HG10009752 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10009752
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	protein TIC 40, chloroplastic isoform X1
Location	Chr06: 9743079 .. 9757493 (+)
RNA-Seq Expression	HG10009752
Synteny	HG10009752

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACAGGCTCAATTTAGCCCTAACATCTCCTCCCAAGTTTGTTTTTCTCACATATTCTTCTACTTCTTCTATCTCCACTCCCACCAGAACCAATCAATTATGTGGAAGCAGGCGCTTGGCAAGCTCCAGGATTAAGTCTCCTCCCAGAATTTTTGCTTCTGCTGTTAATCGTCGACCCAACCACCGTATCCTCGGTAATTTTCGAATTCCCTATTGAAAATGATGTTTAAAAGTCGCTTGTAATCTTCACTCCTTCTTATTTGATTGTTCTCTGTTTTCTTCGCTACCGTGGAAAGCAGTGACTGAACGGTTTGCAACGGTTTCTTCTTCGACTACCAGCAATGATTCGTCTTCTGTTGGTGTTCCATCAGTATCTATTCCTCCTCCCTCCTCATATGTGTAAATTTTCGTTTCCTTATCTTTCATTTTTACTTGGTTTTTGGAATTCAGTTCTATGGTTTTTTTTCCCTCTTAAGAAATGGGTTTGATTGAATATATATGACATGAATTAAGGTCAGTATATTAGATGCAACTGACAGCTTTGTTCTGGTTGCAACTTTTTTAGAGGGTCGCCTCTCTTTTGGGTTGGTGTTGGTGTTGGGCTTTCAGCATTATTTACATGGGTGAGTGAGAACCAAACCTGTTTGTCTGAACTGCATATTTTTCTAATGCGGATATAATTAAATTTATCAACAAGCTCTTAGGCTGAATGTTCTTTTAACAATTTTTTTTGAAAAAATTGCAGGTGGCTTCTTACTTAAAGGTGAGTTTTCTTCTACAAGGTATGGGATTGTGATTGTGCCTTATAAACTGTTTCCTGCTAGAGTTGGTCTTCTATAGCTCTCTCTTAGCTTGCAGTTGCACCCATATTCTTCTGAAATGTTATTCTCTCTGCGTGGAGTTCTACACGATACCAGTTTATTGTCTGTGCAGTTGTTGACCTTTGAAAAGTTGTATCATCCATTTATACAAAAACTTTCTGCACTTTTGTTGTTGGAAAAAAGGTGGTGAATAACCCTTCTTTGCTGCTCATCTCATTATTATTAATATTACCTATAACTTTGATTTTTTTTTTTCAATTCGTTTTTGCATGAAAAATGTATTTCACATCTACAGGGTTCTTCTGTTTTCCTTTTTTATTTATCACGTTACTTTTCTGATTGAAATAGCCACAAAACCCTCATTGAAATCTTGTGAAACTCTCAAGTTTAAAGATTAGTAAATGAATGTAGGAAAACTATATGCTAGCGTTTTGGATTTTGGTATCACATTCTGATGTTTTGCATTGATGTTTTTATAATTCTGTGTTTTATAAGTGGTAAAACTTACGTGGGTTTAAGGGAACCAATTTACAGTTGAGGGAAATTTGGTAGCCTCTTTCTTTCCTACAACTGTGTTTCTACTAATTTTTTTGCATTATCAGACATTCATACCTTACACTTTTCAACTATTAATACTAGTTTACTTTTGATGCTTCCATTCTTTCATTAATATGTTGTTTTCTCAATCCTCATATTCATGCCTATTGACCAAGTTCTATCATTAATAGATTGATCCCCACCCTCGTCACATTTTCTTTTGTAAACATCAATGATTGGGGGACTATAAAAATGTTCTATCTTTCCCTTTCATAAAAAGATTTGTGTTTTAGTTCATAATAATGTTTCTATTTACTCCTCCCAAAGCAGAATCTTTTCCAGTACTTTTTCTTCCATTTGCCCTTCTACATTTCTATGGGTCTTTGGTTTCTATAAGATCGTTGTACCATTTTCTTCTTGCATATAAGTTACAACTTGGATCATTACTAACCTTGACCTGTCTGTGTGTTTCTTTTGTTCCTATATATTTTATTGTAAATTTGTAATTACATTCCAGAAATATGCAATGCAACAAGCTTTCAAGACGATGATGTCTCAAATGAATTCTCAAAACAGCCCAATGAGTAATCCTACTCTGTCGTCTGGATCACCTTTTCCAATACCTCCGACATTTGCAACTGGCACAACAGTTTCTCCATCTGTTTCTGAACCTGCTGCGTCAATTGATGTAACTGCAACAAAAGTTGAAGACGAACCAGTTATTAATGTCAAAAGTGGGACAGAGAACATGGAAGCAAAGAAGTTTGGTAACTAAGGATCCTCCTCCTATAATATCATTTCAATTTGTTGGTGGTTCTTGATTTATTTTTATGATATGATTTCTGTGCTCCCAAGTGACAACCCTCTTGGCTGAAGGCTTGAATGTTTGGGATACAAATGTCAAGGTTTACATTTTAGTCCGTTTGATGAGCATGACTGAATAATCTTTTAGGTTTTATTGTATCTTGGTATTGGTGTGTGAACAGTATCTTCCGTAACCTTCAGGATTTGTTGCTTCTCAACTAACTTTACGACATTTTGGTATCAAAACTCAAATGGATTTATAATATCTTCAATTTCTTACCTCCTTATTTCATTCGTCAATAAAATTTGTTTCCCTTCTCAAAAATTATCTTCACTTCCTGACTTCCAAGGTAGGAGACTAATTCATGAAACTTTTTTTCACAGCTTTTGTAGACGTTTCTCCTGAAGAAACTGACCAAAAGAGTCCATTCAAGGAAGATGCCACAGACACAGATGTTTCAAAGAGTGCTCAGCCGACTGAGGAAGTAAGTTTGTGTTTTTTAGCTGTGTGGTGGCTAGCGTTGATTTGATATGGTGACTTACGCTGAGATTTTTTTTATGAAGCTTCCATTGAATGGAGCTGCTTCTAAGCAGGCGTTTAATGCTTCAGATGGATCACAATTCAGTCGTAAGTTGAGAACAATAAATGTTGTTACTTCCCCCCCCCACACCCCCTGGGGCAATAATTACTTAAATAGAAAGTAAAACGGAAAACCATCATGGGTTGGCCTAGTGGTAAAAAGGAGACAAAGTCTCAATAAATGGCTAAGAGGTCATGGGTTCAATTCATGGTGGCCACCTACCTAGGAATTAATTTCCTATGAGTTTCCTTGACACCCAAATGTTGTAGGGTCAGGTGGGTTGTCCCGTGAGATTAGTCGAGGTGCGCGTAAGCTGGCCCGGACACTCACGGATATCAAAAAAAAAAAAAAGAAAGTAAAACAGAATGGCACGGCAACTCAAAACCCAGTCTGAAAAAATAAGAGAATTTTGATCTACACATTGACATACCCTTATAAATTTAACCTCGTTATTTGATATTTCCGTCTCATAAATTTTCTTTCTTAATTTCTATGTTTTTTTGTTATTTTTTTTTCTTTTTTCGGTGCTTCAAGGCATTCATGATTGAATGTGTATTACTGCAGTTTAGTTATTGCATAAGTTTTATTAAAATCTATGATATTCTCATCTATTAGGAAAACCTGGCTCAGTCTTATCAGTGGAAGCCGTGGAGAAAATGATGGAAGATCCGACAGTACAGAAGATGATATATCCGTATGCAGCTTTTACTGTTTATCTACTTCATAATTTGGTTGCCCCATATATATGTATGTTTTTATCAGTGGAAACACATCGCTGTATTCAAAATAAAGAAGTAAATAGAAATGTGTGGAAATAGGCATTGCTTCACATATTTAAATGCAAAGAATTTACAGTACATCAAGCCAATTTGGTAATAAATATCGAAGGATACTGACTTTAGGTCCTGTTATCTGCCAGCGTCACTTGCCCCAAACTATATTTTCTATATAATAGAGTTCCACAGGGAAGTTTACCAAAAAAAAGAGTTCCACAGGGAAGAGGATCAAGAGGAGTTCTTCACAATCTCTTGGAGATTTAAGCTTATTTTTTATACTCAATACTTCCTGAGCTAAGCCCACCTAATTTTTTATGATAGGAATTAATATTCCACCCGACTAAATGGTTGTCTCCTCAAGGAAATCTCATACTTTTTTCAGTAGTCATGATGATATTTATTGAAATTTTGCATAGGTAGAAATATTAGAGAGGAAATGAGTGTAACTCTGCCACCTTTTGAAAAATAAGTGCTCTTCCGTCCTTTCCATCTTCTCTTTGACATTGGTGGTGAAGTTAACAACTTCATTCATTTTGAACTCAGATGATATCTTTAAGAAACGCTGTTTCAAAAATCTCTGAAAGTTCTTTGGAGATTAACCGGTGAAATCATCGCCTTGGGGCATTCTTATCAACCAACTCAAGGATAATTTCTTTGGTTTCTTTTTTTTAATGTTTCTTAGGGCTAACCTTGGAAGACTCAGTAGTAGACTAGTAGGAGCCATCAGGGAAATTGGAATGAAAGTTGCTTTAGAATGTTTTTTTTGGGATAAAGTTTTTAGCAAGGTCTACAATATTACTGTCTCATTTTCTCTAACTCAGTGAGGACCTAACAACTGCCACTTCCTGCCTGTTGATAAAGAGAACAATTTGTTAATCTGAAAGAATGATGTACATTGTACATATTTACATTCCGTATCCAAGGACCAGAATCAGATGTAATGATATCCTTGCACCAACTGTTTCTTTTCATTGAATTGAAGTTTTGGTCATAAGACTCTTCACTATGCACAAATGCTTATTCTGTTTTCCACCATGCCTTGGGTGTTTAATGCCCTCTTCTTTTCTAGGTGAATATATTTTCTGCCTTATAGGTTCTTTTATTGCTTGCCTTGTTGCATTTGCTTGTAACTTGTATGACCATTTCCTGAAGCAGCTTACAGATAGATTTGATTCATGAGTACTTGAAATTGTGTTGATTTCTGAAAGGAAGACATTTTTCATCTTACAGCCATTTGCCCGAGGAGATGAGAAATCCAGAAACATTCAAGTGTAAGTCTATTGGTTAATGCAATCTTCAGGCAATATGTCTTCTATAAGCAATGAGAAAGGAGGGTATAAATCATTAAGGTGAAGGCCCAGGGGTGTTCCTGCTGAAGATAGAAGCAGAAACCCTGGTAGGGGGGAGGGTATGCTGGAAGTAAATAAGAAAAAAATTAATGAGAAGAAAAAAAAAAAAGAAAGAAAGAAAAAAGAAAAGAAAAGAAAATGAATGTGTGAACTAAGTGGGTACTGTGAATGCAAGGAAGAAATTAGCTGTACTAAGTGATTCTAACGAGATGCAAGCTAGTTTTTCAATTCTGTTTTAACCTTCTAAAATAAAAATTTGGGAAAAAATCAATTTACACCCCTAAACTTTTGAGAGTTCTATCAATTTAAACCCTGAACTAATAATTGTATCAATTTAAACCCTAAACTTTCGTAATTGTATCAATTTACACCCTCCATTACGTTTTGTTTGGATAAATATCGTGTGAGACTTATAATTTTATCAATTCAACCCTAAACTTTCATAAGTGAATCAATTTGGACTCTCAATTAAAATTTCATTTGAAAACTGTCCATGCATCTAGTCTAGATCGTCCATTTTATCAATCTGACATTTGAAGAAGTCTACACACGTGTGAGAATTGAATGCATTGACAATTTTCAAATGTAATCTTAATAAAAAGGTCTAAATTAATTCACTTGTAACAATTTAAAAATTTAATTGAAATAATTGATACAGAAAGTTCAAAGTTTAAATTGATTCGATTATTTAAAAGTTTTGTAGTTTTCTAGAAAATACAGGATTAACTATTCAACCACAACATGGAAGTATGATTATTATAGTGTCACATATTGTACTATTATTCTTTAGCAGCCTTTTAGATAAATAAAAGTGAAAGATATATTATTTGGCCTTTCTTACCACCTTTCTTTTGTTTTGTTTTTTTTTTTTTTTTTTTGCTAATCCTACTACTACTTATATTCAGATTTACTATTCATTTGGACTTTCTATACATTTATTTTGAACTTCACAATCTAGAATCAATTTCTGGTGTTTCTGTGATTTTCTTTTGGGGGCATACTTGGGAGATTGGCTACTTAGTTTGAAATTTTACTCGACCAGTTTCTATTTTCTAATCTTCAACAAGGCATCACTTATTGATTAACTATATTGAATAGGGATGATGCAAAATCCATTATATCGTCAACAATTAGAAGAAATGCTGTAAGTTCAGTTTATTTATTTATTTTTCCTCCTTTAAAGAAATATTTATTTAATTCTGTTCAATGGCTTCTTTATATATCATGTTAGTTTGAATATTCATGTGATCAATCCTTTATGCTTCGTGCTTTTGCTTTCTTTGTCTTTTCATGTCTGCTCCTAAAATCTTCAAGTAGCTTAAGCCAGCACTGTCGTTTTCATACTTTTGAAACTATACACAAGTCTTATATTTAATTTTATTGAACATTTTTGTAAGATATCAAATTGCGGAACATGCTTCGTAATGTTGTAATCCAATGTTTTTCCGATTAAGCGTGATCAGTGCTTTAAATGCATGATGCAAGCGGCTAAGATCCTGTTTTTCACATAAAACTGAAATTCTAAGACTGAGTTTAACATGATTTATAAAATGGCGAAATGCTTTTTAAGTTCATATTATATTGCTCAAGTGTTCACTTTTGGAAAGATTGTTGTGCGGGTGAATAAGCCCCTCTGTGAGTTGTTCCACGTCTTTATTATCTTCCAAGTAAGAACTAAGAAGTTGCTGTACTCTATAAGTCAGAGAATGAATCTCTCAAAAAGTATGTTCCATAAGACTTGAGTTACATATATATAGGCGAATAAGAAACCCTAATCTAGACAATGTGAAATTACACTTAAGGACAATATACATAGATAATTACAATTAAGGACGTATTCTAACACTCCTCCTCAAGCTGGAGCAAATATATCAATCATGCCCAGCTTGTTACATAGATAATTTATTCTTGCTCCATTCACAGCTTTGATAAGAATATCTCCCAACTGTTTTCCAGTCTTCACATATCCTGTAGATATCACTTCTTCTTGTATTTTTTCACGAATGAAATGACAGTCCACTTCAATATGTTTAGTTCGTTCATGAAACACTGGGTTGGATGCAATATGCATAGCAGCTTGATTATCACACCATAATTTAGCTGGCACGGTAACGCTAAACCCCATCTCAGATAAAAGTTGATGTATCCACATTATCTCACACACAGATTGTGCCATAGCTCTATATTCTGACTCCGCACTCGAGCGTGAAACTACATTCTGTTTCTTACTTTTCCACGACACTAAGTTTCCTCCAACAAAAACACAATATCCAGTCGTCGATCTCCTATCTTCTCGAGATCCAGCCCAATCTGCATCTGAAAAACACTCAACCCTTGTGTGGCCATGATCTTTATATAAGATCCCACGTCCAGGTGCAGTTTTTAGATAACATAAAATTTGTTCTACTGCAGCCCAATGATCTATTGTAGGAGAAGACATAAACTGACTCACTATACTCACAGCATAAGCAATGTCTGGTCGTGTCACTGTTAAATAGTTCAACTTCCCGACTAGTCTTCTATATCTCTCAGGGTCTTTAAACAATTCACCTTCTTTGACAAGTAGCAAATTTGGTATCATTGGAGTACTACATGGTTTGACTCCTAGTTTTCCAGTCTCAGACAACAAATCAAGTACATATTTTCGTTGTGATAGATAAATACCTTTCTTGCTCCTCATTACTTCAATACCCAAGAAGTATTTTAACTCTCCCAAATCTTTAGTATGAAACTGACCCTGAAGAAAAGTTTTAAGAGAGGATATACATGATACATCATTGCCAGTGATAACAATATCATCAACATACACAACTAGCAAAGTAATACCATGCTCTGATCGTCGATAAAATACAGAATGATCAGATGTACTTTTCTTCATACCAAAACATTCAAGGGCTTGACTAAACTTACCAAACCATGCACGAGGGCTCTGTTTCAATCCATACAAAGATTTTCGAAGTTGACACACTTTACCACTCTCCCCCTGAGCAACAAACCCAGGTGGTTGCTCCATATAAACTTCTTCTTGAAGATCACCATGTAGAAAAACATTCTTAATATCAAGTTGATGCAAAGACCACTTGTGAGTAGCAGCCATGGAAAGAAACAATCGAATGGAAGTCAATTTGGCAACAGGAGAAAAAGTATCAGAATAATCAGTCCCATAGATTTGGGCTTAACCCTTGGCAACAAGGCGAGCTTTCAGACGAGCCACTGTGCCGTCAGGATTGAATTTGATAGCAAACACCCATTTACACCCAATTGCCTTCTTGCCTGCCGGCGGAGACACTAAATCCCAAGTACCATTGTCATCCAAAGCAGTCATCTCCTCAATCATTGCACTACGCCACCCAGGATGAGATAAAGCTTCATGAACAGAGTTAGGAATAGAGGTGGAATCAAGAGATGTAAGAAAGGAATAAGTGGGAGGAGACAACTGGTTATACGAAACAAATGAAGCAATAGGATAAGTACAAGTGCGCTTGCCTTTCCGAAGGGCAATAGGAAGATCATCACTCGATCCTGGATCAGATGTCGAAGAAGGTAGAGGTGGAGGACATGTTCCTGTGGGTTGTTGAGGAGGCCGTCTGGAGAAGACTCGAGTAATAGGTGGAGGAGACGAAAGAGAGACAGAAGACGGCGTAGGAAGAGACGGTGTAGGAACGGTAACTTTGGTAATCTCATAAATCAAAAGATCATCATCCTCCCCTTGACAAGAACTTGACGGTGAAGAACTAAAGGGTATATCTTCAAAAAACGTAACATCAGGAGATACAAGATATCTGTTCAGATTAGGAGAATAACAACGATAACCCTTTTGAACACGCGAATAGCCTAAGAATATGCATTTCAACGATTTTGGATCTAACTTAGTACGATGGGGACTAACATCCCGAACAAAACAGACACACCCAAATATCTTAGGAGCAATAGGAAACAAAACACGATAGGGAATCTCACCGCTGAGAACAGAAGAGGGCATTCGATTAACCAGGAAGCAAGCGTTGGAAACAGCATCCGCCCAAAAATGCTTAGGGACATGCATTTGAAAGGATAGGGCTCGAGCTGTTTCAAGTAGGTGTCGGTTTTTTTTTTAGCAACTCCATTTTGAGATGGAGTGTCAGGACACGAGGATTGATGAATGATGCCATTATCACGTAAGTAAGACCCAAGTACATGAGAAAAATATTCACCAGCATTATCAGTGCGCAGGATTTTGATAGAGACATCAAATTGAGTTCGAATTTCAGCATGAAAAGCACAAAAATGAGATAGTAATTAAGAACGATTTTTCATTAAATATAACCAAGTCACACGAGTATAATCGTCAACAAAAGTAACAAAATAGCGAAAACCAGTTTGGGACACAACAGGACACGGACCCCAAATATCAGAGTGAACTAACTCAAATGGAGCACTAGGTCGTTTATGGACTCTAGGACTAGAGCTAAGACGATGAAACTTAGCAAACTGACACGAATCACAATTTAAAGAAGACAAAGAACGAAATTCGGGATAAAGTTTCTTCAACACAGACAATGATGGATGACCTAAACGACAATGAAATTCAAACGGGGATGTAACTCCAGGACAAGCCACAACTTTTGGGATTTGGTGGTCGAAAATGTAAAGGCCTCCTGACTCATGTCCTCTACCAATAATCTTCTTCGTCACATGATCCTGAAACAAGCAATAACCAGGAAAGAATGAGACAAAACAGTTAAGGTCACGAGTAAGTTGGCTAATAGAGATTAAATTAAAAGACAATTGAGGCAAATGTAACATAGAAGACAAAGAGAAGGAAGAAGTAAGATTAACGGTGCCGGAGCCAAGGACATAAGAGGTGGAGCCATCTGCCAAGGTAACAGATGGGGATGAGGTAGGGGACAAAGGACTAGAAAACAAGTTAGAATTACCTATCATATGAGCAGTGGCACCAGAGTCTATGACCCATTTGGTAGATGATGTAAGGAGGCATTTTGTATTACCTGTCTCAGTAATGGTGGCAATAGGAGTCGATGAGGAAGATGCCTGTAGGGATTCTTATACAACAGCTTTCGACAATCACGTTTCAGATGGCCTGGCTTACGACAATAATGACAGACGATCTCCTGAGAATCTGATTTTCGACTATCATAGGTAGGCTTCTGAAAATGGTTAGGCATCCCTGAAGGAGCTCGGGGTTGATCATTCTTGCTTATGAGAGCACTGCTCGGTTGAGACACAGACGAACCAGATTGAGAATTCTCAATACGAAGAACACGACTAAAGGTGTCGTCTAGCGATGGAATGTCAGAATCAGATAGAATCTGTGTTTTAGCCATGCCAAATTCAGGTGACAGCCCATTCAAAAATATCATAACAGCCATCTTTTCTTGTTGAGCTTGCTGAACTTTGATATCAGGGCTGAAAGGTAATAATAAGGCAAGTTCAGCGGCTATCTTTTTAAATCTCATAAAATAGCTTGTAACAGATTCTGCCTTCTGTTCGGCTCGAAAAAACTGCATGCAAACATCAAACATTCGATGGACGTATTCTTTCCCCGAATAAAGAAATTCTAAGAACTCTAAAAGTTCCTTCACCGAATTACAATGATTCACCAAGCCAACGACTTCACTCTCAATGGAGTTCTTAATTTGAAGATAAAGACGAGCATCATCGTGAAGCCAACCCTTTTTCTTATCATCTTTCGGTGGATCCTCAGTTACATGATCATCCATATCAGTACTCAGTAGGTAAAACTGAATCATTCTTCGCCACTCATAGTAATTAGATCCATTTAACTTGTGTTCGGTGATCTTGGATGATACGGGAAGTATATTAGACACCACCATATGTGTCGGTTCAGCCATGACAACTTGTACATCTCGAAAATAGGGTAGATGCAACAAAAAAACAGTGAACCAAGACCCGGAATAGCTAAAACAGCCCCAAAAAGGACCAAAACAGTCACAAACCCTAAGCGCAAAAAGGGTATTTTCGAAATAACCTCACACCCGAGACGATTTTGATGGAACCAAAGGTACAGACAGGTTGGAAACTCAAAACCGAGAAGAACCCAGCTGACGGACGCGGAATCGGATGTCCCACGCGCCTCCACGCGCCGGCGCGTGACGGAGGAGTCCGAAGGTATAGGCGGTGCGTGAGCCTCACGCGCGGCAGTTCCCGACGACTGACGAAGACAGATGGCTTCGGAAGGTGGCGGCGCTTCTTCTGAGGTGGGTGGTGTCGACAAACGGCCACTCGAAATCGATGACCAAAATACAAAACCTTAACTCTGTGAGATTGTTGCCGTCAAACGAAAGTTCGAAAGTTCGAAACCCTAGAGGGCTCTGATACCATGTACTCTACAAGTCAGAGAATGAATCTCTCAAAAAGTATGTTCCATAAGACTTGAGTTACATATATATAGGCGAATAAGAAACCCTAATCTAGACAATGTGAAATTACATTTAAGGACAATATACATAGATAATTACAATTAAGGACGTATTCTAACAGTTGCATTTTGTAGTTTCCATTTTAGCTTCCTCAGATCCTTCTTTGTTTTCTTCGGGCTTTGGACAACCAATTTCTAATAGAGAGGCGTTTGAGGTGATGGACCTTCTTTCTCATCTTCATGATCAACTTGTGCATTGATAGAGAAGGGGCTCTAGGTTACTTTATTATGGGCTTTTCTTGCAGCTCTTTGTTCCTCCTGTTGTCTGTCTGCCCCAAACCAACTCTATTTTCTCCTCCCACTGGAAGGTTAATTTTTTGTGGTAGGGTATACAGAGGAGAGACAATACTATAGACTGTTAAAAAACACTCTTTCTTTGTGTTGCTCCTGCAATGGTGAATCCTTTGTTAGCGTTAGGCTGTAGAGGATCTCCATCACTTGTTGTGGGGTTGTCATTTTGCACAGTCTCTCTGGATTCGAAGGATGAGCTCGTTTGGTTTATGTTGGGCTTGGAATAGAGATTGAGGAGGTGTTTTTGAGGTCGCCTATTTGGGAGATGGGCAAAGTGTTATGGCATGCTGGTTTCTTTGCAATTCTGAGAGAAACAATAGGATTGTTAAAGACGTGGAGAGGCTGTGGCTGAGGTGTGGGAGATGGCAAAGTTTAATGCTTCCTTATGAGTATCGGTCACTGTACCTTTTTGTAACTATGATTTTGGTCTGATTTTCTTGGATTGGAGTCCTTTTCTTAGTTATTGGACTCTGTTTCTGTGTTGGGCTTAGTTTAGTTTAGTTTTGCTTTTGGTTTTGTTTTGTTTTTTTGTTATTTTCTTTCTTTAATGCCTTTGTATTTCTTTCCTTTTTCTTAATGAAAACGTCAGTGCAGAAAAGGAGTCTCTTTCAGACATAATTGATAGGCTGGACAGATTAGAGGAGCCAGTGCCTATGAATGTGGACATATTTAAATAGTTATTTGTGCCTAATGTTATATCATTTGCATAACATTTAACGATATATAATTTTACTTTTCTTTTCATAAATGCCATAGGTGCTAAACAGGCTTCTATTTCTTGTCTTAATGCCTTCTCATTGTCATAATCTTGGTCCATTGGGCTAGTTCTTAATATGTTTGAAGTATGTGACATAACGCCATCTTCTAAAATGATTTTTTTTCCTGCTTTAATCATTACTCTCAGTAACAATATGAGTGGAAGCCCTCAATGGGACGGTCGGCTCATGGATTCTTTGAAAAACTTTGATCTTAGCAGCCCTGAAGTTAAGCAGCAATTTGGTTAGTCAAGTCGATCTCTTTTGATTTTGTACATTTTGTCAATAGTTGTTTTCGTGGGTGTTAAATGGCTTGATTACTATTATCTGGTTGGGATTTGCTATGACATCATATATTTCATATACAGCTGAATTGATGATATATGTGATTTTCTGTGCACGTTGCAATCGTATATGTTCACCCACTCTTAAAAAATATGACCAACATTTTGTTTTTGTTTTTGTTTTCCCTGTCAAAATAATTGATGAGCTCGGAAGTCTGTAAATTTTGATTCAGTTTTGGTTTTCTGATGATTATGTCAGTTTCTCTTTTTCCTGAAATTGTTTTAAATATATTTTTTGAAATTGAGTTTCAAAATTGCGATTCATGAATTCTCAGAATTAATAAAATATCATTTAGTATATCTATATGGTTTCGTGAGTTACTTGGTGCCTGTTTAGAAATGAGATTTTAAAACAATTTTTCTGTTTTTAGGAATAAAAACTGTTTTCTTTTTTCATGTTTTCTGTGATGTTTTCTCAATTAATTATTCATTTATATAAATATTAAGGCTTACCATATTTCTGGACCTTGACAGATCAAATTGGGCTTACACCTGAAGAGGTTATTTCAAAAATTATGGCCAATCCCGAAATTGCAATGGCATTTCAAAATCCAAGAGTTCAAGCAGCCATCATGGATGTATGTTCTACTTAAGGTTAATAAATTTTTGGTTCAAATCTAACATTTCAATTTGACCTTTTGCAGTGTTCGCAAAATCCACTGAGTATAACAAAGTATCAAAATGACAAAGAGGTACGTTAAATCAATATTGTTCTTGTACTTCCATCTATCACTCGGTTTATATAGAATTCAAATGAAGTTGTTACCATAAATTCAGAATTTCACTTTACTGATTCTGGTGAAAGGCTTCTTTTGGCAGATTGTTAGTATATATTTTATGTAGTTAACTTGTTCATTCTCAACTTCACTTATGTCTTTCTAGTTTCATTCACGTCGCTTCTATTTAACAATAATGAATTGTATAGTTCTGTTGGAACAGTCGGTTTCTGTTGTTGTAGTCTGTAGATCTATCGTTTAGCTGGTGTGCCGTCTTTTTAGCTTCATGTTTCATACGTGCATATGCCTTCTTATTCAATTCCTGCTGACTAGAGTTCCATCGATTAAACAAAATAAAAACAGTACTTTCATTTCATTCCATTGCCAATTCTAAGCATATCTCAAAGCATATGTTCCTGACGAAGAGGTCAAAGATTCGAATTTCCACTGTCCATTGTAAAAAAAAAAAAAAAACCCTTTACCATCTGTGCTTCCACACGTGCAGTAGATTGTTTCATTTGTCTGTTAAATGCTTGACGTAATATTTTTGGACTTATATGTCTTATCCTTTTATATGAGCATGGATTTCCATTTCCTTATTTCTTTTGAAAGTAATAGTATGATAGCAAAATACTCTCATTTCATTTTGTTGTCAAATCTAAGCATATCTCAATTGCTTAAGGCATATGTTCCTGACCATGAGGTTATAAATTTGAATCTCCACTGTGGTGTTGAACTCCTTAAAAAGAAAACCAGAAATCTTTATATTCTATTCCTCCACACGTGTAGTAGATTATTTCATTTGTCTTTATTTGATGTTTGACATAATATTTTTGGACTTATATTTCTTATCCTTTTGCATTGCCTTATTTCTTTAGAAAGTAAATCACACTCTCTCATTTCTTTTATTTATTTATTTATTTCTTTATTATCCCTTTAGGTCATGGACGTTTTCAATAAGATATCAGAACTATTCCCGGGAGTTTCTGGAGCACCATGA

