HG10009709 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10009709
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Cytochrome b-c1 complex subunit Rieske, mitochondrial
Location	Chr06: 9115780 .. 9119311 (+)
RNA-Seq Expression	HG10009709
Synteny	HG10009709

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAGGATTGCAGCTCGAAGGCTCTCGTCACTCTCTTCTTCGCATTTCAAGCCCACTATTGCCTCTTCTTTGCCCGGTTCTCACAACATCATTGATTCCACTGATTCCGTCCCTTCCAATGATTTCAGATCCGGCGGATTCGTCAACACTTTCCCCATCGGACCTCACTTCCATCGCAATTCTAGAGGTTACACCTTGCTTCTTTGTTTTAAAATTCCTGCTCCTTGTCGATTCATTGCGTTTTTCTTAGGGTTTGTTTTATGCCTTTTTCGCTCTTTGAGAGCGCAAAATTCTGTATCTGGCTTGCAGTTTCTATTACCGCGTTTAATCGTAGAATGGGATCGATATTCATCTTTGTTGATCCACTGTTTGATCTCTTTTGATTATTTTGAATCGTGTTTTTTTGCATATTAGTTTCTCGTTTTGTAAATAATTTTAAAATGTGAAAGTTGTTTTCTGGTGCTTTCGGGGCATTTTAACGATATCATCTTCACCGAAACAATCGCTTCTTCTTTTTTCTTTTGTAAATCTTCCACCATTTCATTTCATACTTTTAAGTTTTAACTTTATTTTGTTCTTTTATGTTATATCCACTGGAGACTACGTGATATCATTCATATGCTATATTGCCGAGAATTATTCTTCTAGTGCAGAAGTTTTAGTGTGAATTAGTCAGTGGGATCATATCTTAGTTTAATTCCATATTTTATGTGCTTAGAAATTTTTGAATTGGTTCTTTGTAAAAGCTCACCAATATCAATATGGGATGTCGATTAGCAGATCAATTTTAATTTATATTTTCTGGCTTTTTGTTGGGTATAATTTGTTGTTGCCGAAAGAGTGTAGTTGTTATCTACGAAGTTTAAGCCACTGTCTTCCCCGTGTAGAGTGTTTCTGTTATTATTGGGAAGAATTTTGATCAATTGCTGGATTTGAATATACTATCAATAAAATTTGCTAACAGTACTTATATTTTTCTCTCAGAAATAGAAATGTTTCTGATAAATTAATTTAAGATATTGGATAAGAAGGTATGAGGGGATAATTAATCCTGTTACTTGTATGAAATAATGTAGTATTAGTATAAGATAAACAAAGTAGGCTATAATTACAATAGAACTTCTTTCTTATGCACCATAAAGAAGAAGTGATTGGGGAATTCCAGATGCGTTCATTCATAAGAATTTCTGTTTTCAGTATTCTTGTAACGTGCTTCAATTAGATGGTGACACATTTCAACTTTATTTACAAACTTTGTACAATCTGTTCTTTTTTTTTATTCTTTCCTTCCTTATATTTAAAGAAGGCTCATTCACTGCACAATTGCACAGAAAATACAGAACCCTATTTCTTTTCATTTTACATTCCTTTGAAATACTGATCTTAGACACCCCAAAGAAGATGTATTTGTACGTTGTTACAAAAGAACTCAAAAGTGTAGGAGTTATCTTCGTAGACCTTTCAATTTCTTTCCTTCCAGGTTTCCTAAACCAAAGCTCGAGTCACGCATCTACACAAAAATCTAGCTTTTCCTCTGAGGCTCCACCCATTTAAGACTTACAATTTCCACTCCAAAACTGACTCTGAAGTACACAGAATGTTTTTGAATACTGAGGCAAAAGGACACTGGAGGAATAGGTGCTCTGCTTTTTCTTCTTCCCTTAAGCACAAGCTGCAAACCAATGGAGAAAGGAAGACTTGTATCTTCTTTGGGACATTAAACTTCCAAATCATATCGACCATAGGGCTTATGAGATGTTTCAGTCAACTTTATGGAAGCAGATCTTGTTGAAGAAACCCCAGATTTCTCAAGGGACCAGCAAGCTCTGTCCATACCATCGCCTAGCCTTACAGTATCAATCAATTATATCAACGGATACAGCTTTCAAATTCTCTATCCAATATCCATTATACCTCTTCTAAAACCAAGATTCCAATCACGTTCTCCAAGATTCCAATCATTGTTCTCCAAGTCCCAACACTCTTCAATGATGGCATCTTTTTTATGTGATATTATAGAAGTAAGAAATCATGGAATGATTCCTCCAAGGAAGAGGATCCCACCCATTTGTCTCTCAAAAATTTAATTCCGCCCTTTTGGCCTTGAAGTTTTTGAATTTGAAGAAAAACACTATTTATTGCAATTTGGAATCAAGGTCTGCCTTTTGATACACCTTTTGGTAGAAGTAAAGTCCACCCTAAAGGCTCACACCCGTGAATACTAAAGATAATCCTTTTGTGAAATAGCTTCAAAGTTTCTGCTAAAAAAGATTGGATAACTTTAATCCTATTCCATGGGCCCTGAAGATAGTTTTATTCATACTCACATTGAAAATCCTTAAAATTTGCTCTAGAAATTAGGCATAGCAAGAACAATTACACAATGCTTACAATTCCACAATGCTTTTTTGTTATCTTGAGAATTGGTCTTCTGCCTCTTGTGATGGTTGGTTTGTATTGCTCTTGCAAAATTGACTGCCCATTATGGCTGAACATTTTGGTTCTGGATATTTATACAGATTCCTTCTGTATGCACAACTAATTTGTAAATACTCTATGCATGCACATGACTAGTTATGGAGTTCTGCTCCCTAGGTTTATACGAAAGTTGAGGATAGAAATATTGGTAAGAAATCAATTAGCACACTGGAAATGGTTTGGAGGCCTGCTTTTCTGATTGTGCATTTTATAAATATCTGATACTAATTGAAAAAAAAAGGCAATTATATGGTTACGGTTGGAATCTGTCTTTAACAATTACTTAAATCGTTTAGAGGCTGTGCATGAGCTTCTCAATTATAATTTGTGATTCATCACCTTATGCATGACTATTTGTTTCTGCTCTGGCGTGGTTTCATGATTATATGGAAATGACTTTCTGTTAGGTTTTGCTTCTGATGCATTGACCTCAACCAAGGATGATGGCTTAATTCTGGATATTCCTGCAACTGTAGCTGCCATTAAGAATCCTTCTTCAAAAATAGTCTATGATGACTACAATCATGAACGATTTCCTCCTGGTGACCCCAGCAAGCGTGCATTTGCTTATTTTGTATTATCAGGTGGTCGGTTTGTCTATGCTTCCTTGATTCGTCTCCTTGTTCTCAAGTTTGTCCTCAGCATGTCAGCCAGTAAGGATGTTCTTGCCCTGGCCTCACTTGAGGTTGACCTTTCAAGCATCGAACCTGGTTCTACCGTGACAGTTAAGTGGCGTGGAAAACCAGTATTCATCAGGCGACGAACTGAGGATGATATTAAGTTAGCAAATAGCGTCGACATTGGATCTCTTCGTGACCCACAGCAGGATGGCGAGAGAGTTAAGGATCCAGAATGGCTTATCGTGATCGGTGTCTGCACGCATCTTGGTTGCATTCCGTTGCCAAATGCTGGTGATTATGGTGGGTGGTTTTGTCCATGCCATGGTTCTCATTACGACGTCTCTGGCAGAATCCGTAAAGGGCCAGCACCCTACAATTTGGAGGTACCCACCTACACCTTTTTGGATGACAACAAGCTTTTGATCGGTTAA

