HG10009617 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10009617
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	protein SLOW GREEN 1, chloroplastic
Location	Chr06: 8217115 .. 8218116 (-)
RNA-Seq Expression	HG10009617
Synteny	HG10009617

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCCCCACATTTGCTTCCATGTCTTCACCTTCTTCTTCATCTCTTTCATCCATCTTCAATTTCAATGCATCTAAATCTAAATCAGTCTCACTCCCGAAGAATCTTCGTTTTGCTGCTCCCCTTTCTCGCAATTCTGTTTCTGTTCATCCTTTTAGGGTTAGGGCTTCCTCTGTTCCCGTTCACAGCAACCACCCTGTTGTTCAATGCCTCCGCAACTACGCCAGAGCTGCGATTCTCATCGGTGCTGCAGCCACCATGGTTGGGAAATTCTCGCATTTGCCTGCGAGAGCTGAATCTCCAGCGGCGGTAGCTGAGGAAGATCAACGGATTGTTGAGGATTCGGAGCAGGACGGGAAGCAATCCTCGCCGTTGAATGACTTTCTCGAATCGAATTCTGAAGCTTTCGAGGCGCTCAAATCGCTCCTGCAGCAAAAGCTTGAAAATGGTGAGGATGAAGAAGCACTGAAAATTTTGAAGCAATTGGTATCTGCTCAGCCGTCGGTGACCGAGTGGAAATTTCTGATGGCTAGATTGCTTGGGGAAATGGGCAAAACGGAAAATGCACGAGACGTTTTTGAAGAGATTTTGGCTGTGAATCCATTGTCTTTCGAAGCATTGTTTGAAAACGCATTGTTAATGGATCGTTGTGGGGAAGGAGAGGCTGTGCTTCGGCGATTAGAAGAGGCTTTAAGAATTGCCGAGAATGAAAACAAAGCGAAGGAAGCCAGAGATGTGAGGTTGATAATGGCTCAAATACAGTTCTTGCAGAAGAATGTAGAGGAAGCCTTGAAGAGTTACAAAGAATTGGCGAAGGAGGATCCTAATGACTTTAGGCCTTACTTCTGTCAGGGAATGATCTACAGCTTGCTTGATAAGAATGTGGAGGCCAAACAGCAATTCGCCAAGTACAGGGAGCTCTCACCAAAGAAATTCGAGGTTGATGGGTATCTACGAACTCCATTGTCAAGGATGAAAATCTTTGGATCAGATGAAAACTAA

mRNA sequence

ATGAGCCCCACATTTGCTTCCATGTCTTCACCTTCTTCTTCATCTCTTTCATCCATCTTCAATTTCAATGCATCTAAATCTAAATCAGTCTCACTCCCGAAGAATCTTCGTTTTGCTGCTCCCCTTTCTCGCAATTCTGTTTCTGTTCATCCTTTTAGGGTTAGGGCTTCCTCTGTTCCCGTTCACAGCAACCACCCTGTTGTTCAATGCCTCCGCAACTACGCCAGAGCTGCGATTCTCATCGGTGCTGCAGCCACCATGGTTGGGAAATTCTCGCATTTGCCTGCGAGAGCTGAATCTCCAGCGGCGGTAGCTGAGGAAGATCAACGGATTGTTGAGGATTCGGAGCAGGACGGGAAGCAATCCTCGCCGTTGAATGACTTTCTCGAATCGAATTCTGAAGCTTTCGAGGCGCTCAAATCGCTCCTGCAGCAAAAGCTTGAAAATGGTGAGGATGAAGAAGCACTGAAAATTTTGAAGCAATTGGTATCTGCTCAGCCGTCGGTGACCGAGTGGAAATTTCTGATGGCTAGATTGCTTGGGGAAATGGGCAAAACGGAAAATGCACGAGACGTTTTTGAAGAGATTTTGGCTGTGAATCCATTGTCTTTCGAAGCATTGTTTGAAAACGCATTGTTAATGGATCGTTGTGGGGAAGGAGAGGCTGTGCTTCGGCGATTAGAAGAGGCTTTAAGAATTGCCGAGAATGAAAACAAAGCGAAGGAAGCCAGAGATGTGAGGTTGATAATGGCTCAAATACAGTTCTTGCAGAAGAATGTAGAGGAAGCCTTGAAGAGTTACAAAGAATTGGCGAAGGAGGATCCTAATGACTTTAGGCCTTACTTCTGTCAGGGAATGATCTACAGCTTGCTTGATAAGAATGTGGAGGCCAAACAGCAATTCGCCAAGTACAGGGAGCTCTCACCAAAGAAATTCGAGGTTGATGGGTATCTACGAACTCCATTGTCAAGGATGAAAATCTTTGGATCAGATGAAAACTAA

Coding sequence (CDS)

ATGAGCCCCACATTTGCTTCCATGTCTTCACCTTCTTCTTCATCTCTTTCATCCATCTTCAATTTCAATGCATCTAAATCTAAATCAGTCTCACTCCCGAAGAATCTTCGTTTTGCTGCTCCCCTTTCTCGCAATTCTGTTTCTGTTCATCCTTTTAGGGTTAGGGCTTCCTCTGTTCCCGTTCACAGCAACCACCCTGTTGTTCAATGCCTCCGCAACTACGCCAGAGCTGCGATTCTCATCGGTGCTGCAGCCACCATGGTTGGGAAATTCTCGCATTTGCCTGCGAGAGCTGAATCTCCAGCGGCGGTAGCTGAGGAAGATCAACGGATTGTTGAGGATTCGGAGCAGGACGGGAAGCAATCCTCGCCGTTGAATGACTTTCTCGAATCGAATTCTGAAGCTTTCGAGGCGCTCAAATCGCTCCTGCAGCAAAAGCTTGAAAATGGTGAGGATGAAGAAGCACTGAAAATTTTGAAGCAATTGGTATCTGCTCAGCCGTCGGTGACCGAGTGGAAATTTCTGATGGCTAGATTGCTTGGGGAAATGGGCAAAACGGAAAATGCACGAGACGTTTTTGAAGAGATTTTGGCTGTGAATCCATTGTCTTTCGAAGCATTGTTTGAAAACGCATTGTTAATGGATCGTTGTGGGGAAGGAGAGGCTGTGCTTCGGCGATTAGAAGAGGCTTTAAGAATTGCCGAGAATGAAAACAAAGCGAAGGAAGCCAGAGATGTGAGGTTGATAATGGCTCAAATACAGTTCTTGCAGAAGAATGTAGAGGAAGCCTTGAAGAGTTACAAAGAATTGGCGAAGGAGGATCCTAATGACTTTAGGCCTTACTTCTGTCAGGGAATGATCTACAGCTTGCTTGATAAGAATGTGGAGGCCAAACAGCAATTCGCCAAGTACAGGGAGCTCTCACCAAAGAAATTCGAGGTTGATGGGTATCTACGAACTCCATTGTCAAGGATGAAAATCTTTGGATCAGATGAAAACTAA

Protein sequence

MSPTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLSRNSVSVHPFRVRASSVPVHSNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEEDQRIVEDSEQDGKQSSPLNDFLESNSEAFEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIAENENKAKEARDVRLIMAQIQFLQKNVEEALKSYKELAKEDPNDFRPYFCQGMIYSLLDKNVEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN

Homology

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BLAST of HG10009617 vs. NCBI nr
Match: XP_038876236.1 (protein SLOW GREEN 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 585.5 bits (1508), Expect = 2.9e-163
Identity = 315/339 (92.92%), Postives = 324/339 (95.58%), Query Frame = 0


Query: 1   MSPTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLSRNSVSVHPFRVRASSVP 60
           MS TFAS+SSP+SSSLSSIFNFNASKSK VSLP NLRFAAPLSRNSVSVHPFRVRASSVP
Sbjct: 1   MSSTFASISSPTSSSLSSIFNFNASKSKMVSLPNNLRFAAPLSRNSVSVHPFRVRASSVP 60

Query: 61  VHSNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVA------EEDQRIVED 120
           V  NHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVA      EEDQRI ED
Sbjct: 61  VSRNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEEASRMEEDQRIAED 120

Query: 121 SEQDGKQSSPLNDFLESNSEAFEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKF 180
           S+Q+GKQSSPLNDFLESNSEA EALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKF
Sbjct: 121 SDQEGKQSSPLNDFLESNSEAIEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKF 180

Query: 181 LMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIA 240
           LMARLLGEMGKTENAR+VFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEAL+IA
Sbjct: 181 LMARLLGEMGKTENAREVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALKIA 240

Query: 241 ENENKAKEARDVRLIMAQIQFLQKNVEEALKSYKELAKEDPNDFRPYFCQGMIYSLLDKN 300
           ENENK KEARDV+LIMAQIQFLQKNVEEALKSYKEL KEDP+DFRPYFCQGMIYSLLDKN
Sbjct: 241 ENENKVKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKN 300

Query: 301 VEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 334
           +EAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 MEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 339

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BLAST of HG10009617 vs. NCBI nr
Match: XP_008466719.1 (PREDICTED: protein SLOW GREEN 1, chloroplastic [Cucumis melo])

HSP 1 Score: 555.4 bits (1430), Expect = 3.2e-154
Identity = 303/343 (88.34%), Postives = 318/343 (92.71%), Query Frame = 0


Query: 1   MSPTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLSRNSVSVHPFRVRASSVP 60
           MS TFASMSSPSSSSLSSIFNFN S SK VS   NLRFAAPLSR+S+SVHPFRVRASSVP
Sbjct: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60

Query: 61  V-HSNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEE---------DQR 120
           V  ++HPVVQCLRNYA+AAILIGAAATMVGKFS+LPARAE+PAAVAEE         D+R
Sbjct: 61  VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAAVAEEASRMEETTPDKR 120

Query: 121 IVEDSEQDGKQSSPLNDFLESNSEAFEALKSLLQQKLENGEDEEALKILKQLVSAQPSVT 180
           IVEDS+QDG+QSSPLNDFLESNSEA EALKSLLQQKLENGEDEEALKILKQLVSA PSVT
Sbjct: 121 IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT 180

Query: 181 EWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEA 240
           EWKFLMARLL EMGKTENAR+VFEEILAV+PLS+EALFENALLMDRCGEGEAVLRRLEEA
Sbjct: 181 EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA 240

Query: 241 LRIAENENKAKEARDVRLIMAQIQFLQKNVEEALKSYKELAKEDPNDFRPYFCQGMIYSL 300
           LRIAE E KAKEARDV+LIMAQIQFLQKNVEEALKSYKEL KEDP+DFRPYFCQGMIYSL
Sbjct: 241 LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL 300

Query: 301 LDKNVEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 334
           LDKN EAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343

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BLAST of HG10009617 vs. NCBI nr
Match: TYJ97188.1 (protein SLOW GREEN 1 [Cucumis melo var. makuwa])

HSP 1 Score: 553.9 bits (1426), Expect = 9.4e-154
Identity = 302/343 (88.05%), Postives = 317/343 (92.42%), Query Frame = 0


Query: 1   MSPTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLSRNSVSVHPFRVRASSVP 60
           MS TFASMSSPSSSSLSSIFNFN S SK VS   NLRFAAPLSR+S+SVHPFRVRASSVP
Sbjct: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60

Query: 61  V-HSNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEE---------DQR 120
           V  ++HPVVQCLRNYA+AAILIGAAATMVGKFS+LPARAE+PA VAEE         D+R
Sbjct: 61  VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAVVAEEASRMEETSPDKR 120

Query: 121 IVEDSEQDGKQSSPLNDFLESNSEAFEALKSLLQQKLENGEDEEALKILKQLVSAQPSVT 180
           IVEDS+QDG+QSSPLNDFLESNSEA EALKSLLQQKLENGEDEEALKILKQLVSA PSVT
Sbjct: 121 IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT 180

Query: 181 EWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEA 240
           EWKFLMARLL EMGKTENAR+VFEEILAV+PLS+EALFENALLMDRCGEGEAVLRRLEEA
Sbjct: 181 EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA 240

Query: 241 LRIAENENKAKEARDVRLIMAQIQFLQKNVEEALKSYKELAKEDPNDFRPYFCQGMIYSL 300
           LRIAE E KAKEARDV+LIMAQIQFLQKNVEEALKSYKEL KEDP+DFRPYFCQGMIYSL
Sbjct: 241 LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL 300

Query: 301 LDKNVEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 334
           LDKN EAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343

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BLAST of HG10009617 vs. NCBI nr
Match: XP_004149472.1 (protein SLOW GREEN 1, chloroplastic [Cucumis sativus] >KAE8648295.1 hypothetical protein Csa_017797 [Cucumis sativus])

HSP 1 Score: 552.7 bits (1423), Expect = 2.1e-153
Identity = 302/345 (87.54%), Postives = 316/345 (91.59%), Query Frame = 0


Query: 1   MSPTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLSRNSVSVHPFRVRASSVP 60
           MS TFAS+SSPSSSS SSIFNFN S SK VS   NLRFAAPLSR+SVSVHPFRVRASSVP
Sbjct: 1   MSSTFASISSPSSSSFSSIFNFNPSNSKMVSFSNNLRFAAPLSRSSVSVHPFRVRASSVP 60

Query: 61  V---HSNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEE---------D 120
           V    ++HPVV CLRNYA+AAILIGAAATMVGKFS+LPARAES A VAEE         D
Sbjct: 61  VPVPRTHHPVVHCLRNYAKAAILIGAAATMVGKFSNLPARAESSAVVAEEASRVEETTSD 120

Query: 121 QRIVEDSEQDGKQSSPLNDFLESNSEAFEALKSLLQQKLENGEDEEALKILKQLVSAQPS 180
            RI EDS+QDG+QSSPLNDFLESNSEA EALKSLLQQKLENGEDEEALKILKQLVSA PS
Sbjct: 121 HRIFEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPS 180

Query: 181 VTEWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLE 240
           VTEWKFLMARLLGEMGKTE+AR+VFEEILAVNPLSFEALFENALLMDRCGEGEAV+RRLE
Sbjct: 181 VTEWKFLMARLLGEMGKTEHAREVFEEILAVNPLSFEALFENALLMDRCGEGEAVIRRLE 240

Query: 241 EALRIAENENKAKEARDVRLIMAQIQFLQKNVEEALKSYKELAKEDPNDFRPYFCQGMIY 300
           EALRIAENENKAKEARDV+LIMAQIQFLQKNVEEALKSYKEL KEDP+DFRPYFCQGMIY
Sbjct: 241 EALRIAENENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIY 300

Query: 301 SLLDKNVEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 334
           SLLDKN+EAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 SLLDKNIEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 345

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BLAST of HG10009617 vs. NCBI nr
Match: XP_022146470.1 (protein SLOW GREEN 1, chloroplastic [Momordica charantia])

HSP 1 Score: 552.4 bits (1422), Expect = 2.7e-153
Identity = 304/341 (89.15%), Postives = 318/341 (93.26%), Query Frame = 0


Query: 1   MSPTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLSRNSVSVHPFRVRASSVP 60
           MS TFA+MSSPSSSSLSSIF+FNASK K VS P NLRFAAPLSRNSV V  FRVRASS P
Sbjct: 1   MSSTFAAMSSPSSSSLSSIFHFNASKPKPVS-PPNLRFAAPLSRNSVYVQRFRVRASSAP 60

Query: 61  V---HSNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVA------EEDQRI 120
           +     NHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVA      EED+++
Sbjct: 61  LPDASRNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEEASRMEEDRQV 120

Query: 121 VEDSEQDGKQSSPLNDFLESNSEAFEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTE 180
           VEDS++D +QSSPLNDFLESNSEA EALKSLLQQKLENGEDEEALKILKQLVSAQPSVTE
Sbjct: 121 VEDSDRDRQQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTE 180

Query: 181 WKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEAL 240
           WKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEAL
Sbjct: 181 WKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEAL 240

Query: 241 RIAENENKAKEARDVRLIMAQIQFLQKNVEEALKSYKELAKEDPNDFRPYFCQGMIYSLL 300
           RIAE+ENKAKEARDV+LIMAQIQFLQKNVEEALKSYKEL KEDPNDFRPYFCQGMIYSLL
Sbjct: 241 RIAEDENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLL 300

Query: 301 DKNVEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 333
           DKNVEA++QF+KYRELSPKKFEVDGYLRTPLSRMKIFGSDE
Sbjct: 301 DKNVEAREQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 340

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BLAST of HG10009617 vs. ExPASy Swiss-Prot
Match: Q9LS48 (protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 1.1e-96
Identity = 204/325 (62.77%), Postives = 248/325 (76.31%), Query Frame = 0


Query: 8   MSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLSRNSVSVHPFRVRASSVPVHSNHPV 67
           M S  S+S S + +F A K+  V+ P   R      R+ +S+   R+RASS    S +  
Sbjct: 1   MISSLSASSSLVSSFVAVKATPVTGPLIPR------RDLLSI---RIRASSNQNSSGYCF 60

Query: 68  VQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEEDQRIVEDSEQDGKQSSPLND 127
            +  +++A++AILIGAA +M GKFS LP +AESP    E+     E  E+   + +PL++
Sbjct: 61  PEKFKSFAKSAILIGAAVSMTGKFSTLPVKAESPVTTIEKTYE--EVKEEKLSEITPLSE 120

Query: 128 FLESNSEAFEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTE 187
            L+S  EA E L+SLLQQKLE GEDEEALK+L++LV+AQP  TEWKFLMARLLGEMG+ E
Sbjct: 121 LLDSTPEAVETLRSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARLLGEMGRPE 180

Query: 188 NARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIAENENKAKEARDVR 247
           NAR +FEEIL  NPLSFEALFENALLMDR GEG AVL+RLE+AL +AE E   KEARDVR
Sbjct: 181 NARQMFEEILQRNPLSFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYLVKEARDVR 240

Query: 248 LIMAQIQFLQKNVEEALKSYKELAKEDPNDFRPYFCQGMIYSLLDKNVEAKQQFAKYREL 307
           LI+AQI FLQKNV+EALKSY++L KEDP DFRPYFC+GMIYSLLDKNVEAK+QFAKYREL
Sbjct: 241 LIIAQIHFLQKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQFAKYREL 300

Query: 308 SPKKFEVDGYLRTPLSRMKIFGSDE 333
           SPKKFEV+GYLRTPLS+MK+FG  E
Sbjct: 301 SPKKFEVEGYLRTPLSKMKLFGGSE 314

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BLAST of HG10009617 vs. ExPASy Swiss-Prot
Match: O06917 (TPR repeat-containing protein MJ0263 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0263 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 5.2e-06
Identity = 42/157 (26.75%), Postives = 75/157 (47.77%), Query Frame = 0


Query: 147 LENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEA 206
           +E GE E+AL+ L + +   P++T      A +L  +GK + A D   +IL++      A
Sbjct: 125 IEFGEFEKALEALDEFLKIYPNLTSILRQKASILEILGKLDEALDCVNKILSIKKDDAHA 184

Query: 207 LFENALLMDRCGEGEAVLRRLEEALRIAENENKAKEARDVRLIMAQIQFLQKNVEEALKS 266
            +    ++ + G  +  L  L+ A+ +  NEN     +D+    A ++    N EEAL  
Sbjct: 185 WYLKGRILKKLGNIKEALDALKMAINL--NENLVHVYKDI----AYLELANNNYEEALNY 244

Query: 267 YKELAKEDPNDFRPYFCQGMIYSLLDKNVEAKQQFAK 304
             +  ++ PND    F   +IY  L+K  +A + + K
Sbjct: 245 ITKYLEKFPNDVEAKFYLALIYENLNKVDDALKIYDK 275

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BLAST of HG10009617 vs. ExPASy Swiss-Prot
Match: Q3UV71 (Protein O-mannosyl-transferase TMTC1 OS=Mus musculus OX=10090 GN=Tmtc1 PE=2 SV=2)

HSP 1 Score: 48.9 bits (115), Expect = 1.3e-04
Identity = 40/180 (22.22%), Postives = 81/180 (45.00%), Query Frame = 0


Query: 137 EALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDVFEEI 196
           E L  L       G  +EAL++ ++ VS QPS  E +  +A++L  MG+T+ A  +   I
Sbjct: 744 EVLSPLGALYYNTGRHKEALEVYREAVSLQPSQRELRLALAQVLAVMGQTKEAEKITSHI 803

Query: 197 LAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIAENENKAKEARDVRLIMAQIQFL 256
           ++  P   E     + +  +       L  +E+AL++   + K         +++++ F 
Sbjct: 804 VSEEPRCLECYRLLSAIHSKQEHHGKALEAIEKALQLKPKDPK---------VISELFFT 863

Query: 257 QKN-------VEEALKSYKELAKEDPNDFRPYFCQGMIYSLLDKNVEAKQQFAKYRELSP 310
           + N       +++A +SY+     DP+  + +   G I  +    V A+  + +  +L P
Sbjct: 864 KGNQLREQNLLDKAFESYEAAVTLDPDQAQAWMNMGGIRHIQGSYVSARAYYERALKLVP 914

[Close]

BLAST of HG10009617 vs. ExPASy TrEMBL
Match: A0A1S3CRV7 (protein SLOW GREEN 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103504062 PE=4 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 1.6e-154
Identity = 303/343 (88.34%), Postives = 318/343 (92.71%), Query Frame = 0


Query: 1   MSPTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLSRNSVSVHPFRVRASSVP 60
           MS TFASMSSPSSSSLSSIFNFN S SK VS   NLRFAAPLSR+S+SVHPFRVRASSVP
Sbjct: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60

Query: 61  V-HSNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEE---------DQR 120
           V  ++HPVVQCLRNYA+AAILIGAAATMVGKFS+LPARAE+PAAVAEE         D+R
Sbjct: 61  VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAAVAEEASRMEETTPDKR 120

Query: 121 IVEDSEQDGKQSSPLNDFLESNSEAFEALKSLLQQKLENGEDEEALKILKQLVSAQPSVT 180
           IVEDS+QDG+QSSPLNDFLESNSEA EALKSLLQQKLENGEDEEALKILKQLVSA PSVT
Sbjct: 121 IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT 180

Query: 181 EWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEA 240
           EWKFLMARLL EMGKTENAR+VFEEILAV+PLS+EALFENALLMDRCGEGEAVLRRLEEA
Sbjct: 181 EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA 240

Query: 241 LRIAENENKAKEARDVRLIMAQIQFLQKNVEEALKSYKELAKEDPNDFRPYFCQGMIYSL 300
           LRIAE E KAKEARDV+LIMAQIQFLQKNVEEALKSYKEL KEDP+DFRPYFCQGMIYSL
Sbjct: 241 LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL 300

Query: 301 LDKNVEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 334
           LDKN EAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343

[Close]

BLAST of HG10009617 vs. ExPASy TrEMBL
Match: A0A5D3BG83 (Protein SLOW GREEN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174G00680 PE=4 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 4.5e-154
Identity = 302/343 (88.05%), Postives = 317/343 (92.42%), Query Frame = 0


Query: 1   MSPTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLSRNSVSVHPFRVRASSVP 60
           MS TFASMSSPSSSSLSSIFNFN S SK VS   NLRFAAPLSR+S+SVHPFRVRASSVP
Sbjct: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60

Query: 61  V-HSNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEE---------DQR 120
           V  ++HPVVQCLRNYA+AAILIGAAATMVGKFS+LPARAE+PA VAEE         D+R
Sbjct: 61  VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAVVAEEASRMEETSPDKR 120

Query: 121 IVEDSEQDGKQSSPLNDFLESNSEAFEALKSLLQQKLENGEDEEALKILKQLVSAQPSVT 180
           IVEDS+QDG+QSSPLNDFLESNSEA EALKSLLQQKLENGEDEEALKILKQLVSA PSVT
Sbjct: 121 IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT 180

Query: 181 EWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEA 240
           EWKFLMARLL EMGKTENAR+VFEEILAV+PLS+EALFENALLMDRCGEGEAVLRRLEEA
Sbjct: 181 EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA 240

Query: 241 LRIAENENKAKEARDVRLIMAQIQFLQKNVEEALKSYKELAKEDPNDFRPYFCQGMIYSL 300
           LRIAE E KAKEARDV+LIMAQIQFLQKNVEEALKSYKEL KEDP+DFRPYFCQGMIYSL
Sbjct: 241 LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL 300

Query: 301 LDKNVEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 334
           LDKN EAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343

[Close]

BLAST of HG10009617 vs. ExPASy TrEMBL
Match: A0A6J1CXB6 (protein SLOW GREEN 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111015681 PE=4 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.3e-153
Identity = 304/341 (89.15%), Postives = 318/341 (93.26%), Query Frame = 0


Query: 1   MSPTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLSRNSVSVHPFRVRASSVP 60
           MS TFA+MSSPSSSSLSSIF+FNASK K VS P NLRFAAPLSRNSV V  FRVRASS P
Sbjct: 1   MSSTFAAMSSPSSSSLSSIFHFNASKPKPVS-PPNLRFAAPLSRNSVYVQRFRVRASSAP 60

Query: 61  V---HSNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVA------EEDQRI 120
           +     NHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVA      EED+++
Sbjct: 61  LPDASRNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEEASRMEEDRQV 120

Query: 121 VEDSEQDGKQSSPLNDFLESNSEAFEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTE 180
           VEDS++D +QSSPLNDFLESNSEA EALKSLLQQKLENGEDEEALKILKQLVSAQPSVTE
Sbjct: 121 VEDSDRDRQQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTE 180

Query: 181 WKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEAL 240
           WKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEAL
Sbjct: 181 WKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEAL 240

Query: 241 RIAENENKAKEARDVRLIMAQIQFLQKNVEEALKSYKELAKEDPNDFRPYFCQGMIYSLL 300
           RIAE+ENKAKEARDV+LIMAQIQFLQKNVEEALKSYKEL KEDPNDFRPYFCQGMIYSLL
Sbjct: 241 RIAEDENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLL 300

Query: 301 DKNVEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 333
           DKNVEA++QF+KYRELSPKKFEVDGYLRTPLSRMKIFGSDE
Sbjct: 301 DKNVEAREQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 340

[Close]

BLAST of HG10009617 vs. ExPASy TrEMBL
Match: A0A6J1GYL7 (protein SLOW GREEN 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111458452 PE=4 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 6.0e-146
Identity = 294/339 (86.73%), Postives = 305/339 (89.97%), Query Frame = 0


Query: 1   MSPTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLSRNSVSVHPFRVRASSVP 60
           MS TFASMSSPSSSSLSSI  F +SKSK V  P NLRFAAP+SR SVSVH FRVRASSVP
Sbjct: 1   MSFTFASMSSPSSSSLSSI--FISSKSKPVP-PPNLRFAAPISRTSVSVHRFRVRASSVP 60

Query: 61  VHSNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAV------AEEDQRIVED 120
           V  NHPVVQC +NYARAAILIGAAATMVGKFSHLPARAESP  V       EE+QRIVED
Sbjct: 61  VSRNHPVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPVVVEEEASRIEEEQRIVED 120

Query: 121 SEQDGKQSSPLNDFLESNSEAFEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKF 180
           S+QDG+QSSPLNDFLESNSEA EALKSLLQQKLEN EDEEALKIL QLVSAQ SVTEWKF
Sbjct: 121 SDQDGQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKF 180

Query: 181 LMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIA 240
           L ARLLGEMGKTENAR+VFEEILA NPLSFEALFENALLMDRCGEGEAVL RLE+ALRIA
Sbjct: 181 LKARLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLEQALRIA 240

Query: 241 ENENKAKEARDVRLIMAQIQFLQKNVEEALKSYKELAKEDPNDFRPYFCQGMIYSLLDKN 300
           ENE KAKEARDVRLIMAQIQFLQKNVE AL SYKEL KEDP+DFRPYFCQGMIYSLLDKN
Sbjct: 241 ENEKKAKEARDVRLIMAQIQFLQKNVEGALTSYKELIKEDPSDFRPYFCQGMIYSLLDKN 300

Query: 301 VEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 334
            EA+QQF+KYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 EEARQQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 336

[Close]

BLAST of HG10009617 vs. ExPASy TrEMBL
Match: A0A0A0KMW6 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G114590 PE=4 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 7.3e-144
Identity = 279/316 (88.29%), Postives = 292/316 (92.41%), Query Frame = 0


Query: 30  VSLPKNLRFAAPLSRNSVSVHPFRVRASSVPV---HSNHPVVQCLRNYARAAILIGAAAT 89
           VS   NLRFAAPLSR+SVSVHPFRVRASSVPV    ++HPVV CLRNYA+AAILIGAAAT
Sbjct: 2   VSFSNNLRFAAPLSRSSVSVHPFRVRASSVPVPVPRTHHPVVHCLRNYAKAAILIGAAAT 61

Query: 90  MVGKFSHLPARAESPAAVAEE---------DQRIVEDSEQDGKQSSPLNDFLESNSEAFE 149
           MVGKFS+LPARAES A VAEE         D RI EDS+QDG+QSSPLNDFLESNSEA E
Sbjct: 62  MVGKFSNLPARAESSAVVAEEASRVEETTSDHRIFEDSDQDGRQSSPLNDFLESNSEAVE 121

Query: 150 ALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDVFEEIL 209
           ALKSLLQQKLENGEDEEALKILKQLVSA PSVTEWKFLMARLLGEMGKTE+AR+VFEEIL
Sbjct: 122 ALKSLLQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLGEMGKTEHAREVFEEIL 181

Query: 210 AVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIAENENKAKEARDVRLIMAQIQFLQ 269
           AVNPLSFEALFENALLMDRCGEGEAV+RRLEEALRIAENENKAKEARDV+LIMAQIQFLQ
Sbjct: 182 AVNPLSFEALFENALLMDRCGEGEAVIRRLEEALRIAENENKAKEARDVKLIMAQIQFLQ 241

Query: 270 KNVEEALKSYKELAKEDPNDFRPYFCQGMIYSLLDKNVEAKQQFAKYRELSPKKFEVDGY 329
           KNVEEALKSYKEL KEDP+DFRPYFCQGMIYSLLDKN+EAKQQFAKYRELSPKKFEVDGY
Sbjct: 242 KNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNIEAKQQFAKYRELSPKKFEVDGY 301

Query: 330 LRTPLSRMKIFGSDEN 334
           LRTPLSRMKIFGSDEN
Sbjct: 302 LRTPLSRMKIFGSDEN 317

[Close]

BLAST of HG10009617 vs. TAIR 10
Match: AT3G18420.1 (Protein prenylyltransferase superfamily protein )

HSP 1 Score: 354.8 bits (909), Expect = 7.8e-98
Identity = 204/325 (62.77%), Postives = 248/325 (76.31%), Query Frame = 0


Query: 8   MSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLSRNSVSVHPFRVRASSVPVHSNHPV 67
           M S  S+S S + +F A K+  V+ P   R      R+ +S+   R+RASS    S +  
Sbjct: 1   MISSLSASSSLVSSFVAVKATPVTGPLIPR------RDLLSI---RIRASSNQNSSGYCF 60

Query: 68  VQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEEDQRIVEDSEQDGKQSSPLND 127
            +  +++A++AILIGAA +M GKFS LP +AESP    E+     E  E+   + +PL++
Sbjct: 61  PEKFKSFAKSAILIGAAVSMTGKFSTLPVKAESPVTTIEKTYE--EVKEEKLSEITPLSE 120

Query: 128 FLESNSEAFEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTE 187
            L+S  EA E L+SLLQQKLE GEDEEALK+L++LV+AQP  TEWKFLMARLLGEMG+ E
Sbjct: 121 LLDSTPEAVETLRSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARLLGEMGRPE 180

Query: 188 NARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIAENENKAKEARDVR 247
           NAR +FEEIL  NPLSFEALFENALLMDR GEG AVL+RLE+AL +AE E   KEARDVR
Sbjct: 181 NARQMFEEILQRNPLSFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYLVKEARDVR 240

Query: 248 LIMAQIQFLQKNVEEALKSYKELAKEDPNDFRPYFCQGMIYSLLDKNVEAKQQFAKYREL 307
           LI+AQI FLQKNV+EALKSY++L KEDP DFRPYFC+GMIYSLLDKNVEAK+QFAKYREL
Sbjct: 241 LIIAQIHFLQKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQFAKYREL 300

Query: 308 SPKKFEVDGYLRTPLSRMKIFGSDE 333
           SPKKFEV+GYLRTPLS+MK+FG  E
Sbjct: 301 SPKKFEVEGYLRTPLSKMKLFGGSE 314

[Close]

BLAST of HG10009617 vs. TAIR 10
Match: AT2G37400.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 140.6 bits (353), Expect = 2.3e-33
Identity = 77/210 (36.67%), Postives = 125/210 (59.52%), Query Frame = 0


Query: 120 KQSSPLNDFLESNSEAFEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARL 179
           ++   L ++L S+ +  EAL+SL++ ++++ +  EA++++ +L+  +P   EW  L A +
Sbjct: 114 EEERSLEEYLASHPDDVEALRSLMEVRIKSRKLLEAIELIDRLIELEPEEKEWPMLKANI 173

Query: 180 LGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEG-EAVLRRLEEALRIAENEN 239
               G  E+A+  FEEIL  +PL  EA     +     G+   AV +R+EEA+   + E 
Sbjct: 174 FSYSGDLESAKTGFEEILVKDPLRVEAYHGLVMAYSDSGDDLNAVEKRIEEAMVRCKKEK 233

Query: 240 KAKEARDVRLIMAQIQFLQKNVEEALKSYKELAKEDPNDFRPYFCQGMIYSLLDKNVEAK 299
             K+ RD +L++AQI+ ++    EALK Y+EL KE+P DFRPY CQG+IY++L K  EA+
Sbjct: 234 NRKDLRDFKLLVAQIRVIEGKHNEALKLYEELVKEEPRDFRPYLCQGIIYTVLKKENEAE 293

Query: 300 QQFAKYRELSPKKFEVDGYLRTPLSRMKIF 329
           +QF K+R L PK      Y    +   K+F
Sbjct: 294 KQFEKFRRLVPKNHPYREYFMDNMVASKLF 323

[Close]

BLAST of HG10009617 vs. TAIR 10
Match: AT4G39470.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 137.1 bits (344), Expect = 2.6e-32
Identity = 92/285 (32.28%), Postives = 156/285 (54.74%), Query Frame = 0


Query: 34  KNLRFAAPLSRNSVSVHPFRVRASSVPVHSNHPVVQCLRNYARAAILIGAAATMVGKFSH 93
           K+  FA  L++      P  +  SS  + S+   VQ L    +AAIL+  +   +G  S 
Sbjct: 42  KSRPFAPRLAQPDNFAPPLPLIRSSTSLLSSKDFVQMLAR--KAAILLVGSFVFLGFCSS 101

Query: 94  LPARAESPAAVAEEDQRIVEDSEQDGKQSSPLNDFLESNSEAFEALKSLLQQKLENGEDE 153
            PA A   A V  + +  +ED +   K        LE+  E  EA+K+++ +K+  G++E
Sbjct: 102 KPALALPTATVVSQAE--LEDEKMFEK-------LLENEPENMEAMKAVVYKKMRRGKNE 161

Query: 154 EALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALL 213
           +A+K +++L+  +P   EWK L A     MG+   A+ ++++IL   PL   AL   A++
Sbjct: 162 DAVKYVEKLMKLEPHEVEWKLLEALCYETMGELSKAKRLYKDILKEQPLLIRALHGLAMV 221

Query: 214 MDRCGEGEAVLRRLEEALRIAENENKAKEARDVRLIMAQIQFLQKNVEEALKSYKELAKE 273
           M +  +  +V   L EA+ +A   N+  E R++++++ Q+  ++   EE LK ++++  +
Sbjct: 222 MHKTHD-TSVFDMLIEAMEVARQGNRVTEERNIQVLIGQMHIVEGQFEEGLKIFQQMVND 281

Query: 274 DPNDFRPYFCQGMIYSLLDKNVEAKQQFAKYRELSPKKFEVDGYL 319
           +P DFRPY CQG++YSL+DK  EA QQF  Y  L P +F   G+L
Sbjct: 282 NPRDFRPYLCQGIVYSLMDKKEEAAQQFEIYWSLVPGEFPQKGFL 314

[Close]

BLAST of HG10009617 vs. TAIR 10
Match: AT3G53560.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 132.1 bits (331), Expect = 8.2e-31
Identity = 99/322 (30.75%), Postives = 168/322 (52.17%), Query Frame = 0


Query: 20  FNFNASKSKSVSLPKNL-----RFAAPLSRNSVSVHPFRVRASSVPVHSNHPVVQCLRNY 79
           F+ + + + S + PKNL     +  + L   S+     + + S  P+  + P     R +
Sbjct: 14  FHLSFTHTSSSTFPKNLFKSSIQPISSLKSASIKASSSKFQNSITPLPKSTP----FRLF 73

Query: 80  ARAAILIGAAATMVGKFSHLPARA-----ESPAAVAEEDQRIVEDSEQDGKQSSPLNDFL 139
               I +  AA ++    HL + A       P +V  ++   +E+ E+       L++ L
Sbjct: 74  KSTCITLTTAAALLLANLHLKSPAIAAPIAPPPSVESKENVTLEEEER------ALDEHL 133

Query: 140 ESNSEAFEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENA 199
            ++    +AL+SL++ K+++ +  EA++++ +L+  +P   EW  L A +    G  + A
Sbjct: 134 ITHPSDVDALRSLMEVKIKSRKLTEAVEVIDRLIKLEPEEKEWPVLKANIFTYSGDLDLA 193

Query: 200 RDVFEEILAVNPLSFEALFENALLMDRCGEG---EAVLRRLEEALRIAENENKAKEARDV 259
           +  FEEILA +PL  EA   + LLM     G   + V  R+EEA+   + EN   + RD 
Sbjct: 194 KTGFEEILAKDPLRVEAY--HGLLMAYSDAGLDLKEVESRIEEAMLKCKKENNQNDFRDF 253

Query: 260 RLIMAQIQFLQKNVEEALKSYKELAKEDPNDFRPYFCQGMIYSLLDKNVEAKQQFAKYRE 319
           +L++AQI+ ++    EALK Y+EL KE+P DFRPY CQG+IY+LL K  +A++QF  +R+
Sbjct: 254 KLLVAQIRVIEGKHSEALKLYQELVKEEPRDFRPYLCQGIIYTLLKKKDKAEEQFDNFRK 313

Query: 320 LSPKKFEVDGYLRTPLSRMKIF 329
           L PK      Y    +   K+F
Sbjct: 314 LVPKNHPYREYFMDNMIATKLF 323

[Close]

BLAST of HG10009617 vs. TAIR 10
Match: AT5G02590.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 127.5 bits (319), Expect = 2.0e-29
Identity = 91/254 (35.83%), Postives = 142/254 (55.91%), Query Frame = 0


Query: 84  AATMVGKFSHLPARAESPAAVAEEDQRIVEDSEQDGKQSSPLNDFLESNSEAFEALKSLL 143
           AAT+V      P    S AA    DQ  +    ++ ++ + L   L  N    EAL+SL+
Sbjct: 84  AATLVS-----PPPPPSTAADLTSDQ--ISSRPKEEEEEAALEKHLTKNPNDVEALQSLM 143

Query: 144 QQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDVFEEILAVNPLS 203
           + K +    + AL+IL +L+  QP   EW+ L A++    G  ++A   FEE+L+ +P  
Sbjct: 144 KIKFQTKNIDHALEILNRLIEIQPEEQEWRILKAQVQTYGGDFDSATKGFEEVLSKDPFR 203

Query: 204 FEALFENALLMDRCGEGEAVL----RRLEEALRIAENENKAKEARDVRLIMAQIQFLQKN 263
            EA   + L+M    E E+ L     R+ EA+   + ENK K+ RD  L++AQI+ ++ N
Sbjct: 204 VEAY--HGLVM-AYSESESKLSEIESRINEAIEKCKKENK-KDFRDFMLLIAQIRVIKGN 263

Query: 264 VEEALKSYKELAKEDPNDFRPYFCQGMIYSLLDKNVEAKQQFAKYRELSPKKFEVDGYL- 323
             EAL+ Y+EL K++P DFRPY CQG+IY+L+ K  EA++QFA++R L P+      YL 
Sbjct: 264 PIEALRVYQELVKDEPKDFRPYLCQGLIYTLMKKKDEAEKQFAEFRRLVPENHPYKEYLD 323

Query: 324 RTPLSRMKIFGSDE 333
              L+  K+F  ++
Sbjct: 324 ANVLNTNKLFAKNQ 326

The following BLAST results are available for this feature:

BLAST of HG10009617 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876236.1	2.9e-163	92.92	protein SLOW GREEN 1, chloroplastic [Benincasa hispida]	[more]
XP_008466719.1	3.2e-154	88.34	PREDICTED: protein SLOW GREEN 1, chloroplastic [Cucumis melo]	[more]
TYJ97188.1	9.4e-154	88.05	protein SLOW GREEN 1 [Cucumis melo var. makuwa]	[more]
XP_004149472.1	2.1e-153	87.54	protein SLOW GREEN 1, chloroplastic [Cucumis sativus] >KAE8648295.1 hypothetical...	[more]
XP_022146470.1	2.7e-153	89.15	protein SLOW GREEN 1, chloroplastic [Momordica charantia]	[more]

BLAST of HG10009617 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LS48	1.1e-96	62.77	protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 ...	[more]
O06917	5.2e-06	26.75	TPR repeat-containing protein MJ0263 OS=Methanocaldococcus jannaschii (strain AT...	[more]
Q3UV71	1.3e-04	22.22	Protein O-mannosyl-transferase TMTC1 OS=Mus musculus OX=10090 GN=Tmtc1 PE=2 SV=2	[more]

BLAST of HG10009617 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CRV7	1.6e-154	88.34	protein SLOW GREEN 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103504062 PE=4...	[more]
A0A5D3BG83	4.5e-154	88.05	Protein SLOW GREEN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174...	[more]
A0A6J1CXB6	1.3e-153	89.15	protein SLOW GREEN 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1110156...	[more]
A0A6J1GYL7	6.0e-146	86.73	protein SLOW GREEN 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11145845...	[more]
A0A0A0KMW6	7.3e-144	88.29	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G114590 ...	[more]

BLAST of HG10009617 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18420.1	7.8e-98	62.77	Protein prenylyltransferase superfamily protein	[more]
AT2G37400.1	2.3e-33	36.67	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G39470.1	2.6e-32	32.28	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G53560.1	8.2e-31	30.75	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G02590.1	2.0e-29	35.83	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 133..153
None	No IPR available	COILS	Coil	Coil	coord: 217..244
None	No IPR available	COILS	Coil	Coil	coord: 253..273
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..127
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 87..332
None	No IPR available	PANTHER	PTHR26312:SF138	PROTEIN SLOW GREEN 1, CHLOROPLASTIC	coord: 87..332
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 136..169 e-value: 380.0 score: 1.1 coord: 278..311 e-value: 110.0 score: 5.9 coord: 170..203 e-value: 46.0 score: 9.1 coord: 244..277 e-value: 2.3 score: 17.2
IPR019734	Tetratricopeptide repeat	PFAM	PF13174	TPR_6	coord: 174..202 e-value: 0.11 score: 13.2 coord: 245..276 e-value: 0.011 score: 16.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 245..319 e-value: 3.5E-9 score: 38.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 69..244 e-value: 5.2E-14 score: 54.1
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 130..311

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10009617.1	HG10009617.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
molecular_function	GO:0005515	protein binding