mRNA sequence

ATGGACAGGCTCAATTTAGCCCTAACATCTCCTCCCAAGTTTGTTTTTCTCACATATTCTTCTACTTCTTCTATCTCCACTCCCACCAGAACCAATCAATTATGTGGAAGCAGGCGCTTGGCAAGCTCCAGGATTAAGTCTCCTCCCAGAATTTTTGCTTCTGCTGTTAATCGTCGACCCAACCACCGTATCCTCGTGACTGAACGGTTTGCAACGGTTTCTTCTTCGACTACCAGCAATGATTCGTCTTCTGTTGGTGTTCCATCAGTATCTATTCCTCCTCCCTCCTCATATGTAGGGTCGCCTCTCTTTTGGGTTGGTGTTGGTGTTGGGCTTTCAGCATTATTTACATGGAAATATGCAATGCAACAAGCTTTCAAGACGATGATGTCTCAAATGAATTCTCAAAACAGCCCAATGAGTAATCCTACTCTGTCGTCTGGATCACCTTTTCCAATACCTCCGACATTTGCAACTGGCACAACAGTTTCTCCATCTGTTTCTGAACCTGCTGCGTCAATTGATGTAACTGCAACAAAAGTTGAAGACGAACCAGTTATTAATGTCAAAAGTGGGACAGAGAACATGGAAGCAAAGAAGTTTGCTTTTGTAGACGTTTCTCCTGAAGAAACTGACCAAAAGAGTCCATTCAAGGAAGATGCCACAGACACAGATGTTTCAAAGAGTGCTCAGCCGACTGAGGAACTTCCATTGAATGGAGCTGCTTCTAAGCAGGCGTTTAATGCTTCAGATGGATCACAATTCAGTCGAAAACCTGGCTCAGTCTTATCAGTGGAAGCCGTGGAGAAAATGATGGAAGATCCGACAGTACAGAAGATGATATATCCTAACAATATGAGTGGAAGCCCTCAATGGGACGGTCGGCTCATGGATTCTTTGAAAAACTTTGATCTTAGCAGCCCTGAAGTTAAGCAGCAATTTGATCAAATTGGGCTTACACCTGAAGAGGTTATTTCAAAAATTATGGCCAATCCCGAAATTGCAATGGCATTTCAAAATCCAAGAGTTCAAGCAGCCATCATGGATTGTTCGCAAAATCCACTGAGTATAACAAAGTATCAAAATGACAAAGAGGTCATGGACGTTTTCAATAAGATATCAGAACTATTCCCGGGAGTTTCTGGAGCACCATGA

Coding sequence (CDS)

ATGGACAGGCTCAATTTAGCCCTAACATCTCCTCCCAAGTTTGTTTTTCTCACATATTCTTCTACTTCTTCTATCTCCACTCCCACCAGAACCAATCAATTATGTGGAAGCAGGCGCTTGGCAAGCTCCAGGATTAAGTCTCCTCCCAGAATTTTTGCTTCTGCTGTTAATCGTCGACCCAACCACCGTATCCTCGTGACTGAACGGTTTGCAACGGTTTCTTCTTCGACTACCAGCAATGATTCGTCTTCTGTTGGTGTTCCATCAGTATCTATTCCTCCTCCCTCCTCATATGTAGGGTCGCCTCTCTTTTGGGTTGGTGTTGGTGTTGGGCTTTCAGCATTATTTACATGGAAATATGCAATGCAACAAGCTTTCAAGACGATGATGTCTCAAATGAATTCTCAAAACAGCCCAATGAGTAATCCTACTCTGTCGTCTGGATCACCTTTTCCAATACCTCCGACATTTGCAACTGGCACAACAGTTTCTCCATCTGTTTCTGAACCTGCTGCGTCAATTGATGTAACTGCAACAAAAGTTGAAGACGAACCAGTTATTAATGTCAAAAGTGGGACAGAGAACATGGAAGCAAAGAAGTTTGCTTTTGTAGACGTTTCTCCTGAAGAAACTGACCAAAAGAGTCCATTCAAGGAAGATGCCACAGACACAGATGTTTCAAAGAGTGCTCAGCCGACTGAGGAACTTCCATTGAATGGAGCTGCTTCTAAGCAGGCGTTTAATGCTTCAGATGGATCACAATTCAGTCGAAAACCTGGCTCAGTCTTATCAGTGGAAGCCGTGGAGAAAATGATGGAAGATCCGACAGTACAGAAGATGATATATCCTAACAATATGAGTGGAAGCCCTCAATGGGACGGTCGGCTCATGGATTCTTTGAAAAACTTTGATCTTAGCAGCCCTGAAGTTAAGCAGCAATTTGATCAAATTGGGCTTACACCTGAAGAGGTTATTTCAAAAATTATGGCCAATCCCGAAATTGCAATGGCATTTCAAAATCCAAGAGTTCAAGCAGCCATCATGGATTGTTCGCAAAATCCACTGAGTATAACAAAGTATCAAAATGACAAAGAGGTCATGGACGTTTTCAATAAGATATCAGAACTATTCCCGGGAGTTTCTGGAGCACCATGA

Protein sequence

MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRPNHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASIDVTATKVEDEPVINVKSGTENMEAKKFAFVDVSPEETDQKSPFKEDATDTDVSKSAQPTEELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP

Homology

[Close]

BLAST of HG10009752 vs. NCBI nr
Match: XP_004148914.1 (protein TIC 40, chloroplastic [Cucumis sativus] >KAE8648338.1 hypothetical protein Csa_023106 [Cucumis sativus])

HSP 1 Score: 677.9 bits (1748), Expect = 5.0e-191
Identity = 366/419 (87.35%), Postives = 375/419 (89.50%), Query Frame = 0


Query: 1   MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRP 60
           MDRLNLALTSPPKF+FLTYSSTSSISTP+RTNQLC +RRL+SSRIKSPPRI ASA+NRRP
Sbjct: 1   MDRLNLALTSPPKFLFLTYSSTSSISTPSRTNQLCATRRLSSSRIKSPPRILASALNRRP 60

Query: 61  NHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTW-- 120
           NHRILV ERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTW  
Sbjct: 61  NHRILVAERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA 120

Query: 121 ----KYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASI 180
               KYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTT+SPSVSEPA SI
Sbjct: 121 SYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTISPSVSEPAVSI 180

Query: 181 DVTATKVEDEPVINVKSGTENMEAKKFAFVDVSPEETDQKSPFKEDATDTDVSKSAQPTE 240
           DVTATKVE+EPV NVKS TENMEAKKFAFVDVSPEETDQKSPFKEDATD DVSKSAQPT+
Sbjct: 181 DVTATKVEEEPVTNVKSRTENMEAKKFAFVDVSPEETDQKSPFKEDATDADVSKSAQPTQ 240

Query: 241 ELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYP----------- 300
           ELP NGAASKQA+N SDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYP           
Sbjct: 241 ELPQNGAASKQAYNGSDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET 300

Query: 301 ------------------NNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360
                             NNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI
Sbjct: 301 FKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360

Query: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 385
           SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP
Sbjct: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 419

[Close]

BLAST of HG10009752 vs. NCBI nr
Match: XP_008463124.1 (PREDICTED: protein TIC 40, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 674.1 bits (1738), Expect = 7.2e-190
Identity = 365/419 (87.11%), Postives = 374/419 (89.26%), Query Frame = 0


Query: 1   MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRP 60
           MDRLNLALTSPPKF+FLTYSS SSISTP+RTNQLC +RRL+SSRIKSPPRI ASA+NRRP
Sbjct: 1   MDRLNLALTSPPKFLFLTYSSASSISTPSRTNQLCATRRLSSSRIKSPPRILASALNRRP 60

Query: 61  NHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTW-- 120
           NHRILV ERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTW  
Sbjct: 61  NHRILVAERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA 120

Query: 121 ----KYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASI 180
               KYAMQQAFKTMMSQMNSQNSPMSNP LSSGSPFPIPPTFATGTTV+PSVSEPAASI
Sbjct: 121 SYLKKYAMQQAFKTMMSQMNSQNSPMSNPKLSSGSPFPIPPTFATGTTVTPSVSEPAASI 180

Query: 181 DVTATKVEDEPVINVKSGTENMEAKKFAFVDVSPEETDQKSPFKEDATDTDVSKSAQPTE 240
           DVTATKVE+EPV NVK+GTENMEAKKFAFVDVSPEETDQKSPFKEDATD DVSKSAQPTE
Sbjct: 181 DVTATKVEEEPVTNVKTGTENMEAKKFAFVDVSPEETDQKSPFKEDATDADVSKSAQPTE 240

Query: 241 ELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYP----------- 300
           ELP NGAASKQA+  SDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYP           
Sbjct: 241 ELPQNGAASKQAYIGSDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET 300

Query: 301 ------------------NNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360
                             NNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI
Sbjct: 301 FKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360

Query: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 385
           SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP
Sbjct: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 419

[Close]

BLAST of HG10009752 vs. NCBI nr
Match: XP_038877065.1 (protein TIC 40, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 667.5 bits (1721), Expect = 6.7e-188
Identity = 363/419 (86.63%), Postives = 372/419 (88.78%), Query Frame = 0


Query: 1   MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRP 60
           MDRLNLALTSPPK +FLTYSSTSSISTPTRT+QLCG+RR A+SRI  PPRIFASA+NRRP
Sbjct: 1   MDRLNLALTSPPKILFLTYSSTSSISTPTRTHQLCGTRRFATSRI--PPRIFASAINRRP 60

Query: 61  NHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTW-- 120
           NHRILV ERFA+VSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTW  
Sbjct: 61  NHRILVAERFASVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA 120

Query: 121 ----KYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASI 180
               KYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFP+PPTFATGTTVSPSVSEPAASI
Sbjct: 121 SYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPMPPTFATGTTVSPSVSEPAASI 180

Query: 181 DVTATKVEDEPVINVKSGTENMEAKKFAFVDVSPEETDQKSPFKEDATDTDVSKSAQPTE 240
           DVT TKVE+EPVINVKSGTEN EAKKFAFVDVSPEETDQ SPFKEDATD DVSKSAQPTE
Sbjct: 181 DVTVTKVEEEPVINVKSGTENTEAKKFAFVDVSPEETDQNSPFKEDATDADVSKSAQPTE 240

Query: 241 ELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYP----------- 300
           ELP NGAASKQAFN S+GSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYP           
Sbjct: 241 ELPQNGAASKQAFNGSEGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET 300

Query: 301 ------------------NNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360
                             NNMSGSPQWD RLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI
Sbjct: 301 FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360

Query: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 385
           SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP
Sbjct: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 417

[Close]

BLAST of HG10009752 vs. NCBI nr
Match: XP_008463125.1 (PREDICTED: protein TIC 40, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 664.8 bits (1714), Expect = 4.4e-187
Identity = 363/419 (86.63%), Postives = 372/419 (88.78%), Query Frame = 0


Query: 1   MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRP 60
           MDRLNLALTSPPKF+FLTYSS SSISTP+RTNQLC +RRL+SSRIKSPPRI ASA+NRRP
Sbjct: 1   MDRLNLALTSPPKFLFLTYSSASSISTPSRTNQLCATRRLSSSRIKSPPRILASALNRRP 60

Query: 61  NHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTW-- 120
           NHRILV ERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTW  
Sbjct: 61  NHRILVAERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA 120

Query: 121 ----KYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASI 180
               KYAMQQAFKTMMSQMNSQNSPMSNP LSSGSPFPIPPTFATGTTV+PSVSEPAASI
Sbjct: 121 SYLKKYAMQQAFKTMMSQMNSQNSPMSNPKLSSGSPFPIPPTFATGTTVTPSVSEPAASI 180

Query: 181 DVTATKVEDEPVINVKSGTENMEAKKFAFVDVSPEETDQKSPFKEDATDTDVSKSAQPTE 240
           DVTATKVE+EPV NVK+GTENMEAKKFAFVDVSPEETDQKSPFKEDATD DVSKSAQPTE
Sbjct: 181 DVTATKVEEEPVTNVKTGTENMEAKKFAFVDVSPEETDQKSPFKEDATDADVSKSAQPTE 240

Query: 241 ELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYP----------- 300
           E   NGAASKQA+  SDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYP           
Sbjct: 241 E---NGAASKQAYIGSDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET 300

Query: 301 ------------------NNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360
                             NNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI
Sbjct: 301 FKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360

Query: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 385
           SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP
Sbjct: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 416

[Close]

BLAST of HG10009752 vs. NCBI nr
Match: XP_038877066.1 (protein TIC 40, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 657.9 bits (1696), Expect = 5.3e-185
Identity = 361/419 (86.16%), Postives = 370/419 (88.31%), Query Frame = 0


Query: 1   MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRP 60
           MDRLNLALTSPPK +FLTYSSTSSISTPTRT+QLCG+RR A+SRI  PPRIFASA+NRRP
Sbjct: 1   MDRLNLALTSPPKILFLTYSSTSSISTPTRTHQLCGTRRFATSRI--PPRIFASAINRRP 60

Query: 61  NHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTW-- 120
           NHRILV ERFA+VSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTW  
Sbjct: 61  NHRILVAERFASVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA 120

Query: 121 ----KYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASI 180
               KYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFP+PPTFATGTTVSPSVSEPAASI
Sbjct: 121 SYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPMPPTFATGTTVSPSVSEPAASI 180

Query: 181 DVTATKVEDEPVINVKSGTENMEAKKFAFVDVSPEETDQKSPFKEDATDTDVSKSAQPTE 240
           DVT TKVE+EPVINVKSGTEN EAKKFAFVDVSPEETDQ SPFKEDATD DVSKSAQPTE
Sbjct: 181 DVTVTKVEEEPVINVKSGTENTEAKKFAFVDVSPEETDQNSPFKEDATDADVSKSAQPTE 240

Query: 241 ELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYP----------- 300
           E   NGAASKQAFN S+GSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYP           
Sbjct: 241 E---NGAASKQAFNGSEGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET 300

Query: 301 ------------------NNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360
                             NNMSGSPQWD RLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI
Sbjct: 301 FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360

Query: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 385
           SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP
Sbjct: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 414

[Close]

BLAST of HG10009752 vs. ExPASy Swiss-Prot
Match: Q8GT66 (Protein TIC 40, chloroplastic OS=Pisum sativum OX=3888 GN=TIC40 PE=1 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 1.4e-90
Identity = 219/439 (49.89%), Postives = 270/439 (61.50%), Query Frame = 0


Query: 1   MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFA-SAVNRR 60
           M+ LNLAL S PK + L +SS+ ++ +  ++      R  A+S      R  + S  N +
Sbjct: 1   MENLNLALVSSPKPLLLGHSSSKNVFSGRKSFTFGTFRVSANSSSSHVTRAASKSHQNLK 60

Query: 61  PNHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFT-- 120
                +    FA++SSS    +++SVGV     PPP S VGSPLFW+G+GVG SALF+  
Sbjct: 61  SVQGKVNAHDFASISSS-NGQETTSVGVSPQLSPPPPSTVGSPLFWIGIGVGFSALFSVV 120

Query: 121 ----WKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATG------------- 180
                KYAMQQAFK+MM QMN+QN+P  +   SSG PFP P   A+G             
Sbjct: 121 ASRVKKYAMQQAFKSMMGQMNTQNNPFDSGAFSSGPPFPFPMPSASGPATPAGFAGNQSQ 180

Query: 181 TTVSPSVSEPAASIDVTATKVE---DEPVINVKSGTE-NMEAKKFAFVDVSPEETDQKSP 240
            T + S S+   ++D+ ATKVE     P INVK   E   E KK AFVDVSPEET QK+ 
Sbjct: 181 ATSTRSASQSTVTVDIPATKVEAAAPAPDINVKEEVEVKNEPKKSAFVDVSPEETVQKNA 240

Query: 241 FK--EDATDTDVSKSAQPTEELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMED 300
           F+  +D  ++   K A+   E   NG   KQ F  S  S   RK  S LSV+A+EKMMED
Sbjct: 241 FERFKDVDESSSFKEARAPAEASQNGTPFKQGFGDSPSSPSERK--SALSVDALEKMMED 300

Query: 301 PTVQKMIYP-----------------------------NNMSGSPQWDGRLMDSLKNFDL 360
           PTVQ+M+YP                             NNM G  +WD R+MD+LKNFDL
Sbjct: 301 PTVQQMVYPYLPEEMRNPSTFKWMMQNPEYRQQLEAMLNNMGGGTEWDSRMMDTLKNFDL 360

Query: 361 SSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKE 385
           +SP+VKQQFDQIGL+P+EVISKIMANP++AMAFQNPRVQAAIMDCSQNP+SI KYQNDKE
Sbjct: 361 NSPDVKQQFDQIGLSPQEVISKIMANPDVAMAFQNPRVQAAIMDCSQNPMSIVKYQNDKE 420

[Close]

BLAST of HG10009752 vs. ExPASy Swiss-Prot
Match: Q9FMD5 (Protein TIC 40, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC40 PE=1 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 5.9e-86
Identity = 210/447 (46.98%), Postives = 275/447 (61.52%), Query Frame = 0


Query: 10  SPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRPNHR------ 69
           S PK + +  + TSS+  PT      G  R   + +    +I ASA ++ P+ R      
Sbjct: 12  SSPK-LLIGCNFTSSLKNPT------GFSRRTPNIVLRCSKISASAQSQSPSSRPENTGE 71

Query: 70  -ILVTER---FATVSSSTTSNDSSSVGVPSVSIPPP-SSYVGSPLFWVGVGVGLSALFTW 129
            ++V +R   FA++ SS+    ++SV  PSV +PPP SS +GSPLFW+GVGVGLSALF++
Sbjct: 72  IVVVKQRSKAFASIFSSSRDQQTTSVASPSVPVPPPSSSTIGSPLFWIGVGVGLSALFSY 131

Query: 130 ------KYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSE--- 189
                 KYAMQ A KTMM+QMN+QNS  +N    SGSPFP P    T    SP  S+   
Sbjct: 132 VTSNLKKYAMQTAMKTMMNQMNTQNSQFNNSGFPSGSPFPFPFPPQTSPASSPFQSQSQS 191

Query: 190 PAASIDVTATKVE-----------------DEPVINVKSGTENMEAKKFAFVDVSPEETD 249
             A++DVTATKVE                 D+P + +++  E  E K +AF D+SPEET 
Sbjct: 192 SGATVDVTATKVETPPSTKPKPTPAKDIEVDKPSVVLEASKEKKEEKNYAFEDISPEETT 251

Query: 250 QKSPFKE--DATDTDVSKSAQPTEEL------PLNGAASKQAFNASDGSQFSRKPGSVLS 309
           ++SPF    + ++T+  K  +  E++      P NGA + + F +  G     K G  LS
Sbjct: 252 KESPFSNYAEVSETNSPKETRLFEDVLQNGAGPANGATASEVFQSLGGG----KGGPGLS 311

Query: 310 VEAVEKMMEDPTVQKMIYP-----------------------------NNMSGSPQWDGR 369
           VEA+EKMMEDPTVQKM+YP                             NNMSGS +WD R
Sbjct: 312 VEALEKMMEDPTVQKMVYPYLPEEMRNPETFKWMLKNPQYRQQLQDMLNNMSGSGEWDKR 371

Query: 370 LMDSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIMDCSQNPL 383
           + D+LKNFDL+SPEVKQQF+QIGLTPEEVISKIM NP++AMAFQNPRVQAA+M+CS+NP+
Sbjct: 372 MTDTLKNFDLNSPEVKQQFNQIGLTPEEVISKIMENPDVAMAFQNPRVQAALMECSENPM 431

[Close]

BLAST of HG10009752 vs. ExPASy Swiss-Prot
Match: P50503 (Hsc70-interacting protein OS=Rattus norvegicus OX=10116 GN=St13 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.1e-06
Identity = 23/57 (40.35%), Postives = 41/57 (71.93%), Query Frame = 0


Query: 325 ISKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVS 382
           +++I+++PE+  A Q+P V  A  D +QNP +++KYQN+ +VM++ +K+S  F G S
Sbjct: 312 LNEILSDPEVLAAMQDPEVMVAFQDVAQNPSNMSKYQNNPKVMNLISKLSAKFGGHS 368

[Close]

BLAST of HG10009752 vs. ExPASy Swiss-Prot
Match: Q5ZLF0 (Hsc70-interacting protein OS=Gallus gallus OX=9031 GN=ST13 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 4.6e-06
Identity = 22/53 (41.51%), Postives = 38/53 (71.70%), Query Frame = 0


