HG10009806 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10009806
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ADP-ribosylation factor-like protein 8c
Location	Chr06: 10882285 .. 10883885 (+)
RNA-Seq Expression	HG10009806
Synteny	HG10009806

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCTTTCACTTGTAGGCCTCCAGAATGCTGGGAAGACATCTCTTGTCAATTCTATTGCTGTAAGAAAATGCAAATTTTCACATCTGTTTCTTTGTGTATGGGAATGGCCTTCTTGTTCCCTGATGGTTTTCAAATTTTACAGACAGGGGGCTACAGTGAGGATATGATTCCAACTGTGAGTATGTTTTTCTTTCAAGTTCGCTGTTTACGCTCATGCAACTGAATGTATCTTATAATCTTCACTTCATATTCTGATAACCAGGTCGGGTTTAACATGCGGAAAGTTACCAAGGGCAATGTAACAATTAAACTTTGGGACCTTGGAGGGCAGAGGAGATTCCGTACAATGTGGGAGAGATATTGCCGTGGCGTGACTGCAATTGTGTAAATATCCCAAGTCTCTAATCCTTTCTCCTCGTTCCATTTTAGCTATATTTGTTACTTTAGCTTACTATATGGCTGATTATTTATCTTTATTTAAATACCTGAACTCGTCAAAATTTAAACACCCAGCAAACAAATGACTGCATTTAGATATAACATCCTTTTATCCTATTAGCATTATCTGCACTTACAAAATAGTACAATCTGATCATTTGCATTCAAGAAAATCATTTTCTTTTCCAGTTTTGAGAGATTCCAAGTTACTTTTTTTTCCTGCCCTTTCCTGTATTCATTGAATCTGATCATTTTCTTGTATTGCTATGTTGAAGTTTTCTTTAGAGCTTTGCAATGATAATGATAATAACATTCTAGAACCATATGAATTGTAGTTATATGACATCCCTATTGTTAAAATTGTTAACTAATTGGTTGGTGACTTGACATACCTATTTGTTAAATATTAACTGATCTGACTCCGACAAATGGCTAGAGTTGACAACTTGATAAAATAGGGTGCCATGGTCTATAAAAGGGATTTCGCTTCAAAAAGAGGATATAGTGTACGTGGGATTTTATTTGTCTAAGTTATTTGTCAGCCTTCTGGTATTAGATCAAGTAACATCTCTCTCATAAGCATATCACATCATCATTAAAGTCGATAGTGTTAACGACAATACAATATAGAATCGCAATCAAAATTCAGTTACATAATTGATGTTTTAAGTTTAAAGACCAAACAGACAACCATCAAAGTTGAATTCTAAATCTGGATATTAACATTTCCTTTTTGGTTTCTTTGTTCTCTACCTTTTGTCCTGATATGTATGATGGGTGGAAGGTCAGGTATGTAGTTGATTCTGCTGATAGAGACAGTGTTCCCATATCAAAAAGTGAACTCCATGAGCTCTTAACAAAGCCTTCTTTAAGTGGAATTCCTTTGCTTGTGCTGGGCAACAAAATTGACAAATCAGAGGCACTTTCCAAGCAGTCACTGGTCGATTTGTTGTGAGTCCTGGATATTATATCAATGACGTATTCTGTCCATTCATATTGAAATATTCTTTTGATGATAATCTTTTCGGTTTGGTGCTGCAGAGAACTTGAAACGATTCGTGACAGGGAGGTGTGCTGCTACATGATCTCTTGCAAAGATTCGATAAACATCGATGTGGTGATCGATTGGCTAATCAAACACTCAAAAACAGCAGGATGA

