like [Malus domestica][more]
XP_022949550.11.5e-0880.43ESCRT-related protein CHMP1B-like [Cucurbita moschata] >XP_022998305.1 ESCRT-rel... [more]
XP_022148096.11.5e-0880.43ESCRT-related protein CHMP1B-like isoform X1 [Momordica charantia][more]
XP_004146833.11.5e-0880.43ESCRT-related protein CHMP1B [Cucumis sativus] >XP_008447589.1 PREDICTED: ESCRT-... [more]
BLAST of HG10009918 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q84VG15.8e-1173.91ESCRT-related protein CHMP1 OS=Oryza sativa subsp. japonica OX=39947 GN=CHMP1 PE... [more]
Q9SSM42.2e-1073.91ESCRT-related protein CHMP1B OS=Arabidopsis thaliana OX=3702 GN=CHMP1B PE=1 SV=1[more]
Q8LE584.9e-1071.74ESCRT-related protein CHMP1A OS=Arabidopsis thaliana OX=3702 GN=CHMP1A PE=1 SV=1[more]
O965523.3e-0652.00Charged multivesicular body protein 1 OS=Dictyostelium discoideum OX=44689 GN=ch... [more]
Q7ZVB18.1e-0551.11Charged multivesicular body protein 1b OS=Danio rerio OX=7955 GN=chmp1b PE=2 SV=... [more]
BLAST of HG10009918 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
M0RYJ53.3e-0978.26Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=103981... [more]
A0A6J1KC507.4e-0980.43ESCRT-related protein CHMP1B-like OS=Cucurbita maxima OX=3661 GN=LOC111492980 PE... [more]
A0A5A7V1A17.4e-0980.43ESCRT-related protein CHMP1B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
A0A0A0LIG87.4e-0980.43Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G849970 PE=4 SV=1[more]
A0A6J1D4537.4e-0980.43ESCRT-related protein CHMP1B-like isoform X2 OS=Momordica charantia OX=3673 GN=L... [more]
BLAST of HG10009918 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G73030.11.6e-1173.91SNF7 family protein [more]
AT1G17730.13.5e-1171.74vacuolar protein sorting 46.1 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10476:SF57ESCRT-RELATED PROTEIN CHMP1A-RELATEDcoord: 116..161
NoneNo IPR availablePANTHERPTHR10476CHARGED MULTIVESICULAR BODY PROTEINcoord: 116..161

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10009918.1HG10009918.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032509 endosome transport via multivesicular body sorting pathway
biological_process GO:0045324 late endosome to vacuole transport
biological_process GO:0015031 protein transport
cellular_component GO:0000815 ESCRT III complex
cellular_component GO:0005771 multivesicular body