Query: 325 ISKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELF 378
           +++I+++PE+  A Q+P V AA  D +QNP +++KYQN+ +VM +  K+S  F
Sbjct: 305 LNEILSDPEVLAAMQDPEVMAAFQDVAQNPANMSKYQNNPKVMSLITKLSAKF 357

[Close]

BLAST of HG10009752 vs. ExPASy Swiss-Prot
Match: Q99L47 (Hsc70-interacting protein OS=Mus musculus OX=10090 GN=St13 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 6.0e-06
Identity = 22/57 (38.60%), Postives = 41/57 (71.93%), Query Frame = 0


Query: 325 ISKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVS 382
           +++I+++PE+  A Q+P V  A  D +QNP +++KYQ++ +VM++ +K+S  F G S
Sbjct: 315 LNEILSDPEVLAAMQDPEVMVAFQDVAQNPSNMSKYQSNPKVMNLISKLSAKFGGQS 371

[Close]

BLAST of HG10009752 vs. ExPASy TrEMBL
Match: A0A1S3CIG9 (protein TIC 40, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501349 PE=4 SV=1)

HSP 1 Score: 674.1 bits (1738), Expect = 3.5e-190
Identity = 365/419 (87.11%), Postives = 374/419 (89.26%), Query Frame = 0


Query: 1   MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRP 60
           MDRLNLALTSPPKF+FLTYSS SSISTP+RTNQLC +RRL+SSRIKSPPRI ASA+NRRP
Sbjct: 1   MDRLNLALTSPPKFLFLTYSSASSISTPSRTNQLCATRRLSSSRIKSPPRILASALNRRP 60

Query: 61  NHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTW-- 120
           NHRILV ERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTW  
Sbjct: 61  NHRILVAERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA 120

Query: 121 ----KYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASI 180
               KYAMQQAFKTMMSQMNSQNSPMSNP LSSGSPFPIPPTFATGTTV+PSVSEPAASI
Sbjct: 121 SYLKKYAMQQAFKTMMSQMNSQNSPMSNPKLSSGSPFPIPPTFATGTTVTPSVSEPAASI 180

Query: 181 DVTATKVEDEPVINVKSGTENMEAKKFAFVDVSPEETDQKSPFKEDATDTDVSKSAQPTE 240
           DVTATKVE+EPV NVK+GTENMEAKKFAFVDVSPEETDQKSPFKEDATD DVSKSAQPTE
Sbjct: 181 DVTATKVEEEPVTNVKTGTENMEAKKFAFVDVSPEETDQKSPFKEDATDADVSKSAQPTE 240

Query: 241 ELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYP----------- 300
           ELP NGAASKQA+  SDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYP           
Sbjct: 241 ELPQNGAASKQAYIGSDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET 300

Query: 301 ------------------NNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360
                             NNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI
Sbjct: 301 FKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360

Query: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 385
           SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP
Sbjct: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 419

[Close]

BLAST of HG10009752 vs. ExPASy TrEMBL
Match: A0A1S3CIH5 (protein TIC 40, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501349 PE=4 SV=1)

HSP 1 Score: 664.8 bits (1714), Expect = 2.1e-187
Identity = 363/419 (86.63%), Postives = 372/419 (88.78%), Query Frame = 0


Query: 1   MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRP 60
           MDRLNLALTSPPKF+FLTYSS SSISTP+RTNQLC +RRL+SSRIKSPPRI ASA+NRRP
Sbjct: 1   MDRLNLALTSPPKFLFLTYSSASSISTPSRTNQLCATRRLSSSRIKSPPRILASALNRRP 60

Query: 61  NHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTW-- 120
           NHRILV ERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTW  
Sbjct: 61  NHRILVAERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA 120

Query: 121 ----KYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASI 180
               KYAMQQAFKTMMSQMNSQNSPMSNP LSSGSPFPIPPTFATGTTV+PSVSEPAASI
Sbjct: 121 SYLKKYAMQQAFKTMMSQMNSQNSPMSNPKLSSGSPFPIPPTFATGTTVTPSVSEPAASI 180

Query: 181 DVTATKVEDEPVINVKSGTENMEAKKFAFVDVSPEETDQKSPFKEDATDTDVSKSAQPTE 240
           DVTATKVE+EPV NVK+GTENMEAKKFAFVDVSPEETDQKSPFKEDATD DVSKSAQPTE
Sbjct: 181 DVTATKVEEEPVTNVKTGTENMEAKKFAFVDVSPEETDQKSPFKEDATDADVSKSAQPTE 240

Query: 241 ELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYP----------- 300
           E   NGAASKQA+  SDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYP           
Sbjct: 241 E---NGAASKQAYIGSDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET 300

Query: 301 ------------------NNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360
                             NNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI
Sbjct: 301 FKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360

Query: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 385
           SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP
Sbjct: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 416

[Close]

BLAST of HG10009752 vs. ExPASy TrEMBL
Match: A0A6J1K0V5 (protein TIC 40, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489149 PE=4 SV=1)

HSP 1 Score: 636.0 bits (1639), Expect = 1.0e-178
Identity = 349/419 (83.29%), Postives = 359/419 (85.68%), Query Frame = 0


Query: 1   MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRP 60
           MDRLNLALTS PKFVFL YSSTSSISTPTRTNQLCGSRRLA SRIK PPRI ASAVNRR 
Sbjct: 1   MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRS 60

Query: 61  NHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTW-- 120
           NHRI+V ERFA+VSSSTTSN+SSSVGVPSVS+PPPSSYVGSPLFWVGVGVGLSALFTW  
Sbjct: 61  NHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVGSPLFWVGVGVGLSALFTWVA 120

Query: 121 ----KYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASI 180
               KYAMQQAFKTMMSQMNSQN+PMSN T   GSPFP+PPTFATGT VSPSVSE AASI
Sbjct: 121 SYLKKYAMQQAFKTMMSQMNSQNTPMSNSTQPFGSPFPVPPTFATGTAVSPSVSETAASI 180

Query: 181 DVTATKVEDEPVINVKSGTENMEAKKFAFVDVSPEETDQKSPFKEDATDTDVSKSAQPTE 240
           DVTATKVEDEPV NVKS TENMEAKKFAFVDVSPEETDQKSPFKE+ATDTDVSKSAQ   
Sbjct: 181 DVTATKVEDEPVTNVKSETENMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQLPV 240

Query: 241 ELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYP----------- 300
           E P NGAASKQAFN S+GSQFSRK G  LSVEAVEKMMEDPTVQKMIYP           
Sbjct: 241 EFPQNGAASKQAFNGSEGSQFSRKSGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET 300

Query: 301 ------------------NNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360
                             NNMSGSPQWD RLMDSLKNFDLSSPEVKQQFDQIG+TPEEVI
Sbjct: 301 FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVI 360

Query: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 385
           SK+MANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP
Sbjct: 361 SKMMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 419

[Close]

BLAST of HG10009752 vs. ExPASy TrEMBL
Match: A0A6J1FIY5 (protein TIC 40, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444690 PE=4 SV=1)

HSP 1 Score: 632.1 bits (1629), Expect = 1.5e-177
Identity = 346/419 (82.58%), Postives = 357/419 (85.20%), Query Frame = 0


Query: 1   MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRP 60
           MDRLNLALTS PKFVFL YSSTSSISTPTRTNQLCGSRRLA SRIK PPRI ASA NRR 
Sbjct: 1   MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAANRRS 60

Query: 61  NHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTW-- 120
           NHRI+V ERFA+VSSSTTSN+SSSVGVPSVS+PPPSSYVGSPLFWVGVGVGLSALFTW  
Sbjct: 61  NHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVGSPLFWVGVGVGLSALFTWVA 120

Query: 121 ----KYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASI 180
               KYAMQQAFKTMMSQMNSQN+ MSN T   GSPF +PPTFATGT VSPSVSE AASI
Sbjct: 121 SYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSETAASI 180

Query: 181 DVTATKVEDEPVINVKSGTENMEAKKFAFVDVSPEETDQKSPFKEDATDTDVSKSAQPTE 240
           DVTATKVEDEPV NVK  TENMEAKKFAFVDVSPEETDQKSPFKE+ATDTDVSKSAQP+ 
Sbjct: 181 DVTATKVEDEPVTNVKRETENMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQPSV 240

Query: 241 ELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYP----------- 300
           E P NGAASKQAFN S+GSQFSRKPG  LSVEAVEKMMEDPTVQKMIYP           
Sbjct: 241 EFPQNGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET 300

Query: 301 ------------------NNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360
                             NNMSGSPQWD RLMDSLKNFDLSSPEVKQQFDQIG+TPEEVI
Sbjct: 301 FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVI 360

Query: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 385
           SK+MANPEIAMAFQNPRVQAAIMDCSQNPLSI KYQNDKEVMDVFNKISELFPGVSGAP
Sbjct: 361 SKMMANPEIAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKEVMDVFNKISELFPGVSGAP 419

[Close]

BLAST of HG10009752 vs. ExPASy TrEMBL
Match: A0A6J1JYZ5 (protein TIC 40, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489149 PE=4 SV=1)

HSP 1 Score: 629.4 bits (1622), Expect = 9.8e-177
Identity = 349/420 (83.10%), Postives = 360/420 (85.71%), Query Frame = 0


Query: 1   MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRP 60
           MDRLNLALTS PKFVFL YSSTSSISTPTRTNQLCGSRRLA SRIK PPRI ASAVNRR 
Sbjct: 1   MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRS 60

Query: 61  NHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTW-- 120
           NHRI+V ERFA+VSSSTTSN+SSSVGVPSVS+PPPSSYVGSPLFWVGVGVGLSALFTW  
Sbjct: 61  NHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVGSPLFWVGVGVGLSALFTWVA 120

Query: 121 ----KYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASI 180
               KYAMQQAFKTMMSQMNSQN+PMSN T   GSPFP+PPTFATGT VSPSVSE AASI
Sbjct: 121 SYLKKYAMQQAFKTMMSQMNSQNTPMSNSTQPFGSPFPVPPTFATGTAVSPSVSETAASI 180

Query: 181 DVTATKVEDEPVINVKSGTENMEAKKFAFVDVSPEETDQKSPFKEDATDTDVSKSAQPTE 240
           DVTATKVEDEPV NVKS TENMEAKKFAFVDVSPEETDQKSPFKE+ATDTDVSKSAQ   
Sbjct: 181 DVTATKVEDEPVTNVKSETENMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQ--- 240

Query: 241 ELPL-NGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYP---------- 300
            LP+ NGAASKQAFN S+GSQFSRK G  LSVEAVEKMMEDPTVQKMIYP          
Sbjct: 241 -LPVENGAASKQAFNGSEGSQFSRKSGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPE 300

Query: 301 -------------------NNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEV 360
                              NNMSGSPQWD RLMDSLKNFDLSSPEVKQQFDQIG+TPEEV
Sbjct: 301 TFKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEV 360

Query: 361 ISKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 385
           ISK+MANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP
Sbjct: 361 ISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 416

[Close]

BLAST of HG10009752 vs. TAIR 10
Match: AT5G16620.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 319.3 bits (817), Expect = 4.2e-87
Identity = 210/447 (46.98%), Postives = 275/447 (61.52%), Query Frame = 0


Query: 10  SPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRPNHR------ 69
           S PK + +  + TSS+  PT      G  R   + +    +I ASA ++ P+ R      
Sbjct: 12  SSPK-LLIGCNFTSSLKNPT------GFSRRTPNIVLRCSKISASAQSQSPSSRPENTGE 71

Query: 70  -ILVTER---FATVSSSTTSNDSSSVGVPSVSIPPP-SSYVGSPLFWVGVGVGLSALFTW 129
            ++V +R   FA++ SS+    ++SV  PSV +PPP SS +GSPLFW+GVGVGLSALF++
Sbjct: 72  IVVVKQRSKAFASIFSSSRDQQTTSVASPSVPVPPPSSSTIGSPLFWIGVGVGLSALFSY 131

Query: 130 ------KYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSE--- 189
                 KYAMQ A KTMM+QMN+QNS  +N    SGSPFP P    T    SP  S+   
Sbjct: 132 VTSNLKKYAMQTAMKTMMNQMNTQNSQFNNSGFPSGSPFPFPFPPQTSPASSPFQSQSQS 191

Query: 190 PAASIDVTATKVE-----------------DEPVINVKSGTENMEAKKFAFVDVSPEETD 249
             A++DVTATKVE                 D+P + +++  E  E K +AF D+SPEET 
Sbjct: 192 SGATVDVTATKVETPPSTKPKPTPAKDIEVDKPSVVLEASKEKKEEKNYAFEDISPEETT 251

Query: 250 QKSPFKE--DATDTDVSKSAQPTEEL------PLNGAASKQAFNASDGSQFSRKPGSVLS 309
           ++SPF    + ++T+  K  +  E++      P NGA + + F +  G     K G  LS
Sbjct: 252 KESPFSNYAEVSETNSPKETRLFEDVLQNGAGPANGATASEVFQSLGGG----KGGPGLS 311

Query: 310 VEAVEKMMEDPTVQKMIYP-----------------------------NNMSGSPQWDGR 369
           VEA+EKMMEDPTVQKM+YP                             NNMSGS +WD R
Sbjct: 312 VEALEKMMEDPTVQKMVYPYLPEEMRNPETFKWMLKNPQYRQQLQDMLNNMSGSGEWDKR 371

Query: 370 LMDSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIMDCSQNPL 383
           + D+LKNFDL+SPEVKQQF+QIGLTPEEVISKIM NP++AMAFQNPRVQAA+M+CS+NP+
Sbjct: 372 MTDTLKNFDLNSPEVKQQFNQIGLTPEEVISKIMENPDVAMAFQNPRVQAALMECSENPM 431

[Close]

BLAST of HG10009752 vs. TAIR 10
Match: AT4G22670.1 (HSP70-interacting protein 1 )

HSP 1 Score: 45.1 bits (105), Expect = 1.5e-04
Identity = 21/54 (38.89%), Postives = 33/54 (61.11%), Query Frame = 0


Query: 326 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPG 380
           SKI+ +PE+  AF +P V AA+ D  +NP ++ K+Q + +V  V  K+   F G
Sbjct: 386 SKILNDPELMTAFSDPEVMAALQDVMKNPANLAKHQANPKVAPVIAKMMGKFAG 439

The following BLAST results are available for this feature:

BLAST of HG10009752 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148914.1	5.0e-191	87.35	protein TIC 40, chloroplastic [Cucumis sativus] >KAE8648338.1 hypothetical prote...	[more]
XP_008463124.1	7.2e-190	87.11	PREDICTED: protein TIC 40, chloroplastic isoform X1 [Cucumis melo]	[more]
XP_038877065.1	6.7e-188	86.63	protein TIC 40, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_008463125.1	4.4e-187	86.63	PREDICTED: protein TIC 40, chloroplastic isoform X2 [Cucumis melo]	[more]
XP_038877066.1	5.3e-185	86.16	protein TIC 40, chloroplastic isoform X2 [Benincasa hispida]	[more]

BLAST of HG10009752 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GT66	1.4e-90	49.89	Protein TIC 40, chloroplastic OS=Pisum sativum OX=3888 GN=TIC40 PE=1 SV=1	[more]
Q9FMD5	5.9e-86	46.98	Protein TIC 40, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC40 PE=1 SV=1	[more]
P50503	2.1e-06	40.35	Hsc70-interacting protein OS=Rattus norvegicus OX=10116 GN=St13 PE=1 SV=1	[more]
Q5ZLF0	4.6e-06	41.51	Hsc70-interacting protein OS=Gallus gallus OX=9031 GN=ST13 PE=2 SV=1	[more]
Q99L47	6.0e-06	38.60	Hsc70-interacting protein OS=Mus musculus OX=10090 GN=St13 PE=1 SV=1	[more]

BLAST of HG10009752 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CIG9	3.5e-190	87.11	protein TIC 40, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501349...	[more]
A0A1S3CIH5	2.1e-187	86.63	protein TIC 40, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501349...	[more]
A0A6J1K0V5	1.0e-178	83.29	protein TIC 40, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1FIY5	1.5e-177	82.58	protein TIC 40, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1JYZ5	9.8e-177	83.10	protein TIC 40, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of HG10009752 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16620.1	4.2e-87	46.98	hydroxyproline-rich glycoprotein family protein	[more]
AT4G22670.1	1.5e-04	38.89	HSP70-interacting protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006636	Heat shock chaperonin-binding	SMART	SM00727	CBM	coord: 321..360 e-value: 7.7E-4 score: 28.8
IPR041243	STI1 domain	PFAM	PF17830	STI1	coord: 322..373 e-value: 6.8E-12 score: 45.2
None	No IPR available	GENE3D	1.10.260.100		coord: 321..382 e-value: 1.5E-23 score: 84.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..236
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..225
None	No IPR available	PANTHER	PTHR47296	PROTEIN TIC 40, CHLOROPLASTIC	coord: 284..383 coord: 1..283

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10009752.1	HG10009752.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane