HG10009702 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10009702
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	WW domain-containing adapter protein with coiled-coil
Location	Chr06: 9037950 .. 9040193 (+)
RNA-Seq Expression	HG10009702
Synteny	HG10009702

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACTGGTAGACTACGCTTCGTCGGACGACGACGTGCCGGCGGCGGAGGTGGAGGAAAATCGGAAGCAGCCGGACAACCACACCGTCGTAGAGCCTCAATTCCCCAAGCACGAGCCGAGGCCTAAATCTCCTCCCGTCAACCAGTAATTTTTCTTCCATTTCTTCAGATTTTCTAATTCCCAAGCGGAAGAGTTCAAATTCGGATTTCTTTATATTCCAATCGAATTTCAATCATTTTTCTCTTCTAATTTTTCATAAACCAAATAGGTTTTGTCTTTGGAGTTAATTACTACTTGTTCACTCCGAACAATTGGAGGCTTTATACCAGTTCTCCTTAATTTTGTATTGTATCTTTTAGGGCTGTTATTAGTTAAACTGGGAGGAAGGGAGGTTGTTGTGCTTGTGCTTCCAGTTCAGATGTTGTTGAGTGTTTCTTTATAGATTAGCGATATTGTGCTCGTACTGTTGAGTGGCTTTCTGGTTTTAGGGAATGCTTTAGCTGCTGATTCTATTACCTTGGAACAAATTATTTGCTGTTTTTAGCTTTTCTGAGTGTTAGGTCTTGTGTAATTTATTTCCTTGTGATTGGCTCTGTACCCTGTAGGCCCATTCTTAAGCCAAATCAACAATTTGAAACTAATGAGGAGTCTTCTGTGCCTTCGGTTGAGCTTCCTGATGCTTCTCTACTCTTGAATTCTCCAACTTCTTCTAGTCTTTTTGGTGGTAGTGATCATTCTTCTCGAGTGGCAGCGGCTATGGCTGCCAATGCATCTCGCAAGAGAGAAACAAATGTTTTAGGATCTTCTCTTCCTAGGAGTAAAATTCCAAGATCGAGCTTGCCTCACTCTAAGAATGTTCCGGATACTTCAGGCAGTTTGTTGGTTCCACCTCAGCTTACCGGAAGGTTCGTTCTAATGTATTTCCCGTTATTTTCCTTTTGTTTATGCTAGTATTTGCTTTGACTTAAAGTTAATGACATTGTTCCCTGAATGTGTGATACCGCAAGAAAGAAAATAATTGGGTTTGATGCATTTTTATATAGTTTATGGAGCCTGCACTCAGTGATGACAATCAAATCATTTCGAAATCTTGTACATGTTGATGAGTACATTGGCTTAGATAGATTCTTAAGGTACATGTATCCTCATAAGGTGATAGATTGAAAAAAGTTGTATTCATTCTTTAATTAGGAATCACAAATGAATAAATAAATCATATTCCTATAGGCCTATGTAGTATGCATGTATGTCTTCTTTTAGCCCTAGAAAATTGTATTTAGCTTAAAACCCTATACCCCGACCTTGATAACTCTTTTATTTATTTATTTCCCATGAAAGATCTCTCTCTAGCGTCCAATAAAAACCTATGATTCTAAGTTTAGCACACACAATAATAATGGTAATGTATGCTTATGAGGTGATAGAATGAAAAAGGTTGCATTCACTCCTCAACTAGGAAACACAATGAATAAATAAATCATATCCTTATAGCCTATAGGACTATGGAGTATGCATGTATGTATTCTTCTAGCCCTAGAAAATTGTAATAAGTTTATGTCCCTCCACCTCAACGTAGATAACTCTTTTATTTATTTGAAAAGCAATGATGCTAAGTTTAGTATACACGATCATAATGGTAATGTAGTACTAAGAAGTTAAGTATAAGATAAACATGGTTTGTGGACTTCTGGCCATGAATAGTCTGTAAGCCTGTTTTTCTTAATCAATGTTAGTGTTTGAAATGTTGTCAATACACTTGGTTCTATTCTATGAAAGTAAATGCAGCTATGGGTGCTGGTAATCATCATTTTCTGCCTTGCAAGATCTCTGAGCATTTCATTTGTAATGCTTTACTATGGCTCAAAAGTAACTGTAACTTCTTTAAGATATTGTAAATTCACTGGTTTAAGCCGGAAGGAAATTTGACAATTGAATCTTTTAACTGGTGTGATGGTCTTTTCTTTTTTTATTGATTGCTAGTTTCTCTGTCACTGTTCTTTAATATGCTGGATGTGCTCGAGTCCTCCAGCCAGCATCATTATATCACCTTAAGAATCAAACATAGAGATGCAGAAGTCTTAGAGCCCAGCTTTAGTAGTTTGAAAACTCGAAGTTTGAAATATAGGAATTTGGGTGAATTCTGATGCAATTCTGTACTTGGTTTGCCTTTGCCAGGAGTAACATTGTCACTGAAGATATAAGCAAGCTGTTCGTGAAGAAGTCAGCCAAACCGCCCTCGTAG

