HG10009612 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10009612
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3
Location	Chr06: 8176305 .. 8181190 (-)
RNA-Seq Expression	HG10009612
Synteny	HG10009612

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGACGTTCCACTGTCACTACAATCATGTTCGAAGACTGTTATACTTGTTTGTACATTTCTTACCTAAAAGTCCTTTATTTCAATAGAAATTAACAATTATGCTTTCAGACCCGCATGCTATGAATCTGATTGCTTGCCTTTCTTCTACCTAAAGACATTGATTGGTTTGTTATGATTCCTTCATGAATTATGATGTCTCTTGGGGATCCAAAGGAGGAGACAATCAATTATTAGTATGTGAGGTTGACTCCATATTGCCTATTATGATAACAGCTTCATCTTTTTCTGGCTTTTCTCTTGCAATCAGCAAAGTTTTATGACAGAACTATATTACAAAGAAGAAAGCGGTTCAATCTAGAAACAAAAAAATATCTTTAGAGATATCATGTAGTTGGGCGCTTTAGACGAGGGGAATAATATTTTATCGAACAATTCTTCCTAAAGAAGTATGTAAAATTGTAGTTTGGGTTACGAATACGATAAGAAATGGGGAGATTTGGGATATTTCTTAAGAGGAACTTTGGAAGCAAAGGTGCAGATCTAATTGGTTGAGGCTCATTTTTCTTCCTTAGTTACTCTTCTTGGTGTGCACTAAATTGATTGAGCCTCTGTCACCATTTAGCTAGCTAGACAAGCCTCGTTTTTCTTCTTTAAATATGCCAAATTGAAACCTCCACACTTCAAGGGCTTGGAAACAATATGCCACCCTGTAAAGTGTTTTAGTTTTCCTTCTTAAAAAAAGGTGTTTTAATTTTCCTTCCCTATACTTTCCCCCAAAAAAATCTCACTTTTCTCATAAGTTAAAGAATAATTATCTTGAGCACGGGAATAAAGATCTGTAATACAAGGGAAGATTAGAAAGAACCAAATAACAAAGAGTTAATACCCCCTCTTGAAAGCAATTGTTTTTTTCCATCCATCCAATTTTCACCCTAGGCAAGGCATGGGAAGTGTTACAAATTTACATCACAAACAAGTAGCAGCGCCCTCAAATCTTTTGAGGCCTACATTTGCCTCTTTAAGAGAAAAAGCTTCAAGGCCGCCTTTATTTTTTTCCTAAACATTACTTTTAAATCTTTTTTTCAGACTCTCCCGCTTTGTTAGATATTTTTTTTTATTTTTTTATTTTTTAAATAAAAAATTAAATGAGGTTTACAATAGTATTCAGAAAGGGTGTGGGAAAAATCAAGTTAGCCTTTGGTCTGTTATCCTTTGAAGGTTAGCCCAAATGAGAATCTGCAGGCTAGGCGGCCCTAGAGGAAACTACCTTACTTGAACAGATCTGTTCTATAGCTATACAACTGCATTCTTGAGTTCTAAGGCAGCCCTAGAGGATGTTTACTTGAGCTGATATGTTTTATGTAAATGAGCTTGAGAGGCTACTCATTTATATATGGGTTGCTCCTGCACAAGCATTCTTTGTAGGATGATTATGGCTGTTATGGCCTTTGGGTCTTTTCCTCTCTTATCCCGACGGTCTTTAGGAAGTTCTGCAGGACTGTCCTTGTTGTCTTTCTCAGGAAGGAAGAGAGTTTATTATATATATATTTTTTAGCATAATGGTGGGAAGTTTCATTATTGGGACTTGGGAGTCTGTCCTGAGCATGACCAAAGAATTCCTTAGATATGGAGATAGCTCTGGAGAAAATCTGAGAAAATATAGTTTCTGTTACCTCCTCTTTGAGATCTACTGCCTCGAGTTTTGGAACTACCACACTCGACTCTTTTTGCACATTTCAGCTTTCATTTAAAAAATTGGTTTCTAAAAATTGTTAAACAGGAAAACTACGCAATTTTTGAATGACTTATTCATTTTTTATCATAGGAAAAATACTGTGATTGTCTTATAGTAGGGTTTTCATGGAATTCATATTATCCTTAATCTAACAATTCCACCAATTCCTATTTATGTCATTTTTAGGTGGTTAGTGCTGGATATGGCTTTGATTACTCTGCAGCTGTTGATATCCTTAGAACCATAAGATCTGCAAATGGATTTACTGTTACAATTGTCTTAAAACCTTTTAGCTTTGAAGGGAAAAGGCGCCAGGATGAGGTAGTGAATGACATGCAGCTTATGCTAAAAATATCCTTGTAATAATCATGCATCTTGCAACTTACAAAATTCTTCTATTTTTCATATATTGAGGTTACTGTAATTGATGTGCGTCCAAAAGATATTATTTCTGAAGATACTAATGATCAAGCCAATTTCAGGTTAAACATTTGGTAGGAAGGCTAAAGGAACATACGAGCTTCTTAATTGGTGAGTTATGATTAAATGAGAGAACTTAAAAGACTTGAACTCGTACGTATTTTCTCTTCACTTAAATTGAAAAGGTGAGGGGTATGTCTTGTCCTTGGATCCTGGCATTTTTGATAGGAGCCTAGGGTTCAATATCCTTTTGGGAAGAGTTGGTCAAGCATGAGAGAAAGCATGGTGTTTTGTAGCCGGGATAGTTTCCTTTTCTCCAAGGAGTGGTCAGAGTCCTTCCCAAATCTTAGACAAGCTATGGGCCTAGGTTTACTCAGAACATTGGCCCATCAGAGTCCCAACTCCAGAAGGATTTCATGGGGGCTGGTCCATTCAGGTTTGAGAATTTTTGGCTGGACCATCCTTTTAAGGCGTCCTTACCCTTGTGGGGAGTGAGGTGGAAGGTAAATTGGAAGTATTTCACTTTTTAAGGAGGTGTTGAACAGTTGAAGCCTCTTTAACAAGTGAAATACTTTGCAGAGGACCCCACTTGGTCAAGTGGGAGGAGAATACTTTGCAGAGGACCCCACTTGGTCAAGTGGGAGGAGGTGGAAGCCTGTGGATCTAAAAGGTTAAGGAACTGGGAGCTTAATACTACGTAATGAAGGCCTTATTGGTGAAGTGGTTGCATTTTCACTTTTTAAGGAGGTGTTGAACAGTTGAAGCCTCTTTAACAAGTGAAATACTTTGCAGAGGACCCCACTTGGTCAAGTGGGAGGAGGTGGAAGCCTGTGGATCTAAAAGGTTAAGGAACTGGGAGCTTAATACTACGTAATGAAGGCCTTATTGGTGAAGTGGTTGCATTACTTCATGGAGTCTGACACATTATGGTTTAGGGTGATAGCTAGTCTTATATTAAATAAAAAAAAAAAAAAAGATAGCTAGTAGGAAGACTCTCATCCTTTTGAGTGGGGTACAAGTATTGATTCGAGGGACCTTAGCAAAAATCTTTGTAAAAACTATTTCCTCTAGATTTCCTTTTTTCCTATGCATTCACTATTAATTATGTTGGGAAGGATTGAATATTTATTTTTGGGAGGATCACTGTGTAGGGGATAAGCCTTTGTGTGCTTTGTTTAAGTGATTATACCATCTTTCGAATAAAAGGCTGCATCTTGTGGTCTGTTGTTGCCTTCTTAGATCCTTCTTCAATTTCCTTAGGCTTCTCGTGCCCTTTGTCCGATAGAGAGGTGTTGGAAATGGCAGGTCTTCTTTCTCTTATCTGAGACCAACATGCGATTCCTAGAACAAGAGCTGTTAGGATTTGGTCTCCCTGCTTCTAGGTGATTCTCTTGTCGTTCCTTTTTGCATATCTTATTTACTCTCTCTCCCTCCCCTATATTTGCCTTCACTTTTTCCTCAATTTGGAAGGTTAAAATTCCAAGGAATGTTAAGGCATTTGCATGGCAGGTTTTACATGGGAGAGTTTCAGTTAACATCATGGATTGTGTTTAGAGACATTCTTTCTATGTTTTGTACATGCAATTGTGCATTTTCTGCATGACGCATGAAGAGGACCTTAATAATTTGTTTTGGAATTGTCAGTTTGCTAAATTCCTTTGGAGTCATGGGTTGAGATCATCTAGTGTTTGTTGGGTTCGGAATAGAGCTGAGAGGGTTTTGTTGGGGTATTTGCTTTTAAATTCTCCCGTTAGACAAGTTTTGTGGCCAATTAGTTTCTTTGCCATTTTGTGAGAATTTGGCTTAGAGAAATAATATACTTTTTTTTAGAGACATTGGGTGTGGAGGTTTGGGGAGGTGGCTAGGTTTAATGCCTCCTTGTGGGGTTGGTCACTATTATTATGAGTTGGTCTTATCTTTGGATTGAAGTCTTTTATGTAGTTTGGGTCAAACTTCATTTTGTCCTTTTTTTTTCCCTCTTCCCTATGCCCTTGTCTTTTCTTTCATTTCGCTTAGTGAAAGCGTAACTTTTGGGAAGGGTGATCTAAACAAAATATTGATTTCATTTAGGGAAAACTATGACCACTTTATCCCATCTTTTCACACACAGATATTGACACCGATAGACTACTTGAAAAGGACTTGGTGACTCTTGATGAGGCTGTGAGATCTGCAAATAATGCTGTCTTGTTGGCTATAAATTCGGTATCCATTGTCAAGTCTGTATGTTCACCTTGTCTGCCATTCATTTGGTTTTAAAATTTCAACTGCTTTCTTTTGACGTATTATATCTTGAATATATCAGGAGATGTTAATAAAGTTTGTAGATGAACCTCAAAATGATGTGAAAGAGCTTGATGTTATAGACGTCATGGAAGTAAGTTTCCTCAATTTTATTTTGAGTTGGAAATTTGTTGCTTCTGGTGTCTCATTTGTTTCTTGGTTATGTTCATTGTTATATTTCTTAGTTCAGACTGTTTATGAAGATTATTGGTAAAAAATTAAAAATAAAAAGATCCAGAGAGAAGATACTTATCTTGGTCCTTTGCTTATATTCAGTCTATATATTTATGAAGAGGAGTTCTGGAATCCAGCATGAGCCAAGATGTCTAAAGGAAATGGCACTTGTCTTGGTGAAAGAGGGAGGAGCTAATCTTCTCTCCTTCATATGGTATTCCCTCTTGAGAATGGATAGAGATGAGAAGTTTAATGCAGAATGGAGATAA

mRNA sequence

ATGATTGACGTTCCACTGTCACTACAATCATGTTCGAAGACTGTTATACTTGTGGTTAGTGCTGGATATGGCTTTGATTACTCTGCAGCTGTTGATATCCTTAGAACCATAAGATCTGCAAATGGATTTACTGTTACAATTGTCTTAAAACCTTTTAGCTTTGAAGGGAAAAGGCGCCAGGATGAGAGGACCCCACTTGGTCAAGTGGGAGGAGAATACTTTGCAGAGGACCCCACTTGGTCAAGTGGGAGGAGGTGGAAGCCTGTGGATCTAAAAGATATTGACACCGATAGACTACTTGAAAAGGACTTGGTGACTCTTGATGAGGCTGTGAGATCTGCAAATAATGCTGTCTTGTTGGCTATAAATTCGGTATCCATTGTCAAGTCTGAGATGTTAATAAAGTTTGTAGATGAACCTCAAAATGATGTGAAAGAGCTTGATGTTATAGACGTCATGGAAAGGAGTTCTGGAATCCAGCATGAGCCAAGATGTCTAAAGGAAATGGCACTTGTCTTGGTGAAAGAGGGAGGAGCTAATCTTCTCTCCTTCATATGGTATTCCCTCTTGAGAATGGATAGAGATGAGAAGTTTAATGCAGAATGGAGATAA

Coding sequence (CDS)

ATGATTGACGTTCCACTGTCACTACAATCATGTTCGAAGACTGTTATACTTGTGGTTAGTGCTGGATATGGCTTTGATTACTCTGCAGCTGTTGATATCCTTAGAACCATAAGATCTGCAAATGGATTTACTGTTACAATTGTCTTAAAACCTTTTAGCTTTGAAGGGAAAAGGCGCCAGGATGAGAGGACCCCACTTGGTCAAGTGGGAGGAGAATACTTTGCAGAGGACCCCACTTGGTCAAGTGGGAGGAGGTGGAAGCCTGTGGATCTAAAAGATATTGACACCGATAGACTACTTGAAAAGGACTTGGTGACTCTTGATGAGGCTGTGAGATCTGCAAATAATGCTGTCTTGTTGGCTATAAATTCGGTATCCATTGTCAAGTCTGAGATGTTAATAAAGTTTGTAGATGAACCTCAAAATGATGTGAAAGAGCTTGATGTTATAGACGTCATGGAAAGGAGTTCTGGAATCCAGCATGAGCCAAGATGTCTAAAGGAAATGGCACTTGTCTTGGTGAAAGAGGGAGGAGCTAATCTTCTCTCCTTCATATGGTATTCCCTCTTGAGAATGGATAGAGATGAGAAGTTTAATGCAGAATGGAGATAA

Protein sequence

MIDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQDERTPLGQVGGEYFAEDPTWSSGRRWKPVDLKDIDTDRLLEKDLVTLDEAVRSANNAVLLAINSVSIVKSEMLIKFVDEPQNDVKELDVIDVMERSSGIQHEPRCLKEMALVLVKEGGANLLSFIWYSLLRMDRDEKFNAEWR

Homology

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BLAST of HG10009612 vs. NCBI nr
Match: XP_011654532.1 (protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 [Cucumis sativus] >KAE8648293.1 hypothetical protein Csa_017789 [Cucumis sativus])

HSP 1 Score: 206.1 bits (523), Expect = 2.9e-49
Identity = 119/155 (76.77%), Postives = 126/155 (81.29%), Query Frame = 0


Query: 1   MIDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQ 60
           MIDVPLSLQSCSK VILVVSAGYGFDYSAAVD+LRTIRSANGFTVTIVLKPFSFEGKRRQ
Sbjct: 140 MIDVPLSLQSCSKAVILVVSAGYGFDYSAAVDMLRTIRSANGFTVTIVLKPFSFEGKRRQ 199

Query: 61  DERTPLGQVGGEYFAEDPTWSSGRRWKPVD-LKDIDTDRLLEKDLVTLDEAVRSANNAVL 120
           DE   L                GR  +    L DIDTDRLLEKDLVTLD+AVRSANNAVL
Sbjct: 200 DEVKRL---------------VGRLKEHTSFLIDIDTDRLLEKDLVTLDDAVRSANNAVL 259

Query: 121 LAINSVSIVKSEMLIKFVDEPQNDVKELDVIDVME 155
           LAINS+SIVKSEM+IKFVDEPQND+KEL  +DVME
Sbjct: 260 LAINSMSIVKSEMIIKFVDEPQNDLKELGAMDVME 279

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BLAST of HG10009612 vs. NCBI nr
Match: XP_022992937.1 (protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 [Cucurbita maxima])

HSP 1 Score: 204.5 bits (519), Expect = 8.5e-49
Identity = 118/154 (76.62%), Postives = 126/154 (81.82%), Query Frame = 0


Query: 1   MIDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQ 60
           MIDVPLSLQSCSK VILVVSAGYG DYSAAVDILRT+RSANGFTVTIVLKPFSFEG+RRQ
Sbjct: 136 MIDVPLSLQSCSKAVILVVSAGYGLDYSAAVDILRTVRSANGFTVTIVLKPFSFEGQRRQ 195

Query: 61  DERTPLGQVGGEYFAEDPTWSSGRRWKPVDLKDIDTDRLLEKDLVTLDEAVRSANNAVLL 120
           DE   L  VG     E  ++          L DIDTDRLLEKDLVTLDEAVRSANNAVL+
Sbjct: 196 DEVKHL--VGS--LKEHTSF----------LIDIDTDRLLEKDLVTLDEAVRSANNAVLM 255

Query: 121 AINSVSIVKSEMLIKFVDEPQNDVKELDVIDVME 155
           AINS+SI+KSEML KF+DEPQN VKEL VIDVME
Sbjct: 256 AINSISIIKSEMLTKFIDEPQNSVKELGVIDVME 275

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BLAST of HG10009612 vs. NCBI nr
Match: XP_038907181.1 (protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 [Benincasa hispida])

HSP 1 Score: 204.1 bits (518), Expect = 1.1e-48
Identity = 120/154 (77.92%), Postives = 123/154 (79.87%), Query Frame = 0


Query: 2   IDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQD 61
           ID+PL LQSCSK VILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQD
Sbjct: 137 IDIPLPLQSCSKAVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQD 196

Query: 62  ERTPLGQVGGEYFAEDPTWSSGRRWKPVD-LKDIDTDRLLEKDLVTLDEAVRSANNAVLL 121
           E   L                GR  +    L DIDTDRLLEKDLVTLDEAVRSANNAVLL
Sbjct: 197 EVKHL---------------VGRLKEHTSFLIDIDTDRLLEKDLVTLDEAVRSANNAVLL 256

Query: 122 AINSVSIVKSEMLIKFVDEPQNDVKELDVIDVME 155
           AINS+SIVKSEMLIK V EPQNDVKEL VIDVME
Sbjct: 257 AINSMSIVKSEMLIKLVHEPQNDVKELGVIDVME 275

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BLAST of HG10009612 vs. NCBI nr
Match: KAG7016680.1 (Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 204.1 bits (518), Expect = 1.1e-48
Identity = 117/155 (75.48%), Postives = 124/155 (80.00%), Query Frame = 0


Query: 1   MIDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQ 60
           MIDVPLSLQSCSK VILVVSAGYG DYSAAVDILRT+RSANGFTVTIVLKPFSFEG+RRQ
Sbjct: 136 MIDVPLSLQSCSKAVILVVSAGYGLDYSAAVDILRTVRSANGFTVTIVLKPFSFEGQRRQ 195

Query: 61  DERTPLGQVGGEYFAEDPTWSSGRRWKPVD-LKDIDTDRLLEKDLVTLDEAVRSANNAVL 120
           DE   L                GR  +    L DIDTDRLLEKDLVTLDEAVRSANNAVL
Sbjct: 196 DEVKHL---------------VGRLQEHTSFLIDIDTDRLLEKDLVTLDEAVRSANNAVL 255

Query: 121 LAINSVSIVKSEMLIKFVDEPQNDVKELDVIDVME 155
           +AINS+SI+KSEML KF+DEPQN VKEL VIDVME
Sbjct: 256 MAINSISIIKSEMLAKFIDEPQNSVKELGVIDVME 275

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BLAST of HG10009612 vs. NCBI nr
Match: XP_023550462.1 (protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 203.8 bits (517), Expect = 1.5e-48
Identity = 117/155 (75.48%), Postives = 124/155 (80.00%), Query Frame = 0


Query: 1   MIDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQ 60
           MIDVPLSLQSCSK VILVVSAGYG DYSAAVDILRT+RSANGFTVTIVLKPFSFEG+RRQ
Sbjct: 136 MIDVPLSLQSCSKAVILVVSAGYGLDYSAAVDILRTVRSANGFTVTIVLKPFSFEGQRRQ 195

Query: 61  DERTPLGQVGGEYFAEDPTWSSGRRWKPVD-LKDIDTDRLLEKDLVTLDEAVRSANNAVL 120
           DE   L                GR  +    L DIDTDRLLEKDLVTLDEAVRSANNAVL
Sbjct: 196 DEVKHL---------------VGRLKEHTSFLIDIDTDRLLEKDLVTLDEAVRSANNAVL 255

Query: 121 LAINSVSIVKSEMLIKFVDEPQNDVKELDVIDVME 155
           +AINS+SI+KSEML KF+DEPQN VKEL VIDVME
Sbjct: 256 MAINSISIIKSEMLTKFIDEPQNSVKELGVIDVME 275

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BLAST of HG10009612 vs. ExPASy Swiss-Prot
Match: Q6F6B5 (Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 OS=Arabidopsis thaliana OX=3702 GN=ARC3 PE=1 SV=2)

HSP 1 Score: 97.4 bits (241), Expect = 1.9e-19
Identity = 62/145 (42.76%), Postives = 85/145 (58.62%), Query Frame = 0


Query: 8   LQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQDERTPLG 67
           LQS  +  ILV SAGYG D   A++IL  +RS     V ++LKPFSFEG++R +E   L 
Sbjct: 138 LQSRPRAFILVASAGYGSDQVEAINILSAVRSGGNLAVAVLLKPFSFEGRKRLEEVNELA 197

Query: 68  QVGGEYFAEDPTWSSGRRWKPVDLKDIDTDRLLEKDLVTLDEAVRSANNAVLLAINSVSI 127
           +   ++                   DID + LL+KDLVTLDEA+R+ANNAV +AIN+ S 
Sbjct: 198 RKLQQH--------------TNFCIDIDIEVLLQKDLVTLDEALRNANNAVSMAINAASA 257

Query: 128 VKSEMLIKFVDEPQNDVKELDVIDV 153
           + S M   F+D    D+KEL+  +V
Sbjct: 258 LISGMHGNFIDVMHKDLKELEGSEV 268

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BLAST of HG10009612 vs. ExPASy TrEMBL
Match: A0A6J1JRB9 (protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 OS=Cucurbita maxima OX=3661 GN=LOC111489118 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 4.1e-49
Identity = 118/154 (76.62%), Postives = 126/154 (81.82%), Query Frame = 0


Query: 1   MIDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQ 60
           MIDVPLSLQSCSK VILVVSAGYG DYSAAVDILRT+RSANGFTVTIVLKPFSFEG+RRQ
Sbjct: 136 MIDVPLSLQSCSKAVILVVSAGYGLDYSAAVDILRTVRSANGFTVTIVLKPFSFEGQRRQ 195

Query: 61  DERTPLGQVGGEYFAEDPTWSSGRRWKPVDLKDIDTDRLLEKDLVTLDEAVRSANNAVLL 120
           DE   L  VG     E  ++          L DIDTDRLLEKDLVTLDEAVRSANNAVL+
Sbjct: 196 DEVKHL--VGS--LKEHTSF----------LIDIDTDRLLEKDLVTLDEAVRSANNAVLM 255

Query: 121 AINSVSIVKSEMLIKFVDEPQNDVKELDVIDVME 155
           AINS+SI+KSEML KF+DEPQN VKEL VIDVME
Sbjct: 256 AINSISIIKSEMLTKFIDEPQNSVKELGVIDVME 275

[Close]

BLAST of HG10009612 vs. ExPASy TrEMBL
Match: A0A6J1FFA3 (protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 OS=Cucurbita moschata OX=3662 GN=LOC111445197 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 2.7e-48
Identity = 116/155 (74.84%), Postives = 124/155 (80.00%), Query Frame = 0


Query: 1   MIDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQ 60
           MIDVPLSLQSCSK VILVVSAGYG DYSAAVDILRT+RSANGFTVTIVLKPFSFEG+RRQ
Sbjct: 136 MIDVPLSLQSCSKAVILVVSAGYGLDYSAAVDILRTVRSANGFTVTIVLKPFSFEGQRRQ 195

Query: 61  DERTPLGQVGGEYFAEDPTWSSGRRWKPVD-LKDIDTDRLLEKDLVTLDEAVRSANNAVL 120
           DE   L                GR  +    L DIDTDRLLEKDLVTLDEAVRSAN+AVL
Sbjct: 196 DEVKHL---------------VGRLKEHTSFLIDIDTDRLLEKDLVTLDEAVRSANSAVL 255

Query: 121 LAINSVSIVKSEMLIKFVDEPQNDVKELDVIDVME 155
           +AINS+SI+KSEML KF+DEPQN VKEL VIDVME
Sbjct: 256 MAINSISIIKSEMLTKFIDEPQNSVKELGVIDVME 275

[Close]

BLAST of HG10009612 vs. ExPASy TrEMBL
Match: A0A1S3CRX6 (protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504079 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 6.0e-48
Identity = 117/155 (75.48%), Postives = 124/155 (80.00%), Query Frame = 0


Query: 1   MIDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQ 60
           MIDVPLSL SC K VILVVSAGYGFDY AAVD+LRTIRSANGFTVTIVLKPFSFEGKRRQ
Sbjct: 138 MIDVPLSLLSCPKAVILVVSAGYGFDYLAAVDMLRTIRSANGFTVTIVLKPFSFEGKRRQ 197

Query: 61  DERTPLGQVGGEYFAEDPTWSSGRRWKPVD-LKDIDTDRLLEKDLVTLDEAVRSANNAVL 120
           DE   L                GR  +    L DIDTDRLLEKDLVTLD+AVRSANNAVL
Sbjct: 198 DEVKHL---------------VGRLKEHTSFLIDIDTDRLLEKDLVTLDDAVRSANNAVL 257

Query: 121 LAINSVSIVKSEMLIKFVDEPQNDVKELDVIDVME 155
           LAINS+SIVKSEM+IKFVDEPQND+KEL V+DVME
Sbjct: 258 LAINSMSIVKSEMIIKFVDEPQNDLKELGVMDVME 277

[Close]

BLAST of HG10009612 vs. ExPASy TrEMBL
Match: A0A1S3CS57 (protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103504079 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 6.0e-48
Identity = 117/155 (75.48%), Postives = 124/155 (80.00%), Query Frame = 0


Query: 1   MIDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQ 60
           MIDVPLSL SC K VILVVSAGYGFDY AAVD+LRTIRSANGFTVTIVLKPFSFEGKRRQ
Sbjct: 138 MIDVPLSLLSCPKAVILVVSAGYGFDYLAAVDMLRTIRSANGFTVTIVLKPFSFEGKRRQ 197

Query: 61  DERTPLGQVGGEYFAEDPTWSSGRRWKPVD-LKDIDTDRLLEKDLVTLDEAVRSANNAVL 120
           DE   L                GR  +    L DIDTDRLLEKDLVTLD+AVRSANNAVL
Sbjct: 198 DEVKHL---------------VGRLKEHTSFLIDIDTDRLLEKDLVTLDDAVRSANNAVL 257

Query: 121 LAINSVSIVKSEMLIKFVDEPQNDVKELDVIDVME 155
           LAINS+SIVKSEM+IKFVDEPQND+KEL V+DVME
Sbjct: 258 LAINSMSIVKSEMIIKFVDEPQNDLKELGVMDVME 277

[Close]

BLAST of HG10009612 vs. ExPASy TrEMBL
Match: A0A6J1CZD7 (protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 OS=Momordica charantia OX=3673 GN=LOC111015661 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 1.2e-45
Identity = 114/157 (72.61%), Postives = 126/157 (80.25%), Query Frame = 0


Query: 1   MIDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQ 60
           M+DVPLSLQSCSK VILVVSAGYG DYSAAVDILRTIRSANGFTVTIVLKPFSFEG+RRQ
Sbjct: 131 MVDVPLSLQSCSKAVILVVSAGYGLDYSAAVDILRTIRSANGFTVTIVLKPFSFEGQRRQ 190

Query: 61  DERTPLGQVGGEYFAEDPTWSSGRRWKPVDLKDIDTDRLLEKDLVTLDEAVRSANNAVLL 120
           DE   L  VG     E  ++          L DIDT RLLEKDLVTLDEAVRSANNAVLL
Sbjct: 191 DEVKHL--VGS--LKEHTSF----------LIDIDTKRLLEKDLVTLDEAVRSANNAVLL 250

Query: 121 AINSVSIVKSEMLIKFVDEPQNDVKEL---DVIDVME 155
           AINS+SI+KSE LIKF++EPQND+KEL   +VI ++E
Sbjct: 251 AINSISIIKSETLIKFINEPQNDLKELGAREVIGILE 273

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BLAST of HG10009612 vs. TAIR 10
Match: AT1G75010.1 (GTP binding )

HSP 1 Score: 97.4 bits (241), Expect = 1.4e-20
Identity = 62/145 (42.76%), Postives = 85/145 (58.62%), Query Frame = 0


Query: 8   LQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQDERTPLG 67
           LQS  +  ILV SAGYG D   A++IL  +RS     V ++LKPFSFEG++R +E   L 
Sbjct: 138 LQSRPRAFILVASAGYGSDQVEAINILSAVRSGGNLAVAVLLKPFSFEGRKRLEEVNELA 197

Query: 68  QVGGEYFAEDPTWSSGRRWKPVDLKDIDTDRLLEKDLVTLDEAVRSANNAVLLAINSVSI 127
           +   ++                   DID + LL+KDLVTLDEA+R+ANNAV +AIN+ S 
Sbjct: 198 RKLQQH--------------TNFCIDIDIEVLLQKDLVTLDEALRNANNAVSMAINAASA 257

Query: 128 VKSEMLIKFVDEPQNDVKELDVIDV 153
           + S M   F+D    D+KEL+  +V
Sbjct: 258 LISGMHGNFIDVMHKDLKELEGSEV 268

The following BLAST results are available for this feature:

BLAST of HG10009612 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654532.1	2.9e-49	76.77	protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 [Cucumis sativus] >KAE864...	[more]
XP_022992937.1	8.5e-49	76.62	protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 [Cucurbita maxima]	[more]
XP_038907181.1	1.1e-48	77.92	protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 [Benincasa hispida]	[more]
KAG7016680.1	1.1e-48	75.48	Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 [Cucurbita argyrosperma s...	[more]
XP_023550462.1	1.5e-48	75.48	protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 [Cucurbita pepo subsp. pe...	[more]

BLAST of HG10009612 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6F6B5	1.9e-19	42.76	Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 OS=Arabidopsis thaliana O...	[more]

BLAST of HG10009612 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JRB9	4.1e-49	76.62	protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 OS=Cucurbita maxima OX=36...	[more]
A0A6J1FFA3	2.7e-48	74.84	protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 OS=Cucurbita moschata OX=...	[more]
A0A1S3CRX6	6.0e-48	75.48	protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 isoform X1 OS=Cucumis mel...	[more]
A0A1S3CS57	6.0e-48	75.48	protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 isoform X3 OS=Cucumis mel...	[more]
A0A6J1CZD7	1.2e-45	72.61	protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 OS=Momordica charantia OX...	[more]

BLAST of HG10009612 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75010.1	1.4e-20	42.76	GTP binding	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR045013	ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3	PANTHER	PTHR43215:SF11	PROTEIN ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3	coord: 24..154
None	No IPR available	PANTHER	PTHR43215	FAMILY NOT NAMED	coord: 24..154
IPR036525	Tubulin/FtsZ, GTPase domain superfamily	SUPERFAMILY	52490	Tubulin nucleotide-binding domain-like	coord: 7..60

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10009612.1	HG10009612.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010020	chloroplast fission
biological_process	GO:0015074	DNA integration
cellular_component	GO:0009707	chloroplast outer membrane
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0035452	extrinsic component of plastid membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0043621	protein self-association