HG10009831 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGAATTACATTTCTTGCACTCTGTCCACCCCAATCGGTGGCAAACCGTCCACTGCTTCGACGACGACTGTCATCTTTCCCAGCGGCCAAGTCCGACACTTTCACGAACCGGTCAAGGCGGCGGAGCTCATGTTCGAGATCCCTAATTTCTTCCTCGTCAATTCTCAGTCGGTTCATCCGGGTCGGAGGTTTTCGGCTCTGATGGCCGATGAGGATCTCGAGATGGGTAATTTGTACGTTATGTTTCCGATGAAGAAGGGCAATTCGGTGGTGTCTGTGACCGATATGGGAGCTTTGTTTCTCGCCGCCGAGCGGGTCTCCGGCGGGAAGAAGCGGCGGATTATGGGCGGTGGGGAATCTAATGTTTGTGTTTGGCCAGAGGTGGAAGCAGAGGAATCGAAACCCAAGTTGAAATTGGATGGTGTTGATGATGATGACGAGGACATGGAGGGGTTTTCGCCGGCACCGGAATTTGCTCATCGGAGGTCGATGTGCAGGTCGAGGAAGCCATTGTTGGAGACCATAGTTGAAGAGCCGATATGTTCAAGATGA ATGGGGAATTACATTTCTTGCACTCTGTCCACCCCAATCGGTGGCAAACCGTCCACTGCTTCGACGACGACTGTCATCTTTCCCAGCGGCCAAGTCCGACACTTTCACGAACCGGTCAAGGCGGCGGAGCTCATGTTCGAGATCCCTAATTTCTTCCTCGTCAATTCTCAGTCGGTTCATCCGGGTCGGAGGTTTTCGGCTCTGATGGCCGATGAGGATCTCGAGATGGGTAATTTGTACGTTATGTTTCCGATGAAGAAGGGCAATTCGGTGGTGTCTGTGACCGATATGGGAGCTTTGTTTCTCGCCGCCGAGCGGGTCTCCGGCGGGAAGAAGCGGCGGATTATGGGCGGTGGGGAATCTAATGTTTGTGTTTGGCCAGAGGTGGAAGCAGAGGAATCGAAACCCAAGTTGAAATTGGATGGTGTTGATGATGATGACGAGGACATGGAGGGGTTTTCGCCGGCACCGGAATTTGCTCATCGGAGGTCGATGTGCAGGTCGAGGAAGCCATTGTTGGAGACCATAGTTGAAGAGCCGATATGTTCAAGATGA ATGGGGAATTACATTTCTTGCACTCTGTCCACCCCAATCGGTGGCAAACCGTCCACTGCTTCGACGACGACTGTCATCTTTCCCAGCGGCCAAGTCCGACACTTTCACGAACCGGTCAAGGCGGCGGAGCTCATGTTCGAGATCCCTAATTTCTTCCTCGTCAATTCTCAGTCGGTTCATCCGGGTCGGAGGTTTTCGGCTCTGATGGCCGATGAGGATCTCGAGATGGGTAATTTGTACGTTATGTTTCCGATGAAGAAGGGCAATTCGGTGGTGTCTGTGACCGATATGGGAGCTTTGTTTCTCGCCGCCGAGCGGGTCTCCGGCGGGAAGAAGCGGCGGATTATGGGCGGTGGGGAATCTAATGTTTGTGTTTGGCCAGAGGTGGAAGCAGAGGAATCGAAACCCAAGTTGAAATTGGATGGTGTTGATGATGATGACGAGGACATGGAGGGGTTTTCGCCGGCACCGGAATTTGCTCATCGGAGGTCGATGTGCAGGTCGAGGAAGCCATTGTTGGAGACCATAGTTGAAGAGCCGATATGTTCAAGATGA MGNYISCTLSTPIGGKPSTASTTTVIFPSGQVRHFHEPVKAAELMFEIPNFFLVNSQSVHPGRRFSALMADEDLEMGNLYVMFPMKKGNSVVSVTDMGALFLAAERVSGGKKRRIMGGGESNVCVWPEVEAEESKPKLKLDGVDDDDEDMEGFSPAPEFAHRRSMCRSRKPLLETIVEEPICSR Homology
BLAST of HG10009831 vs. NCBI nr
Match: XP_038876498.1 (uncharacterized protein LOC120068930 [Benincasa hispida]) HSP 1 Score: 343.6 bits (880), Expect = 1.1e-90 Identity = 170/184 (92.39%), Postives = 177/184 (96.20%), Query Frame = 0
BLAST of HG10009831 vs. NCBI nr
Match: XP_011656216.1 (uncharacterized protein LOC105435675 [Cucumis sativus] >KGN51040.1 hypothetical protein Csa_008425 [Cucumis sativus]) HSP 1 Score: 331.3 bits (848), Expect = 5.5e-87 Identity = 163/185 (88.11%), Postives = 172/185 (92.97%), Query Frame = 0
BLAST of HG10009831 vs. NCBI nr
Match: XP_008460510.1 (PREDICTED: uncharacterized protein LOC103499309 [Cucumis melo]) HSP 1 Score: 324.3 bits (830), Expect = 6.7e-85 Identity = 159/187 (85.03%), Postives = 170/187 (90.91%), Query Frame = 0
BLAST of HG10009831 vs. NCBI nr
Match: KAA0062355.1 (uncharacterized protein E6C27_scaffold154G001210 [Cucumis melo var. makuwa] >TYK26622.1 uncharacterized protein E5676_scaffold313G002630 [Cucumis melo var. makuwa]) HSP 1 Score: 320.1 bits (819), Expect = 1.3e-83 Identity = 157/183 (85.79%), Postives = 167/183 (91.26%), Query Frame = 0
BLAST of HG10009831 vs. NCBI nr
Match: XP_022990804.1 (uncharacterized protein LOC111487586 [Cucurbita maxima]) HSP 1 Score: 291.2 bits (744), Expect = 6.3e-75 Identity = 146/183 (79.78%), Postives = 161/183 (87.98%), Query Frame = 0
BLAST of HG10009831 vs. ExPASy TrEMBL
Match: A0A0A0KN52 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G416270 PE=4 SV=1) HSP 1 Score: 331.3 bits (848), Expect = 2.6e-87 Identity = 163/185 (88.11%), Postives = 172/185 (92.97%), Query Frame = 0
BLAST of HG10009831 vs. ExPASy TrEMBL
Match: A0A1S3CCM8 (uncharacterized protein LOC103499309 OS=Cucumis melo OX=3656 GN=LOC103499309 PE=4 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 3.2e-85 Identity = 159/187 (85.03%), Postives = 170/187 (90.91%), Query Frame = 0
BLAST of HG10009831 vs. ExPASy TrEMBL
Match: A0A5D3DT24 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002630 PE=4 SV=1) HSP 1 Score: 320.1 bits (819), Expect = 6.1e-84 Identity = 157/183 (85.79%), Postives = 167/183 (91.26%), Query Frame = 0
BLAST of HG10009831 vs. ExPASy TrEMBL
Match: A0A6J1JT13 (uncharacterized protein LOC111487586 OS=Cucurbita maxima OX=3661 GN=LOC111487586 PE=4 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 3.0e-75 Identity = 146/183 (79.78%), Postives = 161/183 (87.98%), Query Frame = 0
BLAST of HG10009831 vs. ExPASy TrEMBL
Match: A0A6J1H4S2 (uncharacterized protein LOC111460504 OS=Cucurbita moschata OX=3662 GN=LOC111460504 PE=4 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 8.3e-73 Identity = 142/183 (77.60%), Postives = 158/183 (86.34%), Query Frame = 0
BLAST of HG10009831 vs. TAIR 10
Match: AT5G17350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 124.8 bits (312), Expect = 7.2e-29 Identity = 79/194 (40.72%), Postives = 115/194 (59.28%), Query Frame = 0
BLAST of HG10009831 vs. TAIR 10
Match: AT3G03280.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17350.1); Has 137 Blast hits to 137 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 124.0 bits (310), Expect = 1.2e-28 Identity = 79/183 (43.17%), Postives = 108/183 (59.02%), Query Frame = 0
BLAST of HG10009831 vs. TAIR 10
Match: AT4G37240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 52.0 bits (123), Expect = 6.0e-07 Identity = 35/127 (27.56%), Postives = 59/127 (46.46%), Query Frame = 0
BLAST of HG10009831 vs. TAIR 10
Match: AT2G23690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37240.1); Has 243 Blast hits to 243 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 48.1 bits (113), Expect = 8.6e-06 Identity = 27/93 (29.03%), Postives = 45/93 (48.39%), Query Frame = 0
BLAST of HG10009831 vs. TAIR 10
Match: AT5G66580.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 44.3 bits (103), Expect = 1.2e-04 Identity = 26/94 (27.66%), Postives = 45/94 (47.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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