mRNA sequence

ATGTTGAGGATTGCAGCTCGAAGGCTCTCGTCACTCTCTTCTTCGCATTTCAAGCCCACTATTGCCTCTTCTTTGCCCGGTTCTCACAACATCATTGATTCCACTGATTCCGTCCCTTCCAATGATTTCAGATCCGGCGGATTCGTCAACACTTTCCCCATCGGACCTCACTTCCATCGCAATTCTAGAGGTTTTGCTTCTGATGCATTGACCTCAACCAAGGATGATGGCTTAATTCTGGATATTCCTGCAACTGTAGCTGCCATTAAGAATCCTTCTTCAAAAATAGTCTATGATGACTACAATCATGAACGATTTCCTCCTGGTGACCCCAGCAAGCGTGCATTTGCTTATTTTGTATTATCAGGTGGTCGGTTTGTCTATGCTTCCTTGATTCGTCTCCTTGTTCTCAAGTTTGTCCTCAGCATGTCAGCCAGTAAGGATGTTCTTGCCCTGGCCTCACTTGAGGTTGACCTTTCAAGCATCGAACCTGGTTCTACCGTGACAGTTAAGTGGCGTGGAAAACCAGTATTCATCAGGCGACGAACTGAGGATGATATTAAGTTAGCAAATAGCGTCGACATTGGATCTCTTCGTGACCCACAGCAGGATGGCGAGAGAGTTAAGGATCCAGAATGGCTTATCGTGATCGGTGTCTGCACGCATCTTGGTTGCATTCCGTTGCCAAATGCTGGTGATTATGGTGGGTGGTTTTGTCCATGCCATGGTTCTCATTACGACGTCTCTGGCAGAATCCGTAAAGGGCCAGCACCCTACAATTTGGAGGTACCCACCTACACCTTTTTGGATGACAACAAGCTTTTGATCGGTTAA

Coding sequence (CDS)

ATGTTGAGGATTGCAGCTCGAAGGCTCTCGTCACTCTCTTCTTCGCATTTCAAGCCCACTATTGCCTCTTCTTTGCCCGGTTCTCACAACATCATTGATTCCACTGATTCCGTCCCTTCCAATGATTTCAGATCCGGCGGATTCGTCAACACTTTCCCCATCGGACCTCACTTCCATCGCAATTCTAGAGGTTTTGCTTCTGATGCATTGACCTCAACCAAGGATGATGGCTTAATTCTGGATATTCCTGCAACTGTAGCTGCCATTAAGAATCCTTCTTCAAAAATAGTCTATGATGACTACAATCATGAACGATTTCCTCCTGGTGACCCCAGCAAGCGTGCATTTGCTTATTTTGTATTATCAGGTGGTCGGTTTGTCTATGCTTCCTTGATTCGTCTCCTTGTTCTCAAGTTTGTCCTCAGCATGTCAGCCAGTAAGGATGTTCTTGCCCTGGCCTCACTTGAGGTTGACCTTTCAAGCATCGAACCTGGTTCTACCGTGACAGTTAAGTGGCGTGGAAAACCAGTATTCATCAGGCGACGAACTGAGGATGATATTAAGTTAGCAAATAGCGTCGACATTGGATCTCTTCGTGACCCACAGCAGGATGGCGAGAGAGTTAAGGATCCAGAATGGCTTATCGTGATCGGTGTCTGCACGCATCTTGGTTGCATTCCGTTGCCAAATGCTGGTGATTATGGTGGGTGGTTTTGTCCATGCCATGGTTCTCATTACGACGTCTCTGGCAGAATCCGTAAAGGGCCAGCACCCTACAATTTGGAGGTACCCACCTACACCTTTTTGGATGACAACAAGCTTTTGATCGGTTAA

Protein sequence

MLRIAARRLSSLSSSHFKPTIASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIGPHFHRNSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG

Homology

[Close]

BLAST of HG10009709 vs. NCBI nr
Match: XP_038874657.1 (cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 539.3 bits (1388), Expect = 2.0e-149
Identity = 264/277 (95.31%), Postives = 270/277 (97.47%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFKPTIASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIGPHFHR 60
           MLRIAARRLSSLSSS  +PTIASSLPGSH+IIDS+DS PSNDFRS GF NTFPI PHF R
Sbjct: 1   MLRIAARRLSSLSSSRLRPTIASSLPGSHSIIDSSDSAPSNDFRSAGFFNTFPIRPHFDR 60

Query: 61  NSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120
           NSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV
Sbjct: 61  NSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGWFCP 240
           RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWL+VIGVCTHLGCIPLPNAGDYGGWFCP
Sbjct: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLVVIGVCTHLGCIPLPNAGDYGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           CHGSHYD+SGRIRKGPAPYNLEVPTYTFLD+NKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 277

[Close]

BLAST of HG10009709 vs. NCBI nr
Match: XP_008465498.1 (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis melo])

HSP 1 Score: 526.2 bits (1354), Expect = 1.7e-145
Identity = 259/277 (93.50%), Postives = 266/277 (96.03%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFKPTIASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIGPHFHR 60
           MLRIAARRLSSLSSSHF+PTIASSLPGSHNIIDS D   SNDFRS GF NTFPI PHF R
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNIIDSAD---SNDFRSAGFFNTFPIRPHFDR 60

