HG10009573 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10009573
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	B3 domain-containing protein At2g31420-like
Location	Chr06: 7585481 .. 7585882 (+)
RNA-Seq Expression	HG10009573
Synteny	HG10009573

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGGACATGAAATTAACCTGGTGATTCAAAAGCAACTTCAAGATACAGATCTAAACAAGAATCACGGGCGTTTGTCTCTTCCTGCAAAGAAATTACTGTATGATTTTGCAACAGAGGAGGAGAGGAAGCTGCTGAGCGAACAAGAAAACAAGAACAAAAAAGGGATGAATGTAGTGATAATGGATGATGTTTTAGAAGAAAGAAGAATTTGTTTGAAGAAGTGGAAGATTGGAAGTGGGGATGTGTACTGTTTGATGACACAGTGGAATACGTTTGTGGAAGAAAGGAGATTGAAAAGTGGAGACCATATTCGACTGTGGAGCTTCAGAAAAGATGATGAAATTGAGGGTTCTTCTCATCTCTGTTTTGCAATGGTGAAGCTAATTCATGGGGTGTGA

mRNA sequence

ATGGGTGGACATGAAATTAACCTGGTGATTCAAAAGCAACTTCAAGATACAGATCTAAACAAGAATCACGGGCGTTTGTCTCTTCCTGCAAAGAAATTACTGTATGATTTTGCAACAGAGGAGGAGAGGAAGCTGCTGAGCGAACAAGAAAACAAGAACAAAAAAGGGATGAATGTAGTGATAATGGATGATGTTTTAGAAGAAAGAAGAATTTGTTTGAAGAAGTGGAAGATTGGAAGTGGGGATGTGTACTGTTTGATGACACAGTGGAATACGTTTGTGGAAGAAAGGAGATTGAAAAGTGGAGACCATATTCGACTGTGGAGCTTCAGAAAAGATGATGAAATTGAGGGTTCTTCTCATCTCTGTTTTGCAATGGTGAAGCTAATTCATGGGGTGTGA

Coding sequence (CDS)

ATGGGTGGACATGAAATTAACCTGGTGATTCAAAAGCAACTTCAAGATACAGATCTAAACAAGAATCACGGGCGTTTGTCTCTTCCTGCAAAGAAATTACTGTATGATTTTGCAACAGAGGAGGAGAGGAAGCTGCTGAGCGAACAAGAAAACAAGAACAAAAAAGGGATGAATGTAGTGATAATGGATGATGTTTTAGAAGAAAGAAGAATTTGTTTGAAGAAGTGGAAGATTGGAAGTGGGGATGTGTACTGTTTGATGACACAGTGGAATACGTTTGTGGAAGAAAGGAGATTGAAAAGTGGAGACCATATTCGACTGTGGAGCTTCAGAAAAGATGATGAAATTGAGGGTTCTTCTCATCTCTGTTTTGCAATGGTGAAGCTAATTCATGGGGTGTGA

Protein sequence

MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLKSGDHIRLWSFRKDDEIEGSSHLCFAMVKLIHGV

Homology

[Close]

BLAST of HG10009573 vs. NCBI nr
Match: XP_038875653.1 (B3 domain-containing protein At1g05920-like [Benincasa hispida])

HSP 1 Score: 240.0 bits (611), Expect = 1.2e-59
Identity = 115/132 (87.12%), Postives = 122/132 (92.42%), Query Frame = 0


Query: 1   MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVV 60
           MGG+EINLVIQKQLQDTDLNKN GRLSLP KKLL+DFATEEER+LLS+QENKNKKG+NVV
Sbjct: 115 MGGYEINLVIQKQLQDTDLNKNLGRLSLPQKKLLFDFATEEERRLLSQQENKNKKGLNVV 174

Query: 61  IMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLKSGDHIRLWSFRKDDEIEGSS 120
           IMD VLEER ICLKKWKIGSGDVYCLMTQWN FV+ER LKSGDHI+LWSFRKDDE EG  
Sbjct: 175 IMDHVLEERNICLKKWKIGSGDVYCLMTQWNAFVKERGLKSGDHIQLWSFRKDDENEGGF 234

Query: 121 HLCFAMVKLIHG 133
            LCFAMVKLIHG
Sbjct: 235 RLCFAMVKLIHG 246

[Close]

BLAST of HG10009573 vs. NCBI nr
Match: XP_038876237.1 (putative B3 domain-containing protein At3g24850 [Benincasa hispida])

HSP 1 Score: 216.5 bits (550), Expect = 1.4e-52
Identity = 104/129 (80.62%), Postives = 117/129 (90.70%), Query Frame = 0


Query: 1   MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVV 60
           MGG+ INLVIQKQLQDTDLNKN GRLSLPA+KLL+DF TE+E+ LLS++ENK KKGMNV+
Sbjct: 119 MGGYGINLVIQKQLQDTDLNKNQGRLSLPAEKLLFDFTTEDEKILLSQRENKKKKGMNVL 178

Query: 61  IMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLKSGDHIRLWSFRKDDEIEGSS 120
           IMDDVLEERRICLK WKIGSGDVYCLMTQWN+FVEE  LKSG+HI++W FRKDDE E +S
Sbjct: 179 IMDDVLEERRICLKMWKIGSGDVYCLMTQWNSFVEETGLKSGEHIQIWCFRKDDEFE-AS 238

Query: 121 HLCFAMVKL 130
            LCFAMVKL
Sbjct: 239 RLCFAMVKL 246

[Close]

BLAST of HG10009573 vs. NCBI nr
Match: XP_038874962.1 (putative B3 domain-containing protein At5g35780 [Benincasa hispida])

HSP 1 Score: 216.1 bits (549), Expect = 1.9e-52
Identity = 103/129 (79.84%), Postives = 115/129 (89.15%), Query Frame = 0


Query: 1   MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVV 60
           MGG+EINLVIQKQLQDTDLNKN GRLSLP +KLL+DFATEEE+KLLS++ENK KKGMNV+
Sbjct: 119 MGGYEINLVIQKQLQDTDLNKNQGRLSLPTEKLLFDFATEEEKKLLSQRENKKKKGMNVL 178

Query: 61  IMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLKSGDHIRLWSFRKDDEIEGSS 120
           IMD+V EERRICLKKWKIGSGDVYCLMTQWN F EE  LKSG HI++W FR+DDE E +S
Sbjct: 179 IMDNVSEERRICLKKWKIGSGDVYCLMTQWNAFAEETGLKSGQHIQIWCFRRDDEFE-AS 238

Query: 121 HLCFAMVKL 130
            LCF MVKL
Sbjct: 239 RLCFGMVKL 246

[Close]

BLAST of HG10009573 vs. NCBI nr
Match: XP_038874960.1 (B3 domain-containing protein At2g31420-like [Benincasa hispida])

HSP 1 Score: 213.8 bits (543), Expect = 9.2e-52
Identity = 102/129 (79.07%), Postives = 115/129 (89.15%), Query Frame = 0


Query: 1   MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVV 60
           MGG+ INLVIQKQLQDTDLNKN GRLSLPA+KLL+DFATEEE+KLLS++ENK KKGMNV+
Sbjct: 110 MGGYGINLVIQKQLQDTDLNKNQGRLSLPAEKLLFDFATEEEKKLLSQRENKKKKGMNVL 169

Query: 61  IMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLKSGDHIRLWSFRKDDEIEGSS 120
           IMD+V EER ICLKKWKIGSGDVYCLMTQWN F EE+ LKSG HI++W FR+DDE E +S
Sbjct: 170 IMDNVSEERSICLKKWKIGSGDVYCLMTQWNAFAEEKGLKSGQHIQIWCFRRDDEFE-AS 229

Query: 121 HLCFAMVKL 130
            LCF MVKL
Sbjct: 230 RLCFVMVKL 237

[Close]

BLAST of HG10009573 vs. NCBI nr
Match: XP_038907053.1 (B3 domain-containing protein At2g31420-like [Benincasa hispida])

HSP 1 Score: 204.9 bits (520), Expect = 4.3e-49
Identity = 100/129 (77.52%), Postives = 113/129 (87.60%), Query Frame = 0


Query: 1   MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVV 60
           MGG+EI LVIQKQL+DTDL+KNHGRLS+P KKLL+DF TEEERKLLSE EN+NKKG+N V
Sbjct: 117 MGGYEIRLVIQKQLEDTDLSKNHGRLSMPIKKLLFDFTTEEERKLLSEVENQNKKGINTV 176

Query: 61  IMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLKSGDHIRLWSFRKDDEIEGSS 120
           I+DDV EER ICLKKWKIGSGDVYCL TQWN+ VEE  LK G HI++WSFRKDDE E + 
Sbjct: 177 IIDDV-EERMICLKKWKIGSGDVYCLTTQWNSLVEETGLKVGQHIQIWSFRKDDENE-AY 236

Query: 121 HLCFAMVKL 130
           H+CFAMVKL
Sbjct: 237 HVCFAMVKL 243

[Close]

BLAST of HG10009573 vs. ExPASy Swiss-Prot
Match: Q5RM09 (B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana OX=3702 GN=At1g05920 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.2e-11
Identity = 45/134 (33.58%), Postives = 68/134 (50.75%), Query Frame = 0


Query: 2   GGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLY-DFATEEERKLLSEQE--NKNKKGMN 61
           G  +  L+I+K L   D++    RLS+P   ++  DF T +E +L+ E E  N+   G+ 
Sbjct: 176 GAGDPKLIIEKNLDSNDVDPRQNRLSIPINTVIQNDFLTLDESRLIDEDEITNEGNMGVA 235

Query: 62  VVIMDDVLEERRICLKKW--KIGSGDVY---CLMTQWNTFVEERRLKSGDHIRLWSFRKD 121
             ++D   ++  +  K+W     SG  Y    L  +W+  VE   LK GD I LWSFR +
Sbjct: 236 AFLVDQRTKKWNMGFKQWFMTTDSGSSYWSFVLRGEWSNVVETNGLKEGDKISLWSFRSN 295

Query: 122 DEIEGSSHLCFAMV 128
           D       LCFA+V
Sbjct: 296 D------ILCFALV 303

[Close]

BLAST of HG10009573 vs. ExPASy Swiss-Prot
Match: Q8RV83 (B3 domain-containing protein At2g31720 OS=Arabidopsis thaliana OX=3702 GN=ARF70 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.1e-10
Identity = 36/118 (30.51%), Postives = 64/118 (54.24%), Query Frame = 0


Query: 1   MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLL-YDFATEEERKLLSEQENK---NKKG 60
           + G +  L+  K L ++D+++   RL +P K++L  DF  EEE + +     K   + KG
Sbjct: 140 VNGMDAKLIFVKVLPNSDVDELQTRLMMPWKQILDMDFLNEEELEKIDRHHKKISASDKG 199

Query: 61  MNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLKSGDHIRLWSFRKDD 115
            +V++++    +R++ LK+W + S   Y L   WN  V +  L+ G  +R+WSF   D
Sbjct: 200 ADVIVVNSKGLQRKLKLKRWDMTSTSNYVLGLGWNKVVTDNILQRGTRLRIWSFHSPD 257

[Close]

BLAST of HG10009573 vs. ExPASy Swiss-Prot
Match: F4I8U3 (Putative B3 domain-containing protein At1g05615 OS=Arabidopsis thaliana OX=3702 GN=At1g05615 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.0e-08
Identity = 25/83 (30.12%), Postives = 53/83 (63.86%), Query Frame = 0


