HG10009556 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10009556
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	mediator of RNA polymerase II transcription subunit 23
Location	Chr06: 7433693 .. 7443751 (+)
RNA-Seq Expression	HG10009556
Synteny	HG10009556

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTTCAGATCTTATTCTCCTTTACTGCAGCATTTAGCACAAAGAAACCCATCCCTATTGAGCAAACCAGGGGTTACACTTCTAGTGCTTGAAATTCTGAACTATCGGCTGCTTCCTCTTTACAGGTATAATCCCCCCCACCCCCCACCCCCAACCGCACCCACCAAAAAAATAAAATAAACAATCACAGACAGAATTCCGTTGAAACAGCTCTTAACGAATCCCTTTGAAATGAATAAAACTAAGAGAATGGGTGATATGCCTACATCACAATTTACACTGAATTACGTTGGTAAATATTATGATATATACAAGATATTTGATATCTTATATGCAACATGATAATGATGTTAAATATTTTTTACTTATGTTTCTCATCTCTTCTAGGTACCAAGGCAAGAGTAAGGCTTTGATGTATGATGTGACAAAAATAATTTCTGCACTTAAAGGAAAGCGTGGAGACCATCGAGTATTTAGATTGGCTGAAAACTTGTGCATGAATCTTATTTTTTCATTAAGAGATTTTTTCTTTGTGAAAAGGGAAGGGAAGGTGGGTGAGCAAAATGTTCTCAAAGCTGAATTATAAGTTATAATATGTGTTTCATTTGCATTGTTTCACTGAAACTGTACTTTCTCTTATTCAAAAGGGGCCAACTGAATTTACAGAGACACTAAATCGATTAGCTGTGGTCACTCTTGCTATCCTCATTAAAACACGGGGAATAGCTGATGCTGATCACTTGCTTTATCTTCAAACAATGCTAGAGCAGACAATGGCCACCAGCCAACATACTTGGTCAGAAAAAACTCTCCGATACTTCCCGCCTGTTCTTCGTGAAGTGTTGATTGGAAGAATAGATAAAAGAGGTGTAGCTATTCAAGCATGGCAGCAGGTTTGCTATCTCAACATATGTTTACCCTAATTAAGTCTTCCCCCCACCCCAAATTGGCTTAAAAAACCCAGGTACATGTGGTACTTGTGAAGACATGACAAGTCTTTTGAAGCTCTTAAAATTACCTGTACCGTAGTTGATACTTAATAGGTCAATCCTTTAAATGTCTTGTACAATAGGATATAGATGTAGCAAAAATTGACAGGTGACAGGTCCAGAGTGTTTCAAAGGTTTATTAAGGGAGTGTTTGAGGTACCAAGTTGAGTTATTAATTCTAGAGTTGTTTAGTCTAAAGAGTTAATTAGTTTGTGGAATTAAATAATTTGTGTTCGGAATATAGAGTTGTTTAATCTGTGTTGAGACAACCTGTATTTGGGGTGGAAAGGTTTAACCTCGAGTTATAAAGTCTATATACTAACTGAGCTATATTTCAATCAAATTTTTCAATAATAACAAATTTAATTTCAAATTTTCCTACATTATTTGTTGTACCTTTTAATTTTATTTTCACTCAAATTTGATACGGGATTGAATGAATGTAACAAATCGTCTTAATTTGAGATTAACTCTCTAGATGATCTAGGATTTGGATTTTAAATTTTTAAAACAATATATGAGATAGAATTTGGAATATGTCCAAATTTAATACAAGATTAATATTAGGGTCTATCCAAAATCTGGTTTAGATTTAAAATGGAATTCTGAGATAGTCTTTGTAGAATTTGATTCGGGATGAAAATTTGATTATATGCCCAAATTCAAATCAAATTTGAAATTTATCTATCTTTTGATTTAAATTCTACTAATTTGTTGAGTATGATTTGAATCAAAATTCCTAATTGATAAGGATTTCAAATTGGTAATTTTGTTTAGATTAATTCTTGTTATTTGATATATGTACAATTCAATAGTAAACACTAGTGAAGTTGGTGAAGTGGAGTTATTTAACATTGTATTGTGAAGTATGTGGGGCAAACAAGGAACTAACTCTACCCAACTCAAGTTTTTGGCCAAACACCCCCTAAATGTTTGTGTCATGTTACTACTACTATGCTGGGACTTTATGTAACCCTCGCCTAAGAGAAAAAAATGAAAAATAGTGAGTTGATATTTTTAACCATCATTTGCAGGCAGAAACCACTGTGATCAACCAATGCAACCAACTTCTTGCCCCATCAGCTGATCCGGCATATGTGATGACCTACATCAGTCATAGTTTTCCGCAGCATAAACAATATCTATGTGCTGGTGCATGGATAATTATGCAAGGGCATCCTGAAAATATTAACTGCACCACCTTGGTATGAATTCCCTTCTCATTCTTTAGATACATCAATTTCTTTGTCTATTTTTTTTTACAATGCATCCATGTTATGTTTTTTTTTTATCTTTCAATTTAGGCACGGGTATTGAGAGAATTTTCACCAGAAGAAGTTACAGCTAATATTTACACAATGGTAGATGTGCTGCTTCATCACATTCAGATTGAACCTCAGCATGGACATTCCACACAGGTTTATACATACTAGCCTAGCTTATATGCACTTTCTACAAATTGGATGGAGGACTACCTCCTAACTCTTCAATAAATATGGTTAGGAACTTCTGAGACCCTAATCTCATTAAAAGATAGTCACTGGACATACACCAATGACCTTAAAAGCATATTCAGTTCTATTTAATAGATGATGGAATCTGGGAGGAAGTGGTGTTCTACGTTATTCTGCCAAAAAATGTAAAAAAAGAAAGAAAAAAGAAGAAGAATGTAATAAGTAAATAAAAAGGAAAAAGAATGAAAAGAAGTTATTCATGTCTTACAAAGGCTTTCTCATTTTGTTTTCAGGATATTTTGCTTAAAGTTTGTGCCAATCTTTCATTTTTTGTATGGACTCAAGAATTACTTCCTCTTGATATTCTGCTCCTAGCTTTCATTGACCGTGATGATGATCCCAATGCTCTACGCATAGTGGTATGCCCTTCAAACTCCTTTTTTCCCCCTTTTTCCTTCTACTTTTTGACCCTAGAGAATGATGTGCTACTATATTTGGGAAATATCGTTTTGTATGGTATATCACTGATGTTGAGCCGGTTCAGGTTGTATCCTGATTTGGAGACTGGTTTTGAATATTTATGTTTCTTTTCCTGCATAAACTCTAATAAATTTTATTCCCATTAACGATTTTAGGCCTAATGGACATGCACATGACGTCATTTTATAGAAGCAATGGAAACACATCAAAGCACATTTATTAAGTACATATTTAATTGAATACTTTTCATATTAGAATATCTCTTACGTTAAAGTTTTTTATTTTTGATATTTAGCTCTGAAAGACAATAGAATTGTTTTCCCATCTCTTTTGGAGGCATGGAAGGCCCAATAAGAAGTTGAAGCCTTCTCATTCACCGAGGTGATGCAATTCTTTTCGGCAGGAGGCTCATTAATGCTCGTCATGGATGGGCAATTCATTACAGAAAATATTCATTGCTTCACATTTAACTTTCCAGCCACAGAGAGTCATTAGTATTCCTTTCTTCATCCACAATGAACTCCAAACCACTTCTCATTTCTTCATTAATGCTATCAGCATTTAATTCATCTTCTATATCTAAGGAAACTTCATAAAAATAGAGGAGTCTTTTTGTCTTCCAATATTTTAAGATCCCTTCAATGCACCATGGACCTTATATAGAATTTTAGACAAACCCTTCTTTTGATAATGGTAAGATTTCTTGAACCTCGAGACCACAAACATTAAGAAGAAACATAATTTCCTTTTACCCGGGGAGGGAGAAGGAGATTACTTCCTTAAATGTTGAATGAAGGGGATGGAAATACTTCCTTCTTCCACAGATGGACAACAATGACCAGAAGATGCTAGAATACACAATGTGTTCCATGTATCGCAGCTCAAGAAGTTTGTAGGAGCGTTCACACGAGTTCAAACGACTCTGCTCGATTTATCAGATGAGTTTGAGTTGCAGATGATACCAGAAACGGTGTTGGGAGTACGCTGGAATAATGAAATGGTGAAGGAAGAATGGTTAGTCAAGTGGCAGAGGCAACCGGAGAGCGAAGCGACATGGGAAATTGCTGATTGGTTGAAACTACAGTTTCCCACGTTTCACCTTGAGGACAAGGTGAATGACAACCCTGGGGTATTGTAAGGCCCCCAATTCTACACACATACAAACGAAGGGGTAAAAGAGGAAACAAAGGGAAAAATAGGCTGGATGAGGAAGAGAGTTAGTTAGGCTGGAAAAAGGGGGACCAACAATGAGTAGGATGAGAGTGGGGTCCACAGTGAAGGTGGGAGGTTTAAGAGAGTGAAGGTGGGAGGTTTAAGAGAGGTTTTGTCGAGAAGAGAGGTAGGCAATTTTGTGAACAAGCTTGGCTTGGTGGAGAGGATTTCCAGCTCTCTTTAAAGTGCTGGTAGCTAGGGTTTATAGTAGCATATTTTCCTTTCTTTATGCAGTTGTGTAATTTCTGAGAATTCATAAATAAAATTATCCAGAGCAATGCTCTGTTCTTGAGACTTGTTGGGATTTTTCTGTTTGCAGGTGGAAGATTCCTAACACAAAACTAAAATAAAAACATAAAACATTATAAAGGAAATATAAAGGCATTCTAGTCAAGACAAATATAAAGGCATTCTAGTCGTTTTGTTTATTGTTTGGATATGATGAGAGTGCTAAGGGGGTGTCAACTTAGTTGAGATGTCTAGGTGCACTCACTGATCCTTTGGTTTTATGTTCCTGTATCTCTTTTTGTAACTTGAGCGTTAGTCTCATTTCATTAATTCAATGAAGAGACTCGTTTCTTTTTAAAAAAAAGTCAAAGACAAATATCGTGGAGTGAAAACCTTACAAACGACTTTGATAAGGAACACCAAGATGGAGCTGTTGATCCAAGGAAGTTGCTTGTCTTGAAAATTCTTTAATTTCTTGCCAGCTACAACTGAAATAATATAGCTTTCACTGCATAATCTAAAGCAACTTTGCCTTTGAGACTCAGAAGAGGACCAATGAGTAACTGAGATATATTGTTGATGTTGGAAATGTCCCAATGAAGGTTGAAAACCTCAAAACAATTTTGACTAAAACGGACTGGTTGAGAGCATTAAAAAAAGACATGATTGAGAGAATATTCAGCTGATAGACATATGTAACAAACTTATGGCATGGTGTACATGCACTTATAAGGAACTTTCTTTTGCAAAACTTCTCATGCCATTGATGATCTACAAAAGAATATATATTCTCTTGGGACTTATAGACTTCCATATTGCTGAAAAAACCTTTTTCTCCAAAGGCTATGAAAGCACCAAATACCTTTTTTGTGGGATTGAACACCAAATATTGAGTTAATGATTATACGCAAAAATACCTGCATTTGTTAAGGTTAATTTTAACCAGTCTATTCTTTTGAAAAAAAATCTAGAATTTTGATTGTGTCAGACAATTTTATTCCCATTTGAACAGGGAGGAAAAGAAAAAAAGTTGTATCTACAAACTACAGATGTGCTATATATGGATATGGCTTCTCCCTAAAATTAACCTGCAATGATAGTTAGCATTCATTGCCCAAGTAGGGAATGGAACCAAATTGACGACTTCATTGTATATTGTTTTGTGTATATTTGTTGTAAATTGACGACTTCACTGTAGAGCTCAAATTTTCTGATTGCTTGTCTTTCCATGTACATTTTGTTCAAAATGACTCATTCACAAAATTGATCATTGTATATCACTATTTGAAGAAGCAAATTCTTCGAAGTTTTATCATTAGATATCAGATACCTTCATGCATGGCCAACATAACTGCAATTTGATTAGCTAATAGTCTTCGTACATGTTATGCACTGCAGACTAATCTACTTGATAGGCAAGAGCTTCACCAACGAGTCAAACTATATTGTATCAGCCGGGGTTCACCTGAGCACTGGCTTCACTCTGTAGTGTTCAAAAGAAATGATTTACAAAAGGCTCTTGGGAATCATCTTTCTTGGAAGGACAGGTGACTAAGTTTGCTGGGACTTTCATAGTTGACCTTTTTTTAATTTTTTTTTTATAGAAATCTTAATGAAGAAAAATATGTATCTATAGAGATCCTAATCAAGATCTGATACATAACATCCAGTGTAATAACATCATAATTAAATGAGTAAGATGGTAATCATTTTGCACTAAGATGGTGTCTACTCTTCTTTGTATCTCAATAGTATTGTCTTCTTTTGTTTTTCTCAGTGTCTCTCTTCTCTTGAAGATTAATGTATTCGTTTCATTTCTTCAATGAAAAGTTATGTTTCCTTTAAAATAAAAAAATAAAAAATCATTTGGTCAAGTTGGGTTGATGAGTCTATCTAATTTCATTGTTTGAGTTGCTTTATTAGTTGGTTTTGTTATCGTCAGAGGAGGTTGCTTACGAGAAATTTGACAATCTGATTTTGCGTACATTGTTTTATATCTATCAGAAAATTCTCCACGTATTCTTCTGTGGGCACTATCAGGATTTTAATCAGAAAAGTTATCTTGATGTCACAGGTATCCTGTATTTTTTGACGACATTGCAGCTCGATTACTTCCAGTCATTCCATTGATAGTTTATAGGCTCATTGAAAATGATGCTGTAGATCAAGCTGATAGAGTGCTGGCCTTGTATTCTCCATTTTTGGCCTACCACCCTCTTAGATTTACATTTGTTCGTGATATACTCGCATACTTCTATAGTCATCTATCCAACAAGCTCATTGTTCGAATTTTGTATGTACTTGATATCAGCAAGGTAACTTTTTATGAATTTCTATTTCACTTACGATGTGTGTGTGTGTGTCTATGAAGCACGGATATTTCATGTGAGGCAAAGAATCCATATCAAATACGTATCAGATGCCAATACTCCCAGATACGTATCTGACACGTGATTTGGCTTTTTTTTTCGAAAGGTCGGATATGTGTGTACGTTAGGTCTTTTATTAAAGAAAAGATTAGCAGCTCATCTAATCTTTCCTAACCCAAAACTAAGCAACCTATTTAAAGAGCTCACTGCCCTAGTCCAAATCTAAAAGAAAAAATAATAATAATAAAAGACCATAGAATCATCTGATCTTCATCTTCATGTTTGAATCCCTACAAAGTCCTGCAAAATATAATCCACTTGAATATCTTCAACAAGTCAACGAAGAAGTTCTTCGTTTATTTTCATCTCTCTCTAATCTTCTTCTTCTTCTTCTCTGATCAACCTGAGTCCAGTGCACCACCAACATTTTTTATTGCATTCTATTGACTATTGTACTTCAATATCTCTGATGTTGCTTTTTGTATTGTATTTCAGTATTTGAACTTAACTTGAGATTTTATGTTTTTTTTTTTTTTTTTTGGATTTGTTGTATTATATTTAGTATCTTTATGTTAAATTTACCTATATCCTCGATTTGTTTTTTTTTTTTTTTAAAAAAAAATGTATCCTCAACGTATCAGTATCCTAGTTTTGTAGAAATTGATGTATCCTCATATCCTATTGCATCTGTATCTCGTATATGTATCAGTGCCTGTGCTTCATAGGTGTGTGTGTTGTGTTTTTCTAGAGAGTGTGTTTATATATTTATTTATATGTTATTCCTGTTACTTATGGATACCAAATTTGTTTCAGATTCCATTTTCTGAGTCATTCCCACAGCACATTAGTTCCCCTGGTCCTGTCATGTGCCCACCAATGGATTACTTTGCTACCCTCTTGTTGGGGCTAGTCAATAATGTTATACCTTCCTTACAGACATCAAAATCTGGAACGGAAAGTGATACTTCAAGTAATTCAATGCGTCCATCGCATAACAAAGCCCCTGGGACAACCCCACCGGGGGCAACAAGTGCTCCCGAGAGCCAAAAGGCATTTTATCAAATTCAGGACCCTGGCACATATACTCAACTTGTTCTTGAAACAGCAGTCATAGAATTACTTTCTCTCCCTGTCTCAGCTGGTCAGATTGTGTCATCGCTAGTTCAAATTGTTGTCAACATACAACCTACACTAATTCAATCAAGCAACAATTTGCATGGAGCTCCGAGCAGTATGGGTCAGGGATCAGCATTACCGACATCTCCATCTGGAGGAAGCACAGACTCCTTGAATGCCGGAAGATCAAATACCTCAGTATCTGGAATAAATACTCCGAACTTTGTTTCACGAAGTGGGTATACATGCCAACAACTTTCTAGCCTAATGATCCAAGCATGTGGTCTACTACTTGCGCAGCTTCCTCAAGAATTTCATGTACAACTGTATCTAGAGGCATCACGCATTATAAAAGAAACTTGGTGGTTGTTTGATGCAACAAGATCCTTGGGAGAACTAAACTCTGCTGTTGGTTATTCGTTGATGGATCCAACATGGGCAGCACAAGACAATACCTCAACGGCTATTGGTATGCTATATGTTATTTACTAATTAACCTTATTCCCTTTGACAACATAAACCTTCATTTCTGCTCACAAGTTGATGCATCTTTTAGGTAACACGGTTGCACTTCTTCACTCCTTATTCAGTAACCTTCCACAGGAATGGCTAGAAGGGGCCCATGTGATTATCAAACATCTCAGACCCGTCACATCAGTAGCAATGCTGAGAATAGTTTTCCGTATCATGGGTCCACTGCTCCCCAAACTTGCCAATGCTCATAGCTTATTTTGTAAGGTAGGCTAATGAAGTAATGATCATTGGTTATCAAAAATGGAAATTTACGTTTCAGTTCAGCATAAAGTTATTTCTGAGTTATTTTACTGAACTTTCTTTATACCCACGCTGAAAAGAACAGATTCTATATAATGCAAGTTTTTAAAGTGTAAGTCTGTAATAGATGAAAGTTATTAGACATAATTCTCAAATACAAGTATTGTACCGTAACTTTTTAAAGTGTAAGGCTGCCATAAATTGTCAAAGTACTGTAACTTGTTATAGTATGCATGTAAATATAGGAGCTTATTAGTCTTTTGTCCTTTATTGTAATTTTACTATTTTTAATTTAGGGCTTCGATGTATGACTATATATTTGAACTTTAATGTTTAGAATGAGTAAGCAGTTGTCTCATATTCTGGTCTAACATTATCATAACTAACCAATAACTTAAGTCTCCAACACAAGCTATTTATAGGCTGTCAAGTATTGTAACTAACCCATAACCAACCCAAACTAGCCTGACTAACCAACTAAATAATTTAGTAACTAACAACCTCTCCAATCGATTGGTACAAAAGAAAATACAAAAAGCTAGCTTTTAAACGGCTAGTAGTACAAGAATATGAAAATACTAATAAGCCCTTGCATCAATATATAAATATTAGTTTTTTTTTACTTGGTCATCGCATGAGCTTATAAGATTTTAGTGTTAAAAGTTTGATATGAGATTGGATGCACCCTCATTTATTTTTTAAAAAATATTTAAAAATATCTATACACACAGTTCAATTCATTATTACAAATACATAGATATATATATAGATATATAGAAAGTTAGAAACATAGATATATAATCTTCTTTTTTAAGTATTGCAGGTTATACAGGTGAATTGTCCATATGAGATATTAGAAAAAACTTGTCACAGTTGTTACTTTTTGATAAAAAAAATTTATCTTCCACTGTGGCAGTTGGGGTAGAAGTTATTTGTTGCTATAACACATCATTTACCATAACACGAATTTATTGGTTAATGGTATATGGATTAGGAGTTTAATTCTTGTATTTGTATAGCTAATTATGGTCTATTGTTCTCCAGACTCTCTCCTCACTTTTGAGTGTAATGGTGGATGTATTTGGGAAGAACTCACAAACATCAATACCAGTCGAAGCCGCAGAAATATCAGACCTCATTGACTTTCTGTAAGTGACAATGAAAAGAATTTACTCAAATGTTCTGTTCTGTATGCTCGAAGACACTGATACACACGGTCATTTTGCTTTCAGCCACCATGTTGTCCATTATGAAGGGCAGGGAGGGCCTGTTGTAGCTAACAGCAAGCCTCGACAAGAAGTTTTGGCCATTATAGGAAGAGCTTTGGAAAATCTGCGTCCAGATGTGCAACACCTCCTTTCCCACTTGAAGCCTGACACTAGTTCTTCTATCTATGCAGCAACACATCCCAAGCTGGTTCAAAATCCAGCTTGA

mRNA sequence

ATGAAGTTCAGATCTTATTCTCCTTTACTGCAGCATTTAGCACAAAGAAACCCATCCCTATTGAGCAAACCAGGGGTTACACTTCTAGTGCTTGAAATTCTGAACTATCGGCTGCTTCCTCTTTACAGGTACCAAGGCAAGAGTAAGGCTTTGATGTATGATGTGACAAAAATAATTTCTGCACTTAAAGGAAAGCGTGGAGACCATCGAGTATTTAGATTGGCTGAAAACTTGTGCATGAATCTTATTTTTTCATTAAGAGATTTTTTCTTTGTGAAAAGGGAAGGGAAGGGGCCAACTGAATTTACAGAGACACTAAATCGATTAGCTGTGGTCACTCTTGCTATCCTCATTAAAACACGGGGAATAGCTGATGCTGATCACTTGCTTTATCTTCAAACAATGCTAGAGCAGACAATGGCCACCAGCCAACATACTTGGTCAGAAAAAACTCTCCGATACTTCCCGCCTGTTCTTCGTGAAGTGTTGATTGGAAGAATAGATAAAAGAGGTGTAGCTATTCAAGCATGGCAGCAGGCAGAAACCACTGTGATCAACCAATGCAACCAACTTCTTGCCCCATCAGCTGATCCGGCATATGTGATGACCTACATCAGTCATAGTTTTCCGCAGCATAAACAATATCTATGTGCTGGTGCATGGATAATTATGCAAGGGCATCCTGAAAATATTAACTGCACCACCTTGGCACGGGTATTGAGAGAATTTTCACCAGAAGAAGTTACAGCTAATATTTACACAATGGTAGATGTGCTGCTTCATCACATTCAGATTGAACCTCAGCATGGACATTCCACACAGGATATTTTGCTTAAAGTTTGTGCCAATCTTTCATTTTTTGTATGGACTCAAGAATTACTTCCTCTTGATATTCTGCTCCTAGCTTTCATTGACCGTGATGATGATCCCAATGCTCTACGCATAGTGACTAATCTACTTGATAGGCAAGAGCTTCACCAACGAGTCAAACTATATTGTATCAGCCGGGGTTCACCTGAGCACTGGCTTCACTCTGTAGTGTTCAAAAGAAATGATTTACAAAAGGCTCTTGGGAATCATCTTTCTTGGAAGGACAGGTATCCTGTATTTTTTGACGACATTGCAGCTCGATTACTTCCAGTCATTCCATTGATAGTTTATAGGCTCATTGAAAATGATGCTGTAGATCAAGCTGATAGAGTGCTGGCCTTGTATTCTCCATTTTTGGCCTACCACCCTCTTAGATTTACATTTGTTCGTGATATACTCGCATACTTCTATAGTCATCTATCCAACAAGCTCATTGTTCGAATTTTGTATGTACTTGATATCAGCAAGATTCCATTTTCTGAGTCATTCCCACAGCACATTAGTTCCCCTGGTCCTGTCATGTGCCCACCAATGGATTACTTTGCTACCCTCTTGTTGGGGCTAGTCAATAATGTTATACCTTCCTTACAGACATCAAAATCTGGAACGGAAAGTGATACTTCAAGTAATTCAATGCGTCCATCGCATAACAAAGCCCCTGGGACAACCCCACCGGGGGCAACAAGTGCTCCCGAGAGCCAAAAGGCATTTTATCAAATTCAGGACCCTGGCACATATACTCAACTTGTTCTTGAAACAGCAGTCATAGAATTACTTTCTCTCCCTGTCTCAGCTGGTCAGATTGTGTCATCGCTAGTTCAAATTGTTGTCAACATACAACCTACACTAATTCAATCAAGCAACAATTTGCATGGAGCTCCGAGCAGTATGGGTCAGGGATCAGCATTACCGACATCTCCATCTGGAGGAAGCACAGACTCCTTGAATGCCGGAAGATCAAATACCTCAGTATCTGGAATAAATACTCCGAACTTTGTTTCACGAAGTGGGTATACATGCCAACAACTTTCTAGCCTAATGATCCAAGCATGTGGTCTACTACTTGCGCAGCTTCCTCAAGAATTTCATGTACAACTGTATCTAGAGGCATCACGCATTATAAAAGAAACTTGGTGGTTGTTTGATGCAACAAGATCCTTGGGAGAACTAAACTCTGCTGTTGGTTATTCGTTGATGGATCCAACATGGGCAGCACAAGACAATACCTCAACGGCTATTGGTAACACGGTTGCACTTCTTCACTCCTTATTCAGTAACCTTCCACAGGAATGGCTAGAAGGGGCCCATGTGATTATCAAACATCTCAGACCCGTCACATCAGTAGCAATGCTGAGAATAGTTTTCCGTATCATGGGTCCACTGCTCCCCAAACTTGCCAATGCTCATAGCTTATTTTGTAAGACTCTCTCCTCACTTTTGAGTGTAATGGTGGATGTATTTGGGAAGAACTCACAAACATCAATACCAGTCGAAGCCGCAGAAATATCAGACCTCATTGACTTTCTCCACCATGTTGTCCATTATGAAGGGCAGGGAGGGCCTGTTGTAGCTAACAGCAAGCCTCGACAAGAAGTTTTGGCCATTATAGGAAGAGCTTTGGAAAATCTGCGTCCAGATGTGCAACACCTCCTTTCCCACTTGAAGCCTGACACTAGTTCTTCTATCTATGCAGCAACACATCCCAAGCTGGTTCAAAATCCAGCTTGA

Coding sequence (CDS)

ATGAAGTTCAGATCTTATTCTCCTTTACTGCAGCATTTAGCACAAAGAAACCCATCCCTATTGAGCAAACCAGGGGTTACACTTCTAGTGCTTGAAATTCTGAACTATCGGCTGCTTCCTCTTTACAGGTACCAAGGCAAGAGTAAGGCTTTGATGTATGATGTGACAAAAATAATTTCTGCACTTAAAGGAAAGCGTGGAGACCATCGAGTATTTAGATTGGCTGAAAACTTGTGCATGAATCTTATTTTTTCATTAAGAGATTTTTTCTTTGTGAAAAGGGAAGGGAAGGGGCCAACTGAATTTACAGAGACACTAAATCGATTAGCTGTGGTCACTCTTGCTATCCTCATTAAAACACGGGGAATAGCTGATGCTGATCACTTGCTTTATCTTCAAACAATGCTAGAGCAGACAATGGCCACCAGCCAACATACTTGGTCAGAAAAAACTCTCCGATACTTCCCGCCTGTTCTTCGTGAAGTGTTGATTGGAAGAATAGATAAAAGAGGTGTAGCTATTCAAGCATGGCAGCAGGCAGAAACCACTGTGATCAACCAATGCAACCAACTTCTTGCCCCATCAGCTGATCCGGCATATGTGATGACCTACATCAGTCATAGTTTTCCGCAGCATAAACAATATCTATGTGCTGGTGCATGGATAATTATGCAAGGGCATCCTGAAAATATTAACTGCACCACCTTGGCACGGGTATTGAGAGAATTTTCACCAGAAGAAGTTACAGCTAATATTTACACAATGGTAGATGTGCTGCTTCATCACATTCAGATTGAACCTCAGCATGGACATTCCACACAGGATATTTTGCTTAAAGTTTGTGCCAATCTTTCATTTTTTGTATGGACTCAAGAATTACTTCCTCTTGATATTCTGCTCCTAGCTTTCATTGACCGTGATGATGATCCCAATGCTCTACGCATAGTGACTAATCTACTTGATAGGCAAGAGCTTCACCAACGAGTCAAACTATATTGTATCAGCCGGGGTTCACCTGAGCACTGGCTTCACTCTGTAGTGTTCAAAAGAAATGATTTACAAAAGGCTCTTGGGAATCATCTTTCTTGGAAGGACAGGTATCCTGTATTTTTTGACGACATTGCAGCTCGATTACTTCCAGTCATTCCATTGATAGTTTATAGGCTCATTGAAAATGATGCTGTAGATCAAGCTGATAGAGTGCTGGCCTTGTATTCTCCATTTTTGGCCTACCACCCTCTTAGATTTACATTTGTTCGTGATATACTCGCATACTTCTATAGTCATCTATCCAACAAGCTCATTGTTCGAATTTTGTATGTACTTGATATCAGCAAGATTCCATTTTCTGAGTCATTCCCACAGCACATTAGTTCCCCTGGTCCTGTCATGTGCCCACCAATGGATTACTTTGCTACCCTCTTGTTGGGGCTAGTCAATAATGTTATACCTTCCTTACAGACATCAAAATCTGGAACGGAAAGTGATACTTCAAGTAATTCAATGCGTCCATCGCATAACAAAGCCCCTGGGACAACCCCACCGGGGGCAACAAGTGCTCCCGAGAGCCAAAAGGCATTTTATCAAATTCAGGACCCTGGCACATATACTCAACTTGTTCTTGAAACAGCAGTCATAGAATTACTTTCTCTCCCTGTCTCAGCTGGTCAGATTGTGTCATCGCTAGTTCAAATTGTTGTCAACATACAACCTACACTAATTCAATCAAGCAACAATTTGCATGGAGCTCCGAGCAGTATGGGTCAGGGATCAGCATTACCGACATCTCCATCTGGAGGAAGCACAGACTCCTTGAATGCCGGAAGATCAAATACCTCAGTATCTGGAATAAATACTCCGAACTTTGTTTCACGAAGTGGGTATACATGCCAACAACTTTCTAGCCTAATGATCCAAGCATGTGGTCTACTACTTGCGCAGCTTCCTCAAGAATTTCATGTACAACTGTATCTAGAGGCATCACGCATTATAAAAGAAACTTGGTGGTTGTTTGATGCAACAAGATCCTTGGGAGAACTAAACTCTGCTGTTGGTTATTCGTTGATGGATCCAACATGGGCAGCACAAGACAATACCTCAACGGCTATTGGTAACACGGTTGCACTTCTTCACTCCTTATTCAGTAACCTTCCACAGGAATGGCTAGAAGGGGCCCATGTGATTATCAAACATCTCAGACCCGTCACATCAGTAGCAATGCTGAGAATAGTTTTCCGTATCATGGGTCCACTGCTCCCCAAACTTGCCAATGCTCATAGCTTATTTTGTAAGACTCTCTCCTCACTTTTGAGTGTAATGGTGGATGTATTTGGGAAGAACTCACAAACATCAATACCAGTCGAAGCCGCAGAAATATCAGACCTCATTGACTTTCTCCACCATGTTGTCCATTATGAAGGGCAGGGAGGGCCTGTTGTAGCTAACAGCAAGCCTCGACAAGAAGTTTTGGCCATTATAGGAAGAGCTTTGGAAAATCTGCGTCCAGATGTGCAACACCTCCTTTCCCACTTGAAGCCTGACACTAGTTCTTCTATCTATGCAGCAACACATCCCAAGCTGGTTCAAAATCCAGCTTGA

Protein sequence

MKFRSYSPLLQHLAQRNPSLLSKPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRGIADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLIGRIDKRGVAIQAWQQAETTVINQCNQLLAPSADPAYVMTYISHSFPQHKQYLCAGAWIIMQGHPENINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLAFIDRDDDPNALRIVTNLLDRQELHQRVKLYCISRGSPEHWLHSVVFKRNDLQKALGNHLSWKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLALYSPFLAYHPLRFTFVRDILAYFYSHLSNKLIVRILYVLDISKIPFSESFPQHISSPGPVMCPPMDYFATLLLGLVNNVIPSLQTSKSGTESDTSSNSMRPSHNKAPGTTPPGATSAPESQKAFYQIQDPGTYTQLVLETAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLHGAPSSMGQGSALPTSPSGGSTDSLNAGRSNTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHVQLYLEASRIIKETWWLFDATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRPVTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQTSIPVEAAEISDLIDFLHHVVHYEGQGGPVVANSKPRQEVLAIIGRALENLRPDVQHLLSHLKPDTSSSIYAATHPKLVQNPA

Homology

[Close]

BLAST of HG10009556 vs. NCBI nr
Match: XP_023551559.1 (mediator of RNA polymerase II transcription subunit 23 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1631.7 bits (4224), Expect = 0.0e+00
Identity = 829/863 (96.06%), Postives = 842/863 (97.57%), Query Frame = 0


Query: 3    FRSYSPLLQHLAQRNPSLLSKPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISAL 62
            FRS+     HLAQ+NPSLLSKPGVTLLVLEILNYRLLPLYRY+GKSKALMYDVTKIISAL
Sbjct: 751  FRSH---FNHLAQKNPSLLSKPGVTLLVLEILNYRLLPLYRYEGKSKALMYDVTKIISAL 810

Query: 63   KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG 122
            KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG
Sbjct: 811  KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG 870

Query: 123  IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLIGRIDKRGVAIQAWQQAET 182
            IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLRE LIGRIDKRGVAIQAWQQAET
Sbjct: 871  IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREALIGRIDKRGVAIQAWQQAET 930

Query: 183  TVINQCNQLLAPSADPAYVMTYISHSFPQHKQYLCAGAWIIMQGHPENINCTTLARVLRE 242
            TVINQCNQLL+PSADP YV+TYISHSFPQHKQYLCAGAWI+MQGHPENINCTTLARVLRE
Sbjct: 931  TVINQCNQLLSPSADPTYVITYISHSFPQHKQYLCAGAWILMQGHPENINCTTLARVLRE 990

Query: 243  FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA 302
            FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA
Sbjct: 991  FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA 1050

Query: 303  FIDRDDDPNALRIVTNLLDRQELHQRVKLYCISRGSPEHWLHSVVFKRNDLQKALGNHLS 362
            FIDRDDDPNALRIV +LLDRQEL QRVKLYCI+R SPEHWLHS VFKRNDLQKALGNHLS
Sbjct: 1051 FIDRDDDPNALRIVISLLDRQELQQRVKLYCINRVSPEHWLHSAVFKRNDLQKALGNHLS 1110

Query: 363  WKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLALYSPFLAYHPLRFTFVRDI 422
            WKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLA+YSPFLAYHPLRFTFVRDI
Sbjct: 1111 WKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDI 1170

Query: 423  LAYFYSHLSNKLIVRILYVLDISKIPFSESFPQHISSPGPVMCPPMDYFATLLLGLVNNV 482
            LAYFY HL NKLIVRILYVLDISKIPFSESFP +ISSPGPVMCPPMDYFATLLLG+VNNV
Sbjct: 1171 LAYFYGHLPNKLIVRILYVLDISKIPFSESFPHYISSPGPVMCPPMDYFATLLLGIVNNV 1230

Query: 483  IPSLQTSKSGTESDTSSNSMRPSHNKAPGTTPPGATSAPESQKAFYQIQDPGTYTQLVLE 542
            IPSLQTSK GT SDTSSNSMRPSHNKAPGTTPPGATSA ESQKAFYQIQDPGTYTQLVLE
Sbjct: 1231 IPSLQTSKPGTASDTSSNSMRPSHNKAPGTTPPGATSASESQKAFYQIQDPGTYTQLVLE 1290