Query: 61  NSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120
           NSRGFASDAL STKDDGLI+DIPATVAA+KNPSSKIVYDDYNHERFPPGDPSKRAFAYFV
Sbjct: 61  NSRGFASDALASTKDDGLIMDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGWFCP 240
           RRTEDDIKLANSVDIGSLRDPQQD ERVKDPEWL+V+GVCTHLGCIPLPNAGDYGGWFCP
Sbjct: 181 RRTEDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           CHGSHYDVSGRIRKGPAPYNLEVPTY+FL+ NKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

[Close]

BLAST of HG10009709 vs. NCBI nr
Match: XP_008465508.1 (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis melo])

HSP 1 Score: 523.1 bits (1346), Expect = 1.5e-144
Identity = 255/277 (92.06%), Postives = 268/277 (96.75%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFKPTIASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIGPHFHR 60
           MLRIAARRLSSLSSSHF+PTIASSLPGSHNIIDSTD   SNDFRSGGF NTFPIGPHF R
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNIIDSTD---SNDFRSGGFFNTFPIGPHFDR 60

Query: 61  NSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120
           NSRGFASDAL+S K+  L+ D+PATVAA+KNP+SKIVYD+YNHERFPPGDPSKRAFAYFV
Sbjct: 61  NSRGFASDALSSMKETNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGWFCP 240
           RRTE+DIKLANSVDIG+LRDPQQDGERVKDPEWLIV+GVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           CHGSHYDVSGRIRKGPAPYNLEVPTYTFL+DNKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of HG10009709 vs. NCBI nr
Match: XP_023550036.1 (cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 521.9 bits (1343), Expect = 3.3e-144
Identity = 256/277 (92.42%), Postives = 265/277 (95.67%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFKPTIASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIGPHFHR 60
           MLRIAARR SSLSSSHF+PTI+SS PGSH I+DS D   SNDFRSGGF NTFP GPHF R
Sbjct: 1   MLRIAARRFSSLSSSHFRPTISSSFPGSHKIVDSGD---SNDFRSGGFFNTFPSGPHFGR 60

Query: 61  NSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120
           N RGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYD+YNHERFPPGDPSKRAFAYFV
Sbjct: 61  NCRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDEYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGWFCP 240
           RRTEDDIK+ANSVDIGSLRDPQQD ERVK+PEWLIV+GVCTHLGCIPLPNAGDYGGWFCP
Sbjct: 181 RRTEDDIKVANSVDIGSLRDPQQDEERVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           CHGSHYD+SGRIRKGPAPYNLEVPTYTFLD+NKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 274

[Close]

BLAST of HG10009709 vs. NCBI nr
Match: XP_022992735.1 (cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 521.2 bits (1341), Expect = 5.6e-144
Identity = 257/277 (92.78%), Postives = 265/277 (95.67%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFKPTIASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIGPHFHR 60
           MLRIAARR SSLSSSHF+PTIASSLPGSH I+DS D   SNDFRSGGF NTFP GPHF R
Sbjct: 1   MLRIAARRFSSLSSSHFRPTIASSLPGSHKIVDSGD---SNDFRSGGFFNTFPSGPHFDR 60

Query: 61  NSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120
           + RGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYD+YNHERFPPGDPSKRAFAYFV
Sbjct: 61  SCRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDEYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGWFCP 240
           RRTEDDIKLANSVDI SLRDPQQD ERVK+PEWLIV+GVCTHLGCIPLPNAGDYGGWFCP
Sbjct: 181 RRTEDDIKLANSVDIESLRDPQQDEERVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           CHGSHYD+SGRIRKGPAPYNLEVPTYTFLD+NKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 274

[Close]

BLAST of HG10009709 vs. ExPASy Swiss-Prot
Match: P51132 (Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 7.0e-113
Identity = 204/277 (73.65%), Postives = 234/277 (84.48%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFKPTIASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIGPHFHR 60
           MLRIA RR SSLS    +  + S  P S   I S +   S+D  S     +  +   F  
Sbjct: 1   MLRIAGRRASSLS----RWPVRSVAPSSSAFI-SANHFSSDDDSSSPRSISPSLASVFLH 60

Query: 61  NSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120
           ++RGF+S++++   D GL+ D+P TVAAIKNP+SKIVYD++NHER+PPGDPSKRAFAYFV
Sbjct: 61  HTRGFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           L+GGRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIR
Sbjct: 121 LTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGWFCP 240
           RRTEDDI LANSVD+GSLRDPQQD ERVK PEWL+VIGVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           CHGSHYD+SGRIRKGPAPYNLEVPTY+FL++NKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

[Close]