mRNA sequence

ATGGAGCTTTCACTTGTAGGCCTCCAGAATGCTGGGAAGACATCTCTTGTCAATTCTATTGCTACAGGGGGCTACAGTGAGGATATGATTCCAACTGTCGGGTTTAACATGCGGAAAGTTACCAAGGGCAATGTAACAATTAAACTTTGGGACCTTGGAGGGCAGAGGAGATTCCGTACAATGTATGTAGTTGATTCTGCTGATAGAGACAGTGTTCCCATATCAAAAAGTGAACTCCATGAGCTCTTAACAAAGCCTTCTTTAAGTGGAATTCCTTTGCTTGTGCTGGGCAACAAAATTGACAAATCAGAGGCACTTTCCAAGCAGTCACTGGTCGATTTGTTAGAACTTGAAACGATTCGTGACAGGGAGGTGTGCTGCTACATGATCTCTTGCAAAGATTCGATAAACATCGATGTGGTGATCGATTGGCTAATCAAACACTCAAAAACAGCAGGATGA

Coding sequence (CDS)

ATGGAGCTTTCACTTGTAGGCCTCCAGAATGCTGGGAAGACATCTCTTGTCAATTCTATTGCTACAGGGGGCTACAGTGAGGATATGATTCCAACTGTCGGGTTTAACATGCGGAAAGTTACCAAGGGCAATGTAACAATTAAACTTTGGGACCTTGGAGGGCAGAGGAGATTCCGTACAATGTATGTAGTTGATTCTGCTGATAGAGACAGTGTTCCCATATCAAAAAGTGAACTCCATGAGCTCTTAACAAAGCCTTCTTTAAGTGGAATTCCTTTGCTTGTGCTGGGCAACAAAATTGACAAATCAGAGGCACTTTCCAAGCAGTCACTGGTCGATTTGTTAGAACTTGAAACGATTCGTGACAGGGAGGTGTGCTGCTACATGATCTCTTGCAAAGATTCGATAAACATCGATGTGGTGATCGATTGGCTAATCAAACACTCAAAAACAGCAGGATGA

Protein sequence

MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMYVVDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSKQSLVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKTAG

Homology

[Close]

BLAST of HG10009806 vs. NCBI nr
Match: XP_004140300.1 (ADP-ribosylation factor-like protein 8c [Cucumis sativus] >XP_038876072.1 ADP-ribosylation factor-like protein 8c [Benincasa hispida] >XP_038876073.1 ADP-ribosylation factor-like protein 8c [Benincasa hispida] >XP_038876074.1 ADP-ribosylation factor-like protein 8c [Benincasa hispida] >KGN51060.1 hypothetical protein Csa_008272 [Cucumis sativus])

HSP 1 Score: 293.9 bits (751), Expect = 8.0e-76
Identity = 153/165 (92.73%), Postives = 153/165 (92.73%), Query Frame = 0


Query: 1   MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT 60
           MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT
Sbjct: 20  MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT 79

Query: 61  M------------YVVDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSK 120
           M            YVVDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSK
Sbjct: 80  MWERYCRGVTAIVYVVDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSK 139

Query: 121 QSLVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKTAG 154
           QSLVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKTAG
Sbjct: 140 QSLVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKTAG 184

[Close]

BLAST of HG10009806 vs. NCBI nr
Match: XP_008460532.1 (PREDICTED: ADP-ribosylation factor-like protein 8A [Cucumis melo])

HSP 1 Score: 293.5 bits (750), Expect = 1.1e-75
Identity = 152/165 (92.12%), Postives = 153/165 (92.73%), Query Frame = 0


Query: 1   MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT 60
           MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT
Sbjct: 20  MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT 79

Query: 61  M------------YVVDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSK 120
           M            Y+VDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSK
Sbjct: 80  MWERYCRGVTAIVYIVDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSK 139

Query: 121 QSLVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKTAG 154
           QSLVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKTAG
Sbjct: 140 QSLVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKTAG 184

[Close]

BLAST of HG10009806 vs. NCBI nr
Match: XP_022961143.1 (ADP-ribosylation factor-like protein 8c [Cucurbita moschata] >XP_023512849.1 ADP-ribosylation factor-like protein 8c [Cucurbita pepo subsp. pepo] >KAG7032720.1 ADP-ribosylation factor-like protein 8c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 291.2 bits (744), Expect = 5.2e-75
Identity = 151/165 (91.52%), Postives = 153/165 (92.73%), Query Frame = 0


Query: 1   MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT 60
           MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT
Sbjct: 20  MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT 79

Query: 61  M------------YVVDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSK 120
           M            YVVDSADRDSVPIS+SELHELLTKPSLSGIPLLVLGNKIDKSEALSK
Sbjct: 80  MWERYCRGVTAIVYVVDSADRDSVPISRSELHELLTKPSLSGIPLLVLGNKIDKSEALSK 139

Query: 121 QSLVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKTAG 154
           QSLVDLLELE+IRDREVCCYMISCKDSINIDVVIDWLIKHSKTAG
Sbjct: 140 QSLVDLLELESIRDREVCCYMISCKDSINIDVVIDWLIKHSKTAG 184

[Close]

BLAST of HG10009806 vs. NCBI nr
Match: KAG6602026.1 (ADP-ribosylation factor-like protein 8c, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 291.2 bits (744), Expect = 5.2e-75
Identity = 151/165 (91.52%), Postives = 153/165 (92.73%), Query Frame = 0


Query: 1   MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT 60
           MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT
Sbjct: 59  MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT 118

Query: 61  M------------YVVDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSK 120
           M            YVVDSADRDSVPIS+SELHELLTKPSLSGIPLLVLGNKIDKSEALSK
Sbjct: 119 MWERYCRGVTAIVYVVDSADRDSVPISRSELHELLTKPSLSGIPLLVLGNKIDKSEALSK 178

Query: 121 QSLVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKTAG 154
           QSLVDLLELE+IRDREVCCYMISCKDSINIDVVIDWLIKHSKTAG
Sbjct: 179 QSLVDLLELESIRDREVCCYMISCKDSINIDVVIDWLIKHSKTAG 223

[Close]

BLAST of HG10009806 vs. NCBI nr
Match: XP_022991181.1 (ADP-ribosylation factor-like protein 8c [Cucurbita maxima])

HSP 1 Score: 289.7 bits (740), Expect = 1.5e-74
Identity = 150/165 (90.91%), Postives = 152/165 (92.12%), Query Frame = 0


Query: 1   MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT 60
           MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT
Sbjct: 20  MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT 79

Query: 61  M------------YVVDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSK 120
           M            YVVDSADRDSVPIS+SELHELLTKPSLSGIPLLVLGNKIDKSEALSK
Sbjct: 80  MWERYCRGVTAIVYVVDSADRDSVPISRSELHELLTKPSLSGIPLLVLGNKIDKSEALSK 139

Query: 121 QSLVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKTAG 154
           QSLVDLLELE+IRDREVCCYMISCKDSINID VIDWLIKHSKTAG
Sbjct: 140 QSLVDLLELESIRDREVCCYMISCKDSINIDAVIDWLIKHSKTAG 184

[Close]

BLAST of HG10009806 vs. ExPASy Swiss-Prot
Match: Q8W4C8 (ADP-ribosylation factor-like protein 8c OS=Arabidopsis thaliana OX=3702 GN=ARL8C PE=2 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 4.7e-71
Identity = 135/164 (82.32%), Postives = 148/164 (90.24%), Query Frame = 0


Query: 1   MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT 60
           MELSLVGLQNAGKTSLVN+IATGGYSEDMIPTVGFNMRKVTKGNVTIK+WDLGGQRRFRT
Sbjct: 20  MELSLVGLQNAGKTSLVNAIATGGYSEDMIPTVGFNMRKVTKGNVTIKIWDLGGQRRFRT 79

Query: 61  M------------YVVDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSK 120
           M            YV+D+ADRDSVPIS+SEL++LLTKPSL+GIPLL+LGNKIDKSEALSK
Sbjct: 80  MWERYCRGVSAIVYVIDAADRDSVPISRSELNDLLTKPSLNGIPLLILGNKIDKSEALSK 139

Query: 121 QSLVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKTA 153
           Q+LVD L LE++ DREVCCYMISCKDSINID VIDWLIKHS+TA
Sbjct: 140 QALVDQLGLESVTDREVCCYMISCKDSINIDAVIDWLIKHSRTA 183

[Close]

BLAST of HG10009806 vs. ExPASy Swiss-Prot
Match: Q8VY57 (ADP-ribosylation factor-like protein 8a OS=Arabidopsis thaliana OX=3702 GN=ARL8A PE=2 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 5.8e-61
Identity = 118/163 (72.39%), Postives = 137/163 (84.05%), Query Frame = 0


Query: 1   MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT 60
           MELSL+GLQNAGKTSLVN +ATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQ RFR+
Sbjct: 20  MELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRS 79

Query: 61  M------------YVVDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSK 120
           M            YVVD+AD D++ +SKSELH+LL+K SL+GIPLLVLGNKIDK  ALSK
Sbjct: 80  MWERYCRAVSAIVYVVDAADPDNLSVSKSELHDLLSKTSLNGIPLLVLGNKIDKPGALSK 139

Query: 121 QSLVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKT 152
           ++L D + L ++ DREVCC+MISCK+S NID VIDWL+KHSK+
Sbjct: 140 EALTDEMGLTSLTDREVCCFMISCKNSTNIDQVIDWLVKHSKS 182

[Close]

BLAST of HG10009806 vs. ExPASy Swiss-Prot
Match: Q93Y31 (ADP-ribosylation factor-like protein 8b OS=Arabidopsis thaliana OX=3702 GN=ARL8B PE=2 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 9.9e-61
Identity = 117/164 (71.34%), Postives = 139/164 (84.76%), Query Frame = 0


Query: 1   MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT 60
           MELSL+GLQNAGKTSLVN +ATGGYSEDMIPTVGFNMRKVTKG+VTIKLWDLGGQ RFR+
Sbjct: 20  MELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRS 79

Query: 61  M------------YVVDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSK 120
           M            YVVD+AD D++ +SKSELH+LL+K SL+GIPLLVLGNKIDK  ALSK
Sbjct: 80  MWERYCRSVSAIVYVVDAADPDNLSVSKSELHDLLSKTSLNGIPLLVLGNKIDKPGALSK 139

Query: 121 QSLVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKTA 153
           ++L D + L+++ DREVCC+MISCK+S NID VIDWL+KHSK++
Sbjct: 140 EALTDEMGLKSLTDREVCCFMISCKNSTNIDQVIDWLVKHSKSS 183

[Close]

BLAST of HG10009806 vs. ExPASy Swiss-Prot
Match: Q6NZW8 (ADP-ribosylation factor-like protein 8B-A OS=Danio rerio OX=7955 GN=arl8ba PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 5.5e-51
Identity = 98/163 (60.12%), Postives = 124/163 (76.07%), Query Frame = 0


Query: 1   MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT 60
           MEL+LVGLQ +GKT+ VN IA+G +SEDMIPTVGFNMRKVTKGNVTIK+WD+GGQ RFR+
Sbjct: 21  MELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRS 80

Query: 61  M------------YVVDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSK 120
           M            Y+VD+ADR+ V  S++ELH LL KP L GIP+LVLGNK D   AL +
Sbjct: 81  MWERYCRGVNAIVYMVDAADREKVEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDE 140

Query: 121 QSLVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKT 152
           + L++ + L  I+DRE+CCY ISCK+  NID+ + WLI+HSK+
Sbjct: 141 KQLIEKMNLAAIQDREICCYSISCKEKDNIDITLQWLIQHSKS 183

[Close]

BLAST of HG10009806 vs. ExPASy Swiss-Prot
Match: F4IZ82 (ADP-ribosylation factor-like protein 8d OS=Arabidopsis thaliana OX=3702 GN=ARL8D PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 5.5e-51
Identity = 103/163 (63.19%), Postives = 124/163 (76.07%), Query Frame = 0


Query: 1   MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT 60
           MELSLVGLQN+GKTSLVN +ATG YSEDMIPTVGFNMRKVTK NV I+LWDLGGQ RFR 
Sbjct: 12  MELSLVGLQNSGKTSLVNVVATGEYSEDMIPTVGFNMRKVTKENVAIRLWDLGGQPRFRC 71

Query: 61  M------------YVVDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSK 120
           M            YVVD+AD +++ +S+SELH+LL+  SL GIPLLVLGNKID   ALSK
Sbjct: 72  MWERYCRAVSMIVYVVDAADTENLSVSRSELHDLLSNASLIGIPLLVLGNKIDIHGALSK 131

Query: 121 QSLVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKT 152
           ++L + + L ++  REVCC MISCK+   ID + DWL+ HSK+
Sbjct: 132 EALTEEMGLSSVTSREVCCLMISCKNPTTIDQLTDWLVNHSKS 174

[Close]

BLAST of HG10009806 vs. ExPASy TrEMBL
Match: A0A0A0KN64 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G424890 PE=3 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 3.9e-76
Identity = 153/165 (92.73%), Postives = 153/165 (92.73%), Query Frame = 0


Query: 1   MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT 60
           MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT
Sbjct: 20  MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT 79

Query: 61  M------------YVVDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSK 120
           M            YVVDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSK
Sbjct: 80  MWERYCRGVTAIVYVVDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSK 139

Query: 121 QSLVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKTAG 154
           QSLVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKTAG
Sbjct: 140 QSLVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKTAG 184

[Close]

BLAST of HG10009806 vs. ExPASy TrEMBL
Match: A0A1S3CDX0 (ADP-ribosylation factor-like protein 8A OS=Cucumis melo OX=3656 GN=LOC103499330 PE=3 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 5.1e-76
Identity = 152/165 (92.12%), Postives = 153/165 (92.73%), Query Frame = 0


Query: 1   MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT 60
           MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT
Sbjct: 20  MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT 79

Query: 61  M------------YVVDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSK 120
           M            Y+VDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSK
Sbjct: 80  MWERYCRGVTAIVYIVDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSK 139

Query: 121 QSLVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKTAG 154
           QSLVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKTAG
Sbjct: 140 QSLVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKTAG 184

[Close]

BLAST of HG10009806 vs. ExPASy TrEMBL
Match: A0A6J1HB08 (ADP-ribosylation factor-like protein 8c OS=Cucurbita moschata OX=3662 GN=LOC111461740 PE=3 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 2.5e-75
Identity = 151/165 (91.52%), Postives = 153/165 (92.73%), Query Frame = 0


Query: 1   MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT 60
           MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT
Sbjct: 20  MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT 79

Query: 61  M------------YVVDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSK 120
           M            YVVDSADRDSVPIS+SELHELLTKPSLSGIPLLVLGNKIDKSEALSK
Sbjct: 80  MWERYCRGVTAIVYVVDSADRDSVPISRSELHELLTKPSLSGIPLLVLGNKIDKSEALSK 139

Query: 121 QSLVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKTAG 154
           QSLVDLLELE+IRDREVCCYMISCKDSINIDVVIDWLIKHSKTAG
Sbjct: 140 QSLVDLLELESIRDREVCCYMISCKDSINIDVVIDWLIKHSKTAG 184

[Close]

BLAST of HG10009806 vs. ExPASy TrEMBL
Match: A0A6J1JQ11 (ADP-ribosylation factor-like protein 8c OS=Cucurbita maxima OX=3661 GN=LOC111487854 PE=3 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 7.3e-75
Identity = 150/165 (90.91%), Postives = 152/165 (92.12%), Query Frame = 0


Query: 1   MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT 60
           MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT
Sbjct: 20  MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT 79

Query: 61  M------------YVVDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSK 120
           M            YVVDSADRDSVPIS+SELHELLTKPSLSGIPLLVLGNKIDKSEALSK
Sbjct: 80  MWERYCRGVTAIVYVVDSADRDSVPISRSELHELLTKPSLSGIPLLVLGNKIDKSEALSK 139

Query: 121 QSLVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKTAG 154
           QSLVDLLELE+IRDREVCCYMISCKDSINID VIDWLIKHSKTAG
Sbjct: 140 QSLVDLLELESIRDREVCCYMISCKDSINIDAVIDWLIKHSKTAG 184

[Close]

BLAST of HG10009806 vs. ExPASy TrEMBL
Match: A0A6J1CL74 (ADP-ribosylation factor-like protein 8c OS=Momordica charantia OX=3673 GN=LOC111011982 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 3.6e-74
Identity = 148/165 (89.70%), Postives = 152/165 (92.12%), Query Frame = 0


Query: 1   MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT 60
           MELSLVGLQNAGKTSLVN+IATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFR 
Sbjct: 20  MELSLVGLQNAGKTSLVNAIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRM 79

Query: 61  M------------YVVDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSK 120
           M            YVVDSADRDSVPIS+SELHELLTKPSLSGIPLLVLGNKIDKSEALSK
Sbjct: 80  MWERYCRGVSAIVYVVDSADRDSVPISRSELHELLTKPSLSGIPLLVLGNKIDKSEALSK 139

Query: 121 QSLVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKTAG 154
           QSLVDLLELE+IRDREVCCYMISCKDS+NIDVVIDWLIKHSKTAG
Sbjct: 140 QSLVDLLELESIRDREVCCYMISCKDSVNIDVVIDWLIKHSKTAG 184

[Close]

BLAST of HG10009806 vs. TAIR 10
Match: AT5G37680.1 (ADP-ribosylation factor-like A1A )

HSP 1 Score: 268.5 bits (685), Expect = 3.4e-72
Identity = 135/164 (82.32%), Postives = 148/164 (90.24%), Query Frame = 0


Query: 1   MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT 60
           MELSLVGLQNAGKTSLVN+IATGGYSEDMIPTVGFNMRKVTKGNVTIK+WDLGGQRRFRT
Sbjct: 20  MELSLVGLQNAGKTSLVNAIATGGYSEDMIPTVGFNMRKVTKGNVTIKIWDLGGQRRFRT 79

Query: 61  M------------YVVDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSK 120
           M            YV+D+ADRDSVPIS+SEL++LLTKPSL+GIPLL+LGNKIDKSEALSK
Sbjct: 80  MWERYCRGVSAIVYVIDAADRDSVPISRSELNDLLTKPSLNGIPLLILGNKIDKSEALSK 139

Query: 121 QSLVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKTA 153
           Q+LVD L LE++ DREVCCYMISCKDSINID VIDWLIKHS+TA
Sbjct: 140 QALVDQLGLESVTDREVCCYMISCKDSINIDAVIDWLIKHSRTA 183

[Close]

BLAST of HG10009806 vs. TAIR 10
Match: AT3G49870.1 (ADP-ribosylation factor-like A1C )

HSP 1 Score: 235.0 bits (598), Expect = 4.1e-62
Identity = 118/163 (72.39%), Postives = 137/163 (84.05%), Query Frame = 0


Query: 1   MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT 60
           MELSL+GLQNAGKTSLVN +ATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQ RFR+
Sbjct: 20  MELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRS 79

Query: 61  M------------YVVDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSK 120
           M            YVVD+AD D++ +SKSELH+LL+K SL+GIPLLVLGNKIDK  ALSK
Sbjct: 80  MWERYCRAVSAIVYVVDAADPDNLSVSKSELHDLLSKTSLNGIPLLVLGNKIDKPGALSK 139

Query: 121 QSLVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKT 152
           ++L D + L ++ DREVCC+MISCK+S NID VIDWL+KHSK+
Sbjct: 140 EALTDEMGLTSLTDREVCCFMISCKNSTNIDQVIDWLVKHSKS 182

[Close]

BLAST of HG10009806 vs. TAIR 10
Match: AT5G67560.1 (ADP-ribosylation factor-like A1D )

HSP 1 Score: 234.2 bits (596), Expect = 7.0e-62
Identity = 117/164 (71.34%), Postives = 139/164 (84.76%), Query Frame = 0


Query: 1   MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT 60
           MELSL+GLQNAGKTSLVN +ATGGYSEDMIPTVGFNMRKVTKG+VTIKLWDLGGQ RFR+
Sbjct: 20  MELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRS 79

Query: 61  M------------YVVDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSK 120
           M            YVVD+AD D++ +SKSELH+LL+K SL+GIPLLVLGNKIDK  ALSK
Sbjct: 80  MWERYCRSVSAIVYVVDAADPDNLSVSKSELHDLLSKTSLNGIPLLVLGNKIDKPGALSK 139

Query: 121 QSLVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKTA 153
           ++L D + L+++ DREVCC+MISCK+S NID VIDWL+KHSK++
Sbjct: 140 EALTDEMGLKSLTDREVCCFMISCKNSTNIDQVIDWLVKHSKSS 183

[Close]

BLAST of HG10009806 vs. TAIR 10
Match: AT3G49860.1 (ADP-ribosylation factor-like A1B )

HSP 1 Score: 201.8 bits (512), Expect = 3.9e-52
Identity = 103/163 (63.19%), Postives = 124/163 (76.07%), Query Frame = 0


Query: 1   MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT 60
           MELSLVGLQN+GKTSLVN +ATG YSEDMIPTVGFNMRKVTK NV I+LWDLGGQ RFR 
Sbjct: 12  MELSLVGLQNSGKTSLVNVVATGEYSEDMIPTVGFNMRKVTKENVAIRLWDLGGQPRFRC 71

Query: 61  M------------YVVDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSK 120
           M            YVVD+AD +++ +S+SELH+LL+  SL GIPLLVLGNKID   ALSK
Sbjct: 72  MWERYCRAVSMIVYVVDAADTENLSVSRSELHDLLSNASLIGIPLLVLGNKIDIHGALSK 131

Query: 121 QSLVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKT 152
           ++L + + L ++  REVCC MISCK+   ID + DWL+ HSK+
Sbjct: 132 EALTEEMGLSSVTSREVCCLMISCKNPTTIDQLTDWLVNHSKS 174

[Close]

BLAST of HG10009806 vs. TAIR 10
Match: AT5G14670.1 (ADP-ribosylation factor A1B )

HSP 1 Score: 84.7 bits (208), Expect = 6.9e-17
Identity = 52/163 (31.90%), Postives = 79/163 (48.47%), Query Frame = 0


Query: 1   MELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRT 60
           M + +VGL  AGKT+++  +  G      IPT+GFN+  V   N++  +WD+GGQ + R 
Sbjct: 18  MRILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRP 77

Query: 61  M------------YVVDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSK 120
           +            +VVDS DRD V  ++ ELH +L +  L    LLV  NK D   A++ 
Sbjct: 78  LWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNA 137

Query: 121 QSLVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKT 152
             + D L L ++R R              +   +DWL  +  T
Sbjct: 138 AEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAT 179

The following BLAST results are available for this feature:

BLAST of HG10009806 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140300.1	8.0e-76	92.73	ADP-ribosylation factor-like protein 8c [Cucumis sativus] >XP_038876072.1 ADP-ri...	[more]
XP_008460532.1	1.1e-75	92.12	PREDICTED: ADP-ribosylation factor-like protein 8A [Cucumis melo]	[more]
XP_022961143.1	5.2e-75	91.52	ADP-ribosylation factor-like protein 8c [Cucurbita moschata] >XP_023512849.1 ADP...	[more]
KAG6602026.1	5.2e-75	91.52	ADP-ribosylation factor-like protein 8c, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_022991181.1	1.5e-74	90.91	ADP-ribosylation factor-like protein 8c [Cucurbita maxima]	[more]

BLAST of HG10009806 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W4C8	4.7e-71	82.32	ADP-ribosylation factor-like protein 8c OS=Arabidopsis thaliana OX=3702 GN=ARL8C...	[more]
Q8VY57	5.8e-61	72.39	ADP-ribosylation factor-like protein 8a OS=Arabidopsis thaliana OX=3702 GN=ARL8A...	[more]
Q93Y31	9.9e-61	71.34	ADP-ribosylation factor-like protein 8b OS=Arabidopsis thaliana OX=3702 GN=ARL8B...	[more]
Q6NZW8	5.5e-51	60.12	ADP-ribosylation factor-like protein 8B-A OS=Danio rerio OX=7955 GN=arl8ba PE=2 ...	[more]
F4IZ82	5.5e-51	63.19	ADP-ribosylation factor-like protein 8d OS=Arabidopsis thaliana OX=3702 GN=ARL8D...	[more]

BLAST of HG10009806 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KN64	3.9e-76	92.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G424890 PE=3 SV=1	[more]
A0A1S3CDX0	5.1e-76	92.12	ADP-ribosylation factor-like protein 8A OS=Cucumis melo OX=3656 GN=LOC103499330 ...	[more]
A0A6J1HB08	2.5e-75	91.52	ADP-ribosylation factor-like protein 8c OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1JQ11	7.3e-75	90.91	ADP-ribosylation factor-like protein 8c OS=Cucurbita maxima OX=3661 GN=LOC111487...	[more]
A0A6J1CL74	3.6e-74	89.70	ADP-ribosylation factor-like protein 8c OS=Momordica charantia OX=3673 GN=LOC111...	[more]

BLAST of HG10009806 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G37680.1	3.4e-72	82.32	ADP-ribosylation factor-like A1A	[more]
AT3G49870.1	4.1e-62	72.39	ADP-ribosylation factor-like A1C	[more]
AT5G67560.1	7.0e-62	71.34	ADP-ribosylation factor-like A1D	[more]
AT3G49860.1	3.9e-52	63.19	ADP-ribosylation factor-like A1B	[more]
AT5G14670.1	6.9e-17	31.90	ADP-ribosylation factor A1B	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 1..17 score: 26.45 coord: 127..149 score: 18.79 coord: 38..60 score: 27.96
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 1..152 e-value: 2.1E-6 score: -29.8
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..153 e-value: 1.4E-6 score: 37.9
None	No IPR available	PANTHER	PTHR45732	ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 8	coord: 1..152
None	No IPR available	PANTHER	PTHR45732:SF12	ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 8C	coord: 1..152
None	No IPR available	PROSITE	PS51417	ARF	coord: 1..149 score: 13.125666
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 3..143 e-value: 1.4E-12 score: 45.7
IPR006689	Small GTPase superfamily, ARF/SAR type	PFAM	PF00025	Arf	coord: 4..147 e-value: 2.0E-31 score: 108.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..152 e-value: 1.1E-43 score: 150.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 3..148
IPR044154	ADP-ribosylation factor-like protein 8A/8B	CDD	cd04159	Arl10_like	coord: 2..148 e-value: 9.81884E-86 score: 246.076

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10009806.1	HG10009806.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
cellular_component	GO:0005774	vacuolar membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding