HG10009645 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10009645
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr06: 8459907 .. 8462169 (-)
RNA-Seq ExpressionHG10009645
SyntenyHG10009645
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGAGTTTCATCCCGCCACTTTTGCAATTCTTGAATCAGAGTTGCATGCCAAGAACATTCAGGTAAGTCTGATCATCTTGCTTGTGGAGTGTTCGAACTTTGAGTAAGGAACTAGTTCTCCTTATCTCGAATCCTTATCTCTTGGTCTTCGATCAAAAGGTAATCCAATTCTAGTCTTTTTCTTTAGATTGACATCAATTGATTTGGATTTTTGGGATTTGTTGTTAGGGGTTCAATAGTTGGATTCTTAATTTTCAAATTGCTAGGGTTTTCATATCAAATGTAATAGTTAAGGTCGGGTTAATAACTATGCTTAATTTTTTTTTTTCAATTTCTTACCATGATTTGCATTTGTCTTAAATTCAAAGAGTTGAATTCTTAACCAAATTTTAAAAACAAAAACAAGTTCTTAAAAACTATTTTTTTAGTTTTCAAAATATTGCTTGATTTTGAAAACATTAGTAAAAAGTAGCAAAGCAAGATTTCGAAGTGGAATAAGTGTTTATAGATTTAATTTTCAAAAACAACAAATCACAAACCAAATGGTTATCTAACGGAGCTTTTAATTTTTGGTTTTTGAAAATTAAGCCTGTAAATACTACTTTCATCTATTGTTGTGTTGTCTAAATTTTAGAAGTATTTTTAAAATCAAAGTCACGTTTTGAAAATTTAAAAAAAAAAATTGTTTTTGTTAGTAGAAATTGTCTAAGAATTCAAATATTTATGTAAGAAGTATGAAAACTATGAGTAAGAAATGGAAAGAAAATAATCACAAATTTTAAAAAATAAAAACCAAATTATTAGATAATGACGCCTAAATAATGTAAATAATGAGAGTGATATTTTCTTGACAAAAATGCCAGTGGTAAATTGTGTACATGGACCACGATTTAGGTAAATTTATACTATGTCATCGTCATAGCAGTATACACAACTTGCTTGACATGTAAGCAAAATTGTGATGTGTCACACCACCTAAAAGTAAAATTTGTCAACTTCGAACTTGTGTATGTGACATGCGAGTTTTGTGACTTAAATAGTTTACCATGTACACGGTTTTCTTCTCTAAAAAAATTGTCTTAGATATAAGTTTTATATCCGTTGAACTATGTTTATGTTGACTTAAATTTTATTGGTTCAAAACTATTTTGTAATTATATACCAAAAAGAAAACTATTATGTACCTTTTTTTTTTTATTTAAAACAACATTATTCCTAAACTTACCTTAGGTTATGGTAAAAAATAACCCGTACATATTTATATTTTTGAAAAAAAAAGTTTATTTTTTTTTAACTCTTTGACTTTTAGATAAGGTAAAGTTACAATTTTATCTTTGCTATATTTAAATCCTTTGTTACTTGTCGTCAATATCGGATCTGAATCGTTGTGTTGTGGAAATTACTGCCTTGAAAGCAAATTTAGTATGACCTTGGTGCGAATCGTTTATGTCGGTTGCTCCCCAAGGTTTATACAACACCCACCTCGAATGTGCATTCGTCGGAGGGAGGATTAGAATCGATGAGAGAAGAAAATAACTCATAATAAGAGGAGAACAAGATGAAGAAGAATGGGATTAATTGGGTAATTGGCTAAAAGTCTAGATTAATTCCCTTTTTACCCCACTTGTATTAAGAACTCTATAGATAGAAGTCTTCCCTCTCATGTATGGACAATGAATGAATAATACTTTTTCCTTTAAGAATTCTCCAAGATTCATAGTCTACATCAATTTGGTATCAGAGTGCCTTCAAGAAAGGGTCCGATGGTTGGCGAGAATACCAACAAAAATCTTGATCTCCCTACCTTAGATGCGGAAGCATCATCATCGTCTCCTCAAACCATTAACCGGCGATTGACTCATGTAAAAACTTCTCTAGTTAAACACAAACTTACTTAAGATCAAACCAATATGATTGGAAATATGGCCACCAAATATTCAACAAGATGTAGAAAATCTTACTTAAGAAGCGAGAAAAAATTTCAAACAATACAGTTTCAAACAAAGTAGTCCCTAATCCAAGAACATCAACAATGAGGTTAAGAACAACACCATAATCTTTTACGCAATCAAGAACAACACTTCAATCCAGTCCATGGCTAAGAACGTGGGAACTTTTATCAAGAATTTCAAAGGCGTGGTCAGTAAGATTACCAAGAACATTAACAATGTGGCCAACATGCATAATTTAGACAGCAAGAAAATCAACCCTAAAACCAAAGGTTTCAAGAAAGAGCAGAAAGAGCAAGAAGTCTACTAA

mRNA sequence

ATGACAGAGTTTCATCCCGCCACTTTTGCAATTCTTGAATCAGAGTTGCATGCCAAGAACATTCAGAACATCAACAATGAGGTTAAGAACAACACCATAATCTTTTACGCAATCAAGAACAACACTTCAATCCAGTCCATGGCTAAGAACGTGGGAACTTTTATCAAGAATTTCAAAGGCGTGGTCAGTAAGATTACCAAGAACATTAACAATGTGGCCAACATGCATAATTTAGACAGCAAGAAAATCAACCCTAAAACCAAAGGTTTCAAGAAAGAGCAGAAAGAGCAAGAAGTCTACTAA

Coding sequence (CDS)

ATGACAGAGTTTCATCCCGCCACTTTTGCAATTCTTGAATCAGAGTTGCATGCCAAGAACATTCAGAACATCAACAATGAGGTTAAGAACAACACCATAATCTTTTACGCAATCAAGAACAACACTTCAATCCAGTCCATGGCTAAGAACGTGGGAACTTTTATCAAGAATTTCAAAGGCGTGGTCAGTAAGATTACCAAGAACATTAACAATGTGGCCAACATGCATAATTTAGACAGCAAGAAAATCAACCCTAAAACCAAAGGTTTCAAGAAAGAGCAGAAAGAGCAAGAAGTCTACTAA

Protein sequence

MTEFHPATFAILESELHAKNIQNINNEVKNNTIIFYAIKNNTSIQSMAKNVGTFIKNFKGVVSKITKNINNVANMHNLDSKKINPKTKGFKKEQKEQEVY
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..100

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10009645.1HG10009645.1mRNA