HG10009708 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10009708
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Cytochrome b-c1 complex subunit Rieske, mitochondrial
Location	Chr06: 9106811 .. 9112102 (+)
RNA-Seq Expression	HG10009708
Synteny	HG10009708

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAGGATTGCGGCTCGAAGGCTTTCTTCACTCTCTTCTTCCCATTTCAGGCCCACTATTGCCTCTTCTTTGCCCAGTTCTCACAAGATCATCGATGGTTCTGATTCTGCCCCATCCAATGATTTCAGATCCTTCAACACCTTCCCTTTTGGACCCCACTTTGATCGTAACTGTAGAGGTTAGAGTTCGCTTTCTTATTCTATGAAATACTTTTGTTATTTCTGGTTGTAGTCGATTTATGGCGTTTTTTAGGGTTTGTTTTTGTGGACGTATGCTGCCTTTTAATGTTGCTAGAAAGGGAAATCCTTGTTTAGTGTTTTTGAGTTGCAGTTTTGTCACTTGCTTGTGTAGCCATAATTCGGTTTAGCCGTAGATGGGGATCGGTAATTGTGTTTATTGATCTGCTGTTTAGTCGTATTGATGATGTTGAATCATGCTTTGCATATTCATTTCTCGTTATGAAAATAATGTGAAAATGTGAGAGTCGTTTGGGGGATATCACATCACTTAGCCGAAGCAATCACTTCCTCGTGGTTCTATGTTTGAATCTGCCACCGATTATTTTAGAAGTCTTTAACTTGTTATTTCCATCAACATCATGTTTGCATATTTGTTTCTCATTTTGGCAACATCGAAAACGTGAAATGTTATTTACATTCTGTATTTTTGCAGCAATATGATGGTACCCCTTTGCTGAAGCAACCTCTTCTTCTTCGTTTTTTTTTTTTCTAGTTCTTTCACCGTTGCTCTTCAAAAACTTTAACTTTGTGTTTGGTGGTCTACCACCCAAAAATGTTTGCTTTTATTCATATACTATACTGCTGAGACTCGTACTTCTCTCTATCTCTTTTAGAATTATTGTTTTTTCGATTGTGGAGACACACACATGAATTAAAGAGCTGATGTTTCAAATGGTACAAGGTTTATGGTAATTGATTTTGGTTCCTCTGGTGGCTTCTTCGAGTGTTTAAGTTTAAGTGTGCTTGTGAGAGTTATATTTCTTCTTTTTCTATGGGGTTAAAATTAGTCAGTTTAAGGTTTCCCCTTTTTTGGTGCTGATAATATTCAGTGCATTAATCCATTTTGCATACTCACCAAATCTTGATCAACGGTTGTTATGCAGCAGCAGTGATTGGGGTGTAGATTATTGTTGTTGAGAGAGTATAGTTGTCATTTACAAACCTTAAGCAGTGTCTTTTCCGTTTGGATTGTTTTTATTTCTTTCTTAAAGATTTTTTAATCACCTTCTTGAATTCAAAGTATTCTATAAACAGAACTTGCTAACAGTAACTTTTTGTTTTTAGATGAGAAAGAACTTATTGATATACGAGGAGTTACAATGATACCAAAATAATAATAATAATAATAATAATAATAATAATAATGACTCCATTTAGAAGCGTTCATAATATCCCAAAAGTTCACTGTGAGAGGAGTTTGTTCAAAGGAATGTACCTAAAAAAATGAGAATGATAAAGAAGGCCTTTATTTTTGTTTCAGAATTTAGACACCTAAAAAGAGGCATTGATGGTAGGTAAACATCGAAGATTAGGCATTTCTAGTCCATACCCTTATTTACAATATAACTGAAAAAATGGAATGAAAATAAATGAAAGTTTGCCCAATGAGAGCAAGTGACTCCACTCCCCTTTTCTCTTGACAGATACTTGAGACTCAGTTAAGGGAGTTTGTGTTCCATGAGCTAGGAGAAGAGTTTAATGTTATTAAAAAGAAGAAATGAAATCAGCCCTAGAGATAGGAGTTTATATGCCTAGGCTGAGGGTTGGGGAGAGTTCTTTTAATTAGATACCAATTTGTTAGGATACCTTCTAAGTTCTAACAAGAACACACTTAAGAATAACATTGAAAACTCAAGAACACTCAAATATGAAAATATGTTATATTGTTATAAGAAAAGTAACAAGATAACCTAGCCTTTCGAGAGGGCTAGTCTCTCTTAAATTCCTCAAAGGAAATCCCGCACAAAATTCTTCACATCTCAAGCCTCACTCTCACCTACTATTTATAACCCAAAAGACCTAACCAATTTAATGTCTAATTACTAATATGCCCCTTACTAATAACCATACTAATAATCCTAGTATAACTCGAACTAGGGCTCTCACACCTACATATCCCTATTCTTAAGGATTTTCCTATTTCTCACGAAACAAATATATGATGAGACTGCATAAAGGGCAACTCACGAACGGGCCCCTTTGTCCTGAAATAGTAAGTTTTCCCCTTTGTCCTGAAATAGTAAGTTGAGCAATGCCGCTTCAAACAATGTTAGCTATAATGAGCCAAAGGCACCCCAAAACTCTCTTAGAAATGGCCCAAATTGCAAAGCCAGATTGGAAGGTGCACAAAACATAATCCATAATCCTTAGAATCATCGTGTTACACCTTGTGACACATCATTACATGAAACTCACCATTTAGGTCCTCAAATTTTTTATTTTCAACCCACCATTGTCAACCATACATTTCATGATCTCCCGCCTTGTCAAATGGAAACCCTTGCCTTTTTCGAACACTTTCCACTATGGTCTTTTCCCACCCTAAATCTTGAACAAAGATAGTAAATATCTTACGGAAACCTCATATTTGAAAAGGATAGGCGGCTGGTACTATTACTTATATTAAGACCCACTAACTCCACACCTCGTTAAAGTCACTCACAGATCCAGCTTTGGAGGGCTCATGGTTAATTAATTAATTATTTTTAAAGAAATGAAGAATGGATATATATATAAAACAAAAGGCAAGACAACCTAGGGTCCGAGGGTGGAGGAAACCCCCTCCAAAAAAGCTAACTACATGACAAGAGCTCTCCAATCATTGATAATTGTCAAGATGCTGTAGTTGCAAAAGAATTTTTAATGTAAAGAGACCCACCAAGAAGCCGAATTGGTACAAGATTACAAAAGGAGTCGAAGTCAAACTGAAGAGACTTATCTTGAAAAGAACTGTCATTTCGTTCGGTCCATAAGTTCCACACCAATGCTCTAGTGGCACAGCTAGCCAAAATCCTAGCTTTGCCCATCAAGTTCCAACCATTAAGACCTTCAAGTAGCCAATCATCAATTATTTGGGGAGACGCAACATCAAACCCAACTTCTCAAAATAAAGTTTCAGGCCTTGTAAGCAAAAGAGCAATGGAGAAAAAGGTGGTCCAAATCTTCCACCTCTCTCAAACACAATATGCACCCAGATGGGGATAACTCCCAATTTCTAAACTTCTTTTGCATCGCATCATCAGTATCAAGGCTTCTAAAAGACATGGGCCAGATAAGGACTTCAACTTTCTTAGGGCACTTACTTTTCCACACCAATTTAGTGAGGGGGAAGGCTCATAGTTAGTAAGTACCAACCACAAAATTTTCATCCCCATCAATTTGAAGCTTGAAAATGATCTAGATATAGGCAAAGATAAAATAATGTTAAGATTTTGTTGGACTCAAACAGATAGGTTTTATCTTTTTCATTCCAAAGGTGAATTATCTCCTTGCCCACATGGAAAACCCAACTAGACTTTTGTCCGTACTTGTTAATACTGGCCTGCTAAGGACACACAACCATGAGGAAGAGGAGGGGAATGAGCGATCTCCTTGTCTAACACCCTTAATAGTGCTAGGGAGAACCCTCCTCAGTCTATCAGCCAGTACCTTGACAATAATCGTATACAAGCTTGTAACCAAGCCGATTGGTTTGTGAAACCCTTCACACTTAGAGCATATTCCTTTCTGGACATAAGACAAATATTGGTTTCATCCTCTAAATTAGCAGTTTTCATGAAACTCACTAACCTAACTTAACCTAAATCTCTCTTGATCAAATCTCAATTTTTTGGATCAAATGCCAGAGTGGAACCATCATGCTCCAGAGCCTTACCATTTATTGTAATTTGTCGTCAAAGCTGAAATAATCTCTCTTTATCTTTTCAACGTAGAAGAAGCCTCTAACCTTTCCTTCCACAAACCTAGAGGAAACAGAAACGGAATAGAAAAAAAGTAGAGGAAGACATGTTTTCCCCCTTAATAGCTGTGCCCCATCCCAGTGTGTCACCCTCCCCTGAAAGAGACTCAATGGCGTTTCTATTCCTTCTAATCTTTCCACATCATGGGAGATTGAAGTGTTATGAACTCCCTATCTCTCCCATTTAACCCTAGAGAAACAGATATTCTCCCTCTCTAACTAACTCCTCAAACTTCCCCTAACCTGCACTTCTCTGAACTCCACTAAGAGTTCCAAGGATAATTAATTCTCTTAAGTTTTGCTTGAATGAAATAATGAAGAGATGACCATACTCCTAGAAAAATGGCATCCTGTAGTCTTGAATGCATAAAGAAAATATTATTGTTTATGAAAAAGCTTCAAACTTACTGCTCTAGAAGCTGTCAAAACTTTAACCCTGCATATAGGTTATGGTGACAAACTCATTCAAACTTAACGTAGAAAATAACTAAATTTTGCACCAATAAGCAGGCAGCATAAATTTGAGGAAGACGATGAGCATTCTGGCTTAGGTGATTGATTGGATGATTGCTTTCAATTTTATTTTGTAACTCAGCCCTTTTATTATGAGTAATTCCTTTCTCCTGTGGTGAAGTTTTATGATTTTGTAGAAACATCTCTTTGCCAGGTTTCGCTTCTGATGCATTGACTTCAACAAAGGAAAACAACTTAGTTCCAGATGTTTCTGCTACTGTAGCAGCTGTTAAGAACCCTACTTCAAAGATAGTCTATGACGAATACAATCACGAGCGATTTCCTCCGGGTGACCCAAGCAAGCGTGCATTTGCTTATTTTGTCTTGTCAGGTGGTCGGTTTGTCTATGCTTCTTTGATCCGTCTCCTTGTTCTCAAGTTTGTTCTTAGCATGTCTGCCAGTAAAGACGTTCTTGCCCTTGCTTCACTTGAGGTTGACCTCTCAAGCATTGAGCCTGGTTCTACCGTGACGGTTAAGTGGCGTGGGAAACCAGTATTCATCAGAAGACGAACGGAGGATGATATTAAGTTAGCAAATAGCGTCGACATTGGATCTCTTCGTGACCCACAGCAGGATGGCGAGAGAGTTAAGGATCCAGAATGGCTTATCGTGATCGGTGTCTGCACGCATCTTGGTTGCATTCCCTTGCCAAATGCTGGTGATTTTGGTGGGTGGTTTTGCCCATGCCATGGTTCCCACTACGATGTGTCCGGTAGGATCCGTAAAGGACCAGCACCCTACAATTTGGAGGTACCTACTTACACCTTTTTGGAAGATAACAAGCTTTTGATTGGTTAA

mRNA sequence

ATGTTGAGGATTGCGGCTCGAAGGCTTTCTTCACTCTCTTCTTCCCATTTCAGGCCCACTATTGCCTCTTCTTTGCCCAGTTCTCACAAGATCATCGATGGTTCTGATTCTGCCCCATCCAATGATTTCAGATCCTTCAACACCTTCCCTTTTGGACCCCACTTTGATCGTAACTGTAGAGGTTTCGCTTCTGATGCATTGACTTCAACAAAGGAAAACAACTTAGTTCCAGATGTTTCTGCTACTGTAGCAGCTGTTAAGAACCCTACTTCAAAGATAGTCTATGACGAATACAATCACGAGCGATTTCCTCCGGGTGACCCAAGCAAGCGTGCATTTGCTTATTTTGTCTTGTCAGGTGGTCGGTTTGTCTATGCTTCTTTGATCCGTCTCCTTGTTCTCAAGTTTGTTCTTAGCATGTCTGCCAGTAAAGACGTTCTTGCCCTTGCTTCACTTGAGGTTGACCTCTCAAGCATTGAGCCTGGTTCTACCGTGACGGTTAAGTGGCGTGGGAAACCAGTATTCATCAGAAGACGAACGGAGGATGATATTAAGTTAGCAAATAGCGTCGACATTGGATCTCTTCGTGACCCACAGCAGGATGGCGAGAGAGTTAAGGATCCAGAATGGCTTATCGTGATCGGTGTCTGCACGCATCTTGGTTGCATTCCCTTGCCAAATGCTGGTGATTTTGGTGGGTGGTTTTGCCCATGCCATGGTTCCCACTACGATGTGTCCGGTAGGATCCGTAAAGGACCAGCACCCTACAATTTGGAGGTACCTACTTACACCTTTTTGGAAGATAACAAGCTTTTGATTGGTTAA

Coding sequence (CDS)

ATGTTGAGGATTGCGGCTCGAAGGCTTTCTTCACTCTCTTCTTCCCATTTCAGGCCCACTATTGCCTCTTCTTTGCCCAGTTCTCACAAGATCATCGATGGTTCTGATTCTGCCCCATCCAATGATTTCAGATCCTTCAACACCTTCCCTTTTGGACCCCACTTTGATCGTAACTGTAGAGGTTTCGCTTCTGATGCATTGACTTCAACAAAGGAAAACAACTTAGTTCCAGATGTTTCTGCTACTGTAGCAGCTGTTAAGAACCCTACTTCAAAGATAGTCTATGACGAATACAATCACGAGCGATTTCCTCCGGGTGACCCAAGCAAGCGTGCATTTGCTTATTTTGTCTTGTCAGGTGGTCGGTTTGTCTATGCTTCTTTGATCCGTCTCCTTGTTCTCAAGTTTGTTCTTAGCATGTCTGCCAGTAAAGACGTTCTTGCCCTTGCTTCACTTGAGGTTGACCTCTCAAGCATTGAGCCTGGTTCTACCGTGACGGTTAAGTGGCGTGGGAAACCAGTATTCATCAGAAGACGAACGGAGGATGATATTAAGTTAGCAAATAGCGTCGACATTGGATCTCTTCGTGACCCACAGCAGGATGGCGAGAGAGTTAAGGATCCAGAATGGCTTATCGTGATCGGTGTCTGCACGCATCTTGGTTGCATTCCCTTGCCAAATGCTGGTGATTTTGGTGGGTGGTTTTGCCCATGCCATGGTTCCCACTACGATGTGTCCGGTAGGATCCGTAAAGGACCAGCACCCTACAATTTGGAGGTACCTACTTACACCTTTTTGGAAGATAACAAGCTTTTGATTGGTTAA

Protein sequence

MLRIAARRLSSLSSSHFRPTIASSLPSSHKIIDGSDSAPSNDFRSFNTFPFGPHFDRNCRGFASDALTSTKENNLVPDVSATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG

Homology

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BLAST of HG10009708 vs. NCBI nr
Match: XP_038874813.1 (cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 542.0 bits (1395), Expect = 3.0e-150
Identity = 267/274 (97.45%), Postives = 271/274 (98.91%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSLPSSHKIIDGSDSAPSNDFRSFNTFPFGPHFDRNCR 60
           MLRIAARRLSSLSSSHFRPTIASSLPSSHKIIDGSDSA S+DFRSFNTFPFGPHFDR+CR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPSSHKIIDGSDSASSSDFRSFNTFPFGPHFDRSCR 60

Query: 61  GFASDALTSTKENNLVPDVSATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDALTSTKEN LVPDV ATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALTSTKENILVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHG 240
           EDDIKLANSVD+GSLRDPQQDGERVKDPEWL+VIGVCTHLGCIPLPNAGDFGGWFCPCHG
Sbjct: 181 EDDIKLANSVDLGSLRDPQQDGERVKDPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of HG10009708 vs. NCBI nr
Match: XP_023550035.1 (cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 531.6 bits (1368), Expect = 4.1e-147
Identity = 262/277 (94.58%), Postives = 269/277 (97.11%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSLPSSHKIIDGSDSAPSNDFR---SFNTFPFGPHFDR 60
           MLRIAARRLSSLSSSHFRPTIASSLP SHKIIDG DSAPSNDFR   SFNTFPFGP FDR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHKIIDGGDSAPSNDFRSVTSFNTFPFGPFFDR 60

Query: 61  NCRGFASDALTSTKENNLVPDVSATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120
           NCRGFASDALTSTKE +LVPDV ATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV
Sbjct: 61  NCRGFASDALTSTKETDLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP 240
           RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIV+GVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDYGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           CHGSHYD+SGRIRKGPAPYNLEVPTYTFL++NKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 277

[Close]

BLAST of HG10009708 vs. NCBI nr
Match: XP_022992734.1 (cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 531.6 bits (1368), Expect = 4.1e-147
Identity = 260/274 (94.89%), Postives = 267/274 (97.45%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSLPSSHKIIDGSDSAPSNDFRSFNTFPFGPHFDRNCR 60
           MLRIAARR SSLSSSHFRPTIASSLP SHKIIDG DSA SNDFRSFNTFPFGP FDRNCR
Sbjct: 1   MLRIAARRFSSLSSSHFRPTIASSLPGSHKIIDGGDSASSNDFRSFNTFPFGPIFDRNCR 60

Query: 61  GFASDALTSTKENNLVPDVSATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDALTSTKE +LVPDV ATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALTSTKETDLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHG 240
           EDDIKLANSVDIGSLRDPQQDGERVKDPEWLIV+GVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           SHYD+SGRIRKGPAPYNLEVPTYTFL++NKLLIG
Sbjct: 241 SHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 274

[Close]

BLAST of HG10009708 vs. NCBI nr
Match: XP_022938899.1 (cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 528.5 bits (1360), Expect = 3.5e-146
Identity = 261/277 (94.22%), Postives = 268/277 (96.75%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSLPSSHKIIDGSDSAPSNDFR---SFNTFPFGPHFDR 60
           MLRIAARRLSSLSSSHFRPTIASSLP SHKIIDG DSAPSNDFR   SFNTFPFGP FDR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHKIIDGGDSAPSNDFRSVTSFNTFPFGPFFDR 60

Query: 61  NCRGFASDALTSTKENNLVPDVSATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120
           NCRGFASDALTSTKE +LVPDV ATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV
Sbjct: 61  NCRGFASDALTSTKETDLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP 240
           RRTEDDIKLANSVDIGSLRDPQQD ERVKDPEWLIV+GVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTEDDIKLANSVDIGSLRDPQQDEERVKDPEWLIVVGVCTHLGCIPLPNAGDYGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           CHGSHYD+SGRIRKGPAPYNLEVPTYTFL++NKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 277

[Close]

BLAST of HG10009708 vs. NCBI nr
Match: KAG6579100.1 (hypothetical protein SDJN03_23548, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 526.6 bits (1355), Expect = 1.3e-145
Identity = 260/277 (93.86%), Postives = 267/277 (96.39%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSLPSSHKIIDGSDSAPSNDFR---SFNTFPFGPHFDR 60
           MLRIAARRLSSLSSSHFRPTIASSLP SHK IDG DSAPSND R   SFNTFPFGP FDR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHKTIDGGDSAPSNDSRSVTSFNTFPFGPFFDR 60

Query: 61  NCRGFASDALTSTKENNLVPDVSATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120
           NCRGFASDALTSTKE +LVPDV ATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV
Sbjct: 61  NCRGFASDALTSTKETDLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP 240
           RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIV+GVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDYGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           CHGSHYD+SGRIRKGPAPYNLEVPTYTFL++NKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 277

[Close]

BLAST of HG10009708 vs. ExPASy Swiss-Prot
Match: P51132 (Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 2.4e-113
Identity = 206/276 (74.64%), Postives = 231/276 (83.70%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSLPSSHKIIDGSDSAPSNDFRSFNTF--PFGPHFDRN 60
           MLRIA RR SSLS    R  + S  PSS   I  +  +  +D  S  +        F  +
Sbjct: 1   MLRIAGRRASSLS----RWPVRSVAPSSSAFISANHFSSDDDSSSPRSISPSLASVFLHH 60

Query: 61  CRGFASDALTSTKENNLVPDVSATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVL 120
            RGF+S++++   +  LVPD+  TVAA+KNPTSKIVYDE+NHER+PPGDPSKRAFAYFVL
Sbjct: 61  TRGFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVL 120

Query: 121 SGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRR 180
           +GGRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRR
Sbjct: 121 TGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRR 180

Query: 181 RTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPC 240
           RTEDDI LANSVD+GSLRDPQQD ERVK PEWL+VIGVCTHLGCIPLPNAGDFGGWFCPC
Sbjct: 181 RTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPC 240

Query: 241 HGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           HGSHYD+SGRIRKGPAPYNLEVPTY+FLE+NKLLIG
Sbjct: 241 HGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

[Close]

BLAST of HG10009708 vs. ExPASy Swiss-Prot
Match: P49729 (Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 1.9e-110
Identity = 194/256 (75.78%), Postives = 221/256 (86.33%), Query Frame = 0


Query: 21  IASSLPSSHKIIDGSDSAPSNDFRSFNTF--PFGPHFDRNCRGFASDALTSTKENNLVPD 80
           + S+ PSS   I  +  +  +D  S  +        F  + RGF+S++++   +  LVPD
Sbjct: 3   VRSAAPSSSAFISANHFSSDDDSSSPRSISPSLASVFLHHTRGFSSNSVSPAHDMGLVPD 62

Query: 81  VSATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVL 140
           +  TVAA+KNPTSKIVYDE+NHER+PPGDPSKRAFAYFVL+GGRFVYASL+RLL+LKFVL
Sbjct: 63  LPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLMRLLILKFVL 122

Query: 141 SMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLANSVDIGSLRDP 200
           SMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRTEDDI LANSVD+GSLRDP
Sbjct: 123 SMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDISLANSVDLGSLRDP 182

Query: 201 QQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNL 260
           QQD ERVK+PEWL+VIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYD+SGRIRKGPAPYNL
Sbjct: 183 QQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNL 242

Query: 261 EVPTYTFLEDNKLLIG 275
           EVPTY+FLE+NKLLIG
Sbjct: 243 EVPTYSFLEENKLLIG 258

[Close]

BLAST of HG10009708 vs. ExPASy Swiss-Prot
Match: P51134 (Cytochrome b-c1 complex subunit Rieske-4, mitochondrial OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 1.6e-109
Identity = 185/214 (86.45%), Postives = 204/214 (95.33%), Query Frame = 0


Query: 61  GFASDALTSTKENNLVPDVSATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GF+S++++   +  LVPD+  TVAA+KNPTSKIVYDE+NHER+PPGDPSKRAFAYFVL+G
Sbjct: 23  GFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTG 82

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 83  GRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT 142

Query: 181 EDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHG 240
           EDDI LANSVD+GSLRDPQQD ERVK PEWL+VIGVCTHLGCIPLPNAGDFGGWFCPCHG
Sbjct: 143 EDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHG 202

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           SHYD+SGRIRKGPAPYNLEVPTY+FLE+NKLLIG
Sbjct: 203 SHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 236

[Close]

BLAST of HG10009708 vs. ExPASy Swiss-Prot
Match: P37841 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum OX=4113 GN=FES1 PE=1 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 1.6e-109
Identity = 202/276 (73.19%), Postives = 228/276 (82.61%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSLPSSHKIIDGSDSA--PSNDFRSFNTFPFGPHFDRN 60
           MLR+A RR   LSSS  R +      SS  + D S  A  PS    S         F   
Sbjct: 1   MLRVAGRR---LSSSAARSSSTFFTRSSFTVTDDSSPARSPSPSLTS--------SFLDQ 60

Query: 61  CRGFASDALTSTKENNLVPDVSATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVL 120
            RGF+S++++   +  LV D+ ATVAA+KNP+SKIVYD+ NHER+PPGDPSKRAFAYFVL
Sbjct: 61  IRGFSSNSVSPAHQLGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVL 120

Query: 121 SGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRR 180
           +GGRFVYAS +RLL+LKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRR
Sbjct: 121 TGGRFVYASSVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRR 180

Query: 181 RTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPC 240
           RT+DDIKLANSVD+G+LRDPQQD ERVK+PEWL+V+GVCTHLGCIPLPNAGDFGGWFCPC
Sbjct: 181 RTDDDIKLANSVDLGTLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPC 240

Query: 241 HGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           HGSHYD+SGRIRKGPAPYNLEVPTY+FLE+NKLLIG
Sbjct: 241 HGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 265

[Close]

BLAST of HG10009708 vs. ExPASy Swiss-Prot
Match: P51133 (Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 2.1e-109
Identity = 200/274 (72.99%), Postives = 229/274 (83.58%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSLPSSHKIIDGSDSAPSNDFRSFNTFPFGPHFDRNCR 60
           MLRIA R+LS  SS+  R + A    +     D S    S+  RS +       F    R
Sbjct: 1   MLRIAGRKLS--SSAATRSSSAFFTRNPFTFTDDS----SSPARSPSPASLASQFLDQFR 60

Query: 61  GFASDALTSTKENNLVPDVSATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GF+S++++   +  LV D+ ATVAA+KNP+SKIVYD+ NHER+PPGDPSKRAFAYFVL+G
Sbjct: 61  GFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHG 240
           E+DI LANSVD+GSLRDPQQD ERVK+PEWL+VIGVCTHLGCIPLPNAGDFGGWFCPCHG
Sbjct: 181 EEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           SHYD+SGRIRKGPAPYNLEVPTY+F+E+NKLLIG
Sbjct: 241 SHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268

[Close]

BLAST of HG10009708 vs. ExPASy TrEMBL
Match: A0A6J1JYB8 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111488983 PE=3 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 2.0e-147
Identity = 260/274 (94.89%), Postives = 267/274 (97.45%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSLPSSHKIIDGSDSAPSNDFRSFNTFPFGPHFDRNCR 60
           MLRIAARR SSLSSSHFRPTIASSLP SHKIIDG DSA SNDFRSFNTFPFGP FDRNCR
Sbjct: 1   MLRIAARRFSSLSSSHFRPTIASSLPGSHKIIDGGDSASSNDFRSFNTFPFGPIFDRNCR 60

Query: 61  GFASDALTSTKENNLVPDVSATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDALTSTKE +LVPDV ATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALTSTKETDLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHG 240
           EDDIKLANSVDIGSLRDPQQDGERVKDPEWLIV+GVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           SHYD+SGRIRKGPAPYNLEVPTYTFL++NKLLIG
Sbjct: 241 SHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 274

[Close]

BLAST of HG10009708 vs. ExPASy TrEMBL
Match: A0A6J1FFG4 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111444974 PE=3 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 1.7e-146
Identity = 261/277 (94.22%), Postives = 268/277 (96.75%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSLPSSHKIIDGSDSAPSNDFR---SFNTFPFGPHFDR 60
           MLRIAARRLSSLSSSHFRPTIASSLP SHKIIDG DSAPSNDFR   SFNTFPFGP FDR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHKIIDGGDSAPSNDFRSVTSFNTFPFGPFFDR 60

Query: 61  NCRGFASDALTSTKENNLVPDVSATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120
           NCRGFASDALTSTKE +LVPDV ATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV
Sbjct: 61  NCRGFASDALTSTKETDLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP 240
           RRTEDDIKLANSVDIGSLRDPQQD ERVKDPEWLIV+GVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTEDDIKLANSVDIGSLRDPQQDEERVKDPEWLIVVGVCTHLGCIPLPNAGDYGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           CHGSHYD+SGRIRKGPAPYNLEVPTYTFL++NKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 277

[Close]

BLAST of HG10009708 vs. ExPASy TrEMBL
Match: A0A6J1JKV0 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111487805 PE=3 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 3.9e-143
Identity = 256/277 (92.42%), Postives = 264/277 (95.31%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSLPSSHKIIDGSDSAPSNDFR---SFNTFPFGPHFDR 60
           MLR+AARRLSSLSSSHFRP+IA SLP SHKI+DG DSAPSNDFR   SFNTF FG +F  
Sbjct: 1   MLRVAARRLSSLSSSHFRPSIAPSLPGSHKIVDGGDSAPSNDFRSVSSFNTFAFGSNFAP 60

Query: 61  NCRGFASDALTSTKENNLVPDVSATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120
           NCRGFASDALTS  ENNLVPDV ATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV
Sbjct: 61  NCRGFASDALTSMGENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP 240
           RRTEDDIK+ANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP
Sbjct: 181 RRTEDDIKIANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           CHGSHYD+SGRIRKGPAPYNLEVPTYTFL++NKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 277

[Close]

BLAST of HG10009708 vs. ExPASy TrEMBL
Match: A0A6J1HKM6 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111463881 PE=3 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 3.9e-143
Identity = 256/277 (92.42%), Postives = 265/277 (95.67%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSLPSSHKIIDGSDSAPSNDFR---SFNTFPFGPHFDR 60
           MLR+AARRLSSLSSSHFRP+IASSLP SHKI+DG DSAPSNDFR   SFNTF FG +F  
Sbjct: 1   MLRVAARRLSSLSSSHFRPSIASSLPGSHKIVDGGDSAPSNDFRSVSSFNTFAFGSNFAP 60

Query: 61  NCRGFASDALTSTKENNLVPDVSATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120
           +CRGFASDALTS  ENNLVPDV ATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV
Sbjct: 61  SCRGFASDALTSMGENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP 240
           RRTEDDIK+ANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP
Sbjct: 181 RRTEDDIKIANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           CHGSHYD+SGRIRKGPAPYNLEVPTYTFL++NKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 277

[Close]

BLAST of HG10009708 vs. ExPASy TrEMBL
Match: A0A1S3CP16 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103503125 PE=3 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 2.5e-142
Identity = 258/277 (93.14%), Postives = 263/277 (94.95%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSLPSSHKIIDGSDSAPSNDFRS---FNTFPFGPHFDR 60
           MLRIAARRLSSLSSSHFRPTIASSLP SH IID +D   SNDFRS   FNTFP GPHFDR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNIIDSTD---SNDFRSGGFFNTFPIGPHFDR 60

Query: 61  NCRGFASDALTSTKENNLVPDVSATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120
           N RGFASDAL+S KE NLVPDV ATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV
Sbjct: 61  NSRGFASDALSSMKETNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP 240
           RRTE+DIKLANSVDIG+LRDPQQDGERVKDPEWLIV+GVCTHLGCIPLPNAGDFGGWFCP
Sbjct: 181 RRTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of HG10009708 vs. TAIR 10
Match: AT5G13440.1 (Ubiquinol-cytochrome C reductase iron-sulfur subunit )

HSP 1 Score: 396.0 bits (1016), Expect = 2.5e-110
Identity = 203/282 (71.99%), Postives = 228/282 (80.85%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASS--LPSSHKIIDG------SDSAPSNDFRSFNTFPFG 60
           MLR+A RRL S+S    R + A+S  L   H + DG      S S PS D  SFN++   
Sbjct: 1   MLRVAGRRLFSVSQ---RSSTATSFVLSRDHTLSDGGNSSSASRSVPSADLSSFNSY--- 60

Query: 61  PHFDRNCRGFASDALTSTKENNLVPDVSATVAAVKNPTSKIVYDEYNHERFPPGDPSKRA 120
                  RGFAS  +T   E     +V ATV AVK P SKIVYD++NHER+PPGDPSKRA
Sbjct: 61  --HRSVIRGFASQVITQGNEIGFGSEVPATVEAVKTPNSKIVYDDHNHERYPPGDPSKRA 120

Query: 121 FAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGK 180
           FAYFVLSGGRFVYAS++RLLVLK ++SMSASKDVLALASLEVDL SIEPG+TVTVKWRGK
Sbjct: 121 FAYFVLSGGRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGK 180

Query: 181 PVFIRRRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFG 240
           PVFIRRRTEDDIKLANSVD+GSLRDPQ+D  RVK+PEWLIV+GVCTHLGCIPLPNAGD+G
Sbjct: 181 PVFIRRRTEDDIKLANSVDVGSLRDPQEDSVRVKNPEWLIVVGVCTHLGCIPLPNAGDYG 240

Query: 241 GWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           GWFCPCHGSHYD+SGRIRKGPAPYNLEVPTY+FLE+NKLLIG
Sbjct: 241 GWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 274

[Close]

BLAST of HG10009708 vs. TAIR 10
Match: AT5G13430.1 (Ubiquinol-cytochrome C reductase iron-sulfur subunit )

HSP 1 Score: 388.7 bits (997), Expect = 4.0e-108
Identity = 199/279 (71.33%), Postives = 225/279 (80.65%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSLPSS--HKIIDG---SDSAPSNDFRSFNTFPFGPHF 60
           MLR+A RRL S+S    R + A+S   S  H + DG   S SAP    RS  +     + 
Sbjct: 1   MLRVAGRRLFSVSQ---RSSTATSFVVSRDHTLSDGGGDSSSAP----RSLPSADLSSYH 60

Query: 61  DRNCRGFASDALTSTKENNLVPDVSATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAY 120
               RGF+S  L    E     +V ATV AVK P SKIVYD++NHER+PPGDPSKRAFAY
Sbjct: 61  RSLIRGFSSQVLAQGNEIGFGSEVPATVEAVKTPNSKIVYDDHNHERYPPGDPSKRAFAY 120

Query: 121 FVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVF 180
           FVLSGGRFVYAS++RLLVLK ++SMSASKDVLALASLEVDL SIEPG+TVTVKWRGKPVF
Sbjct: 121 FVLSGGRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPVF 180

Query: 181 IRRRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWF 240
           IRRRTEDDIKLANSVD+GSLRDPQ+D  RVK+PEWL+V+GVCTHLGCIPLPNAGD+GGWF
Sbjct: 181 IRRRTEDDIKLANSVDVGSLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDYGGWF 240

Query: 241 CPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           CPCHGSHYD+SGRIRKGPAPYNLEVPTY+FLE+NKLLIG
Sbjct: 241 CPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

[Close]

BLAST of HG10009708 vs. TAIR 10
Match: AT4G03280.1 (photosynthetic electron transfer C )

HSP 1 Score: 57.4 bits (137), Expect = 2.1e-08
Identity = 25/57 (43.86%), Postives = 34/57 (59.65%), Query Frame = 0


Query: 216 VCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLL 273
           VCTHLGC+   N  +   + CPCHGS Y+  GR+ +GPAP +L +      E  K+L
Sbjct: 156 VCTHLGCVVPWNKAE-NKFLCPCHGSQYNAQGRVVRGPAPLSLALAHADIDEAGKVL 211

[Close]

BLAST of HG10009708 vs. TAIR 10
Match: AT4G03280.2 (photosynthetic electron transfer C )

HSP 1 Score: 57.4 bits (137), Expect = 2.1e-08
Identity = 25/57 (43.86%), Postives = 34/57 (59.65%), Query Frame = 0


Query: 216 VCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLL 273
           VCTHLGC+   N  +   + CPCHGS Y+  GR+ +GPAP +L +      E  K+L
Sbjct: 137 VCTHLGCVVPWNKAE-NKFLCPCHGSQYNAQGRVVRGPAPLSLALAHADIDEAGKVL 192

The following BLAST results are available for this feature:

BLAST of HG10009708 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874813.1	3.0e-150	97.45	cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Benincasa hispida]	[more]
XP_023550035.1	4.1e-147	94.58	cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucurbita pepo sub...	[more]
XP_022992734.1	4.1e-147	94.89	cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucurbita maxima]	[more]
XP_022938899.1	3.5e-146	94.22	cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucurbita moschata...	[more]
KAG6579100.1	1.3e-145	93.86	hypothetical protein SDJN03_23548, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of HG10009708 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P51132	2.4e-113	74.64	Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum OX=...	[more]
P49729	1.9e-110	75.78	Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana ...	[more]
P51134	1.6e-109	86.45	Cytochrome b-c1 complex subunit Rieske-4, mitochondrial OS=Nicotiana tabacum OX=...	[more]
P37841	1.6e-109	73.19	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum OX=41...	[more]
P51133	2.1e-109	72.99	Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum OX=...	[more]

BLAST of HG10009708 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JYB8	2.0e-147	94.89	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucurbita maxima OX=366...	[more]
A0A6J1FFG4	1.7e-146	94.22	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucurbita moschata OX=3...	[more]
A0A6J1JKV0	3.9e-143	92.42	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucurbita maxima OX=366...	[more]
A0A6J1HKM6	3.9e-143	92.42	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucurbita moschata OX=3...	[more]
A0A1S3CP16	2.5e-142	93.14	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis melo OX=3656 GN...	[more]

BLAST of HG10009708 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13440.1	2.5e-110	71.99	Ubiquinol-cytochrome C reductase iron-sulfur subunit	[more]
AT5G13430.1	4.0e-108	71.33	Ubiquinol-cytochrome C reductase iron-sulfur subunit	[more]
AT4G03280.1	2.1e-08	43.86	photosynthetic electron transfer C	[more]
AT4G03280.2	2.1e-08	43.86	photosynthetic electron transfer C	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005805	Rieske iron-sulphur protein, C-terminal	PRINTS	PR00162	RIESKE	coord: 234..246 score: 71.54 coord: 212..223 score: 67.29 coord: 246..258 score: 69.81
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PFAM	PF00355	Rieske	coord: 157..260 e-value: 2.2E-11 score: 43.5
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PROSITE	PS51296	RIESKE	coord: 204..272 score: 18.279629
IPR004192	Cytochrome b-c1 complex subunit Rieske, transmembrane domain	PFAM	PF02921	UCR_TM	coord: 96..145 e-value: 1.7E-11 score: 44.4
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	GENE3D	2.102.10.10		coord: 143..274 e-value: 4.2E-59 score: 200.4
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	SUPERFAMILY	50022	ISP domain	coord: 136..273
IPR006317	Ubiquinol-cytochrome c reductase, iron-sulphur subunit	TIGRFAM	TIGR01416	TIGR01416	coord: 130..274 e-value: 3.1E-55 score: 184.8
None	No IPR available	PANTHER	PTHR10134:SF36	CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL	coord: 1..274
None	No IPR available	CDD	cd03470	Rieske_cytochrome_bc1	coord: 151..274 e-value: 4.86716E-85 score: 248.243
None	No IPR available	SUPERFAMILY	81502	ISP transmembrane anchor	coord: 83..147
IPR014349	Rieske iron-sulphur protein	PANTHER	PTHR10134	CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL	coord: 1..274

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10009708.1	HG10009708.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c
biological_process	GO:1902600	proton transmembrane transport
cellular_component	GO:0005750	mitochondrial respiratory chain complex III
cellular_component	GO:0016020	membrane
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008121	ubiquinol-cytochrome-c reductase activity