Query: 35  YDFATEEERKLLSEQENKNK-KGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTF 94
           ++F   +E++++ E  NK + +G++V++++    E  + L++W +G+  +Y L++     
Sbjct: 77  FEFLNPDEKRIIEEHANKEREEGVDVILVNFDRREYMLNLRRWNMGTSPLYILVSGRYNV 136

Query: 95  VEERRLKSGDHIRLWSFRKDDEI 117
           V+  RLK G+ IR+WSF  DD++
Sbjct: 137 VKGCRLKEGNEIRIWSFHFDDQL 159

[Close]

BLAST of HG10009573 vs. ExPASy Swiss-Prot
Match: Q9ZV39 (Putative B3 domain-containing protein At2g18810 OS=Arabidopsis thaliana OX=3702 GN=At2g18810 PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-06
Identity = 28/82 (34.15%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 36  DFATEEERKLLSEQENK---NKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNT 95
           DF  EEE + +     K   + KG +V++++    +R++ LK+W + S   Y L + WN 
Sbjct: 94  DFLNEEELEKIDRHYKKISDSDKGADVILVNSEGLQRKLKLKRWDMTSTSNYVLGSGWNK 153

Query: 96  FVEERRLKSGDHIRLWSFRKDD 115
            V E  L++G  +RLWSF   D
Sbjct: 154 VVTENILETGTRLRLWSFHSPD 175

[Close]

BLAST of HG10009573 vs. ExPASy Swiss-Prot
Match: Q9FFX1 (B3 domain-containing protein At5g38500 OS=Arabidopsis thaliana OX=3702 GN=At5g38500 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.3e-05
Identity = 40/149 (26.85%), Postives = 67/149 (44.97%), Query Frame = 0


Query: 8   LVIQKQLQDTDLNKNHGRLSLPAKKLL-YDFATEEERKLLSEQENKNKK----------- 67
           L+ ++ L  +D+N N  RL +P +KL+  DF T EE + + E ++K+ +           
Sbjct: 266 LIFERTLFKSDVNSNLSRLLIPFQKLIRNDFLTPEECRAMQEDKDKDDEDISVGTILVCQ 325

Query: 68  -------------GMNVVIMDDVLEERRICLKKWKI----GSGDV-YCLMTQWNTFVEER 127
                        G   ++++   +   +  K W +    G G + Y L   WN  V+  
Sbjct: 326 AKQEDEDKDDEDIGAGTILVNQRFKMWGLRFKIWGMEKDSGHGTLNYILNWDWNDVVKGN 385

[Close]

BLAST of HG10009573 vs. ExPASy TrEMBL
Match: A0A0A0KP87 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G544060 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.8e-48
Identity = 98/129 (75.97%), Postives = 112/129 (86.82%), Query Frame = 0


Query: 1   MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVV 60
           MGG+EINLVIQKQL DTDLNKNHGRLS+  K+L +DFATEEE KLLSEQENKNK G+NV+
Sbjct: 135 MGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLLSEQENKNKMGINVM 194

Query: 61  IMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLKSGDHIRLWSFRKDDEIEGSS 120
           I+DDVLEER +CLKKWKIGSG VYCLMT+WN  VEER LKSG+ I++WSFRKDDE E + 
Sbjct: 195 ILDDVLEERMLCLKKWKIGSGYVYCLMTKWNLMVEERGLKSGEEIQVWSFRKDDEDE-AH 254

Query: 121 HLCFAMVKL 130
            LC A+VKL
Sbjct: 255 RLCLALVKL 262

[Close]

BLAST of HG10009573 vs. ExPASy TrEMBL
Match: A0A5A7TY94 (Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00280 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.3e-48
Identity = 95/129 (73.64%), Postives = 112/129 (86.82%), Query Frame = 0


Query: 1   MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVV 60
           MGG+EI LVIQKQL DTDLNKNHGRLS+  K+L +DFATEEE KLLSEQENKNK+G+NV+
Sbjct: 138 MGGYEIRLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEETKLLSEQENKNKRGINVM 197

Query: 61  IMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLKSGDHIRLWSFRKDDEIEGSS 120
           ++DDVLEER +CLKKWKIGSG+VYCLMT+WN  VEER  K G+ I++WSFRKDDE E + 
Sbjct: 198 MLDDVLEERMLCLKKWKIGSGEVYCLMTRWNLMVEERGFKGGEEIQVWSFRKDDEYE-AH 257

Query: 121 HLCFAMVKL 130
            LCFA+VKL
Sbjct: 258 RLCFALVKL 265

[Close]

BLAST of HG10009573 vs. ExPASy TrEMBL
Match: A0A1S4E600 (putative B3 domain-containing protein At3g24850 OS=Cucumis melo OX=3656 GN=LOC103504562 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.3e-48
Identity = 95/129 (73.64%), Postives = 112/129 (86.82%), Query Frame = 0


Query: 1   MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVV 60
           MGG+EI LVIQKQL DTDLNKNHGRLS+  K+L +DFATEEE KLLSEQENKNK+G+NV+
Sbjct: 138 MGGYEIRLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEETKLLSEQENKNKRGINVM 197

Query: 61  IMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLKSGDHIRLWSFRKDDEIEGSS 120
           ++DDVLEER +CLKKWKIGSG+VYCLMT+WN  VEER  K G+ I++WSFRKDDE E + 
Sbjct: 198 MLDDVLEERMLCLKKWKIGSGEVYCLMTRWNLMVEERGFKGGEEIQVWSFRKDDEYE-AH 257

Query: 121 HLCFAMVKL 130
            LCFA+VKL
Sbjct: 258 RLCFALVKL 265

[Close]

BLAST of HG10009573 vs. ExPASy TrEMBL
Match: A0A5A7TY85 (Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G00670 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.9e-48
Identity = 97/129 (75.19%), Postives = 112/129 (86.82%), Query Frame = 0


Query: 1   MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVV 60
           MGG+EI LVIQKQL DTDLNK HGRLS+  K+L +DFATEEE KLLSEQENKNKKG+NV+
Sbjct: 121 MGGYEIRLVIQKQLTDTDLNKIHGRLSMNKKQLSFDFATEEEGKLLSEQENKNKKGINVM 180

Query: 61  IMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLKSGDHIRLWSFRKDDEIEGSS 120
           I+DDVLEER +CLKKWKIGSG+VYCLMT+WN  VE+R  KSG+ I+LWSFRKDDE E + 
Sbjct: 181 ILDDVLEERMLCLKKWKIGSGEVYCLMTKWNLMVEKRGFKSGEEIQLWSFRKDDEYE-AH 240

Query: 121 HLCFAMVKL 130
            LCFA+VKL
Sbjct: 241 RLCFALVKL 248

[Close]

BLAST of HG10009573 vs. ExPASy TrEMBL
Match: A0A5A7TWX2 (Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold663G00300 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 5.1e-48
Identity = 95/129 (73.64%), Postives = 113/129 (87.60%), Query Frame = 0


Query: 1   MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVV 60
           MGG+EI LVIQKQL DTDLNKNHGRLS+  K+L +DFATEEE +LLSEQENKNKKG+NV+
Sbjct: 121 MGGYEIRLVIQKQLTDTDLNKNHGRLSMNKKQLSFDFATEEESELLSEQENKNKKGINVM 180

Query: 61  IMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLKSGDHIRLWSFRKDDEIEGSS 120
           I+DDVLEER +CLKKWKIGSG+VYCLMT+WN  VE+R  +SG+ I++WSFRKDDE E + 
Sbjct: 181 ILDDVLEERMLCLKKWKIGSGEVYCLMTKWNLMVEKRGFESGEEIQVWSFRKDDEYE-AH 240

Query: 121 HLCFAMVKL 130
            LCFA+VKL
Sbjct: 241 RLCFALVKL 248

[Close]

BLAST of HG10009573 vs. TAIR 10
Match: AT1G05920.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 70.1 bits (170), Expect = 1.5e-12
Identity = 45/134 (33.58%), Postives = 68/134 (50.75%), Query Frame = 0


Query: 2   GGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLY-DFATEEERKLLSEQE--NKNKKGMN 61
           G  +  L+I+K L   D++    RLS+P   ++  DF T +E +L+ E E  N+   G+ 
Sbjct: 176 GAGDPKLIIEKNLDSNDVDPRQNRLSIPINTVIQNDFLTLDESRLIDEDEITNEGNMGVA 235

Query: 62  VVIMDDVLEERRICLKKW--KIGSGDVY---CLMTQWNTFVEERRLKSGDHIRLWSFRKD 121
             ++D   ++  +  K+W     SG  Y    L  +W+  VE   LK GD I LWSFR +
Sbjct: 236 AFLVDQRTKKWNMGFKQWFMTTDSGSSYWSFVLRGEWSNVVETNGLKEGDKISLWSFRSN 295

Query: 122 DEIEGSSHLCFAMV 128
           D       LCFA+V
Sbjct: 296 D------ILCFALV 303

[Close]

BLAST of HG10009573 vs. TAIR 10
Match: AT2G31720.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 65.9 bits (159), Expect = 2.9e-11
Identity = 36/118 (30.51%), Postives = 64/118 (54.24%), Query Frame = 0


Query: 1   MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLL-YDFATEEERKLLSEQENK---NKKG 60
           + G +  L+  K L ++D+++   RL +P K++L  DF  EEE + +     K   + KG
Sbjct: 140 VNGMDAKLIFVKVLPNSDVDELQTRLMMPWKQILDMDFLNEEELEKIDRHHKKISASDKG 199

Query: 61  MNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLKSGDHIRLWSFRKDD 115
            +V++++    +R++ LK+W + S   Y L   WN  V +  L+ G  +R+WSF   D
Sbjct: 200 ADVIVVNSKGLQRKLKLKRWDMTSTSNYVLGLGWNKVVTDNILQRGTRLRIWSFHSPD 257

[Close]

BLAST of HG10009573 vs. TAIR 10
Match: AT1G05615.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 58.9 bits (141), Expect = 3.5e-09
Identity = 25/83 (30.12%), Postives = 53/83 (63.86%), Query Frame = 0


Query: 35  YDFATEEERKLLSEQENKNK-KGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTF 94
           ++F   +E++++ E  NK + +G++V++++    E  + L++W +G+  +Y L++     
Sbjct: 77  FEFLNPDEKRIIEEHANKEREEGVDVILVNFDRREYMLNLRRWNMGTSPLYILVSGRYNV 136

Query: 95  VEERRLKSGDHIRLWSFRKDDEI 117
           V+  RLK G+ IR+WSF  DD++
Sbjct: 137 VKGCRLKEGNEIRIWSFHFDDQL 159

[Close]

BLAST of HG10009573 vs. TAIR 10
Match: AT2G18810.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 54.3 bits (129), Expect = 8.7e-08
Identity = 28/82 (34.15%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 36  DFATEEERKLLSEQENK---NKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNT 95
           DF  EEE + +     K   + KG +V++++    +R++ LK+W + S   Y L + WN 
Sbjct: 94  DFLNEEELEKIDRHYKKISDSDKGADVILVNSEGLQRKLKLKRWDMTSTSNYVLGSGWNK 153

Query: 96  FVEERRLKSGDHIRLWSFRKDD 115
            V E  L++G  +RLWSF   D
Sbjct: 154 VVTENILETGTRLRLWSFHSPD 175

[Close]

BLAST of HG10009573 vs. TAIR 10
Match: AT5G38500.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 50.1 bits (118), Expect = 1.6e-06
Identity = 40/149 (26.85%), Postives = 67/149 (44.97%), Query Frame = 0


Query: 8   LVIQKQLQDTDLNKNHGRLSLPAKKLL-YDFATEEERKLLSEQENKNKK----------- 67
           L+ ++ L  +D+N N  RL +P +KL+  DF T EE + + E ++K+ +           
Sbjct: 266 LIFERTLFKSDVNSNLSRLLIPFQKLIRNDFLTPEECRAMQEDKDKDDEDISVGTILVCQ 325

Query: 68  -------------GMNVVIMDDVLEERRICLKKWKI----GSGDV-YCLMTQWNTFVEER 127
                        G   ++++   +   +  K W +    G G + Y L   WN  V+  
Sbjct: 326 AKQEDEDKDDEDIGAGTILVNQRFKMWGLRFKIWGMEKDSGHGTLNYILNWDWNDVVKGN 385

The following BLAST results are available for this feature:

BLAST of HG10009573 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875653.1	1.2e-59	87.12	B3 domain-containing protein At1g05920-like [Benincasa hispida]	[more]
XP_038876237.1	1.4e-52	80.62	putative B3 domain-containing protein At3g24850 [Benincasa hispida]	[more]
XP_038874962.1	1.9e-52	79.84	putative B3 domain-containing protein At5g35780 [Benincasa hispida]	[more]
XP_038874960.1	9.2e-52	79.07	B3 domain-containing protein At2g31420-like [Benincasa hispida]	[more]
XP_038907053.1	4.3e-49	77.52	B3 domain-containing protein At2g31420-like [Benincasa hispida]	[more]

BLAST of HG10009573 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5RM09	2.2e-11	33.58	B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana OX=3702 GN=At1g05...	[more]
Q8RV83	4.1e-10	30.51	B3 domain-containing protein At2g31720 OS=Arabidopsis thaliana OX=3702 GN=ARF70 ...	[more]
F4I8U3	5.0e-08	30.12	Putative B3 domain-containing protein At1g05615 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9ZV39	1.2e-06	34.15	Putative B3 domain-containing protein At2g18810 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FFX1	2.3e-05	26.85	B3 domain-containing protein At5g38500 OS=Arabidopsis thaliana OX=3702 GN=At5g38...	[more]

BLAST of HG10009573 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KP87	1.8e-48	75.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G544060 PE=4 SV=1	[more]
A0A5A7TY94	2.3e-48	73.64	Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S4E600	2.3e-48	73.64	putative B3 domain-containing protein At3g24850 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7TY85	3.9e-48	75.19	Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5A7TWX2	5.1e-48	73.64	Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of HG10009573 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05920.1	1.5e-12	33.58	Domain of unknown function (DUF313)	[more]
AT2G31720.1	2.9e-11	30.51	Domain of unknown function (DUF313)	[more]
AT1G05615.1	3.5e-09	30.12	Domain of unknown function (DUF313)	[more]
AT2G18810.1	8.7e-08	34.15	Domain of unknown function (DUF313)	[more]
AT5G38500.1	1.6e-06	26.85	Domain of unknown function (DUF313)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005508	B3 domain-containing protein At2g31720-like	PFAM	PF03754	DUF313	coord: 5..95 e-value: 1.5E-18 score: 67.0
IPR005508	B3 domain-containing protein At2g31720-like	PANTHER	PTHR31541	B3 DOMAIN PLANT PROTEIN-RELATED	coord: 1..129
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 2..122 e-value: 2.3E-18 score: 68.0
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 7..113
None	No IPR available	PANTHER	PTHR31541:SF25	DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED	coord: 1..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10009573.1	HG10009573.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding