Homology
BLAST of HG10009807 vs. NCBI nr
Match:
XP_038874852.1 (DNA repair protein RAD4 isoform X2 [Benincasa hispida])
HSP 1 Score: 1761.9 bits (4562), Expect = 0.0e+00
Identity = 904/981 (92.15%), Postives = 931/981 (94.90%), Query Frame = 0
Query: 1 MRRRKQSQRPKKSSGIEDAVEAIPDSGGSCSQTSTDGGTLANVSRVAVGKLLSRVSGRCL 60
M+ RKQS+RPKKSSGIEDA +AIPDSGGSCSQTSTD GTLANVSR+AVGKLLSR SGR L
Sbjct: 1 MQGRKQSKRPKKSSGIEDAGDAIPDSGGSCSQTSTDRGTLANVSRMAVGKLLSRASGRRL 60
Query: 61 SGTRQHALHPCDLVRKPKSTIGKDVNPAVDKKVTLEAERCNENVTASCSVDVDVHEVNLQ 120
SG R+HALHPCDL PKST+GKD N A+DKKV LEAE C ENV SCS+D DV EVNLQ
Sbjct: 61 SGKRKHALHPCDL---PKSTVGKDENAAMDKKVKLEAETCIENVIVSCSMDDDVREVNLQ 120
Query: 121 NYVSEVLEDLDDSDWEDGCVRTLDGTESHPLTIEFSEMQQTADSTRRKPIRRASAADKEI 180
N VSEVLEDLDDSDWEDGCV TLDGTESHPLTIEFSEMQQT DSTRRKPIRRASAADKEI
Sbjct: 121 NPVSEVLEDLDDSDWEDGCVHTLDGTESHPLTIEFSEMQQTPDSTRRKPIRRASAADKEI 180
Query: 181 AEFVHKVHLLCLLGRGRLIDRACNDPLIQSALLSLLPAHLLKMSPAKQLTASSLKPLVTW 240
AEFVHKVHLLCLLGRGRLIDRACNDP+IQSALLSLLPAHLLK+SPAKQLTASSLKPLVTW
Sbjct: 181 AEFVHKVHLLCLLGRGRLIDRACNDPIIQSALLSLLPAHLLKISPAKQLTASSLKPLVTW 240
Query: 241 LHNNFRVRNQTRSEGSINSALACALETHEGTLEEIAALTVVLFRALDLTTRFVSILDVAP 300
LHNNFRVRNQTRSE SI+SALA ALETHEGT EEIAALTVVLFRALDLTTRFVSILDVAP
Sbjct: 241 LHNNFRVRNQTRSECSIDSALARALETHEGTSEEIAALTVVLFRALDLTTRFVSILDVAP 300
Query: 301 IKPEAERSNYNQETSRSSRNIFKNSTLMVDKAEPVDKDSPTSRCLDKKDYLRKSTSGDKC 360
IKPEAERS Y+QETSRSSRN+FKNSTLMVDKAEPVDKDSP RCLDKKD LRKSTSGD C
Sbjct: 301 IKPEAERSKYSQETSRSSRNLFKNSTLMVDKAEPVDKDSP-PRCLDKKDNLRKSTSGDNC 360
Query: 361 ESNAVNLAGKKTHVLDELSCTTSSTCNTKADIPETFPPNNSQVLKRKGDIEFEMQLQMAL 420
ESNAV+LAGKKTHV DELSCTTSS+CNTK DIPETFPPNNSQVLKRKGDIEFEMQLQMAL
Sbjct: 361 ESNAVHLAGKKTHVPDELSCTTSSSCNTKPDIPETFPPNNSQVLKRKGDIEFEMQLQMAL 420
Query: 421 SATAVETMPRNSSINYSNEPPLNFPSPKKLKRTVNEESASSSHGISTAVGSSKEGSPLYW 480
SATAVETMPRNSSINYSN PPLNFPSPK LKRTVNEESASSSHGISTAVGSSKEGSPLYW
Sbjct: 421 SATAVETMPRNSSINYSNGPPLNFPSPKNLKRTVNEESASSSHGISTAVGSSKEGSPLYW 480
Query: 481 AEVYCNAENLTGKWVHVDAVNMVVDGEHKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYC 540
AEVYCNAENLTGKWVH+DAVNMVVDGEHKVEDL AACKTSL YVVAFSGLGAKDVTRRYC
Sbjct: 481 AEVYCNAENLTGKWVHIDAVNMVVDGEHKVEDLTAACKTSLSYVVAFSGLGAKDVTRRYC 540
Query: 541 MKWYKIETKRVNALWWENVLAPLRILEGQAVGGTGHLEKRCIDGLMEQDKLKMSDLSDNL 600
MKWYKIETKRVNALWW+NVLAPLRILEGQAVGGTGHLEK CIDGLMEQDKL MSDLSDNL
Sbjct: 541 MKWYKIETKRVNALWWDNVLAPLRILEGQAVGGTGHLEKSCIDGLMEQDKLNMSDLSDNL 600
Query: 601 KQKNLLDDGNQPGKSDHNVSEGLDTDRDSSMGNQFVATRDHLEDIELETRALTEPLPTNQ 660
KQKNLLD GNQPGKSDHNVSE LDT+RD S+GNQFVATRDHLEDIELETRALTEPLPTNQ
Sbjct: 601 KQKNLLDAGNQPGKSDHNVSEELDTNRD-SLGNQFVATRDHLEDIELETRALTEPLPTNQ 660
Query: 661 QAYKNHRLYALEKWLTKYQMLHPKGPVLGFCSGHPVYPRTCVQMLKTKQKWLREGLQVKS 720
QAYKNHRLYALEKWLTKYQMLHPKGPVLGFCSGHPVYPRTCVQMLKTKQKWLREGLQVKS
Sbjct: 661 QAYKNHRLYALEKWLTKYQMLHPKGPVLGFCSGHPVYPRTCVQMLKTKQKWLREGLQVKS 720
Query: 721 NELPVKELKRSIRKIKVLESEADDFDQGDSQGVIQLYGKWQLEPLQLPRAINGIVPKNER 780
NELPVKELKRS++KIK+LESEADDFDQGDSQGVI LYGKWQLEPLQLPRAINGIVPKNER
Sbjct: 721 NELPVKELKRSMKKIKILESEADDFDQGDSQGVIPLYGKWQLEPLQLPRAINGIVPKNER 780
Query: 781 GQVDVWSEKCLPPGTVHIRLPRVFSVAKRLEIDYAPAMVAFEFRNGRSYPIYDGIVVCSE 840
GQVDVWSEKCLPPGTVHIRLPRVF VAKRLEIDYAPAMV FEFRNGRSYPIYDGIVVCSE
Sbjct: 781 GQVDVWSEKCLPPGTVHIRLPRVFRVAKRLEIDYAPAMVGFEFRNGRSYPIYDGIVVCSE 840
Query: 841 FKDVILEAYTEEAERMEAEERRWREKQAISRWYQLLSSILTRQRLNSRYGDSENPSQVAS 900
FKDVILEAYTEEAERMEAEERR REKQAISRWYQLLSSI+TRQRLNSRYGDSENPSQV S
Sbjct: 841 FKDVILEAYTEEAERMEAEERRHREKQAISRWYQLLSSIITRQRLNSRYGDSENPSQVVS 900
Query: 901 DVRGSHDKGNAD--IPSCQDDAEPFERQQDNVSDTNMDSPSFINQEDHRHVFLLEDQIFD 960
DVR +HDKGNAD IPSCQDDAEPFE QQDNVS+TNMD+PSFINQ DH+HVFLLEDQIFD
Sbjct: 901 DVRSTHDKGNADIRIPSCQDDAEPFEHQQDNVSNTNMDAPSFINQ-DHKHVFLLEDQIFD 960
Query: 961 EKSLVVTKRCHCGFSVQVEEL 980
EKSLVVTKRCHCGFSVQVEEL
Sbjct: 961 EKSLVVTKRCHCGFSVQVEEL 975
BLAST of HG10009807 vs. NCBI nr
Match:
XP_038874851.1 (DNA repair protein RAD4 isoform X1 [Benincasa hispida])
HSP 1 Score: 1748.4 bits (4527), Expect = 0.0e+00
Identity = 904/1005 (89.95%), Postives = 931/1005 (92.64%), Query Frame = 0
Query: 1 MRRRKQSQRPKKSSGIEDAVEAIPDSGGSCSQTSTDGGTLANVSRVAVGKLLSRVSGRCL 60
M+ RKQS+RPKKSSGIEDA +AIPDSGGSCSQTSTD GTLANVSR+AVGKLLSR SGR L
Sbjct: 1 MQGRKQSKRPKKSSGIEDAGDAIPDSGGSCSQTSTDRGTLANVSRMAVGKLLSRASGRRL 60
Query: 61 SGTRQHALHPCDLVRKPKSTIGKDVNPAVDKKVTLEAERCNENVTASCSVDVDVHEVNLQ 120
SG R+HALHPCDL PKST+GKD N A+DKKV LEAE C ENV SCS+D DV EVNLQ
Sbjct: 61 SGKRKHALHPCDL---PKSTVGKDENAAMDKKVKLEAETCIENVIVSCSMDDDVREVNLQ 120
Query: 121 NYVSEVLEDLDDSDWEDGCVRTLDGTESHPLTIEFSEMQQTADSTRRKPIRRASAADKEI 180
N VSEVLEDLDDSDWEDGCV TLDGTESHPLTIEFSEMQQT DSTRRKPIRRASAADKEI
Sbjct: 121 NPVSEVLEDLDDSDWEDGCVHTLDGTESHPLTIEFSEMQQTPDSTRRKPIRRASAADKEI 180
Query: 181 AEFVHKVHLLCLLGRGRLIDRACNDP------------------------LIQSALLSLL 240
AEFVHKVHLLCLLGRGRLIDRACNDP L+QSALLSLL
Sbjct: 181 AEFVHKVHLLCLLGRGRLIDRACNDPIIQFLLVEEIQGHIISFVLRTISLLLQSALLSLL 240
Query: 241 PAHLLKMSPAKQLTASSLKPLVTWLHNNFRVRNQTRSEGSINSALACALETHEGTLEEIA 300
PAHLLK+SPAKQLTASSLKPLVTWLHNNFRVRNQTRSE SI+SALA ALETHEGT EEIA
Sbjct: 241 PAHLLKISPAKQLTASSLKPLVTWLHNNFRVRNQTRSECSIDSALARALETHEGTSEEIA 300
Query: 301 ALTVVLFRALDLTTRFVSILDVAPIKPEAERSNYNQETSRSSRNIFKNSTLMVDKAEPVD 360
ALTVVLFRALDLTTRFVSILDVAPIKPEAERS Y+QETSRSSRN+FKNSTLMVDKAEPVD
Sbjct: 301 ALTVVLFRALDLTTRFVSILDVAPIKPEAERSKYSQETSRSSRNLFKNSTLMVDKAEPVD 360
Query: 361 KDSPTSRCLDKKDYLRKSTSGDKCESNAVNLAGKKTHVLDELSCTTSSTCNTKADIPETF 420
KDSP RCLDKKD LRKSTSGD CESNAV+LAGKKTHV DELSCTTSS+CNTK DIPETF
Sbjct: 361 KDSP-PRCLDKKDNLRKSTSGDNCESNAVHLAGKKTHVPDELSCTTSSSCNTKPDIPETF 420
Query: 421 PPNNSQVLKRKGDIEFEMQLQMALSATAVETMPRNSSINYSNEPPLNFPSPKKLKRTVNE 480
PPNNSQVLKRKGDIEFEMQLQMALSATAVETMPRNSSINYSN PPLNFPSPK LKRTVNE
Sbjct: 421 PPNNSQVLKRKGDIEFEMQLQMALSATAVETMPRNSSINYSNGPPLNFPSPKNLKRTVNE 480
Query: 481 ESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHVDAVNMVVDGEHKVEDLAAA 540
ESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVH+DAVNMVVDGEHKVEDL AA
Sbjct: 481 ESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHIDAVNMVVDGEHKVEDLTAA 540
Query: 541 CKTSLRYVVAFSGLGAKDVTRRYCMKWYKIETKRVNALWWENVLAPLRILEGQAVGGTGH 600
CKTSL YVVAFSGLGAKDVTRRYCMKWYKIETKRVNALWW+NVLAPLRILEGQAVGGTGH
Sbjct: 541 CKTSLSYVVAFSGLGAKDVTRRYCMKWYKIETKRVNALWWDNVLAPLRILEGQAVGGTGH 600
Query: 601 LEKRCIDGLMEQDKLKMSDLSDNLKQKNLLDDGNQPGKSDHNVSEGLDTDRDSSMGNQFV 660
LEK CIDGLMEQDKL MSDLSDNLKQKNLLD GNQPGKSDHNVSE LDT+RD S+GNQFV
Sbjct: 601 LEKSCIDGLMEQDKLNMSDLSDNLKQKNLLDAGNQPGKSDHNVSEELDTNRD-SLGNQFV 660
Query: 661 ATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPKGPVLGFCSGHPV 720
ATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPKGPVLGFCSGHPV
Sbjct: 661 ATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPKGPVLGFCSGHPV 720
Query: 721 YPRTCVQMLKTKQKWLREGLQVKSNELPVKELKRSIRKIKVLESEADDFDQGDSQGVIQL 780
YPRTCVQMLKTKQKWLREGLQVKSNELPVKELKRS++KIK+LESEADDFDQGDSQGVI L
Sbjct: 721 YPRTCVQMLKTKQKWLREGLQVKSNELPVKELKRSMKKIKILESEADDFDQGDSQGVIPL 780
Query: 781 YGKWQLEPLQLPRAINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVAKRLEIDYAP 840
YGKWQLEPLQLPRAINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVF VAKRLEIDYAP
Sbjct: 781 YGKWQLEPLQLPRAINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFRVAKRLEIDYAP 840
Query: 841 AMVAFEFRNGRSYPIYDGIVVCSEFKDVILEAYTEEAERMEAEERRWREKQAISRWYQLL 900
AMV FEFRNGRSYPIYDGIVVCSEFKDVILEAYTEEAERMEAEERR REKQAISRWYQLL
Sbjct: 841 AMVGFEFRNGRSYPIYDGIVVCSEFKDVILEAYTEEAERMEAEERRHREKQAISRWYQLL 900
Query: 901 SSILTRQRLNSRYGDSENPSQVASDVRGSHDKGNAD--IPSCQDDAEPFERQQDNVSDTN 960
SSI+TRQRLNSRYGDSENPSQV SDVR +HDKGNAD IPSCQDDAEPFE QQDNVS+TN
Sbjct: 901 SSIITRQRLNSRYGDSENPSQVVSDVRSTHDKGNADIRIPSCQDDAEPFEHQQDNVSNTN 960
Query: 961 MDSPSFINQEDHRHVFLLEDQIFDEKSLVVTKRCHCGFSVQVEEL 980
MD+PSFINQ DH+HVFLLEDQIFDEKSLVVTKRCHCGFSVQVEEL
Sbjct: 961 MDAPSFINQ-DHKHVFLLEDQIFDEKSLVVTKRCHCGFSVQVEEL 999
BLAST of HG10009807 vs. NCBI nr
Match:
XP_008460536.1 (PREDICTED: DNA repair protein RAD4 isoform X4 [Cucumis melo])
HSP 1 Score: 1691.8 bits (4380), Expect = 0.0e+00
Identity = 871/998 (87.27%), Postives = 910/998 (91.18%), Query Frame = 0
Query: 1 MRRRKQSQRPKKSSGIEDAVEAIPDSGGSCSQTSTDGGTLANVSRVAVGKLLSRVSGRCL 60
MR RKQSQ+PKKSSGI+DA EAIPD GGSCSQTS D TLANVSRVAV KLLSR SGRCL
Sbjct: 1 MRGRKQSQQPKKSSGIKDAGEAIPDPGGSCSQTSIDRETLANVSRVAVSKLLSRASGRCL 60
Query: 61 SGTRQHALHPCDLVRKPKSTIGKDVNPAVDKKVTLEAERCNENVTASCSVDVDVHEVNLQ 120
SG R+HAL PCDL KSTIGKDVN A+DKKVTLEAERCNENVTASCS DVDVHEVNLQ
Sbjct: 61 SGMRKHALRPCDL---SKSTIGKDVNLAMDKKVTLEAERCNENVTASCSEDVDVHEVNLQ 120
Query: 121 NYVSEVLEDLDDSDWEDGCVRTLDGTESHPLTIEFSEMQQTADSTRRKPIRRASAADKEI 180
N VSEVLEDL DSDWEDGCV+T DGTES PLTIE SE+Q+ DST+RKPIRRASAADKEI
Sbjct: 121 NSVSEVLEDLYDSDWEDGCVQTSDGTESQPLTIEISEIQEIPDSTKRKPIRRASAADKEI 180
Query: 181 AEFVHKVHLLCLLGRGRLIDRACNDPLIQSALLSLLPAHLLKMSPAKQLTASSLKPLVTW 240
EFVHKVHLLCLLGRGRLIDRACNDPLIQ+ALLSLLPAHLLK+SPAKQLTASSLKPLV W
Sbjct: 181 TEFVHKVHLLCLLGRGRLIDRACNDPLIQAALLSLLPAHLLKISPAKQLTASSLKPLVAW 240
Query: 241 LHNNFRVRNQTRSEGSINSALACALETHEGTLEEIAALTVVLFRALDLTTRFVSILDVAP 300
+HNNF VRNQTRSEGSINSALA ALETHEGT EEIAALTVVLFRALD+T RFVSILDVAP
Sbjct: 241 MHNNFHVRNQTRSEGSINSALAHALETHEGTSEEIAALTVVLFRALDITARFVSILDVAP 300
Query: 301 IKPEAERSN-YNQETSRSSRNIFKNSTLMVDKAEPVDKDSPTSRCLDKKDYLRKSTSGDK 360
IKPEAERS ++Q+TSRSSRNIFKNSTLMVDKAE VDKDS TS CLDKKD RK TSGD
Sbjct: 301 IKPEAERSKCFSQDTSRSSRNIFKNSTLMVDKAEAVDKDSLTSHCLDKKDNPRKRTSGDN 360
Query: 361 CESNAVNLAGKKTHVLDELSCTTSSTCNTKADIPETFPPNNSQVLKRKGDIEFEMQLQMA 420
ESNAVNL GKK HVLD+LS TTSS CN+K DI ETFP NSQV KRKGDIEFEMQLQMA
Sbjct: 361 RESNAVNLVGKKLHVLDDLSSTTSSNCNSKPDISETFPLKNSQVQKRKGDIEFEMQLQMA 420
Query: 421 LSATAVETMPRNSSINYSNEPPLNFPSPKKLKRTVNEESASSSHGISTAVGSSKEGSPLY 480
LSATAVETMPRNSSIN+SNEPPLNF SPKKLKR NEESASSSHGISTAVGSSKEGSPLY
Sbjct: 421 LSATAVETMPRNSSINHSNEPPLNFTSPKKLKRIDNEESASSSHGISTAVGSSKEGSPLY 480
Query: 481 WAEVYCNAENLTGKWVHVDAVNMVVDGEHKVEDLAAACKTSLRYVVAFSGLGAKDVTRRY 540
WAEVYCNAENLTGKWVH+DAVNMVVDGEHKVEDLAAACKTSLRYVVAFSGLGAKDVTRRY
Sbjct: 481 WAEVYCNAENLTGKWVHIDAVNMVVDGEHKVEDLAAACKTSLRYVVAFSGLGAKDVTRRY 540
Query: 541 CMKWYKIETKRVNALWWENVLAPLRILEGQAVGGTGHLEKRCIDGLMEQDKLKMSDLSDN 600
CMKWYKIE KRVN LWW+NVLAPLRILE QAVGGTGHLEK CIDGL EQDKLKMSDLSDN
Sbjct: 541 CMKWYKIEAKRVNTLWWDNVLAPLRILERQAVGGTGHLEKCCIDGLREQDKLKMSDLSDN 600
Query: 601 LKQKNLLDDGNQPGKSDHNVSEGLDTDRDSSMGNQFVATRDHLEDIELETRALTEPLPTN 660
LKQKNLLDDGNQ GKSDHNVSEGLDTDRD S+GNQFVATRDHLEDIELETRALTEPLPTN
Sbjct: 601 LKQKNLLDDGNQSGKSDHNVSEGLDTDRDFSLGNQFVATRDHLEDIELETRALTEPLPTN 660
Query: 661 QQAYKNHRLYALEKWLTKYQMLHPKGPVLGFCSGHPVYPRTCVQMLKTKQKWLREGLQVK 720
QQAYKNHRLYALEKWLTKYQ+LHPKGPVLGFCSG+PVYPRTCVQ+LKTKQKWLREGLQVK
Sbjct: 661 QQAYKNHRLYALEKWLTKYQILHPKGPVLGFCSGYPVYPRTCVQVLKTKQKWLREGLQVK 720
Query: 721 SNELPVKELKRSIRKIKVLESEADDFDQGDSQGVIQLYGKWQLEPLQLPRAINGIVPK-- 780
SNELPVKELKRSI+KIKVLESEADDFDQGDSQG I LYGKWQLEPLQLP A++GIVPK
Sbjct: 721 SNELPVKELKRSIKKIKVLESEADDFDQGDSQGTIPLYGKWQLEPLQLPHAVDGIVPKAR 780
Query: 781 ----------------NERGQVDVWSEKCLPPGTVHIRLPRVFSVAKRLEIDYAPAMVAF 840
NERGQVDVWSEKCLPPGTVHIRLPRVFSVAK+LEIDYAPA+V F
Sbjct: 781 KYSSFIKNYTILSIPLNERGQVDVWSEKCLPPGTVHIRLPRVFSVAKKLEIDYAPALVGF 840
Query: 841 EFRNGRSYPIYDGIVVCSEFKDVILEAYTEEAERMEAEERRWREKQAISRWYQLLSSILT 900
EFRNGRSYPIYDGIVVCSEFKDVILE Y EEAERMEAEERR REKQAISRWYQLLSSI+T
Sbjct: 841 EFRNGRSYPIYDGIVVCSEFKDVILETYNEEAERMEAEERRQREKQAISRWYQLLSSIIT 900
Query: 901 RQRLNSRYGDSENPSQVASDVRGSHDKGNADIPSCQDDAEPFERQQDNVSDTNMDSPSFI 960
RQRLNSRYGDSENPSQV S ++G HD+GNAD+PSCQ+DAEPF+ QQDNVS+ NMDSPSFI
Sbjct: 901 RQRLNSRYGDSENPSQVVSGIQGMHDEGNADVPSCQEDAEPFKGQQDNVSNPNMDSPSFI 960
Query: 961 NQEDHRHVFLLEDQIFDEKSLVVTKRCHCGFSVQVEEL 980
NQEDH+HVFLLED+IFDEKSLVVTKRCHCGFSVQVEEL
Sbjct: 961 NQEDHKHVFLLEDRIFDEKSLVVTKRCHCGFSVQVEEL 995
BLAST of HG10009807 vs. NCBI nr
Match:
XP_008460535.1 (PREDICTED: DNA repair protein RAD4 isoform X3 [Cucumis melo])
HSP 1 Score: 1689.9 bits (4375), Expect = 0.0e+00
Identity = 872/1011 (86.25%), Postives = 911/1011 (90.11%), Query Frame = 0
Query: 1 MRRRKQSQRPKKSSGIEDAVEAIPDSGGSCSQTSTDGG---------------------- 60
MR RKQSQ+PKKSSGI+DA EAIPD GGSCSQTS D G
Sbjct: 1 MRGRKQSQQPKKSSGIKDAGEAIPDPGGSCSQTSIDRGVFWSINCLFFLFFEKLFLLGLR 60
Query: 61 ---------TLANVSRVAVGKLLSRVSGRCLSGTRQHALHPCDLVRKPKSTIGKDVNPAV 120
TLANVSRVAV KLLSR SGRCLSG R+HAL PCDL KSTIGKDVN A+
Sbjct: 61 HHLCFFFLETLANVSRVAVSKLLSRASGRCLSGMRKHALRPCDL---SKSTIGKDVNLAM 120
Query: 121 DKKVTLEAERCNENVTASCSVDVDVHEVNLQNYVSEVLEDLDDSDWEDGCVRTLDGTESH 180
DKKVTLEAERCNENVTASCS DVDVHEVNLQN VSEVLEDL DSDWEDGCV+T DGTES
Sbjct: 121 DKKVTLEAERCNENVTASCSEDVDVHEVNLQNSVSEVLEDLYDSDWEDGCVQTSDGTESQ 180
Query: 181 PLTIEFSEMQQTADSTRRKPIRRASAADKEIAEFVHKVHLLCLLGRGRLIDRACNDPLIQ 240
PLTIE SE+Q+ DST+RKPIRRASAADKEI EFVHKVHLLCLLGRGRLIDRACNDPLIQ
Sbjct: 181 PLTIEISEIQEIPDSTKRKPIRRASAADKEITEFVHKVHLLCLLGRGRLIDRACNDPLIQ 240
Query: 241 SALLSLLPAHLLKMSPAKQLTASSLKPLVTWLHNNFRVRNQTRSEGSINSALACALETHE 300
+ALLSLLPAHLLK+SPAKQLTASSLKPLV W+HNNF VRNQTRSEGSINSALA ALETHE
Sbjct: 241 AALLSLLPAHLLKISPAKQLTASSLKPLVAWMHNNFHVRNQTRSEGSINSALAHALETHE 300
Query: 301 GTLEEIAALTVVLFRALDLTTRFVSILDVAPIKPEAERSN-YNQETSRSSRNIFKNSTLM 360
GT EEIAALTVVLFRALD+T RFVSILDVAPIKPEAERS ++Q+TSRSSRNIFKNSTLM
Sbjct: 301 GTSEEIAALTVVLFRALDITARFVSILDVAPIKPEAERSKCFSQDTSRSSRNIFKNSTLM 360
Query: 361 VDKAEPVDKDSPTSRCLDKKDYLRKSTSGDKCESNAVNLAGKKTHVLDELSCTTSSTCNT 420
VDKAE VDKDS TS CLDKKD RK TSGD ESNAVNL GKK HVLD+LS TTSS CN+
Sbjct: 361 VDKAEAVDKDSLTSHCLDKKDNPRKRTSGDNRESNAVNLVGKKLHVLDDLSSTTSSNCNS 420
Query: 421 KADIPETFPPNNSQVLKRKGDIEFEMQLQMALSATAVETMPRNSSINYSNEPPLNFPSPK 480
K DI ETFP NSQV KRKGDIEFEMQLQMALSATAVETMPRNSSIN+SNEPPLNF SPK
Sbjct: 421 KPDISETFPLKNSQVQKRKGDIEFEMQLQMALSATAVETMPRNSSINHSNEPPLNFTSPK 480
Query: 481 KLKRTVNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHVDAVNMVVDGEH 540
KLKR NEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVH+DAVNMVVDGEH
Sbjct: 481 KLKRIDNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHIDAVNMVVDGEH 540
Query: 541 KVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIETKRVNALWWENVLAPLRILEG 600
KVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIE KRVN LWW+NVLAPLRILE
Sbjct: 541 KVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIEAKRVNTLWWDNVLAPLRILER 600
Query: 601 QAVGGTGHLEKRCIDGLMEQDKLKMSDLSDNLKQKNLLDDGNQPGKSDHNVSEGLDTDRD 660
QAVGGTGHLEK CIDGL EQDKLKMSDLSDNLKQKNLLDDGNQ GKSDHNVSEGLDTDRD
Sbjct: 601 QAVGGTGHLEKCCIDGLREQDKLKMSDLSDNLKQKNLLDDGNQSGKSDHNVSEGLDTDRD 660
Query: 661 SSMGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPKGPVL 720
S+GNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQ+LHPKGPVL
Sbjct: 661 FSLGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQILHPKGPVL 720
Query: 721 GFCSGHPVYPRTCVQMLKTKQKWLREGLQVKSNELPVKELKRSIRKIKVLESEADDFDQG 780
GFCSG+PVYPRTCVQ+LKTKQKWLREGLQVKSNELPVKELKRSI+KIKVLESEADDFDQG
Sbjct: 721 GFCSGYPVYPRTCVQVLKTKQKWLREGLQVKSNELPVKELKRSIKKIKVLESEADDFDQG 780
Query: 781 DSQGVIQLYGKWQLEPLQLPRAINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVAK 840
DSQG I LYGKWQLEPLQLP A++GIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVAK
Sbjct: 781 DSQGTIPLYGKWQLEPLQLPHAVDGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVAK 840
Query: 841 RLEIDYAPAMVAFEFRNGRSYPIYDGIVVCSEFKDVILEAYTEEAERMEAEERRWREKQA 900
+LEIDYAPA+V FEFRNGRSYPIYDGIVVCSEFKDVILE Y EEAERMEAEERR REKQA
Sbjct: 841 KLEIDYAPALVGFEFRNGRSYPIYDGIVVCSEFKDVILETYNEEAERMEAEERRQREKQA 900
Query: 901 ISRWYQLLSSILTRQRLNSRYGDSENPSQVASDVRGSHDKGNADIPSCQDDAEPFERQQD 960
ISRWYQLLSSI+TRQRLNSRYGDSENPSQV S ++G HD+GNAD+PSCQ+DAEPF+ QQD
Sbjct: 901 ISRWYQLLSSIITRQRLNSRYGDSENPSQVVSGIQGMHDEGNADVPSCQEDAEPFKGQQD 960
Query: 961 NVSDTNMDSPSFINQEDHRHVFLLEDQIFDEKSLVVTKRCHCGFSVQVEEL 980
NVS+ NMDSPSFINQEDH+HVFLLED+IFDEKSLVVTKRCHCGFSVQVEEL
Sbjct: 961 NVSNPNMDSPSFINQEDHKHVFLLEDRIFDEKSLVVTKRCHCGFSVQVEEL 1008
BLAST of HG10009807 vs. NCBI nr
Match:
XP_008460538.1 (PREDICTED: DNA repair protein RAD4 isoform X5 [Cucumis melo])
HSP 1 Score: 1684.1 bits (4360), Expect = 0.0e+00
Identity = 869/998 (87.07%), Postives = 908/998 (90.98%), Query Frame = 0
Query: 1 MRRRKQSQRPKKSSGIEDAVEAIPDSGGSCSQTSTDGGTLANVSRVAVGKLLSRVSGRCL 60
MR RKQSQ+PKKSSGI+DA EAIPD GGSCSQTS D ANVSRVAV KLLSR SGRCL
Sbjct: 1 MRGRKQSQQPKKSSGIKDAGEAIPDPGGSCSQTSID---RANVSRVAVSKLLSRASGRCL 60
Query: 61 SGTRQHALHPCDLVRKPKSTIGKDVNPAVDKKVTLEAERCNENVTASCSVDVDVHEVNLQ 120
SG R+HAL PCDL KSTIGKDVN A+DKKVTLEAERCNENVTASCS DVDVHEVNLQ
Sbjct: 61 SGMRKHALRPCDL---SKSTIGKDVNLAMDKKVTLEAERCNENVTASCSEDVDVHEVNLQ 120
Query: 121 NYVSEVLEDLDDSDWEDGCVRTLDGTESHPLTIEFSEMQQTADSTRRKPIRRASAADKEI 180
N VSEVLEDL DSDWEDGCV+T DGTES PLTIE SE+Q+ DST+RKPIRRASAADKEI
Sbjct: 121 NSVSEVLEDLYDSDWEDGCVQTSDGTESQPLTIEISEIQEIPDSTKRKPIRRASAADKEI 180
Query: 181 AEFVHKVHLLCLLGRGRLIDRACNDPLIQSALLSLLPAHLLKMSPAKQLTASSLKPLVTW 240
EFVHKVHLLCLLGRGRLIDRACNDPLIQ+ALLSLLPAHLLK+SPAKQLTASSLKPLV W
Sbjct: 181 TEFVHKVHLLCLLGRGRLIDRACNDPLIQAALLSLLPAHLLKISPAKQLTASSLKPLVAW 240
Query: 241 LHNNFRVRNQTRSEGSINSALACALETHEGTLEEIAALTVVLFRALDLTTRFVSILDVAP 300
+HNNF VRNQTRSEGSINSALA ALETHEGT EEIAALTVVLFRALD+T RFVSILDVAP
Sbjct: 241 MHNNFHVRNQTRSEGSINSALAHALETHEGTSEEIAALTVVLFRALDITARFVSILDVAP 300
Query: 301 IKPEAERSN-YNQETSRSSRNIFKNSTLMVDKAEPVDKDSPTSRCLDKKDYLRKSTSGDK 360
IKPEAERS ++Q+TSRSSRNIFKNSTLMVDKAE VDKDS TS CLDKKD RK TSGD
Sbjct: 301 IKPEAERSKCFSQDTSRSSRNIFKNSTLMVDKAEAVDKDSLTSHCLDKKDNPRKRTSGDN 360
Query: 361 CESNAVNLAGKKTHVLDELSCTTSSTCNTKADIPETFPPNNSQVLKRKGDIEFEMQLQMA 420
ESNAVNL GKK HVLD+LS TTSS CN+K DI ETFP NSQV KRKGDIEFEMQLQMA
Sbjct: 361 RESNAVNLVGKKLHVLDDLSSTTSSNCNSKPDISETFPLKNSQVQKRKGDIEFEMQLQMA 420
Query: 421 LSATAVETMPRNSSINYSNEPPLNFPSPKKLKRTVNEESASSSHGISTAVGSSKEGSPLY 480
LSATAVETMPRNSSIN+SNEPPLNF SPKKLKR NEESASSSHGISTAVGSSKEGSPLY
Sbjct: 421 LSATAVETMPRNSSINHSNEPPLNFTSPKKLKRIDNEESASSSHGISTAVGSSKEGSPLY 480
Query: 481 WAEVYCNAENLTGKWVHVDAVNMVVDGEHKVEDLAAACKTSLRYVVAFSGLGAKDVTRRY 540
WAEVYCNAENLTGKWVH+DAVNMVVDGEHKVEDLAAACKTSLRYVVAFSGLGAKDVTRRY
Sbjct: 481 WAEVYCNAENLTGKWVHIDAVNMVVDGEHKVEDLAAACKTSLRYVVAFSGLGAKDVTRRY 540
Query: 541 CMKWYKIETKRVNALWWENVLAPLRILEGQAVGGTGHLEKRCIDGLMEQDKLKMSDLSDN 600
CMKWYKIE KRVN LWW+NVLAPLRILE QAVGGTGHLEK CIDGL EQDKLKMSDLSDN
Sbjct: 541 CMKWYKIEAKRVNTLWWDNVLAPLRILERQAVGGTGHLEKCCIDGLREQDKLKMSDLSDN 600
Query: 601 LKQKNLLDDGNQPGKSDHNVSEGLDTDRDSSMGNQFVATRDHLEDIELETRALTEPLPTN 660
LKQKNLLDDGNQ GKSDHNVSEGLDTDRD S+GNQFVATRDHLEDIELETRALTEPLPTN
Sbjct: 601 LKQKNLLDDGNQSGKSDHNVSEGLDTDRDFSLGNQFVATRDHLEDIELETRALTEPLPTN 660
Query: 661 QQAYKNHRLYALEKWLTKYQMLHPKGPVLGFCSGHPVYPRTCVQMLKTKQKWLREGLQVK 720
QQAYKNHRLYALEKWLTKYQ+LHPKGPVLGFCSG+PVYPRTCVQ+LKTKQKWLREGLQVK
Sbjct: 661 QQAYKNHRLYALEKWLTKYQILHPKGPVLGFCSGYPVYPRTCVQVLKTKQKWLREGLQVK 720
Query: 721 SNELPVKELKRSIRKIKVLESEADDFDQGDSQGVIQLYGKWQLEPLQLPRAINGIVPK-- 780
SNELPVKELKRSI+KIKVLESEADDFDQGDSQG I LYGKWQLEPLQLP A++GIVPK
Sbjct: 721 SNELPVKELKRSIKKIKVLESEADDFDQGDSQGTIPLYGKWQLEPLQLPHAVDGIVPKAR 780
Query: 781 ----------------NERGQVDVWSEKCLPPGTVHIRLPRVFSVAKRLEIDYAPAMVAF 840
NERGQVDVWSEKCLPPGTVHIRLPRVFSVAK+LEIDYAPA+V F
Sbjct: 781 KYSSFIKNYTILSIPLNERGQVDVWSEKCLPPGTVHIRLPRVFSVAKKLEIDYAPALVGF 840
Query: 841 EFRNGRSYPIYDGIVVCSEFKDVILEAYTEEAERMEAEERRWREKQAISRWYQLLSSILT 900
EFRNGRSYPIYDGIVVCSEFKDVILE Y EEAERMEAEERR REKQAISRWYQLLSSI+T
Sbjct: 841 EFRNGRSYPIYDGIVVCSEFKDVILETYNEEAERMEAEERRQREKQAISRWYQLLSSIIT 900
Query: 901 RQRLNSRYGDSENPSQVASDVRGSHDKGNADIPSCQDDAEPFERQQDNVSDTNMDSPSFI 960
RQRLNSRYGDSENPSQV S ++G HD+GNAD+PSCQ+DAEPF+ QQDNVS+ NMDSPSFI
Sbjct: 901 RQRLNSRYGDSENPSQVVSGIQGMHDEGNADVPSCQEDAEPFKGQQDNVSNPNMDSPSFI 960
Query: 961 NQEDHRHVFLLEDQIFDEKSLVVTKRCHCGFSVQVEEL 980
NQEDH+HVFLLED+IFDEKSLVVTKRCHCGFSVQVEEL
Sbjct: 961 NQEDHKHVFLLEDRIFDEKSLVVTKRCHCGFSVQVEEL 992
BLAST of HG10009807 vs. ExPASy Swiss-Prot
Match:
Q8W489 (DNA repair protein RAD4 OS=Arabidopsis thaliana OX=3702 GN=RAD4 PE=1 SV=1)
HSP 1 Score: 736.1 bits (1899), Expect = 5.1e-211
Identity = 450/969 (46.44%), Postives = 584/969 (60.27%), Query Frame = 0
Query: 31 SQTSTDGGTLANVSRVAVGKLLSRVSGRCLSGTRQHALHPCDLVRKPKSTIGKDVNPAVD 90
S++ + LA SRVAV K+L + S R G ++ CD ++ K GK A+D
Sbjct: 3 SRSESKNCRLAQASRVAVNKVLDKSSARGSRGKKKQD-DNCDSAKRDKGVNGKG-KQALD 62
Query: 91 KKV---TLEAERCNENVTASCSVDVDVHEVNLQNYVSEVLEDLDDSDWEDGCVRTLDGT- 150
++ LE C +VD D +++DSDWED + +LD T
Sbjct: 63 ARLIDNVLEDRGCG-------NVDDD---------------EMNDSDWEDCPIPSLDSTV 122
Query: 151 ------ESHPLTIEFSEMQQTADSTRRKPIRRASAADKEIAEFVHKVHLLCLLGRGRLID 210
++ LTIEF + D+ ++K RA+A DK AE VHKVHLLCLL RGR++D
Sbjct: 123 DDNNVDDTRELTIEFDD--DVPDAKKQKNAYRATAEDKVRAELVHKVHLLCLLARGRIVD 182
Query: 211 RACNDPLIQSALLSLLPAHLLKMSPAKQLTASSLKPLVTWLHNNFRVRNQTRSEGSINSA 270
ACNDPLIQ+ALLSLLP++L K+S +++T + PL+ W+ NF V SE S ++
Sbjct: 183 SACNDPLIQAALLSLLPSYLTKVSNLEKVTVKDIAPLLRWVRENFSVSCSPSSEKSFRTS 242
Query: 271 LACALETHEGTLEEIAALTVVLFRALDLTTRFVSILDVAPIKPEAERS-NYNQETSRSSR 330
LA ALE+ +GT EE+AAL V L RAL LTTRFVSILDVA +KP A+R+ + Q ++
Sbjct: 243 LAFALESRKGTAEELAALAVALLRALKLTTRFVSILDVASLKPGADRNESSGQNRAKMKH 302
Query: 331 NIFKNSTLMVDKAEPVDK--DSPTSRCLDK----KDYLRKSTSGDKCESNAVNLAGKKTH 390
IF+ STLMV K + + +S +K K L D+ + NAVN
Sbjct: 303 GIFRTSTLMVPKQQAISSYPKKSSSHVKNKSPFEKPQLGNPLGSDQVQDNAVN------- 362
Query: 391 VLDELSCTTSSTCNTKADIPETFPPNNSQVLKRKGDIEFEMQLQMALSATAVETMPRNSS 450
S+C I S +RKGD+EFE Q+ MALSATA
Sbjct: 363 ----------SSCEAGMSI-------KSDGTRRKGDVEFERQIAMALSATA--------- 422
Query: 451 INYSNEPPLNFPSPKKLKR--TVNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLT 510
N+ + KK++ ++ S+ S ISTA GS K SPL W EVYCN EN+
Sbjct: 423 ---DNQQSSQVNNTKKVREITKISNSSSVSDQVISTAFGSKKVDSPLCWLEVYCNGENMD 482
Query: 511 GKWVHVDAVNMVVDGEHKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIETKRV 570
GKWVHVDAVN ++D E +E AAACKT LRYVVAF+ GAKDVTRRYC KW+ I +KRV
Sbjct: 483 GKWVHVDAVNGMIDAEQNIEAAAAACKTVLRYVVAFAAGGAKDVTRRYCTKWHTISSKRV 542
Query: 571 NALWWENVLAPLRILEGQAVGGTGHLEKRCIDGLMEQDKLKMSDLSDNLKQKNLLDDGNQ 630
+++WW+ VLAPL LE G H +++ +N +G
Sbjct: 543 SSVWWDMVLAPLVHLE----SGATH--------------------DEDIALRNF--NGLN 602
Query: 631 PGKSDHNVSEGLDTDRDSSMGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYAL 690
P S R SS + F R LED+EL TRALTE LPTNQQAYK+H +YA+
Sbjct: 603 PVSS-----------RASSSSSSF-GIRSALEDMELATRALTESLPTNQQAYKSHEIYAI 662
Query: 691 EKWLTKYQMLHPKGPVLGFCSGHPVYPRTCVQMLKTKQKWLREGLQVKSNELPVKELKRS 750
EKWL K Q+LHPKGPVLGFCSGHPVYPRTCVQ LKTK++WLR+GLQ+K+NE+P K LKR+
Sbjct: 663 EKWLHKNQILHPKGPVLGFCSGHPVYPRTCVQTLKTKERWLRDGLQLKANEVPSKILKRN 722
Query: 751 IRKIKVLESEADDFDQGDSQGVIQLYGKWQLEPLQLPRAINGIVPKNERGQVDVWSEKCL 810
+ KV + E D + ++LYGKWQ+EPL LP A+NGIVPKNERGQVDVWSEKCL
Sbjct: 723 SKFKKVKDFEDGDNNIKGGSSCMELYGKWQMEPLCLPPAVNGIVPKNERGQVDVWSEKCL 782
Query: 811 PPGTVHIRLPRVFSVAKRLEIDYAPAMVAFEFRNGRSYPIYDGIVVCSEFKDVILEAYTE 870
PPGTVH+R PR+F+VAKR IDYAPAMV FE+R+G + PI++GIVVC+EFKD ILEAY E
Sbjct: 783 PPGTVHLRFPRIFAVAKRFGIDYAPAMVGFEYRSGGATPIFEGIVVCTEFKDTILEAYAE 842
Query: 871 EAERMEAEERRWREKQAISRWYQLLSSILTRQRLNSRYGDSENPSQVASDVRGSHDKGNA 930
E E+ E EERR E QA SRWYQLLSSILTR+RL +RY ++ N DV + N+
Sbjct: 843 EQEKKEEEERRRNEAQAASRWYQLLSSILTRERLKNRYANNSN------DVEAKSLEVNS 865
Query: 931 D-IPSCQDDAEPFERQQDNVSDTNMDSPSFINQEDHRHVFLLEDQIFDEKSLVVTKRCHC 980
+ + ++ P +++ + + S E H HVFL E++ FDE++ V TKRC C
Sbjct: 903 ETVVKAKNVKAPEKQRVAKRGEKSRVRKSRNEDESHEHVFLDEEETFDEETSVKTKRCKC 865
BLAST of HG10009807 vs. ExPASy Swiss-Prot
Match:
P51612 (DNA repair protein complementing XP-C cells homolog OS=Mus musculus OX=10090 GN=Xpc PE=1 SV=2)
HSP 1 Score: 226.9 bits (577), Expect = 1.0e-57
Identity = 228/828 (27.54%), Postives = 338/828 (40.82%), Query Frame = 0
Query: 128 EDLDDSDWEDGCVRT---LDGTES----------HPLTIEFSEMQQTADSTRRKPI---- 187
ED + DWE+ T LD E+ + IE QQ + R + I
Sbjct: 123 EDDSEDDWEEVEELTEPVLDMGENSATSPSDMPVKAVEIEIETPQQAKERERSEKIKMEF 182
Query: 188 -----RRASAADKEIAEFVHKVHLLCLLGRGRLIDRACNDPLIQSALLSLLPAHLLKMSP 247
R +KE+ E +HKVHLLCLL G + C P + + LS++P K+ P
Sbjct: 183 ETYLRRMMKRFNKEVQENMHKVHLLCLLASGFYRNSICRQPDLLAIGLSIIPIRFTKV-P 242
Query: 248 AKQLTASSLKPLVTWLHNNFRVRN--QTRSEGSINSALACALETHEG-TLEEIAALTVVL 307
+ A L LV W F V + + + L + + EE+ + +++
Sbjct: 243 LQDRDAYYLSNLVKWFIGTFTVNADLSASEQDDLQTTLERRIAIYSARDNEELVHIFLLI 302
Query: 308 FRALDLTTRFVSILDVAPIKPEAERS-NYNQETS---------------------RSSRN 367
RAL L TR V L P+K + ++ETS +SR
Sbjct: 303 LRALQLLTRLVLSLQPIPLKSAVTKGRKSSKETSVEGPGGSSELSSNSPESHNKPTTSRR 362
Query: 368 IFKNSTLMVDKAEPVDKDSPTSRCLDKKDYLRKSTS-GDKCESNAVNLA-GKKTHVLDEL 427
I + TL + + + + + + S S G++ E +K V ++
Sbjct: 363 IKEEETLSEGRGKATARGKRGTGTAGSRQRRKPSCSEGEEAEQKVQGRPHARKRRVAAKV 422
Query: 428 SCTTSSTCNTKADIPETFPPNNSQVLKRKGDIEFEMQLQMALSA---TAVETMPRNSSIN 487
S S + + P + D E + Q SA T + + +
Sbjct: 423 SYKEESESDGAGSGSDFEPSSGEGQHSSDEDCEPGPRKQKRASAPQRTKAGSKSASKTQR 482
Query: 488 YSNEPPLNFPSPKKLKRTVNEESASSSHG------ISTAVGSSKEGSPL---YWAEVYCN 547
S P +FP E++SSS G +S+ + P W EVYC
Sbjct: 483 GSQCEPSSFP-----------EASSSSSGCKRGKKVSSGAEEMADRKPAGVDQWLEVYCE 542
Query: 548 AENLTGKWVHVDAVNMVVDGEHKVEDLAAACKTSLRYVVAFSGLG-AKDVTRRYCMKWYK 607
+ KWV VD V+ VV V A K + YVV G +DVT+RY W
Sbjct: 543 PQ---AKWVCVDCVHGVVG--QPVACYKYATK-PMTYVVGIDSDGWVRDVTQRYDPAWMT 602
Query: 608 IETK-RVNALWWENVLAPLRILEGQAVGGTGHLEKRCIDGLMEQDKLKMSDLSDNLKQKN 667
K RV+A WW L P R L
Sbjct: 603 ATRKCRVDAEWWAETLRPYRSL-------------------------------------- 662
Query: 668 LLDDGNQPGKSDHNVSEGLDTDRDSSMGNQFVATRDHLEDIELETRALTEPLPTNQQAYK 727
+ R+ ED E + + L +PLPT+ YK
Sbjct: 663 -------------------------------LTEREKKEDQEFQAKHLDQPLPTSISTYK 722
Query: 728 NHRLYALEKWLTKYQMLHPK-GPVLGFCSGHPVYPRTCVQMLKTKQKWLREGLQVKSNEL 787
NH LYAL++ L K+Q ++P+ VLG+C G VY R CV L ++ WL++ V+ E+
Sbjct: 723 NHPLYALKRHLLKFQAIYPETAAVLGYCRGEAVYSRDCVHTLHSRDTWLKQARVVRLGEV 782
Query: 788 PVKELKR-SIRKIKVLESEADDFDQGDSQGVIQLYGKWQLEPLQLPRAINGIVPKNERGQ 847
P K +K S R K SE D D + LYG WQ E Q P A++G VP+NE G
Sbjct: 783 PYKMVKGFSNRARKARLSEPQLHDHND----LGLYGHWQTEEYQPPIAVDGKVPRNEFGN 842
Query: 848 VDVWSEKCLPPGTVHIRLPRVFSVAKRLEIDYAPAMVAFEFRNGRSYPIYDGIVVCSEFK 891
V ++ +P G V + LP + VA++L ID A+ F+F G +P+ DG +VC EF+
Sbjct: 843 VYLFLPSMMPVGCVQMTLPNLNRVARKLGIDCVQAITGFDFHGGYCHPVTDGYIVCEEFR 859
BLAST of HG10009807 vs. ExPASy Swiss-Prot
Match:
Q01831 (DNA repair protein complementing XP-C cells OS=Homo sapiens OX=9606 GN=XPC PE=1 SV=4)
HSP 1 Score: 224.6 bits (571), Expect = 5.0e-57
Identity = 250/978 (25.56%), Postives = 388/978 (39.67%), Query Frame = 0
Query: 6 QSQRPKKSSGIEDAVEAIPDSGGSCSQTSTDGGTLANVSRVAV-GKLLSRVSGRCLSGTR 65
+ ++P K S + + G S S DG V++V V + L + LS
Sbjct: 38 EDEKPPKKSLLSKVSQGKRKRGCSHPGGSADGPAKKKVAKVTVKSENLKVIKDEALSDGD 97
Query: 66 QHALHPCDLVR----KPKSTIGKDVNPAVDKKVTLEAERCNENVTASCSVDVDVHEVNLQ 125
P DL + K +T+ +D N E E +EN D EV +
Sbjct: 98 DLRDFPSDLKKAHHLKRGATMNEDSN---------EEEEESEN---------DWEEV--E 157
Query: 126 NYVSEVLEDLDDSDWEDGCVRTLDGTESHPLTIEFSEMQQTADSTRRKPI-------RRA 185
VL D+ +S R+L + + IE E +T + + + + R
Sbjct: 158 ELSEPVLGDVRES---TAFSRSLLPVKPVEIEIETPEQAKTRERSEKIKLEFETYLRRAM 217
Query: 186 SAADKEIAEFVHKVHLLCLLGRGRLIDRACNDPLIQSALLSLLPAHLLKMSPAKQLTASS 245
+K + E HKVHLLCLL G + C+ P + + LS++PA ++ P + +
Sbjct: 218 KRFNKGVHEDTHKVHLLCLLANGFYRNNICSQPDLHAIGLSIIPARFTRVLP-RDVDTYY 277
Query: 246 LKPLVTWLHNNFRVRNQTRSEGSINSALACALETHEGTL-----EEIAALTVVLFRALDL 305
L LV W F V + + N L LE EE+ + +++ RAL L
Sbjct: 278 LSNLVKWFIGTFTVNAELSASEQDN--LQTTLERRFAIYSARDDEELVHIFLLILRALQL 337
Query: 306 TTRFVSILDVAPI--------KPEAERSNYNQ-ETSRSSRNIFKNSTLMVDKAEPVDKDS 365
TR V L P+ KP ER + +S +S + +N T
Sbjct: 338 LTRLVLSLQPIPLKSATAKGKKPSKERLTADPGGSSETSSQVLENHT-----------KP 397
Query: 366 PTSRCLDKKDYLRKSTSGDKCESNAVNLAGKKTHVLDELSCTTSSTCNTKADIPETFPPN 425
TS+ +++ K T + N G+K S + + + P
Sbjct: 398 KTSKGTKQEETFAKGTCRPSAKGKR-NKGGRKKRSKPSSSEEDEGPGDKQEKATQRRPHG 457
Query: 426 NSQVLKRKGDIEFEMQLQMALSATAVETMPRNSSINYSNE----PPLNFPSPKKLKRTVN 485
+ + + + E A S + E +S + PP +P +
Sbjct: 458 RERRVASRVSYKEESGSDEAGSGSDFELSSGEASDPSDEDSEPGPPKQRKAPAPQRTKAG 517
Query: 486 EESASSSH-----------GISTAVGSSKEGSPL----------------YWAEVYCNAE 545
+SAS +H S++ SSK G + W EV+C E
Sbjct: 518 SKSASRTHRGSHRKDPSLPAASSSSSSSKRGKKMCSDGEKAEKRSIAGIDQWLEVFCEQE 577
Query: 546 NLTGKWVHVDAVNMVVDGEHKVEDLAAACKTSLRYVVAFSGLG-AKDVTRRYCMKWYKIE 605
KWV VD V+ VV A T YVV G +DVT+RY W +
Sbjct: 578 E---KWVCVDCVHGVVGQPLTCYKYATKPMT---YVVGIDSDGWVRDVTQRYDPVWMTVT 637
Query: 606 TK-RVNALWWENVLAPLRILEGQAVGGTGHLEKRCIDGLMEQDKLKMSDLSDNLKQKNLL 665
K RV+A WW L P Q +
Sbjct: 638 RKCRVDAEWWAETLRPY--------------------------------------QSPFM 697
Query: 666 DDGNQPGKSDHNVSEGLDTDRDSSMGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNH 725
D R+ ED+E + + + +PLPT YKNH
Sbjct: 698 D-------------------------------REKKEDLEFQAKHMDQPLPTAIGLYKNH 757
Query: 726 RLYALEKWLTKYQMLHPK-GPVLGFCSGHPVYPRTCVQMLKTKQKWLREGLQVKSNELPV 785
LYAL++ L KY+ ++P+ +LG+C G VY R CV L ++ WL++ V+ E+P
Sbjct: 758 PLYALKRHLLKYEAIYPETAAILGYCRGEAVYSRDCVHTLHSRDTWLKKARVVRLGEVPY 817
Query: 786 KELK---RSIRKIKVLESEADDFDQGDSQGVIQLYGKWQLEPLQLPRAINGIVPKNERGQ 845
K +K RK ++ E + + + + L+G WQ E Q P A++G VP+NE G
Sbjct: 818 KMVKGFSNRARKARLAEPQLRE------ENDLGLFGYWQTEEYQPPVAVDGKVPRNEFGN 877
Query: 846 VDVWSEKCLPPGTVHIRLPRVFSVAKRLEIDYAPAMVAFEFRNGRSYPIYDGIVVCSEFK 905
V ++ +P G V + LP + VA++L+ID A+ F+F G S+P+ DG +VC EFK
Sbjct: 878 VYLFLPSMMPIGCVQLNLPNLHRVARKLDIDCVQAITGFDFHGGYSHPVTDGYIVCEEFK 896
Query: 906 DVILEAYTEEAERMEAEERRWREKQAISRWYQLLSSILTRQRLNSRYGDSENPSQVASDV 921
DV+L A+ E +E +E+ +EK+A+ W L +L R+RL RYG + +D
Sbjct: 938 DVLLTAWENEQAVIERKEKEKKEKRALGNWKLLAKGLLIRERLKRRYGPKSEAAAPHTDA 896
BLAST of HG10009807 vs. ExPASy Swiss-Prot
Match:
Q24595 (DNA repair protein complementing XP-C cells homolog OS=Drosophila melanogaster OX=7227 GN=Xpc PE=1 SV=2)
HSP 1 Score: 173.7 bits (439), Expect = 1.0e-41
Identity = 90/252 (35.71%), Postives = 142/252 (56.35%), Query Frame = 0
Query: 639 RDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLH-PKGPVLGFCSGHPVY 698
RD ED +L +PLP + +K+H LY LE+ L K+Q L+ P P LGF G VY
Sbjct: 1047 RDITEDDQLRRIHSDKPLPKSISEFKDHPLYVLERHLLKFQGLYPPDAPTLGFIRGEAVY 1106
Query: 699 PRTCVQMLKTKQKWLREGLQVKSNELPVKELKRSIRKIKVLESEADDFDQGDSQGVIQLY 758
R CV +L +++ WL+ VK E P K +K + ++ + D ++++
Sbjct: 1107 SRDCVHLLHSREIWLKSARVVKLGEQPYKVVKARPKWDRLTRTVIKD-------QPLEIF 1166
Query: 759 GKWQLEPLQLPRAINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVAKRLEIDYAPA 818
G WQ + + P A NGIVP+N G V+++ + LP TVH+RLP + + K+L ID A A
Sbjct: 1167 GYWQTQEYEPPTAENGIVPRNAYGNVELFKDCMLPKKTVHLRLPGLMRICKKLNIDCANA 1226
Query: 819 MVAFEFRNGRSYPIYDGIVVCSEFKDVILEAYTEEAERMEAEERRWREKQAISRWYQLLS 878
+V F+F G +P+YDG +VC EF++V+ A+ E+ + +E+ E + W +L+
Sbjct: 1227 VVGFDFHQGACHPMYDGFIVCEEFREVVTAAWEEDQQVQVLKEQEKYETRVYGNWKKLIK 1286
Query: 879 SILTRQRLNSRY 890
+L R+RL +Y
Sbjct: 1287 GLLIRERLKKKY 1291
BLAST of HG10009807 vs. ExPASy Swiss-Prot
Match:
Q10445 (DNA repair protein rhp41 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rhp41 PE=3 SV=1)
HSP 1 Score: 115.2 bits (287), Expect = 4.3e-24
Identity = 116/423 (27.42%), Postives = 170/423 (40.19%), Query Frame = 0
Query: 477 PLYWAEVYCNAENLTGKWVHVDAVN--MVVDGEHKVEDLAAACKTSLRYVVAFSGLG-AK 536
P++W E + A KWV VD V+ + E ++ + YV A G K
Sbjct: 302 PVFWVEAFNKAMQ---KWVCVDPFGDASVIGKYRRFEPASSDHLNQMTYVFAIEANGYVK 361
Query: 537 DVTRRYCMKWYKIETKRVNALWWENVLAPLRILEGQAVGGTGHLEKRCIDGLMEQDKLKM 596
DVTR+YC+ +YKI RV + P
Sbjct: 362 DVTRKYCLHYYKILKNRVE-------IFPF------------------------------ 421
Query: 597 SDLSDNLKQKNLLDDGNQPGKSDHN-VSEGLDTDRDSSMGNQFVATRDHLEDIELETRAL 656
GK+ N + + RD F D +ED EL
Sbjct: 422 -------------------GKAWMNRIFSKIGKPRD------FYNDMDAIEDAELLRLEQ 481
Query: 657 TEPLPTNQQAYKNHRLYALEKWLTKYQMLHPK---GPVLGFCSGHPVYPRTCVQMLKTKQ 716
+E +P N Q K+H L+ LE+ L K Q + G + VYPR V + +
Sbjct: 482 SEGIPRNIQDLKDHPLFVLERHLKKNQAIKTGKSCGRINTKNGVELVYPRKYVSNGFSAE 541
Query: 717 KWLREGLQVKSNELPVKELKRSIRKIKVLESEADDFDQGDSQGVIQLYGKWQLEPLQLPR 776
W R+G +K P+K +K + + + + EA QLY P+
Sbjct: 542 HWYRKGRIIKPGAQPLKHVKNGDKVLPLYDEEA-----------TQLY---------TPK 601
Query: 777 -AINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVAKRLEIDYAPAMVAFEFRNGRS 836
+ IVPKN G +D++ LP G H R + AK LEIDYA A+V F+F+ S
Sbjct: 602 PVVANIVPKNAYGNIDLYVPSMLPYGAYHCRKRCALAAAKFLEIDYAKAVVGFDFQRKYS 638
Query: 837 YPIYDGIVVCSEFKDVI-LEAYTEEAERMEAEERRWREKQAISRWYQLLSSILTRQRLNS 891
P +G+VV +++ I L A + E EAE R R K + W +L++ + RQR+
Sbjct: 662 KPKLEGVVVSKRYEEAIDLIAEEIDQEEKEAEARNVR-KTCLLLWKRLITGLRIRQRVFE 638
BLAST of HG10009807 vs. ExPASy TrEMBL
Match:
A0A1S3CCP3 (DNA repair protein RAD4 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103499332 PE=3 SV=1)
HSP 1 Score: 1691.8 bits (4380), Expect = 0.0e+00
Identity = 871/998 (87.27%), Postives = 910/998 (91.18%), Query Frame = 0
Query: 1 MRRRKQSQRPKKSSGIEDAVEAIPDSGGSCSQTSTDGGTLANVSRVAVGKLLSRVSGRCL 60
MR RKQSQ+PKKSSGI+DA EAIPD GGSCSQTS D TLANVSRVAV KLLSR SGRCL
Sbjct: 1 MRGRKQSQQPKKSSGIKDAGEAIPDPGGSCSQTSIDRETLANVSRVAVSKLLSRASGRCL 60
Query: 61 SGTRQHALHPCDLVRKPKSTIGKDVNPAVDKKVTLEAERCNENVTASCSVDVDVHEVNLQ 120
SG R+HAL PCDL KSTIGKDVN A+DKKVTLEAERCNENVTASCS DVDVHEVNLQ
Sbjct: 61 SGMRKHALRPCDL---SKSTIGKDVNLAMDKKVTLEAERCNENVTASCSEDVDVHEVNLQ 120
Query: 121 NYVSEVLEDLDDSDWEDGCVRTLDGTESHPLTIEFSEMQQTADSTRRKPIRRASAADKEI 180
N VSEVLEDL DSDWEDGCV+T DGTES PLTIE SE+Q+ DST+RKPIRRASAADKEI
Sbjct: 121 NSVSEVLEDLYDSDWEDGCVQTSDGTESQPLTIEISEIQEIPDSTKRKPIRRASAADKEI 180
Query: 181 AEFVHKVHLLCLLGRGRLIDRACNDPLIQSALLSLLPAHLLKMSPAKQLTASSLKPLVTW 240
EFVHKVHLLCLLGRGRLIDRACNDPLIQ+ALLSLLPAHLLK+SPAKQLTASSLKPLV W
Sbjct: 181 TEFVHKVHLLCLLGRGRLIDRACNDPLIQAALLSLLPAHLLKISPAKQLTASSLKPLVAW 240
Query: 241 LHNNFRVRNQTRSEGSINSALACALETHEGTLEEIAALTVVLFRALDLTTRFVSILDVAP 300
+HNNF VRNQTRSEGSINSALA ALETHEGT EEIAALTVVLFRALD+T RFVSILDVAP
Sbjct: 241 MHNNFHVRNQTRSEGSINSALAHALETHEGTSEEIAALTVVLFRALDITARFVSILDVAP 300
Query: 301 IKPEAERSN-YNQETSRSSRNIFKNSTLMVDKAEPVDKDSPTSRCLDKKDYLRKSTSGDK 360
IKPEAERS ++Q+TSRSSRNIFKNSTLMVDKAE VDKDS TS CLDKKD RK TSGD
Sbjct: 301 IKPEAERSKCFSQDTSRSSRNIFKNSTLMVDKAEAVDKDSLTSHCLDKKDNPRKRTSGDN 360
Query: 361 CESNAVNLAGKKTHVLDELSCTTSSTCNTKADIPETFPPNNSQVLKRKGDIEFEMQLQMA 420
ESNAVNL GKK HVLD+LS TTSS CN+K DI ETFP NSQV KRKGDIEFEMQLQMA
Sbjct: 361 RESNAVNLVGKKLHVLDDLSSTTSSNCNSKPDISETFPLKNSQVQKRKGDIEFEMQLQMA 420
Query: 421 LSATAVETMPRNSSINYSNEPPLNFPSPKKLKRTVNEESASSSHGISTAVGSSKEGSPLY 480
LSATAVETMPRNSSIN+SNEPPLNF SPKKLKR NEESASSSHGISTAVGSSKEGSPLY
Sbjct: 421 LSATAVETMPRNSSINHSNEPPLNFTSPKKLKRIDNEESASSSHGISTAVGSSKEGSPLY 480
Query: 481 WAEVYCNAENLTGKWVHVDAVNMVVDGEHKVEDLAAACKTSLRYVVAFSGLGAKDVTRRY 540
WAEVYCNAENLTGKWVH+DAVNMVVDGEHKVEDLAAACKTSLRYVVAFSGLGAKDVTRRY
Sbjct: 481 WAEVYCNAENLTGKWVHIDAVNMVVDGEHKVEDLAAACKTSLRYVVAFSGLGAKDVTRRY 540
Query: 541 CMKWYKIETKRVNALWWENVLAPLRILEGQAVGGTGHLEKRCIDGLMEQDKLKMSDLSDN 600
CMKWYKIE KRVN LWW+NVLAPLRILE QAVGGTGHLEK CIDGL EQDKLKMSDLSDN
Sbjct: 541 CMKWYKIEAKRVNTLWWDNVLAPLRILERQAVGGTGHLEKCCIDGLREQDKLKMSDLSDN 600
Query: 601 LKQKNLLDDGNQPGKSDHNVSEGLDTDRDSSMGNQFVATRDHLEDIELETRALTEPLPTN 660
LKQKNLLDDGNQ GKSDHNVSEGLDTDRD S+GNQFVATRDHLEDIELETRALTEPLPTN
Sbjct: 601 LKQKNLLDDGNQSGKSDHNVSEGLDTDRDFSLGNQFVATRDHLEDIELETRALTEPLPTN 660
Query: 661 QQAYKNHRLYALEKWLTKYQMLHPKGPVLGFCSGHPVYPRTCVQMLKTKQKWLREGLQVK 720
QQAYKNHRLYALEKWLTKYQ+LHPKGPVLGFCSG+PVYPRTCVQ+LKTKQKWLREGLQVK
Sbjct: 661 QQAYKNHRLYALEKWLTKYQILHPKGPVLGFCSGYPVYPRTCVQVLKTKQKWLREGLQVK 720
Query: 721 SNELPVKELKRSIRKIKVLESEADDFDQGDSQGVIQLYGKWQLEPLQLPRAINGIVPK-- 780
SNELPVKELKRSI+KIKVLESEADDFDQGDSQG I LYGKWQLEPLQLP A++GIVPK
Sbjct: 721 SNELPVKELKRSIKKIKVLESEADDFDQGDSQGTIPLYGKWQLEPLQLPHAVDGIVPKAR 780
Query: 781 ----------------NERGQVDVWSEKCLPPGTVHIRLPRVFSVAKRLEIDYAPAMVAF 840
NERGQVDVWSEKCLPPGTVHIRLPRVFSVAK+LEIDYAPA+V F
Sbjct: 781 KYSSFIKNYTILSIPLNERGQVDVWSEKCLPPGTVHIRLPRVFSVAKKLEIDYAPALVGF 840
Query: 841 EFRNGRSYPIYDGIVVCSEFKDVILEAYTEEAERMEAEERRWREKQAISRWYQLLSSILT 900
EFRNGRSYPIYDGIVVCSEFKDVILE Y EEAERMEAEERR REKQAISRWYQLLSSI+T
Sbjct: 841 EFRNGRSYPIYDGIVVCSEFKDVILETYNEEAERMEAEERRQREKQAISRWYQLLSSIIT 900
Query: 901 RQRLNSRYGDSENPSQVASDVRGSHDKGNADIPSCQDDAEPFERQQDNVSDTNMDSPSFI 960
RQRLNSRYGDSENPSQV S ++G HD+GNAD+PSCQ+DAEPF+ QQDNVS+ NMDSPSFI
Sbjct: 901 RQRLNSRYGDSENPSQVVSGIQGMHDEGNADVPSCQEDAEPFKGQQDNVSNPNMDSPSFI 960
Query: 961 NQEDHRHVFLLEDQIFDEKSLVVTKRCHCGFSVQVEEL 980
NQEDH+HVFLLED+IFDEKSLVVTKRCHCGFSVQVEEL
Sbjct: 961 NQEDHKHVFLLEDRIFDEKSLVVTKRCHCGFSVQVEEL 995
BLAST of HG10009807 vs. ExPASy TrEMBL
Match:
A0A1S3CCS6 (DNA repair protein RAD4 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103499332 PE=3 SV=1)
HSP 1 Score: 1689.9 bits (4375), Expect = 0.0e+00
Identity = 872/1011 (86.25%), Postives = 911/1011 (90.11%), Query Frame = 0
Query: 1 MRRRKQSQRPKKSSGIEDAVEAIPDSGGSCSQTSTDGG---------------------- 60
MR RKQSQ+PKKSSGI+DA EAIPD GGSCSQTS D G
Sbjct: 1 MRGRKQSQQPKKSSGIKDAGEAIPDPGGSCSQTSIDRGVFWSINCLFFLFFEKLFLLGLR 60
Query: 61 ---------TLANVSRVAVGKLLSRVSGRCLSGTRQHALHPCDLVRKPKSTIGKDVNPAV 120
TLANVSRVAV KLLSR SGRCLSG R+HAL PCDL KSTIGKDVN A+
Sbjct: 61 HHLCFFFLETLANVSRVAVSKLLSRASGRCLSGMRKHALRPCDL---SKSTIGKDVNLAM 120
Query: 121 DKKVTLEAERCNENVTASCSVDVDVHEVNLQNYVSEVLEDLDDSDWEDGCVRTLDGTESH 180
DKKVTLEAERCNENVTASCS DVDVHEVNLQN VSEVLEDL DSDWEDGCV+T DGTES
Sbjct: 121 DKKVTLEAERCNENVTASCSEDVDVHEVNLQNSVSEVLEDLYDSDWEDGCVQTSDGTESQ 180
Query: 181 PLTIEFSEMQQTADSTRRKPIRRASAADKEIAEFVHKVHLLCLLGRGRLIDRACNDPLIQ 240
PLTIE SE+Q+ DST+RKPIRRASAADKEI EFVHKVHLLCLLGRGRLIDRACNDPLIQ
Sbjct: 181 PLTIEISEIQEIPDSTKRKPIRRASAADKEITEFVHKVHLLCLLGRGRLIDRACNDPLIQ 240
Query: 241 SALLSLLPAHLLKMSPAKQLTASSLKPLVTWLHNNFRVRNQTRSEGSINSALACALETHE 300
+ALLSLLPAHLLK+SPAKQLTASSLKPLV W+HNNF VRNQTRSEGSINSALA ALETHE
Sbjct: 241 AALLSLLPAHLLKISPAKQLTASSLKPLVAWMHNNFHVRNQTRSEGSINSALAHALETHE 300
Query: 301 GTLEEIAALTVVLFRALDLTTRFVSILDVAPIKPEAERSN-YNQETSRSSRNIFKNSTLM 360
GT EEIAALTVVLFRALD+T RFVSILDVAPIKPEAERS ++Q+TSRSSRNIFKNSTLM
Sbjct: 301 GTSEEIAALTVVLFRALDITARFVSILDVAPIKPEAERSKCFSQDTSRSSRNIFKNSTLM 360
Query: 361 VDKAEPVDKDSPTSRCLDKKDYLRKSTSGDKCESNAVNLAGKKTHVLDELSCTTSSTCNT 420
VDKAE VDKDS TS CLDKKD RK TSGD ESNAVNL GKK HVLD+LS TTSS CN+
Sbjct: 361 VDKAEAVDKDSLTSHCLDKKDNPRKRTSGDNRESNAVNLVGKKLHVLDDLSSTTSSNCNS 420
Query: 421 KADIPETFPPNNSQVLKRKGDIEFEMQLQMALSATAVETMPRNSSINYSNEPPLNFPSPK 480
K DI ETFP NSQV KRKGDIEFEMQLQMALSATAVETMPRNSSIN+SNEPPLNF SPK
Sbjct: 421 KPDISETFPLKNSQVQKRKGDIEFEMQLQMALSATAVETMPRNSSINHSNEPPLNFTSPK 480
Query: 481 KLKRTVNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHVDAVNMVVDGEH 540
KLKR NEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVH+DAVNMVVDGEH
Sbjct: 481 KLKRIDNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHIDAVNMVVDGEH 540
Query: 541 KVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIETKRVNALWWENVLAPLRILEG 600
KVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIE KRVN LWW+NVLAPLRILE
Sbjct: 541 KVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIEAKRVNTLWWDNVLAPLRILER 600
Query: 601 QAVGGTGHLEKRCIDGLMEQDKLKMSDLSDNLKQKNLLDDGNQPGKSDHNVSEGLDTDRD 660
QAVGGTGHLEK CIDGL EQDKLKMSDLSDNLKQKNLLDDGNQ GKSDHNVSEGLDTDRD
Sbjct: 601 QAVGGTGHLEKCCIDGLREQDKLKMSDLSDNLKQKNLLDDGNQSGKSDHNVSEGLDTDRD 660
Query: 661 SSMGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPKGPVL 720
S+GNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQ+LHPKGPVL
Sbjct: 661 FSLGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQILHPKGPVL 720
Query: 721 GFCSGHPVYPRTCVQMLKTKQKWLREGLQVKSNELPVKELKRSIRKIKVLESEADDFDQG 780
GFCSG+PVYPRTCVQ+LKTKQKWLREGLQVKSNELPVKELKRSI+KIKVLESEADDFDQG
Sbjct: 721 GFCSGYPVYPRTCVQVLKTKQKWLREGLQVKSNELPVKELKRSIKKIKVLESEADDFDQG 780
Query: 781 DSQGVIQLYGKWQLEPLQLPRAINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVAK 840
DSQG I LYGKWQLEPLQLP A++GIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVAK
Sbjct: 781 DSQGTIPLYGKWQLEPLQLPHAVDGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVAK 840
Query: 841 RLEIDYAPAMVAFEFRNGRSYPIYDGIVVCSEFKDVILEAYTEEAERMEAEERRWREKQA 900
+LEIDYAPA+V FEFRNGRSYPIYDGIVVCSEFKDVILE Y EEAERMEAEERR REKQA
Sbjct: 841 KLEIDYAPALVGFEFRNGRSYPIYDGIVVCSEFKDVILETYNEEAERMEAEERRQREKQA 900
Query: 901 ISRWYQLLSSILTRQRLNSRYGDSENPSQVASDVRGSHDKGNADIPSCQDDAEPFERQQD 960
ISRWYQLLSSI+TRQRLNSRYGDSENPSQV S ++G HD+GNAD+PSCQ+DAEPF+ QQD
Sbjct: 901 ISRWYQLLSSIITRQRLNSRYGDSENPSQVVSGIQGMHDEGNADVPSCQEDAEPFKGQQD 960
Query: 961 NVSDTNMDSPSFINQEDHRHVFLLEDQIFDEKSLVVTKRCHCGFSVQVEEL 980
NVS+ NMDSPSFINQEDH+HVFLLED+IFDEKSLVVTKRCHCGFSVQVEEL
Sbjct: 961 NVSNPNMDSPSFINQEDHKHVFLLEDRIFDEKSLVVTKRCHCGFSVQVEEL 1008
BLAST of HG10009807 vs. ExPASy TrEMBL
Match:
A0A1S3CDX3 (DNA repair protein RAD4 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103499332 PE=3 SV=1)
HSP 1 Score: 1684.1 bits (4360), Expect = 0.0e+00
Identity = 869/998 (87.07%), Postives = 908/998 (90.98%), Query Frame = 0
Query: 1 MRRRKQSQRPKKSSGIEDAVEAIPDSGGSCSQTSTDGGTLANVSRVAVGKLLSRVSGRCL 60
MR RKQSQ+PKKSSGI+DA EAIPD GGSCSQTS D ANVSRVAV KLLSR SGRCL
Sbjct: 1 MRGRKQSQQPKKSSGIKDAGEAIPDPGGSCSQTSID---RANVSRVAVSKLLSRASGRCL 60
Query: 61 SGTRQHALHPCDLVRKPKSTIGKDVNPAVDKKVTLEAERCNENVTASCSVDVDVHEVNLQ 120
SG R+HAL PCDL KSTIGKDVN A+DKKVTLEAERCNENVTASCS DVDVHEVNLQ
Sbjct: 61 SGMRKHALRPCDL---SKSTIGKDVNLAMDKKVTLEAERCNENVTASCSEDVDVHEVNLQ 120
Query: 121 NYVSEVLEDLDDSDWEDGCVRTLDGTESHPLTIEFSEMQQTADSTRRKPIRRASAADKEI 180
N VSEVLEDL DSDWEDGCV+T DGTES PLTIE SE+Q+ DST+RKPIRRASAADKEI
Sbjct: 121 NSVSEVLEDLYDSDWEDGCVQTSDGTESQPLTIEISEIQEIPDSTKRKPIRRASAADKEI 180
Query: 181 AEFVHKVHLLCLLGRGRLIDRACNDPLIQSALLSLLPAHLLKMSPAKQLTASSLKPLVTW 240
EFVHKVHLLCLLGRGRLIDRACNDPLIQ+ALLSLLPAHLLK+SPAKQLTASSLKPLV W
Sbjct: 181 TEFVHKVHLLCLLGRGRLIDRACNDPLIQAALLSLLPAHLLKISPAKQLTASSLKPLVAW 240
Query: 241 LHNNFRVRNQTRSEGSINSALACALETHEGTLEEIAALTVVLFRALDLTTRFVSILDVAP 300
+HNNF VRNQTRSEGSINSALA ALETHEGT EEIAALTVVLFRALD+T RFVSILDVAP
Sbjct: 241 MHNNFHVRNQTRSEGSINSALAHALETHEGTSEEIAALTVVLFRALDITARFVSILDVAP 300
Query: 301 IKPEAERSN-YNQETSRSSRNIFKNSTLMVDKAEPVDKDSPTSRCLDKKDYLRKSTSGDK 360
IKPEAERS ++Q+TSRSSRNIFKNSTLMVDKAE VDKDS TS CLDKKD RK TSGD
Sbjct: 301 IKPEAERSKCFSQDTSRSSRNIFKNSTLMVDKAEAVDKDSLTSHCLDKKDNPRKRTSGDN 360
Query: 361 CESNAVNLAGKKTHVLDELSCTTSSTCNTKADIPETFPPNNSQVLKRKGDIEFEMQLQMA 420
ESNAVNL GKK HVLD+LS TTSS CN+K DI ETFP NSQV KRKGDIEFEMQLQMA
Sbjct: 361 RESNAVNLVGKKLHVLDDLSSTTSSNCNSKPDISETFPLKNSQVQKRKGDIEFEMQLQMA 420
Query: 421 LSATAVETMPRNSSINYSNEPPLNFPSPKKLKRTVNEESASSSHGISTAVGSSKEGSPLY 480
LSATAVETMPRNSSIN+SNEPPLNF SPKKLKR NEESASSSHGISTAVGSSKEGSPLY
Sbjct: 421 LSATAVETMPRNSSINHSNEPPLNFTSPKKLKRIDNEESASSSHGISTAVGSSKEGSPLY 480
Query: 481 WAEVYCNAENLTGKWVHVDAVNMVVDGEHKVEDLAAACKTSLRYVVAFSGLGAKDVTRRY 540
WAEVYCNAENLTGKWVH+DAVNMVVDGEHKVEDLAAACKTSLRYVVAFSGLGAKDVTRRY
Sbjct: 481 WAEVYCNAENLTGKWVHIDAVNMVVDGEHKVEDLAAACKTSLRYVVAFSGLGAKDVTRRY 540
Query: 541 CMKWYKIETKRVNALWWENVLAPLRILEGQAVGGTGHLEKRCIDGLMEQDKLKMSDLSDN 600
CMKWYKIE KRVN LWW+NVLAPLRILE QAVGGTGHLEK CIDGL EQDKLKMSDLSDN
Sbjct: 541 CMKWYKIEAKRVNTLWWDNVLAPLRILERQAVGGTGHLEKCCIDGLREQDKLKMSDLSDN 600
Query: 601 LKQKNLLDDGNQPGKSDHNVSEGLDTDRDSSMGNQFVATRDHLEDIELETRALTEPLPTN 660
LKQKNLLDDGNQ GKSDHNVSEGLDTDRD S+GNQFVATRDHLEDIELETRALTEPLPTN
Sbjct: 601 LKQKNLLDDGNQSGKSDHNVSEGLDTDRDFSLGNQFVATRDHLEDIELETRALTEPLPTN 660
Query: 661 QQAYKNHRLYALEKWLTKYQMLHPKGPVLGFCSGHPVYPRTCVQMLKTKQKWLREGLQVK 720
QQAYKNHRLYALEKWLTKYQ+LHPKGPVLGFCSG+PVYPRTCVQ+LKTKQKWLREGLQVK
Sbjct: 661 QQAYKNHRLYALEKWLTKYQILHPKGPVLGFCSGYPVYPRTCVQVLKTKQKWLREGLQVK 720
Query: 721 SNELPVKELKRSIRKIKVLESEADDFDQGDSQGVIQLYGKWQLEPLQLPRAINGIVPK-- 780
SNELPVKELKRSI+KIKVLESEADDFDQGDSQG I LYGKWQLEPLQLP A++GIVPK
Sbjct: 721 SNELPVKELKRSIKKIKVLESEADDFDQGDSQGTIPLYGKWQLEPLQLPHAVDGIVPKAR 780
Query: 781 ----------------NERGQVDVWSEKCLPPGTVHIRLPRVFSVAKRLEIDYAPAMVAF 840
NERGQVDVWSEKCLPPGTVHIRLPRVFSVAK+LEIDYAPA+V F
Sbjct: 781 KYSSFIKNYTILSIPLNERGQVDVWSEKCLPPGTVHIRLPRVFSVAKKLEIDYAPALVGF 840
Query: 841 EFRNGRSYPIYDGIVVCSEFKDVILEAYTEEAERMEAEERRWREKQAISRWYQLLSSILT 900
EFRNGRSYPIYDGIVVCSEFKDVILE Y EEAERMEAEERR REKQAISRWYQLLSSI+T
Sbjct: 841 EFRNGRSYPIYDGIVVCSEFKDVILETYNEEAERMEAEERRQREKQAISRWYQLLSSIIT 900
Query: 901 RQRLNSRYGDSENPSQVASDVRGSHDKGNADIPSCQDDAEPFERQQDNVSDTNMDSPSFI 960
RQRLNSRYGDSENPSQV S ++G HD+GNAD+PSCQ+DAEPF+ QQDNVS+ NMDSPSFI
Sbjct: 901 RQRLNSRYGDSENPSQVVSGIQGMHDEGNADVPSCQEDAEPFKGQQDNVSNPNMDSPSFI 960
Query: 961 NQEDHRHVFLLEDQIFDEKSLVVTKRCHCGFSVQVEEL 980
NQEDH+HVFLLED+IFDEKSLVVTKRCHCGFSVQVEEL
Sbjct: 961 NQEDHKHVFLLEDRIFDEKSLVVTKRCHCGFSVQVEEL 992
BLAST of HG10009807 vs. ExPASy TrEMBL
Match:
A0A1S3CC87 (DNA repair protein RAD4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499332 PE=3 SV=1)
HSP 1 Score: 1678.7 bits (4346), Expect = 0.0e+00
Identity = 872/1029 (84.74%), Postives = 911/1029 (88.53%), Query Frame = 0
Query: 1 MRRRKQSQRPKKSSGIEDAVEAIPDSGGSCSQTSTDGG---------------------- 60
MR RKQSQ+PKKSSGI+DA EAIPD GGSCSQTS D G
Sbjct: 1 MRGRKQSQQPKKSSGIKDAGEAIPDPGGSCSQTSIDRGVFWSINCLFFLFFEKLFLLGLR 60
Query: 61 ---------TLANVSRVAVGKLLSRVSGRCLSGTRQHALHPCDLVRKPKSTIGKDVNPAV 120
TLANVSRVAV KLLSR SGRCLSG R+HAL PCDL KSTIGKDVN A+
Sbjct: 61 HHLCFFFLETLANVSRVAVSKLLSRASGRCLSGMRKHALRPCDL---SKSTIGKDVNLAM 120
Query: 121 DKKVTLEAERCNENVTASCSVDVDVHEVNLQNYVSEVLEDLDDSDWEDGCVRTLDGTESH 180
DKKVTLEAERCNENVTASCS DVDVHEVNLQN VSEVLEDL DSDWEDGCV+T DGTES
Sbjct: 121 DKKVTLEAERCNENVTASCSEDVDVHEVNLQNSVSEVLEDLYDSDWEDGCVQTSDGTESQ 180
Query: 181 PLTIEFSEMQQTADSTRRKPIRRASAADKEIAEFVHKVHLLCLLGRGRLIDRACNDPLIQ 240
PLTIE SE+Q+ DST+RKPIRRASAADKEI EFVHKVHLLCLLGRGRLIDRACNDPLIQ
Sbjct: 181 PLTIEISEIQEIPDSTKRKPIRRASAADKEITEFVHKVHLLCLLGRGRLIDRACNDPLIQ 240
Query: 241 SALLSLLPAHLLKMSPAKQLTASSLKPLVTWLHNNFRVRNQTRSEGSINSALACALETHE 300
+ALLSLLPAHLLK+SPAKQLTASSLKPLV W+HNNF VRNQTRSEGSINSALA ALETHE
Sbjct: 241 AALLSLLPAHLLKISPAKQLTASSLKPLVAWMHNNFHVRNQTRSEGSINSALAHALETHE 300
Query: 301 GTLEEIAALTVVLFRALDLTTRFVSILDVAPIKPEAERSN-YNQETSRSSRNIFKNSTLM 360
GT EEIAALTVVLFRALD+T RFVSILDVAPIKPEAERS ++Q+TSRSSRNIFKNSTLM
Sbjct: 301 GTSEEIAALTVVLFRALDITARFVSILDVAPIKPEAERSKCFSQDTSRSSRNIFKNSTLM 360
Query: 361 VDKAEPVDKDSPTSRCLDKKDYLRKSTSGDKCESNAVNLAGKKTHVLDELSCTTSSTCNT 420
VDKAE VDKDS TS CLDKKD RK TSGD ESNAVNL GKK HVLD+LS TTSS CN+
Sbjct: 361 VDKAEAVDKDSLTSHCLDKKDNPRKRTSGDNRESNAVNLVGKKLHVLDDLSSTTSSNCNS 420
Query: 421 KADIPETFPPNNSQVLKRKGDIEFEMQLQMALSATAVETMPRNSSINYSNEPPLNFPSPK 480
K DI ETFP NSQV KRKGDIEFEMQLQMALSATAVETMPRNSSIN+SNEPPLNF SPK
Sbjct: 421 KPDISETFPLKNSQVQKRKGDIEFEMQLQMALSATAVETMPRNSSINHSNEPPLNFTSPK 480
Query: 481 KLKRTVNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHVDAVNMVVDGEH 540
KLKR NEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVH+DAVNMVVDGEH
Sbjct: 481 KLKRIDNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHIDAVNMVVDGEH 540
Query: 541 KVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIETKRVNALWWENVLAPLRILEG 600
KVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIE KRVN LWW+NVLAPLRILE
Sbjct: 541 KVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIEAKRVNTLWWDNVLAPLRILER 600
Query: 601 QAVGGTGHLEKRCIDGLMEQDKLKMSDLSDNLKQKNLLDDGNQPGKSDHNVSEGLDTDRD 660
QAVGGTGHLEK CIDGL EQDKLKMSDLSDNLKQKNLLDDGNQ GKSDHNVSEGLDTDRD
Sbjct: 601 QAVGGTGHLEKCCIDGLREQDKLKMSDLSDNLKQKNLLDDGNQSGKSDHNVSEGLDTDRD 660
Query: 661 SSMGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPKGPVL 720
S+GNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQ+LHPKGPVL
Sbjct: 661 FSLGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQILHPKGPVL 720
Query: 721 GFCSGHPVYPRTCVQMLKTKQKWLREGLQVKSNELPVKELKRSIRKIKVLESEADDFDQG 780
GFCSG+PVYPRTCVQ+LKTKQKWLREGLQVKSNELPVKELKRSI+KIKVLESEADDFDQG
Sbjct: 721 GFCSGYPVYPRTCVQVLKTKQKWLREGLQVKSNELPVKELKRSIKKIKVLESEADDFDQG 780
Query: 781 DSQGVIQLYGKWQLEPLQLPRAINGIVPK------------------NERGQVDVWSEKC 840
DSQG I LYGKWQLEPLQLP A++GIVPK NERGQVDVWSEKC
Sbjct: 781 DSQGTIPLYGKWQLEPLQLPHAVDGIVPKARKYSSFIKNYTILSIPLNERGQVDVWSEKC 840
Query: 841 LPPGTVHIRLPRVFSVAKRLEIDYAPAMVAFEFRNGRSYPIYDGIVVCSEFKDVILEAYT 900
LPPGTVHIRLPRVFSVAK+LEIDYAPA+V FEFRNGRSYPIYDGIVVCSEFKDVILE Y
Sbjct: 841 LPPGTVHIRLPRVFSVAKKLEIDYAPALVGFEFRNGRSYPIYDGIVVCSEFKDVILETYN 900
Query: 901 EEAERMEAEERRWREKQAISRWYQLLSSILTRQRLNSRYGDSENPSQVASDVRGSHDKGN 960
EEAERMEAEERR REKQAISRWYQLLSSI+TRQRLNSRYGDSENPSQV S ++G HD+GN
Sbjct: 901 EEAERMEAEERRQREKQAISRWYQLLSSIITRQRLNSRYGDSENPSQVVSGIQGMHDEGN 960
Query: 961 ADIPSCQDDAEPFERQQDNVSDTNMDSPSFINQEDHRHVFLLEDQIFDEKSLVVTKRCHC 980
AD+PSCQ+DAEPF+ QQDNVS+ NMDSPSFINQEDH+HVFLLED+IFDEKSLVVTKRCHC
Sbjct: 961 ADVPSCQEDAEPFKGQQDNVSNPNMDSPSFINQEDHKHVFLLEDRIFDEKSLVVTKRCHC 1020
BLAST of HG10009807 vs. ExPASy TrEMBL
Match:
A0A5A7V3W6 (DNA repair protein RAD4 isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G00430 PE=3 SV=1)
HSP 1 Score: 1670.6 bits (4325), Expect = 0.0e+00
Identity = 860/998 (86.17%), Postives = 899/998 (90.08%), Query Frame = 0
Query: 14 SGIEDAVEAIPDSGGSCSQTSTDGG-------------------------------TLAN 73
+GI+DA EAIPD GGSCSQTS D G TLAN
Sbjct: 10 NGIKDAGEAIPDPGGSCSQTSIDRGVFWSINCLFFLFFEKLFLLGLRHHLCFFFLETLAN 69
Query: 74 VSRVAVGKLLSRVSGRCLSGTRQHALHPCDLVRKPKSTIGKDVNPAVDKKVTLEAERCNE 133
VSRVAV KLLSR SGRCLSG R+HAL PCDL KSTIGKDVN A+DKKVTLEAERCNE
Sbjct: 70 VSRVAVSKLLSRASGRCLSGMRKHALRPCDL---SKSTIGKDVNLAMDKKVTLEAERCNE 129
Query: 134 NVTASCSVDVDVHEVNLQNYVSEVLEDLDDSDWEDGCVRTLDGTESHPLTIEFSEMQQTA 193
NVTASCS DVDVHEVNLQN VSEVLEDL DSDWEDGCV+T DGTES PLTIE SE+Q+
Sbjct: 130 NVTASCSEDVDVHEVNLQNSVSEVLEDLYDSDWEDGCVQTSDGTESQPLTIEISEIQEIP 189
Query: 194 DSTRRKPIRRASAADKEIAEFVHKVHLLCLLGRGRLIDRACNDPLIQSALLSLLPAHLLK 253
DST+RKPIRRASAADKEI EFVHKVHLLCLLGRGRLIDRACNDPLIQ+ALLSLLPAHLLK
Sbjct: 190 DSTKRKPIRRASAADKEITEFVHKVHLLCLLGRGRLIDRACNDPLIQAALLSLLPAHLLK 249
Query: 254 MSPAKQLTASSLKPLVTWLHNNFRVRNQTRSEGSINSALACALETHEGTLEEIAALTVVL 313
+SPAKQLTASSLKPLV W+HNNF VRNQTRSEGSINSALA ALETHEGT EEIAALTVVL
Sbjct: 250 ISPAKQLTASSLKPLVAWMHNNFHVRNQTRSEGSINSALAHALETHEGTSEEIAALTVVL 309
Query: 314 FRALDLTTRFVSILDVAPIKPEAERSN-YNQETSRSSRNIFKNSTLMVDKAEPVDKDSPT 373
FRALD+T RFVSILDVAPIKPEAERS ++Q+TSRSSRNIFKNSTLMVDKAE VDKDS T
Sbjct: 310 FRALDITARFVSILDVAPIKPEAERSKCFSQDTSRSSRNIFKNSTLMVDKAEAVDKDSLT 369
Query: 374 SRCLDKKDYLRKSTSGDKCESNAVNLAGKKTHVLDELSCTTSSTCNTKADIPETFPPNNS 433
S CLDKKD RK TSGD ESNAVNL GKK HVLD+LS TTSS CN+K DI ETFP NS
Sbjct: 370 SHCLDKKDNPRKRTSGDNRESNAVNLVGKKLHVLDDLSSTTSSNCNSKPDISETFPLKNS 429
Query: 434 QVLKRKGDIEFEMQLQMALSATAVETMPRNSSINYSNEPPLNFPSPKKLKRTVNEESASS 493
QV KRKGDIEFEMQLQMALSATAVETMPRNSSIN+SNEPPLNF SPKKLKR NEESASS
Sbjct: 430 QVQKRKGDIEFEMQLQMALSATAVETMPRNSSINHSNEPPLNFTSPKKLKRIDNEESASS 489
Query: 494 SHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHVDAVNMVVDGEHKVEDLAAACKTSL 553
SHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVH+DAVNMVVDGEHKVEDLAAACKTSL
Sbjct: 490 SHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHIDAVNMVVDGEHKVEDLAAACKTSL 549
Query: 554 RYVVAFSGLGAKDVTRRYCMKWYKIETKRVNALWWENVLAPLRILEGQAVGGTGHLEKRC 613
RYVVAFSGLGAKDVTRRYCMKWYKIE KRVN LWW+NVLAPLRILE QAVGGTGHLEK C
Sbjct: 550 RYVVAFSGLGAKDVTRRYCMKWYKIEAKRVNTLWWDNVLAPLRILERQAVGGTGHLEKCC 609
Query: 614 IDGLMEQDKLKMSDLSDNLKQKNLLDDGNQPGKSDHNVSEGLDTDRDSSMGNQFVATRDH 673
IDGL EQDKLKMSDLSDNLKQKNLLDDGNQ GKSDHNVSEGLDTDRD S+GNQFVATRDH
Sbjct: 610 IDGLREQDKLKMSDLSDNLKQKNLLDDGNQSGKSDHNVSEGLDTDRDFSLGNQFVATRDH 669
Query: 674 LEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQMLHPKGPVLGFCSGHPVYPRTC 733
LEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQ+LHPKGPVLGFCSG+PVYPRTC
Sbjct: 670 LEDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQILHPKGPVLGFCSGYPVYPRTC 729
Query: 734 VQMLKTKQKWLREGLQVKSNELPVKELKRSIRKIKVLESEADDFDQGDSQGVIQLYGKWQ 793
VQ+LKTKQKWLREGLQVKSNELPVKELKRSI+KIKVLESEADDFDQGDSQG I LYGKWQ
Sbjct: 730 VQVLKTKQKWLREGLQVKSNELPVKELKRSIKKIKVLESEADDFDQGDSQGTIPLYGKWQ 789
Query: 794 LEPLQLPRAINGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVAKRLEIDYAPAMVAF 853
LEPLQLP A++GIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVAK+LEIDYAPA+V F
Sbjct: 790 LEPLQLPHAVDGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVAKKLEIDYAPALVGF 849
Query: 854 EFRNGRSYPIYDGIVVCSEFKDVILEAYTEEAERMEAEERRWREKQAISRWYQLLSSILT 913
EFRNGRSYPIYDGIVVCSEFKDVILE Y EEAERMEAEERR REKQAISRWYQLLSSI+T
Sbjct: 850 EFRNGRSYPIYDGIVVCSEFKDVILETYNEEAERMEAEERRQREKQAISRWYQLLSSIIT 909
Query: 914 RQRLNSRYGDSENPSQVASDVRGSHDKGNADIPSCQDDAEPFERQQDNVSDTNMDSPSFI 973
RQRLNSRYGDSENPSQV S ++G HD+GNAD+PSCQ+DAEPF+ QQDNVS+ NMDSPSFI
Sbjct: 910 RQRLNSRYGDSENPSQVVSGIQGMHDEGNADVPSCQEDAEPFKGQQDNVSNPNMDSPSFI 969
Query: 974 NQEDHRHVFLLEDQIFDEKSLVVTKRCHCGFSVQVEEL 980
NQEDH+HVFLLED+IFDEKSLVVTKRCHCGFSVQVEEL
Sbjct: 970 NQEDHKHVFLLEDRIFDEKSLVVTKRCHCGFSVQVEEL 1004
BLAST of HG10009807 vs. TAIR 10
Match:
AT5G16630.1 (DNA repair protein Rad4 family )
HSP 1 Score: 736.1 bits (1899), Expect = 3.7e-212
Identity = 450/969 (46.44%), Postives = 584/969 (60.27%), Query Frame = 0
Query: 31 SQTSTDGGTLANVSRVAVGKLLSRVSGRCLSGTRQHALHPCDLVRKPKSTIGKDVNPAVD 90
S++ + LA SRVAV K+L + S R G ++ CD ++ K GK A+D
Sbjct: 3 SRSESKNCRLAQASRVAVNKVLDKSSARGSRGKKKQD-DNCDSAKRDKGVNGKG-KQALD 62
Query: 91 KKV---TLEAERCNENVTASCSVDVDVHEVNLQNYVSEVLEDLDDSDWEDGCVRTLDGT- 150
++ LE C +VD D +++DSDWED + +LD T
Sbjct: 63 ARLIDNVLEDRGCG-------NVDDD---------------EMNDSDWEDCPIPSLDSTV 122
Query: 151 ------ESHPLTIEFSEMQQTADSTRRKPIRRASAADKEIAEFVHKVHLLCLLGRGRLID 210
++ LTIEF + D+ ++K RA+A DK AE VHKVHLLCLL RGR++D
Sbjct: 123 DDNNVDDTRELTIEFDD--DVPDAKKQKNAYRATAEDKVRAELVHKVHLLCLLARGRIVD 182
Query: 211 RACNDPLIQSALLSLLPAHLLKMSPAKQLTASSLKPLVTWLHNNFRVRNQTRSEGSINSA 270
ACNDPLIQ+ALLSLLP++L K+S +++T + PL+ W+ NF V SE S ++
Sbjct: 183 SACNDPLIQAALLSLLPSYLTKVSNLEKVTVKDIAPLLRWVRENFSVSCSPSSEKSFRTS 242
Query: 271 LACALETHEGTLEEIAALTVVLFRALDLTTRFVSILDVAPIKPEAERS-NYNQETSRSSR 330
LA ALE+ +GT EE+AAL V L RAL LTTRFVSILDVA +KP A+R+ + Q ++
Sbjct: 243 LAFALESRKGTAEELAALAVALLRALKLTTRFVSILDVASLKPGADRNESSGQNRAKMKH 302
Query: 331 NIFKNSTLMVDKAEPVDK--DSPTSRCLDK----KDYLRKSTSGDKCESNAVNLAGKKTH 390
IF+ STLMV K + + +S +K K L D+ + NAVN
Sbjct: 303 GIFRTSTLMVPKQQAISSYPKKSSSHVKNKSPFEKPQLGNPLGSDQVQDNAVN------- 362
Query: 391 VLDELSCTTSSTCNTKADIPETFPPNNSQVLKRKGDIEFEMQLQMALSATAVETMPRNSS 450
S+C I S +RKGD+EFE Q+ MALSATA
Sbjct: 363 ----------SSCEAGMSI-------KSDGTRRKGDVEFERQIAMALSATA--------- 422
Query: 451 INYSNEPPLNFPSPKKLKR--TVNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLT 510
N+ + KK++ ++ S+ S ISTA GS K SPL W EVYCN EN+
Sbjct: 423 ---DNQQSSQVNNTKKVREITKISNSSSVSDQVISTAFGSKKVDSPLCWLEVYCNGENMD 482
Query: 511 GKWVHVDAVNMVVDGEHKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIETKRV 570
GKWVHVDAVN ++D E +E AAACKT LRYVVAF+ GAKDVTRRYC KW+ I +KRV
Sbjct: 483 GKWVHVDAVNGMIDAEQNIEAAAAACKTVLRYVVAFAAGGAKDVTRRYCTKWHTISSKRV 542
Query: 571 NALWWENVLAPLRILEGQAVGGTGHLEKRCIDGLMEQDKLKMSDLSDNLKQKNLLDDGNQ 630
+++WW+ VLAPL LE G H +++ +N +G
Sbjct: 543 SSVWWDMVLAPLVHLE----SGATH--------------------DEDIALRNF--NGLN 602
Query: 631 PGKSDHNVSEGLDTDRDSSMGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYAL 690
P S R SS + F R LED+EL TRALTE LPTNQQAYK+H +YA+
Sbjct: 603 PVSS-----------RASSSSSSF-GIRSALEDMELATRALTESLPTNQQAYKSHEIYAI 662
Query: 691 EKWLTKYQMLHPKGPVLGFCSGHPVYPRTCVQMLKTKQKWLREGLQVKSNELPVKELKRS 750
EKWL K Q+LHPKGPVLGFCSGHPVYPRTCVQ LKTK++WLR+GLQ+K+NE+P K LKR+
Sbjct: 663 EKWLHKNQILHPKGPVLGFCSGHPVYPRTCVQTLKTKERWLRDGLQLKANEVPSKILKRN 722
Query: 751 IRKIKVLESEADDFDQGDSQGVIQLYGKWQLEPLQLPRAINGIVPKNERGQVDVWSEKCL 810
+ KV + E D + ++LYGKWQ+EPL LP A+NGIVPKNERGQVDVWSEKCL
Sbjct: 723 SKFKKVKDFEDGDNNIKGGSSCMELYGKWQMEPLCLPPAVNGIVPKNERGQVDVWSEKCL 782
Query: 811 PPGTVHIRLPRVFSVAKRLEIDYAPAMVAFEFRNGRSYPIYDGIVVCSEFKDVILEAYTE 870
PPGTVH+R PR+F+VAKR IDYAPAMV FE+R+G + PI++GIVVC+EFKD ILEAY E
Sbjct: 783 PPGTVHLRFPRIFAVAKRFGIDYAPAMVGFEYRSGGATPIFEGIVVCTEFKDTILEAYAE 842
Query: 871 EAERMEAEERRWREKQAISRWYQLLSSILTRQRLNSRYGDSENPSQVASDVRGSHDKGNA 930
E E+ E EERR E QA SRWYQLLSSILTR+RL +RY ++ N DV + N+
Sbjct: 843 EQEKKEEEERRRNEAQAASRWYQLLSSILTRERLKNRYANNSN------DVEAKSLEVNS 865
Query: 931 D-IPSCQDDAEPFERQQDNVSDTNMDSPSFINQEDHRHVFLLEDQIFDEKSLVVTKRCHC 980
+ + ++ P +++ + + S E H HVFL E++ FDE++ V TKRC C
Sbjct: 903 ETVVKAKNVKAPEKQRVAKRGEKSRVRKSRNEDESHEHVFLDEEETFDEETSVKTKRCKC 865
BLAST of HG10009807 vs. TAIR 10
Match:
AT5G16630.2 (DNA repair protein Rad4 family )
HSP 1 Score: 736.1 bits (1899), Expect = 3.7e-212
Identity = 450/969 (46.44%), Postives = 584/969 (60.27%), Query Frame = 0
Query: 31 SQTSTDGGTLANVSRVAVGKLLSRVSGRCLSGTRQHALHPCDLVRKPKSTIGKDVNPAVD 90
S++ + LA SRVAV K+L + S R G ++ CD ++ K GK A+D
Sbjct: 3 SRSESKNCRLAQASRVAVNKVLDKSSARGSRGKKKQD-DNCDSAKRDKGVNGKG-KQALD 62
Query: 91 KKV---TLEAERCNENVTASCSVDVDVHEVNLQNYVSEVLEDLDDSDWEDGCVRTLDGT- 150
++ LE C +VD D +++DSDWED + +LD T
Sbjct: 63 ARLIDNVLEDRGCG-------NVDDD---------------EMNDSDWEDCPIPSLDSTV 122
Query: 151 ------ESHPLTIEFSEMQQTADSTRRKPIRRASAADKEIAEFVHKVHLLCLLGRGRLID 210
++ LTIEF + D+ ++K RA+A DK AE VHKVHLLCLL RGR++D
Sbjct: 123 DDNNVDDTRELTIEFDD--DVPDAKKQKNAYRATAEDKVRAELVHKVHLLCLLARGRIVD 182
Query: 211 RACNDPLIQSALLSLLPAHLLKMSPAKQLTASSLKPLVTWLHNNFRVRNQTRSEGSINSA 270
ACNDPLIQ+ALLSLLP++L K+S +++T + PL+ W+ NF V SE S ++
Sbjct: 183 SACNDPLIQAALLSLLPSYLTKVSNLEKVTVKDIAPLLRWVRENFSVSCSPSSEKSFRTS 242
Query: 271 LACALETHEGTLEEIAALTVVLFRALDLTTRFVSILDVAPIKPEAERS-NYNQETSRSSR 330
LA ALE+ +GT EE+AAL V L RAL LTTRFVSILDVA +KP A+R+ + Q ++
Sbjct: 243 LAFALESRKGTAEELAALAVALLRALKLTTRFVSILDVASLKPGADRNESSGQNRAKMKH 302
Query: 331 NIFKNSTLMVDKAEPVDK--DSPTSRCLDK----KDYLRKSTSGDKCESNAVNLAGKKTH 390
IF+ STLMV K + + +S +K K L D+ + NAVN
Sbjct: 303 GIFRTSTLMVPKQQAISSYPKKSSSHVKNKSPFEKPQLGNPLGSDQVQDNAVN------- 362
Query: 391 VLDELSCTTSSTCNTKADIPETFPPNNSQVLKRKGDIEFEMQLQMALSATAVETMPRNSS 450
S+C I S +RKGD+EFE Q+ MALSATA
Sbjct: 363 ----------SSCEAGMSI-------KSDGTRRKGDVEFERQIAMALSATA--------- 422
Query: 451 INYSNEPPLNFPSPKKLKR--TVNEESASSSHGISTAVGSSKEGSPLYWAEVYCNAENLT 510
N+ + KK++ ++ S+ S ISTA GS K SPL W EVYCN EN+
Sbjct: 423 ---DNQQSSQVNNTKKVREITKISNSSSVSDQVISTAFGSKKVDSPLCWLEVYCNGENMD 482
Query: 511 GKWVHVDAVNMVVDGEHKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIETKRV 570
GKWVHVDAVN ++D E +E AAACKT LRYVVAF+ GAKDVTRRYC KW+ I +KRV
Sbjct: 483 GKWVHVDAVNGMIDAEQNIEAAAAACKTVLRYVVAFAAGGAKDVTRRYCTKWHTISSKRV 542
Query: 571 NALWWENVLAPLRILEGQAVGGTGHLEKRCIDGLMEQDKLKMSDLSDNLKQKNLLDDGNQ 630
+++WW+ VLAPL LE G H +++ +N +G
Sbjct: 543 SSVWWDMVLAPLVHLE----SGATH--------------------DEDIALRNF--NGLN 602
Query: 631 PGKSDHNVSEGLDTDRDSSMGNQFVATRDHLEDIELETRALTEPLPTNQQAYKNHRLYAL 690
P S R SS + F R LED+EL TRALTE LPTNQQAYK+H +YA+
Sbjct: 603 PVSS-----------RASSSSSSF-GIRSALEDMELATRALTESLPTNQQAYKSHEIYAI 662
Query: 691 EKWLTKYQMLHPKGPVLGFCSGHPVYPRTCVQMLKTKQKWLREGLQVKSNELPVKELKRS 750
EKWL K Q+LHPKGPVLGFCSGHPVYPRTCVQ LKTK++WLR+GLQ+K+NE+P K LKR+
Sbjct: 663 EKWLHKNQILHPKGPVLGFCSGHPVYPRTCVQTLKTKERWLRDGLQLKANEVPSKILKRN 722
Query: 751 IRKIKVLESEADDFDQGDSQGVIQLYGKWQLEPLQLPRAINGIVPKNERGQVDVWSEKCL 810
+ KV + E D + ++LYGKWQ+EPL LP A+NGIVPKNERGQVDVWSEKCL
Sbjct: 723 SKFKKVKDFEDGDNNIKGGSSCMELYGKWQMEPLCLPPAVNGIVPKNERGQVDVWSEKCL 782
Query: 811 PPGTVHIRLPRVFSVAKRLEIDYAPAMVAFEFRNGRSYPIYDGIVVCSEFKDVILEAYTE 870
PPGTVH+R PR+F+VAKR IDYAPAMV FE+R+G + PI++GIVVC+EFKD ILEAY E
Sbjct: 783 PPGTVHLRFPRIFAVAKRFGIDYAPAMVGFEYRSGGATPIFEGIVVCTEFKDTILEAYAE 842
Query: 871 EAERMEAEERRWREKQAISRWYQLLSSILTRQRLNSRYGDSENPSQVASDVRGSHDKGNA 930
E E+ E EERR E QA SRWYQLLSSILTR+RL +RY ++ N DV + N+
Sbjct: 843 EQEKKEEEERRRNEAQAASRWYQLLSSILTRERLKNRYANNSN------DVEAKSLEVNS 865
Query: 931 D-IPSCQDDAEPFERQQDNVSDTNMDSPSFINQEDHRHVFLLEDQIFDEKSLVVTKRCHC 980
+ + ++ P +++ + + S E H HVFL E++ FDE++ V TKRC C
Sbjct: 903 ETVVKAKNVKAPEKQRVAKRGEKSRVRKSRNEDESHEHVFLDEEETFDEETSVKTKRCKC 865
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q8W489 | 5.1e-211 | 46.44 | DNA repair protein RAD4 OS=Arabidopsis thaliana OX=3702 GN=RAD4 PE=1 SV=1 | [more] |
P51612 | 1.0e-57 | 27.54 | DNA repair protein complementing XP-C cells homolog OS=Mus musculus OX=10090 GN=... | [more] |
Q01831 | 5.0e-57 | 25.56 | DNA repair protein complementing XP-C cells OS=Homo sapiens OX=9606 GN=XPC PE=1 ... | [more] |
Q24595 | 1.0e-41 | 35.71 | DNA repair protein complementing XP-C cells homolog OS=Drosophila melanogaster O... | [more] |
Q10445 | 4.3e-24 | 27.42 | DNA repair protein rhp41 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) ... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3CCP3 | 0.0e+00 | 87.27 | DNA repair protein RAD4 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103499332 PE=3 ... | [more] |
A0A1S3CCS6 | 0.0e+00 | 86.25 | DNA repair protein RAD4 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103499332 PE=3 ... | [more] |
A0A1S3CDX3 | 0.0e+00 | 87.07 | DNA repair protein RAD4 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103499332 PE=3 ... | [more] |
A0A1S3CC87 | 0.0e+00 | 84.74 | DNA repair protein RAD4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499332 PE=3 ... | [more] |
A0A5A7V3W6 | 0.0e+00 | 86.17 | DNA repair protein RAD4 isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... | [more] |