Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGATCTCTATTCCTTCATCACAGCAATTAATGAAAGAAATCCTGGAATCAACAGCTTACCGATTTCTATCATAATGCAGAGGCCTCCACCAGCCAACAGCTCTCAGACTTGGAATAATCTTGGGAAGACAATTCTTGGCCTTACTTTTCAGGCAGTTTTAACCTTGTTCATTAGCACACCAAGGTCATCCCCTCCAGTTTTTACACACCTCTTTGGGGCTGCAGCGTTGATTAGCTTTGCAGTTTCATTTGCTGGACTTTTCCTTCAAAATGCATTCCCAAGAATCGCGTGTTTGTTCGGAAAGATCGGTGCTCTTATCGCTGCAATTGGTGTGTGCATCATAGCAAGTCTTCTTCTAATCCATCAGAACTTTGCTTGGATCTCTTGGCTGGCATGTGGCCTCTCCTTGATGGCTTTTATTCTATCATTTAAAGGGTAG
mRNA sequence
ATGAATGATCTCTATTCCTTCATCACAGCAATTAATGAAAGAAATCCTGGAATCAACAGCTTACCGATTTCTATCATAATGCAGAGGCCTCCACCAGCCAACAGCTCTCAGACTTGGAATAATCTTGGGAAGACAATTCTTGGCCTTACTTTTCAGGCAGTTTTAACCTTGTTCATTAGCACACCAAGGTCATCCCCTCCAGTTTTTACACACCTCTTTGGGGCTGCAGCGTTGATTAGCTTTGCAGTTTCATTTGCTGGACTTTTCCTTCAAAATGCATTCCCAAGAATCGCGTGTTTGTTCGGAAAGATCGGTGCTCTTATCGCTGCAATTGGTGTGTGCATCATAGCAAGTCTTCTTCTAATCCATCAGAACTTTGCTTGGATCTCTTGGCTGGCATGTGGCCTCTCCTTGATGGCTTTTATTCTATCATTTAAAGGGTAG
Coding sequence (CDS)
ATGAATGATCTCTATTCCTTCATCACAGCAATTAATGAAAGAAATCCTGGAATCAACAGCTTACCGATTTCTATCATAATGCAGAGGCCTCCACCAGCCAACAGCTCTCAGACTTGGAATAATCTTGGGAAGACAATTCTTGGCCTTACTTTTCAGGCAGTTTTAACCTTGTTCATTAGCACACCAAGGTCATCCCCTCCAGTTTTTACACACCTCTTTGGGGCTGCAGCGTTGATTAGCTTTGCAGTTTCATTTGCTGGACTTTTCCTTCAAAATGCATTCCCAAGAATCGCGTGTTTGTTCGGAAAGATCGGTGCTCTTATCGCTGCAATTGGTGTGTGCATCATAGCAAGTCTTCTTCTAATCCATCAGAACTTTGCTTGGATCTCTTGGCTGGCATGTGGCCTCTCCTTGATGGCTTTTATTCTATCATTTAAAGGGTAG
Protein sequence
MNDLYSFITAINERNPGINSLPISIIMQRPPPANSSQTWNNLGKTILGLTFQAVLTLFISTPRSSPPVFTHLFGAAALISFAVSFAGLFLQNAFPRIACLFGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGLSLMAFILSFKG
Homology
BLAST of HG10009651 vs. NCBI nr
Match:
KAA0050246.1 (putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ98160.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa])
HSP 1 Score: 230.3 bits (586), Expect = 1.0e-56
Identity = 121/147 (82.31%), Postives = 131/147 (89.12%), Query Frame = 0
Query: 1 MNDLYSFITAINERNPGINSLPISIIMQRPPPANSSQTWNNLGKTILGLTFQAVLTLFIS 60
MN+LYSFITAINERNP INSLPI I MQRP PANSS+T NN+GKTILGLTFQAVL LFI+
Sbjct: 1 MNELYSFITAINERNPEINSLPICITMQRPSPANSSKTENNVGKTILGLTFQAVLALFIT 60
Query: 61 TPRSSPPVFTHLFGAAALISFAVSFAGLFLQNAFPRIACLFGKIGALIAAIGVCIIASLL 120
+P SSPP+ THLF AA LISFAVSFAG+FLQN FPRIA LF KIGALIAAIGVCI+AS L
Sbjct: 61 SPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIALLFEKIGALIAAIGVCIVAS-L 120
Query: 121 LIHQNFAWISWLACGLSLMAFILSFKG 148
LIHQNFAWISWLA G SLMAF+LSF+G
Sbjct: 121 LIHQNFAWISWLASGFSLMAFVLSFRG 146
BLAST of HG10009651 vs. NCBI nr
Match:
KGN49803.1 (hypothetical protein Csa_004681 [Cucumis sativus])
HSP 1 Score: 216.1 bits (549), Expect = 2.0e-52
Identity = 115/147 (78.23%), Postives = 126/147 (85.71%), Query Frame = 0
Query: 1 MNDLYSFITAINERNPGINSLPISIIMQRPPPANSSQTWNNLGKTILGLTFQAVLTLFIS 60
MN LYS IT+INERNP IN LPI IIMQ PANSS+T NN+G TILGLTFQAVL LFI+
Sbjct: 12 MNHLYSLITSINERNPEINGLPICIIMQTASPANSSKTENNVGTTILGLTFQAVLALFIT 71
Query: 61 TPRSSPPVFTHLFGAAALISFAVSFAGLFLQNAFPRIACLFGKIGALIAAIGVCIIASLL 120
+ SSPP+ THLFGAA LISFAVSF G+FLQ+ FPRIA LF KIGALIAAIGVCI+AS L
Sbjct: 72 SSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIALLFEKIGALIAAIGVCILAS-L 131
Query: 121 LIHQNFAWISWLACGLSLMAFILSFKG 148
LIHQNFAWISWLACG SLMAF+LSF+G
Sbjct: 132 LIHQNFAWISWLACGFSLMAFLLSFRG 157
BLAST of HG10009651 vs. NCBI nr
Match:
KAG6579137.1 (hypothetical protein SDJN03_23585, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 159.5 bits (402), Expect = 2.3e-35
Identity = 86/129 (66.67%), Postives = 99/129 (76.74%), Query Frame = 0
Query: 19 NSLPISIIMQR-PPPANSSQTWNNLGKTILGLTFQAVLTLFISTPRSSPPVFTHLFGAAA 78
+ LP + M R PPP +SSQT NNLGK + GLTFQAVL LFIS P S PP+ H+F AA
Sbjct: 23 DGLPPTTAMPRPPPPPDSSQTRNNLGKIVFGLTFQAVLALFISPPTSCPPLLMHIFAAAM 82
Query: 79 LISFAVSFAGLFLQNAFPRIACLFGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGLS 138
LISFA+S A LFLQ A+PRIA GKIGAL+AAIG C I S+LL HQ+F+WI WLACG +
Sbjct: 83 LISFALSLAALFLQIAYPRIALSSGKIGALLAAIGACTITSVLLKHQHFSWIPWLACGFA 142
Query: 139 LMAFILSFK 147
LMAFILSFK
Sbjct: 143 LMAFILSFK 151
BLAST of HG10009651 vs. NCBI nr
Match:
KAG6579136.1 (hypothetical protein SDJN03_23584, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 151.8 bits (382), Expect = 4.7e-33
Identity = 79/110 (71.82%), Postives = 89/110 (80.91%), Query Frame = 0
Query: 37 QTWNNLGKTILGLTFQAVLTLFISTPRSSPPVFTHLFGAAALISFAVSFAGLFLQNAFPR 96
Q NNLGK + GLTFQAVL LFISTP S PP+ +LF AA LIS A+S A LFLQ AFPR
Sbjct: 30 QARNNLGKIVFGLTFQAVLALFISTPTSFPPLLINLFAAAMLISLALSLAALFLQTAFPR 89
Query: 97 IACLFGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGLSLMAFILSFK 147
IA FGKIGA++AA+G CI+ASLLL HQNF+WI WLACG +LMAFILSFK
Sbjct: 90 IALSFGKIGAMLAAVGACIMASLLLKHQNFSWIPWLACGFALMAFILSFK 139
BLAST of HG10009651 vs. NCBI nr
Match:
KGN49808.1 (hypothetical protein Csa_004650 [Cucumis sativus])
HSP 1 Score: 150.6 bits (379), Expect = 1.1e-32
Identity = 86/154 (55.84%), Postives = 105/154 (68.18%), Query Frame = 0
Query: 1 MNDLYSFITAINERNPGI-------NSLPISIIMQRPPPANSSQTWNNLGKTILGLTFQA 60
M+ SFI I++RN G+ N LP+ I MQ+ P A + + LGK IL L+FQA
Sbjct: 12 MSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQSPQATADSS-QKLGKIILSLSFQA 71
Query: 61 VLTLFISTPRSS-PPVFTHLFGAAALISFAVSFAGLFLQNAFPRIACLFGKIGALIAAIG 120
VL LFIS+P +S PP+ H F AA ISFAVSFA LFL N+FPR A LF K+GAL +A G
Sbjct: 72 VLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTAHLFEKVGALFSAFG 131
Query: 121 VCIIASLLLIHQNFAWISWLACGLSLMAFILSFK 147
VC IAS LL+HQNFAWI W+AC S++ F LSFK
Sbjct: 132 VCFIASFLLVHQNFAWICWVACTFSIIVFALSFK 164
BLAST of HG10009651 vs. ExPASy TrEMBL
Match:
A0A5A7U7U1 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00420 PE=4 SV=1)
HSP 1 Score: 230.3 bits (586), Expect = 5.1e-57
Identity = 121/147 (82.31%), Postives = 131/147 (89.12%), Query Frame = 0
Query: 1 MNDLYSFITAINERNPGINSLPISIIMQRPPPANSSQTWNNLGKTILGLTFQAVLTLFIS 60
MN+LYSFITAINERNP INSLPI I MQRP PANSS+T NN+GKTILGLTFQAVL LFI+
Sbjct: 1 MNELYSFITAINERNPEINSLPICITMQRPSPANSSKTENNVGKTILGLTFQAVLALFIT 60
Query: 61 TPRSSPPVFTHLFGAAALISFAVSFAGLFLQNAFPRIACLFGKIGALIAAIGVCIIASLL 120
+P SSPP+ THLF AA LISFAVSFAG+FLQN FPRIA LF KIGALIAAIGVCI+AS L
Sbjct: 61 SPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIALLFEKIGALIAAIGVCIVAS-L 120
Query: 121 LIHQNFAWISWLACGLSLMAFILSFKG 148
LIHQNFAWISWLA G SLMAF+LSF+G
Sbjct: 121 LIHQNFAWISWLASGFSLMAFVLSFRG 146
BLAST of HG10009651 vs. ExPASy TrEMBL
Match:
A0A0A0KJN8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136870 PE=4 SV=1)
HSP 1 Score: 216.1 bits (549), Expect = 9.9e-53
Identity = 115/147 (78.23%), Postives = 126/147 (85.71%), Query Frame = 0
Query: 1 MNDLYSFITAINERNPGINSLPISIIMQRPPPANSSQTWNNLGKTILGLTFQAVLTLFIS 60
MN LYS IT+INERNP IN LPI IIMQ PANSS+T NN+G TILGLTFQAVL LFI+
Sbjct: 12 MNHLYSLITSINERNPEINGLPICIIMQTASPANSSKTENNVGTTILGLTFQAVLALFIT 71
Query: 61 TPRSSPPVFTHLFGAAALISFAVSFAGLFLQNAFPRIACLFGKIGALIAAIGVCIIASLL 120
+ SSPP+ THLFGAA LISFAVSF G+FLQ+ FPRIA LF KIGALIAAIGVCI+AS L
Sbjct: 72 SSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIALLFEKIGALIAAIGVCILAS-L 131
Query: 121 LIHQNFAWISWLACGLSLMAFILSFKG 148
LIHQNFAWISWLACG SLMAF+LSF+G
Sbjct: 132 LIHQNFAWISWLACGFSLMAFLLSFRG 157
BLAST of HG10009651 vs. ExPASy TrEMBL
Match:
A0A0A0KJP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137410 PE=4 SV=1)
HSP 1 Score: 150.6 bits (379), Expect = 5.1e-33
Identity = 86/154 (55.84%), Postives = 105/154 (68.18%), Query Frame = 0
Query: 1 MNDLYSFITAINERNPGI-------NSLPISIIMQRPPPANSSQTWNNLGKTILGLTFQA 60
M+ SFI I++RN G+ N LP+ I MQ+ P A + + LGK IL L+FQA
Sbjct: 12 MSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQSPQATADSS-QKLGKIILSLSFQA 71
Query: 61 VLTLFISTPRSS-PPVFTHLFGAAALISFAVSFAGLFLQNAFPRIACLFGKIGALIAAIG 120
VL LFIS+P +S PP+ H F AA ISFAVSFA LFL N+FPR A LF K+GAL +A G
Sbjct: 72 VLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTAHLFEKVGALFSAFG 131
Query: 121 VCIIASLLLIHQNFAWISWLACGLSLMAFILSFK 147
VC IAS LL+HQNFAWI W+AC S++ F LSFK
Sbjct: 132 VCFIASFLLVHQNFAWICWVACTFSIIVFALSFK 164
BLAST of HG10009651 vs. ExPASy TrEMBL
Match:
A0A5D3BEH8 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00440 PE=4 SV=1)
HSP 1 Score: 137.1 bits (344), Expect = 5.9e-29
Identity = 83/156 (53.21%), Postives = 97/156 (62.18%), Query Frame = 0
Query: 1 MNDLYSFITAINERNPGINS----------LPISIIMQRPPPANSSQTWNNLGKTILGLT 60
MN+LYSFITA+ RNPGI+S LPI I MQRP P NS Q G T +
Sbjct: 13 MNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRPSPVNSPQ----FGNTFVSSN 72
Query: 61 FQAVLTLFISTPRSSPPVFTHLFGAAALISFAVSFAGLFLQNAFPRIACLFGKIGALIAA 120
FQA+L LF++ P S PP+ + L G L +F SF G+ LQ FP+IA L GAL+AA
Sbjct: 73 FQAILGLFLNLPPSPPPL-SELIGTVMLTAFVFSFCGVLLQKPFPKIAHLLQMFGALLAA 132
Query: 121 IGVCIIASLLLIHQNFAWISWLACGLSLMAFILSFK 147
IGVCI+ S LL H N WI WLACGL L AFI SFK
Sbjct: 133 IGVCIMGSPLL-HPNLTWIRWLACGLILPAFITSFK 162
BLAST of HG10009651 vs. ExPASy TrEMBL
Match:
A0A0A0KQ03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136900 PE=4 SV=1)
HSP 1 Score: 128.3 bits (321), Expect = 2.7e-26
Identity = 83/157 (52.87%), Postives = 95/157 (60.51%), Query Frame = 0
Query: 1 MNDLYSFITAINERNPGINS----------LPISIIMQRPPPANSSQTWNNLGKTILGLT 60
MN L S I A+ RNPGI+S LPI I MQRP P NS Q G T L LT
Sbjct: 13 MNKLNSLIFAVTNRNPGISSCTWGGAASDCLPIYIKMQRPSPVNSPQ----FGNTFLSLT 72
Query: 61 FQAVLTLFIS-TPRSSPPVFTHLFGAAALISFAVSFAGLFLQNAFPRIACLFGKIGALIA 120
FQA++ LF+S P SS P+ + LF A L SF S+ G+ LQ FP+ A L GAL A
Sbjct: 73 FQAIVGLFLSLNPSSSSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKTAQLLQTFGALFA 132
Query: 121 AIGVCIIASLLLIHQNFAWISWLACGLSLMAFILSFK 147
AIG CII SLLL + NF WI WLA GL L AFI+SFK
Sbjct: 133 AIGTCIIGSLLL-YPNFTWICWLAAGLILPAFIISFK 164
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0050246.1 | 1.0e-56 | 82.31 | putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ981... | [more] |
KGN49803.1 | 2.0e-52 | 78.23 | hypothetical protein Csa_004681 [Cucumis sativus] | [more] |
KAG6579137.1 | 2.3e-35 | 66.67 | hypothetical protein SDJN03_23585, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG6579136.1 | 4.7e-33 | 71.82 | hypothetical protein SDJN03_23584, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KGN49808.1 | 1.1e-32 | 55.84 | hypothetical protein Csa_004650 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7U7U1 | 5.1e-57 | 82.31 | Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A0A0KJN8 | 9.9e-53 | 78.23 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136870 PE=4 SV=1 | [more] |
A0A0A0KJP2 | 5.1e-33 | 55.84 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137410 PE=4 SV=1 | [more] |
A0A5D3BEH8 | 5.9e-29 | 53.21 | Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A0A0KQ03 | 2.7e-26 | 52.87 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136900 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |