
HG10009605 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGTCCTTCTCCAGTGCTTCAAAAGCTCTGATTGTGGGTTTCTTTGTGATTATTCTTGTGGGTAATTGGGATGGTTTCATTGCCGGAGTTGGGGCAGCCGGAGAGTGCGGGAAGACGCCGATAGAATCGGCGGCGGCGGGGCTGATGCCGTGTCTGGGGGCAGTTAGGGACGCAAAAGCTAAGGTTACGGCGGCGTGCTGCAGCAAAGTGGGGGCGATGTTTAATAGTTCTCCGAAATGCCTTTGCGCCATTCTTCTTTCGCCTTTGGCTAAGCAGGCCGGAATAAACCCCGCCATTGCCATTACAATCCCCAAGCGCTGTAACATCAGAAACCGTCCCGTCGGCAAGAAATGTGGAAGTAAGTTCGGAAATTGCAATTTCTAA ATGGGGTCCTTCTCCAGTGCTTCAAAAGCTCTGATTGTGGGTTTCTTTGTGATTATTCTTGTGGGTAATTGGGATGGTTTCATTGCCGGAGTTGGGGCAGCCGGAGAGTGCGGGAAGACGCCGATAGAATCGGCGGCGGCGGGGCTGATGCCGTGTCTGGGGGCAGTTAGGGACGCAAAAGCTAAGGTTACGGCGGCGTGCTGCAGCAAAGTGGGGGCGATGTTTAATAGTTCTCCGAAATGCCTTTGCGCCATTCTTCTTTCGCCTTTGGCTAAGCAGGCCGGAATAAACCCCGCCATTGCCATTACAATCCCCAAGCGCTGTAACATCAGAAACCGTCCCGTCGGCAAGAAATGTGGAAGTAAGTTCGGAAATTGCAATTTCTAA ATGGGGTCCTTCTCCAGTGCTTCAAAAGCTCTGATTGTGGGTTTCTTTGTGATTATTCTTGTGGGTAATTGGGATGGTTTCATTGCCGGAGTTGGGGCAGCCGGAGAGTGCGGGAAGACGCCGATAGAATCGGCGGCGGCGGGGCTGATGCCGTGTCTGGGGGCAGTTAGGGACGCAAAAGCTAAGGTTACGGCGGCGTGCTGCAGCAAAGTGGGGGCGATGTTTAATAGTTCTCCGAAATGCCTTTGCGCCATTCTTCTTTCGCCTTTGGCTAAGCAGGCCGGAATAAACCCCGCCATTGCCATTACAATCCCCAAGCGCTGTAACATCAGAAACCGTCCCGTCGGCAAGAAATGTGGAAGTAAGTTCGGAAATTGCAATTTCTAA MGSFSSASKALIVGFFVIILVGNWDGFIAGVGAAGECGKTPIESAAAGLMPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQAGINPAIAITIPKRCNIRNRPVGKKCGSKFGNCNF Homology
BLAST of HG10009605 vs. NCBI nr
Match: XP_004151148.1 (protein YLS3 [Cucumis sativus] >KGN49748.1 hypothetical protein Csa_017829 [Cucumis sativus]) HSP 1 Score: 191.0 bits (484), Expect = 6.1e-45 Identity = 101/120 (84.17%), Postives = 104/120 (86.67%), Query Frame = 0
BLAST of HG10009605 vs. NCBI nr
Match: XP_016903714.1 (PREDICTED: protein YLS3 [Cucumis melo]) HSP 1 Score: 188.7 bits (478), Expect = 3.1e-44 Identity = 102/123 (82.93%), Postives = 106/123 (86.18%), Query Frame = 0
BLAST of HG10009605 vs. NCBI nr
Match: KAA0067590.1 (protein YLS3 [Cucumis melo var. makuwa] >TYJ97169.1 protein YLS3 [Cucumis melo var. makuwa]) HSP 1 Score: 188.7 bits (478), Expect = 3.1e-44 Identity = 102/123 (82.93%), Postives = 106/123 (86.18%), Query Frame = 0
BLAST of HG10009605 vs. NCBI nr
Match: XP_022962902.1 (non-specific lipid transfer protein GPI-anchored 2 [Cucurbita moschata] >KAG6601904.1 hypothetical protein SDJN03_07137, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032603.1 hypothetical protein SDJN02_06652 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 181.0 bits (458), Expect = 6.4e-42 Identity = 92/120 (76.67%), Postives = 102/120 (85.00%), Query Frame = 0
BLAST of HG10009605 vs. NCBI nr
Match: XP_023516114.1 (non-specific lipid transfer protein GPI-anchored 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 178.7 bits (452), Expect = 3.2e-41 Identity = 91/120 (75.83%), Postives = 101/120 (84.17%), Query Frame = 0
BLAST of HG10009605 vs. ExPASy TrEMBL
Match: A0A0A0KJJ0 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G099500 PE=4 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 3.0e-45 Identity = 101/120 (84.17%), Postives = 104/120 (86.67%), Query Frame = 0
BLAST of HG10009605 vs. ExPASy TrEMBL
Match: A0A5A7VK87 (Protein YLS3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174G00480 PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 1.5e-44 Identity = 102/123 (82.93%), Postives = 106/123 (86.18%), Query Frame = 0
BLAST of HG10009605 vs. ExPASy TrEMBL
Match: A0A1S4E669 (protein YLS3 OS=Cucumis melo OX=3656 GN=LOC103504132 PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 1.5e-44 Identity = 102/123 (82.93%), Postives = 106/123 (86.18%), Query Frame = 0
BLAST of HG10009605 vs. ExPASy TrEMBL
Match: A0A6J1HDU2 (non-specific lipid transfer protein GPI-anchored 2 OS=Cucurbita moschata OX=3662 GN=LOC111463265 PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 3.1e-42 Identity = 92/120 (76.67%), Postives = 102/120 (85.00%), Query Frame = 0
BLAST of HG10009605 vs. ExPASy TrEMBL
Match: A0A6J1JLA4 (non-specific lipid transfer protein GPI-anchored 2 OS=Cucurbita maxima OX=3661 GN=LOC111486908 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 6.4e-40 Identity = 91/121 (75.21%), Postives = 101/121 (83.47%), Query Frame = 0
BLAST of HG10009605 vs. TAIR 10
Match: AT2G37870.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 129.4 bits (324), Expect = 2.0e-30 Identity = 59/93 (63.44%), Postives = 74/93 (79.57%), Query Frame = 0
BLAST of HG10009605 vs. TAIR 10
Match: AT3G53980.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 100.5 bits (249), Expect = 1.0e-21 Identity = 53/116 (45.69%), Postives = 75/116 (64.66%), Query Frame = 0
BLAST of HG10009605 vs. TAIR 10
Match: AT3G53980.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 100.5 bits (249), Expect = 1.0e-21 Identity = 53/116 (45.69%), Postives = 75/116 (64.66%), Query Frame = 0
BLAST of HG10009605 vs. TAIR 10
Match: AT5G05960.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 99.8 bits (247), Expect = 1.7e-21 Identity = 49/91 (53.85%), Postives = 63/91 (69.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|