BLAST of HG10009709 vs. ExPASy Swiss-Prot
Match: P51133 (Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 3.8e-111
Identity = 203/277 (73.29%), Postives = 233/277 (84.12%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFKPTIASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIGPHFHR 60
           MLRIA R+LSS ++     T +SS   + N    TD   S+  RS    +   +   F  
Sbjct: 1   MLRIAGRKLSSSAA-----TRSSSAFFTRNPFTFTDD-SSSPARS---PSPASLASQFLD 60

Query: 61  NSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120
             RGF+S++++     GL+ D+PATVAAIKNPSSKIVYDD NHER+PPGDPSKRAFAYFV
Sbjct: 61  QFRGFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           L+GGRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIR
Sbjct: 121 LTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGWFCP 240
           RRTE+DI LANSVD+GSLRDPQQD ERVK+PEWL+VIGVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTEEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           CHGSHYD+SGRIRKGPAPYNLEVPTY+F+++NKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268

[Close]

BLAST of HG10009709 vs. ExPASy Swiss-Prot
Match: P51135 (Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 1.4e-110
Identity = 201/277 (72.56%), Postives = 233/277 (84.12%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFKPTIASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIGPHFHR 60
           MLRIA R+LSS +++      +SS   + N    TD   S+  RS    +   +   F  
Sbjct: 1   MLRIAGRKLSSSAAAR-----SSSAFFTRNPFTFTDD-SSSPTRS---PSPTSLASQFLD 60

Query: 61  NSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120
             RGF+S++++     GL+ D+PATVAAIKNPSSKIVYDD NHER+PPGDPSKRAFAYFV
Sbjct: 61  QFRGFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           L+GGRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIR
Sbjct: 121 LTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGWFCP 240
           RRT++DI LANSVD+GSLRDPQQD ERVK+PEWL+VIGVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTDEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           CHGSHYD+SGRIRKGPAPYNLEVPTY+F+++NKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268

[Close]

BLAST of HG10009709 vs. ExPASy Swiss-Prot
Match: P49729 (Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 4.2e-110
Identity = 193/257 (75.10%), Postives = 224/257 (87.16%), Query Frame = 0


Query: 21  IASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIGPHFHRNSRGFASDALTSTKDDGLIL 80
           + S+ P S   I S +   S+D  S     +  +   F  ++RGF+S++++   D GL+ 
Sbjct: 3   VRSAAPSSSAFI-SANHFSSDDDSSSPRSISPSLASVFLHHTRGFSSNSVSPAHDMGLVP 62

Query: 81  DIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFV 140
           D+P TVAAIKNP+SKIVYD++NHER+PPGDPSKRAFAYFVL+GGRFVYASL+RLL+LKFV
Sbjct: 63  DLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLMRLLILKFV 122

Query: 141 LSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLANSVDIGSLRD 200
           LSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRTEDDI LANSVD+GSLRD
Sbjct: 123 LSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDISLANSVDLGSLRD 182

Query: 201 PQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDVSGRIRKGPAPYN 260
           PQQD ERVK+PEWL+VIGVCTHLGCIPLPNAGD+GGWFCPCHGSHYD+SGRIRKGPAPYN
Sbjct: 183 PQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYN 242

Query: 261 LEVPTYTFLDDNKLLIG 278
           LEVPTY+FL++NKLLIG
Sbjct: 243 LEVPTYSFLEENKLLIG 258

[Close]

BLAST of HG10009709 vs. ExPASy Swiss-Prot
Match: P37841 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum OX=4113 GN=FES1 PE=1 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 4.2e-110
Identity = 200/277 (72.20%), Postives = 229/277 (82.67%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFKPTIASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIGPHFHR 60
           MLR+A RRLSS ++         S   S  + D  DS P+          +  +   F  
Sbjct: 1   MLRVAGRRLSSSAARSSSTFFTRS---SFTVTD--DSSPARS-------PSPSLTSSFLD 60

Query: 61  NSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120
             RGF+S++++     GL+ D+PATVAAIKNPSSKIVYDD NHER+PPGDPSKRAFAYFV
Sbjct: 61  QIRGFSSNSVSPAHQLGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           L+GGRFVYAS +RLL+LKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR
Sbjct: 121 LTGGRFVYASSVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGWFCP 240
           RRT+DDIKLANSVD+G+LRDPQQD ERVK+PEWL+V+GVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTDDDIKLANSVDLGTLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           CHGSHYD+SGRIRKGPAPYNLEVPTY+FL++NKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 265

[Close]

BLAST of HG10009709 vs. ExPASy TrEMBL
Match: A0A1S3CPE6 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103503117 PE=3 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 8.4e-146
Identity = 259/277 (93.50%), Postives = 266/277 (96.03%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFKPTIASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIGPHFHR 60
           MLRIAARRLSSLSSSHF+PTIASSLPGSHNIIDS D   SNDFRS GF NTFPI PHF R
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNIIDSAD---SNDFRSAGFFNTFPIRPHFDR 60

Query: 61  NSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120
           NSRGFASDAL STKDDGLI+DIPATVAA+KNPSSKIVYDDYNHERFPPGDPSKRAFAYFV
Sbjct: 61  NSRGFASDALASTKDDGLIMDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGWFCP 240
           RRTEDDIKLANSVDIGSLRDPQQD ERVKDPEWL+V+GVCTHLGCIPLPNAGDYGGWFCP
Sbjct: 181 RRTEDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           CHGSHYDVSGRIRKGPAPYNLEVPTY+FL+ NKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

[Close]

BLAST of HG10009709 vs. ExPASy TrEMBL
Match: A0A1S3CP16 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103503125 PE=3 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 7.1e-145
Identity = 255/277 (92.06%), Postives = 268/277 (96.75%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFKPTIASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIGPHFHR 60
           MLRIAARRLSSLSSSHF+PTIASSLPGSHNIIDSTD   SNDFRSGGF NTFPIGPHF R
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNIIDSTD---SNDFRSGGFFNTFPIGPHFDR 60

Query: 61  NSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120
           NSRGFASDAL+S K+  L+ D+PATVAA+KNP+SKIVYD+YNHERFPPGDPSKRAFAYFV
Sbjct: 61  NSRGFASDALSSMKETNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGWFCP 240
           RRTE+DIKLANSVDIG+LRDPQQDGERVKDPEWLIV+GVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           CHGSHYDVSGRIRKGPAPYNLEVPTYTFL+DNKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of HG10009709 vs. ExPASy TrEMBL
Match: A0A6J1JWJ5 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111488984 PE=3 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 2.7e-144
Identity = 257/277 (92.78%), Postives = 265/277 (95.67%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFKPTIASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIGPHFHR 60
           MLRIAARR SSLSSSHF+PTIASSLPGSH I+DS D   SNDFRSGGF NTFP GPHF R
Sbjct: 1   MLRIAARRFSSLSSSHFRPTIASSLPGSHKIVDSGD---SNDFRSGGFFNTFPSGPHFDR 60

Query: 61  NSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120
           + RGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYD+YNHERFPPGDPSKRAFAYFV
Sbjct: 61  SCRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDEYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGWFCP 240
           RRTEDDIKLANSVDI SLRDPQQD ERVK+PEWLIV+GVCTHLGCIPLPNAGDYGGWFCP
Sbjct: 181 RRTEDDIKLANSVDIESLRDPQQDEERVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           CHGSHYD+SGRIRKGPAPYNLEVPTYTFLD+NKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 274

[Close]

BLAST of HG10009709 vs. ExPASy TrEMBL
Match: A0A6J1FL42 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111444975 PE=3 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 3.9e-143
Identity = 256/277 (92.42%), Postives = 263/277 (94.95%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFKPTIASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIGPHFHR 60
           MLRIAARR SSLSSSHF+PTIASSLPGSH I DS D   SNDFRSGGF NTFP GPHF R
Sbjct: 1   MLRIAARRFSSLSSSHFRPTIASSLPGSHKIADSGD---SNDFRSGGFFNTFPSGPHFDR 60

Query: 61  NSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120
           + RGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYD+YNHERFPPGDPSKRAFAYFV
Sbjct: 61  SCRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDEYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGWFCP 240
           RRTEDDIK ANSVDI SLRDPQQD ERVK+PEWLIV+GVCTHLGCIPLPNAGDYGGWFCP
Sbjct: 181 RRTEDDIKSANSVDIESLRDPQQDEERVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           CHGSHYD+SGRIRKGPAPYNLEVPTYTFLD+NKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 274

[Close]

BLAST of HG10009709 vs. ExPASy TrEMBL
Match: A0A0A0KTT3 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_5G464800 PE=3 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 5.1e-143
Identity = 256/277 (92.42%), Postives = 263/277 (94.95%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFKPTIASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIGPHFHR 60
           MLRIAARRLSSLSSSHF+PTIASS P SHNIIDSTD   SNDFRS GF NTFPI   F R
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTD---SNDFRSAGFFNTFPIRSQFDR 60

Query: 61  NSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120
           +SRGFASDAL STKDDGLILDIPATVAA+KNPSSKIVYDDYNHERFPPGDPSKRAFAYFV
Sbjct: 61  HSRGFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDYGGWFCP 240
           RRTEDDIKLANSVDIGSLRDPQQD ERVKDPEWL+V+GVCTHLGCIPLPNAGDYGGWFCP
Sbjct: 181 RRTEDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           CHGSHYDVSGRIRKGPAPYNLEVPTY+FL+ NKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

[Close]

BLAST of HG10009709 vs. TAIR 10
Match: AT5G13440.1 (Ubiquinol-cytochrome C reductase iron-sulfur subunit )

HSP 1 Score: 396.0 bits (1016), Expect = 2.5e-110
Identity = 199/283 (70.32%), Postives = 230/283 (81.27%), Query Frame = 0


Query: 1   MLRIAARRLSSLS-----SSHFKPTIASSLPGSHNIIDSTDSVPSNDFRSGGFVNTFPIG 60
           MLR+A RRL S+S     ++ F  +   +L    N   ++ SVPS D  S          
Sbjct: 1   MLRVAGRRLFSVSQRSSTATSFVLSRDHTLSDGGNSSSASRSVPSADLSSFN-------- 60

Query: 61  PHFHRN-SRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKR 120
             +HR+  RGFAS  +T   + G   ++PATV A+K P+SKIVYDD+NHER+PPGDPSKR
Sbjct: 61  -SYHRSVIRGFASQVITQGNEIGFGSEVPATVEAVKTPNSKIVYDDHNHERYPPGDPSKR 120

Query: 121 AFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRG 180
           AFAYFVLSGGRFVYAS++RLLVLK ++SMSASKDVLALASLEVDL SIEPG+TVTVKWRG
Sbjct: 121 AFAYFVLSGGRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRG 180

Query: 181 KPVFIRRRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDY 240
           KPVFIRRRTEDDIKLANSVD+GSLRDPQ+D  RVK+PEWLIV+GVCTHLGCIPLPNAGDY
Sbjct: 181 KPVFIRRRTEDDIKLANSVDVGSLRDPQEDSVRVKNPEWLIVVGVCTHLGCIPLPNAGDY 240

Query: 241 GGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           GGWFCPCHGSHYD+SGRIRKGPAPYNLEVPTY+FL++NKLLIG
Sbjct: 241 GGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 274

[Close]

BLAST of HG10009709 vs. TAIR 10
Match: AT5G13430.1 (Ubiquinol-cytochrome C reductase iron-sulfur subunit )

HSP 1 Score: 390.2 bits (1001), Expect = 1.4e-108
Identity = 196/285 (68.77%), Postives = 227/285 (79.65%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFKPTIASSLPGSHNIID-------STDSVPSNDFRSGGFVNTFP 60
           MLR+A RRL S+S      T +  +   H + D       +  S+PS D  S        
Sbjct: 1   MLRVAGRRLFSVSQRSSTAT-SFVVSRDHTLSDGGGDSSSAPRSLPSADLSS-------- 60

Query: 61  IGPHFHRN-SRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPS 120
               +HR+  RGF+S  L    + G   ++PATV A+K P+SKIVYDD+NHER+PPGDPS
Sbjct: 61  ----YHRSLIRGFSSQVLAQGNEIGFGSEVPATVEAVKTPNSKIVYDDHNHERYPPGDPS 120

Query: 121 KRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKW 180
           KRAFAYFVLSGGRFVYAS++RLLVLK ++SMSASKDVLALASLEVDL SIEPG+TVTVKW
Sbjct: 121 KRAFAYFVLSGGRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKW 180

Query: 181 RGKPVFIRRRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAG 240
           RGKPVFIRRRTEDDIKLANSVD+GSLRDPQ+D  RVK+PEWL+V+GVCTHLGCIPLPNAG
Sbjct: 181 RGKPVFIRRRTEDDIKLANSVDVGSLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAG 240

Query: 241 DYGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLDDNKLLIG 278
           DYGGWFCPCHGSHYD+SGRIRKGPAPYNLEVPTY+FL++NKLLIG
Sbjct: 241 DYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

[Close]

BLAST of HG10009709 vs. TAIR 10
Match: AT4G03280.1 (photosynthetic electron transfer C )

HSP 1 Score: 54.7 bits (130), Expect = 1.4e-07
Identity = 22/43 (51.16%), Postives = 29/43 (67.44%), Query Frame = 0


Query: 219 VCTHLGCIPLPNAGDYGGWFCPCHGSHYDVSGRIRKGPAPYNL 262
           VCTHLGC+   N  +   + CPCHGS Y+  GR+ +GPAP +L
Sbjct: 156 VCTHLGCVVPWNKAE-NKFLCPCHGSQYNAQGRVVRGPAPLSL 197

[Close]

BLAST of HG10009709 vs. TAIR 10
Match: AT4G03280.2 (photosynthetic electron transfer C )

HSP 1 Score: 54.7 bits (130), Expect = 1.4e-07
Identity = 22/43 (51.16%), Postives = 29/43 (67.44%), Query Frame = 0


Query: 219 VCTHLGCIPLPNAGDYGGWFCPCHGSHYDVSGRIRKGPAPYNL 262
           VCTHLGC+   N  +   + CPCHGS Y+  GR+ +GPAP +L
Sbjct: 137 VCTHLGCVVPWNKAE-NKFLCPCHGSQYNAQGRVVRGPAPLSL 178

The following BLAST results are available for this feature:

BLAST of HG10009709 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874657.1	2.0e-149	95.31	cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Benincasa hispida]	[more]
XP_008465498.1	1.7e-145	93.50	PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis...	[more]
XP_008465508.1	1.5e-144	92.06	PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis...	[more]
XP_023550036.1	3.3e-144	92.42	cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucurbita pepo sub...	[more]
XP_022992735.1	5.6e-144	92.78	cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucurbita maxima]	[more]

BLAST of HG10009709 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P51132	7.0e-113	73.65	Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum OX=...	[more]
P51133	3.8e-111	73.29	Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum OX=...	[more]
P51135	1.4e-110	72.56	Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum OX=...	[more]
P49729	4.2e-110	75.10	Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana ...	[more]
P37841	4.2e-110	72.20	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum OX=41...	[more]

BLAST of HG10009709 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CPE6	8.4e-146	93.50	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis melo OX=3656 GN...	[more]
A0A1S3CP16	7.1e-145	92.06	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1JWJ5	2.7e-144	92.78	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucurbita maxima OX=366...	[more]
A0A6J1FL42	3.9e-143	92.42	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucurbita moschata OX=3...	[more]
A0A0A0KTT3	5.1e-143	92.42	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus OX=3659...	[more]

BLAST of HG10009709 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13440.1	2.5e-110	70.32	Ubiquinol-cytochrome C reductase iron-sulfur subunit	[more]
AT5G13430.1	1.4e-108	68.77	Ubiquinol-cytochrome C reductase iron-sulfur subunit	[more]
AT4G03280.1	1.4e-07	51.16	photosynthetic electron transfer C	[more]
AT4G03280.2	1.4e-07	51.16	photosynthetic electron transfer C	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005805	Rieske iron-sulphur protein, C-terminal	PRINTS	PR00162	RIESKE	coord: 249..261 score: 69.81 coord: 237..249 score: 71.54 coord: 215..226 score: 67.29
IPR004192	Cytochrome b-c1 complex subunit Rieske, transmembrane domain	PFAM	PF02921	UCR_TM	coord: 102..148 e-value: 2.6E-11 score: 43.8
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	GENE3D	2.102.10.10		coord: 146..277 e-value: 2.5E-59 score: 201.1
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	SUPERFAMILY	50022	ISP domain	coord: 139..275
IPR006317	Ubiquinol-cytochrome c reductase, iron-sulphur subunit	TIGRFAM	TIGR01416	TIGR01416	coord: 133..277 e-value: 3.0E-55 score: 184.9
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PFAM	PF00355	Rieske	coord: 160..263 e-value: 1.5E-11 score: 44.1
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PROSITE	PS51296	RIESKE	coord: 207..275 score: 18.714432
IPR014349	Rieske iron-sulphur protein	PANTHER	PTHR10134	CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL	coord: 1..277
None	No IPR available	PANTHER	PTHR10134:SF36	CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL	coord: 1..277
None	No IPR available	CDD	cd03470	Rieske_cytochrome_bc1	coord: 154..277 e-value: 1.8156E-85 score: 249.399
None	No IPR available	SUPERFAMILY	81502	ISP transmembrane anchor	coord: 88..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10009709.1	HG10009709.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c
biological_process	GO:1902600	proton transmembrane transport
cellular_component	GO:0005750	mitochondrial respiratory chain complex III
cellular_component	GO:0016020	membrane
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008121	ubiquinol-cytochrome-c reductase activity