mRNA sequence

ATGTCACTGGTAGACTACGCTTCGTCGGACGACGACGTGCCGGCGGCGGAGGTGGAGGAAAATCGGAAGCAGCCGGACAACCACACCGTCGTAGAGCCTCAATTCCCCAAGCACGAGCCGAGGCCTAAATCTCCTCCCGTCAACCAGCCCATTCTTAAGCCAAATCAACAATTTGAAACTAATGAGGAGTCTTCTGTGCCTTCGGTTGAGCTTCCTGATGCTTCTCTACTCTTGAATTCTCCAACTTCTTCTAGTCTTTTTGGTGGTAGTGATCATTCTTCTCGAGTGGCAGCGGCTATGGCTGCCAATGCATCTCGCAAGAGAGAAACAAATGTTTTAGGATCTTCTCTTCCTAGGAGTAAAATTCCAAGATCGAGCTTGCCTCACTCTAAGAATGTTCCGGATACTTCAGGCAGTTTGTTGGTTCCACCTCAGCTTACCGGAAGGAGTAACATTGTCACTGAAGATATAAGCAAGCTGTTCGTGAAGAAGTCAGCCAAACCGCCCTCGTAG

Coding sequence (CDS)

ATGTCACTGGTAGACTACGCTTCGTCGGACGACGACGTGCCGGCGGCGGAGGTGGAGGAAAATCGGAAGCAGCCGGACAACCACACCGTCGTAGAGCCTCAATTCCCCAAGCACGAGCCGAGGCCTAAATCTCCTCCCGTCAACCAGCCCATTCTTAAGCCAAATCAACAATTTGAAACTAATGAGGAGTCTTCTGTGCCTTCGGTTGAGCTTCCTGATGCTTCTCTACTCTTGAATTCTCCAACTTCTTCTAGTCTTTTTGGTGGTAGTGATCATTCTTCTCGAGTGGCAGCGGCTATGGCTGCCAATGCATCTCGCAAGAGAGAAACAAATGTTTTAGGATCTTCTCTTCCTAGGAGTAAAATTCCAAGATCGAGCTTGCCTCACTCTAAGAATGTTCCGGATACTTCAGGCAGTTTGTTGGTTCCACCTCAGCTTACCGGAAGGAGTAACATTGTCACTGAAGATATAAGCAAGCTGTTCGTGAAGAAGTCAGCCAAACCGCCCTCGTAG

Protein sequence

MSLVDYASSDDDVPAAEVEENRKQPDNHTVVEPQFPKHEPRPKSPPVNQPILKPNQQFETNEESSVPSVELPDASLLLNSPTSSSLFGGSDHSSRVAAAMAANASRKRETNVLGSSLPRSKIPRSSLPHSKNVPDTSGSLLVPPQLTGRSNIVTEDISKLFVKKSAKPPS

Homology

[Close]

BLAST of HG10009702 vs. NCBI nr
Match: XP_038874519.1 (uncharacterized protein LOC120067146 [Benincasa hispida])

HSP 1 Score: 293.1 bits (749), Expect = 1.5e-75
Identity = 159/175 (90.86%), Postives = 163/175 (93.14%), Query Frame = 0


Query: 1   MSLVDYASSDDDVPAAEVEE-----NRKQPDNHTVVEPQFPKHEPRPKSPPVNQPILKPN 60
           MSLVDYASSDDDVPAAE EE     NRK+ +N TV EPQFPKHEPRPKSPPVNQPILKPN
Sbjct: 1   MSLVDYASSDDDVPAAEEEEEVAEDNRKKSENRTVAEPQFPKHEPRPKSPPVNQPILKPN 60

Query: 61  QQFETNEESSVPSVELPDASLLLNSPTSSSLFGGSDHSSRVAAAMAANASRKRETNVLGS 120
           QQFET EE SVPSVELPDASLLLNSP+SSSLF GSDHSSRVAAAMAANASRKRETNVLGS
Sbjct: 61  QQFETKEEPSVPSVELPDASLLLNSPSSSSLFSGSDHSSRVAAAMAANASRKRETNVLGS 120

Query: 121 SLPRSKIPRSSLPHSKNVPDTSGSLLVPPQLTGRSNIVTEDISKLFVKKSAKPPS 171
           SLPRSK+PRSSLPHSKNVPDTSGSLLVPPQLTGRSNIVTEDISKLFVKKSAKPPS
Sbjct: 121 SLPRSKVPRSSLPHSKNVPDTSGSLLVPPQLTGRSNIVTEDISKLFVKKSAKPPS 175

[Close]

BLAST of HG10009702 vs. NCBI nr
Match: XP_008465558.1 (PREDICTED: uncharacterized protein LOC103503186 [Cucumis melo])

HSP 1 Score: 280.8 bits (717), Expect = 7.8e-72
Identity = 154/174 (88.51%), Postives = 162/174 (93.10%), Query Frame = 0


Query: 1   MSLVDYASSDDDVPAA---EVEENRKQPDNHTVVEPQFPKHEPRPKSPPVNQPILKPNQQ 60
           MSLVDYASSD+DVPAA   E E+NR Q +NHTV EPQ PK+EPRP+SPPVNQPI+KPNQQ
Sbjct: 1   MSLVDYASSDEDVPAAVEEEKEDNRNQSENHTVTEPQLPKYEPRPQSPPVNQPIVKPNQQ 60

Query: 61  FETNEE-SSVPSVELPDASLLLNSPTSSSLFGGSDHSSRVAAAMAANASRKRETNVLGSS 120
           FETNEE SSVP VELPDASLLLNS TSSSLF GSDHSSRVAAAMAANASRKRETNVLGSS
Sbjct: 61  FETNEESSSVPWVELPDASLLLNSQTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120

Query: 121 LPRSKIPRSSLPHSKNVPDTSGSLLVPPQLTGRSNIVTEDISKLFVKKSAKPPS 171
           LPRSK+PRSSLPHSKNVPDTSG+LLVPPQLTGRSNIVTEDISKLFVKKSAKPPS
Sbjct: 121 LPRSKVPRSSLPHSKNVPDTSGTLLVPPQLTGRSNIVTEDISKLFVKKSAKPPS 174

[Close]

BLAST of HG10009702 vs. NCBI nr
Match: XP_031740899.1 (uncharacterized protein LOC101221543 isoform X1 [Cucumis sativus])

HSP 1 Score: 273.5 bits (698), Expect = 1.3e-69
Identity = 149/173 (86.13%), Postives = 158/173 (91.33%), Query Frame = 0


Query: 1   MSLVDYASSDDDVPAA---EVEENRKQPDNHTVVEPQFPKHEPRPKSPPVNQPILKPNQQ 60
           MSLVDYASSD+DVPAA   E ++NR Q +NH + EP  PKHEPRP+SPP+NQPI+KPNQQ
Sbjct: 1   MSLVDYASSDEDVPAAVEEEEKDNRNQSENHIITEPHLPKHEPRPQSPPLNQPIVKPNQQ 60

Query: 61  FETNEE-SSVPSVELPDASLLLNSPTSSSLFGGSDHSSRVAAAMAANASRKRETNVLGSS 120
           FETNEE SSVP V LPDASLLLNSPTSSSLF GSDHSSRVAAAMAANASRKRETNVLGSS
Sbjct: 61  FETNEESSSVPWVGLPDASLLLNSPTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120

Query: 121 LPRSKIPRSSLPHSKNVPDTSGSLLVPPQLTGRSNIVTEDISKLFVKKSAKPP 170
           LPRSK PRSSLPHSKNVPDTSG+LLVPPQLTGRSNIVTEDISKLFVKKSAKPP
Sbjct: 121 LPRSKFPRSSLPHSKNVPDTSGALLVPPQLTGRSNIVTEDISKLFVKKSAKPP 173

[Close]

BLAST of HG10009702 vs. NCBI nr
Match: XP_004143757.1 (uncharacterized protein LOC101221543 isoform X2 [Cucumis sativus] >XP_011655268.1 uncharacterized protein LOC101221543 isoform X3 [Cucumis sativus] >KGN51124.1 hypothetical protein Csa_008852 [Cucumis sativus])

HSP 1 Score: 273.5 bits (698), Expect = 1.3e-69
Identity = 149/173 (86.13%), Postives = 158/173 (91.33%), Query Frame = 0


Query: 1   MSLVDYASSDDDVPAA---EVEENRKQPDNHTVVEPQFPKHEPRPKSPPVNQPILKPNQQ 60
           MSLVDYASSD+DVPAA   E ++NR Q +NH + EP  PKHEPRP+SPP+NQPI+KPNQQ
Sbjct: 1   MSLVDYASSDEDVPAAVEEEEKDNRNQSENHIITEPHLPKHEPRPQSPPLNQPIVKPNQQ 60

Query: 61  FETNEE-SSVPSVELPDASLLLNSPTSSSLFGGSDHSSRVAAAMAANASRKRETNVLGSS 120
           FETNEE SSVP V LPDASLLLNSPTSSSLF GSDHSSRVAAAMAANASRKRETNVLGSS
Sbjct: 61  FETNEESSSVPWVGLPDASLLLNSPTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120

Query: 121 LPRSKIPRSSLPHSKNVPDTSGSLLVPPQLTGRSNIVTEDISKLFVKKSAKPP 170
           LPRSK PRSSLPHSKNVPDTSG+LLVPPQLTGRSNIVTEDISKLFVKKSAKPP
Sbjct: 121 LPRSKFPRSSLPHSKNVPDTSGALLVPPQLTGRSNIVTEDISKLFVKKSAKPP 173

[Close]

BLAST of HG10009702 vs. NCBI nr
Match: XP_022141364.1 (WW domain-containing adapter protein with coiled-coil [Momordica charantia])

HSP 1 Score: 265.4 bits (677), Expect = 3.4e-67
Identity = 144/169 (85.21%), Postives = 154/169 (91.12%), Query Frame = 0


Query: 1   MSLVDYASSDDDVP-AAEVEENRKQPDNHTVVEPQFPKHEPRPKSPPVNQPILKPNQQFE 60
           MSLVDYASSDDDVP AAE E+N +QP+NH V EPQFPKHEP+P+ PP+NQPILKPNQ  E
Sbjct: 1   MSLVDYASSDDDVPAAAEEEQNPEQPENHRVEEPQFPKHEPQPQPPPLNQPILKPNQPLE 60

Query: 61  TNEESSVPSVELPDASLLLNSPTSSSLFGGSDHSSRVAAAMAANASRKRETNVLGSSLPR 120
           TN +SSV SVELPDASLLLNSPTSSSLFGGSDHSSRVAAAMAANASRKRETNV  S+LPR
Sbjct: 61  TNGDSSVFSVELPDASLLLNSPTSSSLFGGSDHSSRVAAAMAANASRKRETNVSASALPR 120

Query: 121 SKIPRSSLPHSKNVPDTSGSLLVPPQLTGRSNIVTEDISKLFVKKSAKP 169
           SK+PRS+LPHSKNVPDT G  LVPPQLTGRSNIVTEDISKLFVKKSAKP
Sbjct: 121 SKVPRSTLPHSKNVPDTLGRSLVPPQLTGRSNIVTEDISKLFVKKSAKP 169

[Close]

BLAST of HG10009702 vs. ExPASy TrEMBL
Match: A0A1S3CP27 (uncharacterized protein LOC103503186 OS=Cucumis melo OX=3656 GN=LOC103503186 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 3.8e-72
Identity = 154/174 (88.51%), Postives = 162/174 (93.10%), Query Frame = 0


Query: 1   MSLVDYASSDDDVPAA---EVEENRKQPDNHTVVEPQFPKHEPRPKSPPVNQPILKPNQQ 60
           MSLVDYASSD+DVPAA   E E+NR Q +NHTV EPQ PK+EPRP+SPPVNQPI+KPNQQ
Sbjct: 1   MSLVDYASSDEDVPAAVEEEKEDNRNQSENHTVTEPQLPKYEPRPQSPPVNQPIVKPNQQ 60

Query: 61  FETNEE-SSVPSVELPDASLLLNSPTSSSLFGGSDHSSRVAAAMAANASRKRETNVLGSS 120
           FETNEE SSVP VELPDASLLLNS TSSSLF GSDHSSRVAAAMAANASRKRETNVLGSS
Sbjct: 61  FETNEESSSVPWVELPDASLLLNSQTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120

Query: 121 LPRSKIPRSSLPHSKNVPDTSGSLLVPPQLTGRSNIVTEDISKLFVKKSAKPPS 171
           LPRSK+PRSSLPHSKNVPDTSG+LLVPPQLTGRSNIVTEDISKLFVKKSAKPPS
Sbjct: 121 LPRSKVPRSSLPHSKNVPDTSGTLLVPPQLTGRSNIVTEDISKLFVKKSAKPPS 174

[Close]

BLAST of HG10009702 vs. ExPASy TrEMBL
Match: A0A0A0KQH2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G457750 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 6.1e-70
Identity = 149/173 (86.13%), Postives = 158/173 (91.33%), Query Frame = 0


Query: 1   MSLVDYASSDDDVPAA---EVEENRKQPDNHTVVEPQFPKHEPRPKSPPVNQPILKPNQQ 60
           MSLVDYASSD+DVPAA   E ++NR Q +NH + EP  PKHEPRP+SPP+NQPI+KPNQQ
Sbjct: 1   MSLVDYASSDEDVPAAVEEEEKDNRNQSENHIITEPHLPKHEPRPQSPPLNQPIVKPNQQ 60

Query: 61  FETNEE-SSVPSVELPDASLLLNSPTSSSLFGGSDHSSRVAAAMAANASRKRETNVLGSS 120
           FETNEE SSVP V LPDASLLLNSPTSSSLF GSDHSSRVAAAMAANASRKRETNVLGSS
Sbjct: 61  FETNEESSSVPWVGLPDASLLLNSPTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120

Query: 121 LPRSKIPRSSLPHSKNVPDTSGSLLVPPQLTGRSNIVTEDISKLFVKKSAKPP 170
           LPRSK PRSSLPHSKNVPDTSG+LLVPPQLTGRSNIVTEDISKLFVKKSAKPP
Sbjct: 121 LPRSKFPRSSLPHSKNVPDTSGALLVPPQLTGRSNIVTEDISKLFVKKSAKPP 173

[Close]

BLAST of HG10009702 vs. ExPASy TrEMBL
Match: A0A6J1CIF3 (WW domain-containing adapter protein with coiled-coil OS=Momordica charantia OX=3673 GN=LOC111011781 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.6e-67
Identity = 144/169 (85.21%), Postives = 154/169 (91.12%), Query Frame = 0


Query: 1   MSLVDYASSDDDVP-AAEVEENRKQPDNHTVVEPQFPKHEPRPKSPPVNQPILKPNQQFE 60
           MSLVDYASSDDDVP AAE E+N +QP+NH V EPQFPKHEP+P+ PP+NQPILKPNQ  E
Sbjct: 1   MSLVDYASSDDDVPAAAEEEQNPEQPENHRVEEPQFPKHEPQPQPPPLNQPILKPNQPLE 60

Query: 61  TNEESSVPSVELPDASLLLNSPTSSSLFGGSDHSSRVAAAMAANASRKRETNVLGSSLPR 120
           TN +SSV SVELPDASLLLNSPTSSSLFGGSDHSSRVAAAMAANASRKRETNV  S+LPR
Sbjct: 61  TNGDSSVFSVELPDASLLLNSPTSSSLFGGSDHSSRVAAAMAANASRKRETNVSASALPR 120

Query: 121 SKIPRSSLPHSKNVPDTSGSLLVPPQLTGRSNIVTEDISKLFVKKSAKP 169
           SK+PRS+LPHSKNVPDT G  LVPPQLTGRSNIVTEDISKLFVKKSAKP
Sbjct: 121 SKVPRSTLPHSKNVPDTLGRSLVPPQLTGRSNIVTEDISKLFVKKSAKP 169

[Close]

BLAST of HG10009702 vs. ExPASy TrEMBL
Match: A0A5A7VCK3 (Chloride channel protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold446G00410 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.4e-66
Identity = 144/166 (86.75%), Postives = 153/166 (92.17%), Query Frame = 0


Query: 1   MSLVDYASSDDDVPAA---EVEENRKQPDNHTVVEPQFPKHEPRPKSPPVNQPILKPNQQ 60
           MSLVDYASSD+DVPAA   E E+NR Q + HTV EPQ PK+EPRP+SPPVNQPI+KPNQQ
Sbjct: 1   MSLVDYASSDEDVPAAVEEEKEDNRNQSEKHTVTEPQLPKYEPRPQSPPVNQPIVKPNQQ 60

Query: 61  FETNEE-SSVPSVELPDASLLLNSPTSSSLFGGSDHSSRVAAAMAANASRKRETNVLGSS 120
           FETNEE SSVP VELPDASLLLNS TSSSLF GSDHSSRVAAAMAANASRKRETNVLGSS
Sbjct: 61  FETNEESSSVPWVELPDASLLLNSQTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120

Query: 121 LPRSKIPRSSLPHSKNVPDTSGSLLVPPQLTGRSNIVTEDISKLFV 163
           LPRSK+PRSSLPHSKNVPDTSG+LLVPPQLTGRSNIVTEDISKLF+
Sbjct: 121 LPRSKVPRSSLPHSKNVPDTSGTLLVPPQLTGRSNIVTEDISKLFL 166

[Close]

BLAST of HG10009702 vs. ExPASy TrEMBL
Match: A0A6J1JRA7 (uncharacterized protein LOC111487632 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487632 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.6e-65
Identity = 143/174 (82.18%), Postives = 151/174 (86.78%), Query Frame = 0


Query: 1   MSLVDYASSDDDVPAAEVEE------NRKQPDNHTVVEPQFPKHEPRPKSPPVNQPILKP 60
           MSLVDYASSDDD  AA  EE      NRK+P++HT  EPQFP  EPR +S PVNQPILKP
Sbjct: 1   MSLVDYASSDDDETAAAAEEEEEQQQNRKKPEDHTTKEPQFPNQEPRSQSHPVNQPILKP 60

Query: 61  NQQFETNEESSVPSVELPDASLLLNSPTSSSLFGGSDHSSRVAAAMAANASRKRETNVLG 120
            Q  ETNE+SSVPSVELPDASLLLNSPTSSSL  GSDHSSRVAAAMAANASRKRETNVLG
Sbjct: 61  KQPSETNEDSSVPSVELPDASLLLNSPTSSSLLSGSDHSSRVAAAMAANASRKRETNVLG 120

Query: 121 SSLPRSKIPRSSLPHSKNVPDTSGSLLVPPQLTGRSNIVTEDISKLFVKKSAKP 169
           SSLPRSK+PRS+LPHSKNVP+T G LLVPPQLTGRSNIVTEDISKLFVKKSAKP
Sbjct: 121 SSLPRSKVPRSNLPHSKNVPETVGRLLVPPQLTGRSNIVTEDISKLFVKKSAKP 174

[Close]

BLAST of HG10009702 vs. TAIR 10
Match: AT5G13470.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 118.2 bits (295), Expect = 6.3e-27
Identity = 89/168 (52.98%), Postives = 109/168 (64.88%), Query Frame = 0


Query: 1   MSLVDY--ASSDDDVPAAEVEENRKQPDNHTVVEPQFPKHEPRPKSPPVNQPILKPNQQF 60
           MSLVDY  +SSDDDV AAE              E   P+ + R  SP  + P     Q+F
Sbjct: 1   MSLVDYDDSSSDDDVLAAE--------------EKPLPQTQKRLVSPAQSFP--PKRQRF 60

Query: 61  ETNEESSVPSVE-LPDASLLLNSPTSSSLFGGSDHSSRVAAAMAANASRKRETNVLGSSL 120
           E +E     SVE LPDA LLL SPT + + GG DH+S VAAAMA +A RKR+ +   SSL
Sbjct: 61  EQDE-----SVEKLPDALLLLESPTLAQVTGG-DHASVVAAAMAESALRKRDLSGNASSL 120

Query: 121 P-RSKIPRSSLPHSKNVPDTSGSLLVPPQLTGRSNIVTEDISKLFVKK 165
           P R K+PR +LPHSKN P+T G++LVPPQL GRSN+ TED+S+LFVKK
Sbjct: 121 PRRPKLPRGNLPHSKNYPETLGNVLVPPQLKGRSNVATEDMSRLFVKK 146

The following BLAST results are available for this feature:

BLAST of HG10009702 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874519.1	1.5e-75	90.86	uncharacterized protein LOC120067146 [Benincasa hispida]	[more]
XP_008465558.1	7.8e-72	88.51	PREDICTED: uncharacterized protein LOC103503186 [Cucumis melo]	[more]
XP_031740899.1	1.3e-69	86.13	uncharacterized protein LOC101221543 isoform X1 [Cucumis sativus]	[more]
XP_004143757.1	1.3e-69	86.13	uncharacterized protein LOC101221543 isoform X2 [Cucumis sativus] >XP_011655268....	[more]
XP_022141364.1	3.4e-67	85.21	WW domain-containing adapter protein with coiled-coil [Momordica charantia]	[more]

BLAST of HG10009702 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10009702 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CP27	3.8e-72	88.51	uncharacterized protein LOC103503186 OS=Cucumis melo OX=3656 GN=LOC103503186 PE=...	[more]
A0A0A0KQH2	6.1e-70	86.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G457750 PE=4 SV=1	[more]
A0A6J1CIF3	1.6e-67	85.21	WW domain-containing adapter protein with coiled-coil OS=Momordica charantia OX=...	[more]
A0A5A7VCK3	1.4e-66	86.75	Chloride channel protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A6J1JRA7	2.6e-65	82.18	uncharacterized protein LOC111487632 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of HG10009702 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13470.1	6.3e-27	52.98	unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..148
None	No IPR available	PANTHER	PTHR33912:SF3	OS01G0939400 PROTEIN	coord: 1..168
IPR040381	Uncharacterized protein At4g14450-like	PANTHER	PTHR33912	OS01G0939400 PROTEIN	coord: 1..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10009702.1	HG10009702.1	mRNA