HG10009849 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGAGCAAGAAGATTCCCTCCCCTGTTTCAAGAGATTTCAACATCGATGATTACATAGGCATGGAAAGTTGTGTCGATTTGAAAGATCACGACAAGGCGGCCGACATGTCGCCGGCGAAGAGCTTCCCCAAGGGAGGAAACAACAAAATGTGGGGAACAATGGGGAGGAAAGATCAGAAAGATTATCCTCCACCAATCCCATTGTTGGTTCGTACTGAGAATCTGGGTTCCCATATGCCATGGGTGATGAAACGGCACTGCACCGGCGACGGGCGGCTGATACTGACGGAAGAGAAAGTAAGACACCGTGAGTTCTTCCGTGCGCACAGATCCGATGGCCGGCTGATGCTGCAGCTTGTGGCTGTGGAGGAGCAGGTGGCTGAGGATCCGAATGTGGAAATGGGGGATGAGGACCGCGGTGAGGCGGCGGTGAGGCGACACGTCGGCCGCCTTACGATGGGCAAAGATGCAACGTTTATGTTGGGAGTGGCAGTGCCTGCAGGGAGCCTGAGGACCGTTCCAGGCTAA ATGCAGAGCAAGAAGATTCCCTCCCCTGTTTCAAGAGATTTCAACATCGATGATTACATAGGCATGGAAAGTTGTGTCGATTTGAAAGATCACGACAAGGCGGCCGACATGTCGCCGGCGAAGAGCTTCCCCAAGGGAGGAAACAACAAAATGTGGGGAACAATGGGGAGGAAAGATCAGAAAGATTATCCTCCACCAATCCCATTGTTGGTTCGTACTGAGAATCTGGGTTCCCATATGCCATGGGTGATGAAACGGCACTGCACCGGCGACGGGCGGCTGATACTGACGGAAGAGAAAGTAAGACACCGTGAGTTCTTCCGTGCGCACAGATCCGATGGCCGGCTGATGCTGCAGCTTGTGGCTGTGGAGGAGCAGGTGGCTGAGGATCCGAATGTGGAAATGGGGGATGAGGACCGCGGTGAGGCGGCGGTGAGGCGACACGTCGGCCGCCTTACGATGGGCAAAGATGCAACGTTTATGTTGGGAGTGGCAGTGCCTGCAGGGAGCCTGAGGACCGTTCCAGGCTAA ATGCAGAGCAAGAAGATTCCCTCCCCTGTTTCAAGAGATTTCAACATCGATGATTACATAGGCATGGAAAGTTGTGTCGATTTGAAAGATCACGACAAGGCGGCCGACATGTCGCCGGCGAAGAGCTTCCCCAAGGGAGGAAACAACAAAATGTGGGGAACAATGGGGAGGAAAGATCAGAAAGATTATCCTCCACCAATCCCATTGTTGGTTCGTACTGAGAATCTGGGTTCCCATATGCCATGGGTGATGAAACGGCACTGCACCGGCGACGGGCGGCTGATACTGACGGAAGAGAAAGTAAGACACCGTGAGTTCTTCCGTGCGCACAGATCCGATGGCCGGCTGATGCTGCAGCTTGTGGCTGTGGAGGAGCAGGTGGCTGAGGATCCGAATGTGGAAATGGGGGATGAGGACCGCGGTGAGGCGGCGGTGAGGCGACACGTCGGCCGCCTTACGATGGGCAAAGATGCAACGTTTATGTTGGGAGTGGCAGTGCCTGCAGGGAGCCTGAGGACCGTTCCAGGCTAA MQSKKIPSPVSRDFNIDDYIGMESCVDLKDHDKAADMSPAKSFPKGGNNKMWGTMGRKDQKDYPPPIPLLVRTENLGSHMPWVMKRHCTGDGRLILTEEKVRHREFFRAHRSDGRLMLQLVAVEEQVAEDPNVEMGDEDRGEAAVRRHVGRLTMGKDATFMLGVAVPAGSLRTVPG Homology
BLAST of HG10009849 vs. NCBI nr
Match: XP_038876069.1 (uncharacterized protein LOC120068390 [Benincasa hispida]) HSP 1 Score: 235.3 bits (599), Expect = 3.9e-58 Identity = 129/178 (72.47%), Postives = 137/178 (76.97%), Query Frame = 0
BLAST of HG10009849 vs. NCBI nr
Match: XP_022939970.1 (uncharacterized protein LOC111445672 [Cucurbita moschata]) HSP 1 Score: 212.6 bits (540), Expect = 2.7e-51 Identity = 114/184 (61.96%), Postives = 134/184 (72.83%), Query Frame = 0
BLAST of HG10009849 vs. NCBI nr
Match: XP_023551237.1 (uncharacterized protein LOC111809117 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 209.5 bits (532), Expect = 2.3e-50 Identity = 111/186 (59.68%), Postives = 130/186 (69.89%), Query Frame = 0
BLAST of HG10009849 vs. NCBI nr
Match: KAG6579017.1 (hypothetical protein SDJN03_23465, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 208.4 bits (529), Expect = 5.1e-50 Identity = 113/184 (61.41%), Postives = 132/184 (71.74%), Query Frame = 0
BLAST of HG10009849 vs. NCBI nr
Match: KAG7016540.1 (hypothetical protein SDJN02_21649 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 205.7 bits (522), Expect = 3.3e-49 Identity = 113/180 (62.78%), Postives = 131/180 (72.78%), Query Frame = 0
BLAST of HG10009849 vs. ExPASy TrEMBL
Match: A0A6J1FP95 (uncharacterized protein LOC111445672 OS=Cucurbita moschata OX=3662 GN=LOC111445672 PE=3 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 1.3e-51 Identity = 114/184 (61.96%), Postives = 134/184 (72.83%), Query Frame = 0
BLAST of HG10009849 vs. ExPASy TrEMBL
Match: A0A6J1JUP6 (uncharacterized protein LOC111489066 OS=Cucurbita maxima OX=3661 GN=LOC111489066 PE=3 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 1.0e-48 Identity = 109/188 (57.98%), Postives = 128/188 (68.09%), Query Frame = 0
BLAST of HG10009849 vs. ExPASy TrEMBL
Match: A0A6J1CJ12 (uncharacterized protein LOC111011804 OS=Momordica charantia OX=3673 GN=LOC111011804 PE=3 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 2.7e-44 Identity = 103/182 (56.59%), Postives = 126/182 (69.23%), Query Frame = 0
BLAST of HG10009849 vs. ExPASy TrEMBL
Match: A0A6J1JTI2 (uncharacterized protein LOC111487372 OS=Cucurbita maxima OX=3661 GN=LOC111487372 PE=3 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 9.4e-42 Identity = 102/178 (57.30%), Postives = 120/178 (67.42%), Query Frame = 0
BLAST of HG10009849 vs. ExPASy TrEMBL
Match: A0A6J1GVY4 (uncharacterized protein LOC111458031 OS=Cucurbita moschata OX=3662 GN=LOC111458031 PE=3 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 1.6e-41 Identity = 99/178 (55.62%), Postives = 122/178 (68.54%), Query Frame = 0
BLAST of HG10009849 vs. TAIR 10
Match: AT1G22110.1 (structural constituent of ribosome ) HSP 1 Score: 113.6 bits (283), Expect = 1.6e-25 Identity = 60/122 (49.18%), Postives = 77/122 (63.11%), Query Frame = 0
BLAST of HG10009849 vs. TAIR 10
Match: AT1G77932.1 (Protein of unknown function (DUF3049) ) HSP 1 Score: 71.6 bits (174), Expect = 7.0e-13 Identity = 34/59 (57.63%), Postives = 45/59 (76.27%), Query Frame = 0
BLAST of HG10009849 vs. TAIR 10
Match: AT5G22390.1 (Protein of unknown function (DUF3049) ) HSP 1 Score: 52.0 bits (123), Expect = 5.7e-07 Identity = 41/126 (32.54%), Postives = 58/126 (46.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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