Query: 543  TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLHGAPSSMGQGSALPTSPSGGST 602
            TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNN HGAPSSMGQGSALPTSPSGGST
Sbjct: 1291 TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNFHGAPSSMGQGSALPTSPSGGST 1350

Query: 603  DSLNAGRSNTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHVQLYLEASR 662
            DSLNAGRSNTS SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHVQLYLEASR
Sbjct: 1351 DSLNAGRSNTSASGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHVQLYLEASR 1410

Query: 663  IIKETWWLFDATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWL 722
            IIKETWWL DATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWL
Sbjct: 1411 IIKETWWLSDATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWL 1470

Query: 723  EGAHVIIKHLRPVTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQ 782
            EGAHVIIKHLRPVTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSV+VDVFGKN+Q
Sbjct: 1471 EGAHVIIKHLRPVTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSVLVDVFGKNTQ 1530

Query: 783  TSIPVEAAEISDLIDFLHHVVHYEGQGGPVVANSKPRQEVLAIIGRALENLRPDVQHLLS 842
            TSIPVEAAEISDLIDFLHHVVHYEGQGGPVVANSKPRQEVL IIGRALENLRPDVQHLLS
Sbjct: 1531 TSIPVEAAEISDLIDFLHHVVHYEGQGGPVVANSKPRQEVLGIIGRALENLRPDVQHLLS 1590

Query: 843  HLKPDTSSSIYAATHPKLVQNPA 866
            HLKPDTSSSIYAATHPKLVQNPA
Sbjct: 1591 HLKPDTSSSIYAATHPKLVQNPA 1610

[Close]

BLAST of HG10009556 vs. NCBI nr
Match: XP_016898808.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 23 isoform X2 [Cucumis melo])

HSP 1 Score: 1631.3 bits (4223), Expect = 0.0e+00
Identity = 832/863 (96.41%), Postives = 845/863 (97.91%), Query Frame = 0


Query: 3    FRSYSPLLQHLAQRNPSLLSKPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISAL 62
            FRS+     HLAQRNPSLLS+PGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISAL
Sbjct: 705  FRSH---FNHLAQRNPSLLSRPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISAL 764

Query: 63   KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG 122
            KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG
Sbjct: 765  KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG 824

Query: 123  IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLIGRIDKRGVAIQAWQQAET 182
            IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLIGRIDKRGVAIQAWQQAET
Sbjct: 825  IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLIGRIDKRGVAIQAWQQAET 884

Query: 183  TVINQCNQLLAPSADPAYVMTYISHSFPQHKQYLCAGAWIIMQGHPENINCTTLARVLRE 242
            TVINQCNQLL+PSADP YVMTYISHSFPQHKQYLCAGAWI+MQGHPE+INCTTLARVLRE
Sbjct: 885  TVINQCNQLLSPSADPTYVMTYISHSFPQHKQYLCAGAWILMQGHPESINCTTLARVLRE 944

Query: 243  FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA 302
            FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA
Sbjct: 945  FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA 1004

Query: 303  FIDRDDDPNALRIVTNLLDRQELHQRVKLYCISRGSPEHWLHSVVFKRNDLQKALGNHLS 362
            FIDRDDDPNALRIV +LLDRQEL QRVKLYCISRGSPEHWLHSVVFKRN+LQKALGNHLS
Sbjct: 1005 FIDRDDDPNALRIVISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRNELQKALGNHLS 1064

Query: 363  WKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLALYSPFLAYHPLRFTFVRDI 422
            WKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLA+YSPFLAYHPLRFTFVRDI
Sbjct: 1065 WKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDI 1124

Query: 423  LAYFYSHLSNKLIVRILYVLDISKIPFSESFPQHISSPGPVMCPPMDYFATLLLGLVNNV 482
            LAYFYSHL NKLIVRILYVLDISKIPFSESFPQHISS GPVMCPPMDYFATLLLGLVNNV
Sbjct: 1125 LAYFYSHLPNKLIVRILYVLDISKIPFSESFPQHISSAGPVMCPPMDYFATLLLGLVNNV 1184

Query: 483  IPSLQTSKSGTESDTSSNSMRPSHNKAPGTTPPGATSAPESQKAFYQIQDPGTYTQLVLE 542
            IPSLQTSKSGT  D SS+SMRPSHNKAPGT PP ATSAPESQKAFYQIQDPGTYTQLVLE
Sbjct: 1185 IPSLQTSKSGTAGDASSSSMRPSHNKAPGTNPPVATSAPESQKAFYQIQDPGTYTQLVLE 1244

Query: 543  TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLHGAPSSMGQGSALPTSPSGGST 602
            TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLH APSSMGQGSALPTSPSGGST
Sbjct: 1245 TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLHVAPSSMGQGSALPTSPSGGST 1304

Query: 603  DSLNAGRSNTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHVQLYLEASR 662
            DSLNAGRSNTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFH QLYLEASR
Sbjct: 1305 DSLNAGRSNTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHGQLYLEASR 1364

Query: 663  IIKETWWLFDATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWL 722
            IIKETWWL DATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWL
Sbjct: 1365 IIKETWWLSDATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWL 1424

Query: 723  EGAHVIIKHLRPVTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQ 782
            EGAHVIIKHLRPVTSVAMLRIVFRI+GPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQ
Sbjct: 1425 EGAHVIIKHLRPVTSVAMLRIVFRIIGPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQ 1484

Query: 783  TSIPVEAAEISDLIDFLHHVVHYEGQGGPVVANSKPRQEVLAIIGRALENLRPDVQHLLS 842
            TSIPVEAAEI+DLIDFLHHVVHYEGQGGPVVA+SKPRQEVLAIIGRALENLRPDVQHLLS
Sbjct: 1485 TSIPVEAAEIADLIDFLHHVVHYEGQGGPVVASSKPRQEVLAIIGRALENLRPDVQHLLS 1544

Query: 843  HLKPDTSSSIYAATHPKLVQNPA 866
            HLKPDT+SSIYAATHPKLVQNPA
Sbjct: 1545 HLKPDTTSSIYAATHPKLVQNPA 1564

[Close]

BLAST of HG10009556 vs. NCBI nr
Match: XP_008467111.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 23 isoform X1 [Cucumis melo] >KAA0046342.1 mediator of RNA polymerase II transcription subunit 23 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1631.3 bits (4223), Expect = 0.0e+00
Identity = 832/863 (96.41%), Postives = 845/863 (97.91%), Query Frame = 0


Query: 3    FRSYSPLLQHLAQRNPSLLSKPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISAL 62
            FRS+     HLAQRNPSLLS+PGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISAL
Sbjct: 750  FRSH---FNHLAQRNPSLLSRPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISAL 809

Query: 63   KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG 122
            KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG
Sbjct: 810  KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG 869

Query: 123  IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLIGRIDKRGVAIQAWQQAET 182
            IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLIGRIDKRGVAIQAWQQAET
Sbjct: 870  IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLIGRIDKRGVAIQAWQQAET 929

Query: 183  TVINQCNQLLAPSADPAYVMTYISHSFPQHKQYLCAGAWIIMQGHPENINCTTLARVLRE 242
            TVINQCNQLL+PSADP YVMTYISHSFPQHKQYLCAGAWI+MQGHPE+INCTTLARVLRE
Sbjct: 930  TVINQCNQLLSPSADPTYVMTYISHSFPQHKQYLCAGAWILMQGHPESINCTTLARVLRE 989

Query: 243  FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA 302
            FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA
Sbjct: 990  FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA 1049

Query: 303  FIDRDDDPNALRIVTNLLDRQELHQRVKLYCISRGSPEHWLHSVVFKRNDLQKALGNHLS 362
            FIDRDDDPNALRIV +LLDRQEL QRVKLYCISRGSPEHWLHSVVFKRN+LQKALGNHLS
Sbjct: 1050 FIDRDDDPNALRIVISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRNELQKALGNHLS 1109

Query: 363  WKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLALYSPFLAYHPLRFTFVRDI 422
            WKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLA+YSPFLAYHPLRFTFVRDI
Sbjct: 1110 WKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDI 1169

Query: 423  LAYFYSHLSNKLIVRILYVLDISKIPFSESFPQHISSPGPVMCPPMDYFATLLLGLVNNV 482
            LAYFYSHL NKLIVRILYVLDISKIPFSESFPQHISS GPVMCPPMDYFATLLLGLVNNV
Sbjct: 1170 LAYFYSHLPNKLIVRILYVLDISKIPFSESFPQHISSAGPVMCPPMDYFATLLLGLVNNV 1229

Query: 483  IPSLQTSKSGTESDTSSNSMRPSHNKAPGTTPPGATSAPESQKAFYQIQDPGTYTQLVLE 542
            IPSLQTSKSGT  D SS+SMRPSHNKAPGT PP ATSAPESQKAFYQIQDPGTYTQLVLE
Sbjct: 1230 IPSLQTSKSGTAGDASSSSMRPSHNKAPGTNPPVATSAPESQKAFYQIQDPGTYTQLVLE 1289

Query: 543  TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLHGAPSSMGQGSALPTSPSGGST 602
            TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLH APSSMGQGSALPTSPSGGST
Sbjct: 1290 TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLHVAPSSMGQGSALPTSPSGGST 1349

Query: 603  DSLNAGRSNTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHVQLYLEASR 662
            DSLNAGRSNTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFH QLYLEASR
Sbjct: 1350 DSLNAGRSNTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHGQLYLEASR 1409

Query: 663  IIKETWWLFDATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWL 722
            IIKETWWL DATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWL
Sbjct: 1410 IIKETWWLSDATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWL 1469

Query: 723  EGAHVIIKHLRPVTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQ 782
            EGAHVIIKHLRPVTSVAMLRIVFRI+GPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQ
Sbjct: 1470 EGAHVIIKHLRPVTSVAMLRIVFRIIGPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQ 1529

Query: 783  TSIPVEAAEISDLIDFLHHVVHYEGQGGPVVANSKPRQEVLAIIGRALENLRPDVQHLLS 842
            TSIPVEAAEI+DLIDFLHHVVHYEGQGGPVVA+SKPRQEVLAIIGRALENLRPDVQHLLS
Sbjct: 1530 TSIPVEAAEIADLIDFLHHVVHYEGQGGPVVASSKPRQEVLAIIGRALENLRPDVQHLLS 1589

Query: 843  HLKPDTSSSIYAATHPKLVQNPA 866
            HLKPDT+SSIYAATHPKLVQNPA
Sbjct: 1590 HLKPDTTSSIYAATHPKLVQNPA 1609

[Close]

BLAST of HG10009556 vs. NCBI nr
Match: KAG6579266.1 (Mediator of RNA polymerase II transcription subunit 23, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1630.2 bits (4220), Expect = 0.0e+00
Identity = 828/863 (95.94%), Postives = 841/863 (97.45%), Query Frame = 0


Query: 3    FRSYSPLLQHLAQRNPSLLSKPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISAL 62
            FRS+     HLAQ+NPSLLSKPGVTLLVLEILNYRLLPLYRY+GKSKALMYDVTKIISAL
Sbjct: 751  FRSH---FNHLAQKNPSLLSKPGVTLLVLEILNYRLLPLYRYEGKSKALMYDVTKIISAL 810

Query: 63   KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG 122
            KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG
Sbjct: 811  KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG 870

Query: 123  IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLIGRIDKRGVAIQAWQQAET 182
            IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLRE LIGRIDKRGVAIQAWQQAET
Sbjct: 871  IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREALIGRIDKRGVAIQAWQQAET 930

Query: 183  TVINQCNQLLAPSADPAYVMTYISHSFPQHKQYLCAGAWIIMQGHPENINCTTLARVLRE 242
            TVINQCNQLL+PSADP YV+TYISHSFPQHKQYLCAGAWI+MQGHPENINCTTLARVLRE
Sbjct: 931  TVINQCNQLLSPSADPTYVITYISHSFPQHKQYLCAGAWILMQGHPENINCTTLARVLRE 990

Query: 243  FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA 302
            FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA
Sbjct: 991  FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA 1050

Query: 303  FIDRDDDPNALRIVTNLLDRQELHQRVKLYCISRGSPEHWLHSVVFKRNDLQKALGNHLS 362
            FIDRDDDPNALRIV +LLDRQEL QRVKLYCI+R SPEHWLHS  FKRNDLQKALGNHLS
Sbjct: 1051 FIDRDDDPNALRIVISLLDRQELQQRVKLYCINRVSPEHWLHSAAFKRNDLQKALGNHLS 1110

Query: 363  WKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLALYSPFLAYHPLRFTFVRDI 422
            WKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLA+YSPFLAYHPLRFTFVRDI
Sbjct: 1111 WKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDI 1170

Query: 423  LAYFYSHLSNKLIVRILYVLDISKIPFSESFPQHISSPGPVMCPPMDYFATLLLGLVNNV 482
            LAYFY HL NKLIVRILYVLDISKIPFSESFP +ISSPGPVMCPPMDYFATLLLG+VNNV
Sbjct: 1171 LAYFYGHLPNKLIVRILYVLDISKIPFSESFPHYISSPGPVMCPPMDYFATLLLGIVNNV 1230

Query: 483  IPSLQTSKSGTESDTSSNSMRPSHNKAPGTTPPGATSAPESQKAFYQIQDPGTYTQLVLE 542
            IPSLQTSK GT SDTSSNSMRPSHNKAPGTTPPGATSA ESQKAFYQIQDPGTYTQLVLE
Sbjct: 1231 IPSLQTSKPGTASDTSSNSMRPSHNKAPGTTPPGATSASESQKAFYQIQDPGTYTQLVLE 1290

Query: 543  TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLHGAPSSMGQGSALPTSPSGGST 602
            TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNN HGAPSSMGQGSALPTSPSGGST
Sbjct: 1291 TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNFHGAPSSMGQGSALPTSPSGGST 1350

Query: 603  DSLNAGRSNTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHVQLYLEASR 662
            DSLNAGRSNTS SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHVQLYLEASR
Sbjct: 1351 DSLNAGRSNTSASGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHVQLYLEASR 1410

Query: 663  IIKETWWLFDATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWL 722
            IIKETWWL DATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWL
Sbjct: 1411 IIKETWWLSDATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWL 1470

Query: 723  EGAHVIIKHLRPVTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQ 782
            EGAHVIIKHLRPVTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSV+VDVFGKN+Q
Sbjct: 1471 EGAHVIIKHLRPVTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSVLVDVFGKNTQ 1530

Query: 783  TSIPVEAAEISDLIDFLHHVVHYEGQGGPVVANSKPRQEVLAIIGRALENLRPDVQHLLS 842
            TSIPVEAAEISDLIDFLHHVVHYEGQGGPVVANSKPRQEVL IIGRALENLRPDVQHLLS
Sbjct: 1531 TSIPVEAAEISDLIDFLHHVVHYEGQGGPVVANSKPRQEVLGIIGRALENLRPDVQHLLS 1590

Query: 843  HLKPDTSSSIYAATHPKLVQNPA 866
            HLKPDTSSSIYAATHPKLVQNPA
Sbjct: 1591 HLKPDTSSSIYAATHPKLVQNPA 1610

[Close]

BLAST of HG10009556 vs. NCBI nr
Match: KAG7016782.1 (Mediator of RNA polymerase II transcription subunit 23 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1628.2 bits (4215), Expect = 0.0e+00
Identity = 827/863 (95.83%), Postives = 841/863 (97.45%), Query Frame = 0


Query: 3    FRSYSPLLQHLAQRNPSLLSKPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISAL 62
            FRS+     HLAQ+NPSLLSKPGVTLLVLEILNYRLLPLYRY+GKSKALMYDVTKIISAL
Sbjct: 751  FRSH---FNHLAQKNPSLLSKPGVTLLVLEILNYRLLPLYRYEGKSKALMYDVTKIISAL 810

Query: 63   KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG 122
            KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG
Sbjct: 811  KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG 870

Query: 123  IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLIGRIDKRGVAIQAWQQAET 182
            IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLRE LIGRIDKRGVAIQAWQQAET
Sbjct: 871  IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREALIGRIDKRGVAIQAWQQAET 930

Query: 183  TVINQCNQLLAPSADPAYVMTYISHSFPQHKQYLCAGAWIIMQGHPENINCTTLARVLRE 242
            TVINQCNQLL+PSADP YV+TYISHSFPQHKQYLCAGAWI+MQGHPENINCTTLARVLRE
Sbjct: 931  TVINQCNQLLSPSADPTYVITYISHSFPQHKQYLCAGAWILMQGHPENINCTTLARVLRE 990

Query: 243  FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA 302
            FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA
Sbjct: 991  FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA 1050

Query: 303  FIDRDDDPNALRIVTNLLDRQELHQRVKLYCISRGSPEHWLHSVVFKRNDLQKALGNHLS 362
            FIDRDDDPNALRIV +LLDRQEL QRVKLYCI+R SPEHWLHS  FKRNDLQKALGNHLS
Sbjct: 1051 FIDRDDDPNALRIVISLLDRQELQQRVKLYCINRVSPEHWLHSAAFKRNDLQKALGNHLS 1110

Query: 363  WKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLALYSPFLAYHPLRFTFVRDI 422
            WKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLA+YSPFLAYHPLRFTFVRDI
Sbjct: 1111 WKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDI 1170

Query: 423  LAYFYSHLSNKLIVRILYVLDISKIPFSESFPQHISSPGPVMCPPMDYFATLLLGLVNNV 482
            LAYFY HL NKLIVRILYVLDISKIPFSESFP +ISSPGPVMCPPMDYFATLLLG+VNNV
Sbjct: 1171 LAYFYGHLPNKLIVRILYVLDISKIPFSESFPHYISSPGPVMCPPMDYFATLLLGIVNNV 1230

Query: 483  IPSLQTSKSGTESDTSSNSMRPSHNKAPGTTPPGATSAPESQKAFYQIQDPGTYTQLVLE 542
            IPSLQTSK GT SDTSSNSMRPSH+KAPGTTPPGATSA ESQKAFYQIQDPGTYTQLVLE
Sbjct: 1231 IPSLQTSKPGTASDTSSNSMRPSHSKAPGTTPPGATSASESQKAFYQIQDPGTYTQLVLE 1290

Query: 543  TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLHGAPSSMGQGSALPTSPSGGST 602
            TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNN HGAPSSMGQGSALPTSPSGGST
Sbjct: 1291 TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNFHGAPSSMGQGSALPTSPSGGST 1350

Query: 603  DSLNAGRSNTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHVQLYLEASR 662
            DSLNAGRSNTS SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHVQLYLEASR
Sbjct: 1351 DSLNAGRSNTSASGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHVQLYLEASR 1410

Query: 663  IIKETWWLFDATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWL 722
            IIKETWWL DATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWL
Sbjct: 1411 IIKETWWLSDATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWL 1470

Query: 723  EGAHVIIKHLRPVTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQ 782
            EGAHVIIKHLRPVTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSV+VDVFGKN+Q
Sbjct: 1471 EGAHVIIKHLRPVTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSVLVDVFGKNTQ 1530

Query: 783  TSIPVEAAEISDLIDFLHHVVHYEGQGGPVVANSKPRQEVLAIIGRALENLRPDVQHLLS 842
            TSIPVEAAEISDLIDFLHHVVHYEGQGGPVVANSKPRQEVL IIGRALENLRPDVQHLLS
Sbjct: 1531 TSIPVEAAEISDLIDFLHHVVHYEGQGGPVVANSKPRQEVLGIIGRALENLRPDVQHLLS 1590

Query: 843  HLKPDTSSSIYAATHPKLVQNPA 866
            HLKPDTSSSIYAATHPKLVQNPA
Sbjct: 1591 HLKPDTSSSIYAATHPKLVQNPA 1610

[Close]

BLAST of HG10009556 vs. ExPASy Swiss-Prot
Match: F4I4P3 (Mediator of RNA polymerase II transcription subunit 23 OS=Arabidopsis thaliana OX=3702 GN=MED23 PE=1 SV=1)

HSP 1 Score: 1275.0 bits (3298), Expect = 0.0e+00
Identity = 640/860 (74.42%), Postives = 736/860 (85.58%), Query Frame = 0


Query: 3    FRSYSPLLQHLAQRNPSLLSKPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISAL 62
            FRS+      LAQRN SLLSKPGVTLLVLEILNYRLLPLYRYQGKSK LMYDVTKIISAL
Sbjct: 749  FRSH---FSQLAQRNASLLSKPGVTLLVLEILNYRLLPLYRYQGKSKTLMYDVTKIISAL 808

Query: 63   KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG 122
            KGKRGDHR+FRLAENLCMNLI SLRDFF VKREGKGPTEFTETLNR+ ++TLAI IKTRG
Sbjct: 809  KGKRGDHRIFRLAENLCMNLILSLRDFFSVKREGKGPTEFTETLNRITIMTLAITIKTRG 868

Query: 123  IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLIGRIDKRGVAIQAWQQAET 182
            IAD DH++YLQTMLEQ +ATSQHTWSEKT+R+FP +LRE L GR+DKRG++IQAWQQAET
Sbjct: 869  IADPDHMVYLQTMLEQILATSQHTWSEKTMRHFPSLLRETLKGRVDKRGLSIQAWQQAET 928

Query: 183  TVINQCNQLLAPSADPAYVMTYISHSFPQHKQYLCAGAWIIMQGHPENINCTTLARVLRE 242
            TVINQC QLL+PSA+PAYV TY+SHSFPQH+QYLCAGA ++MQGH ENIN T LARVLRE
Sbjct: 929  TVINQCTQLLSPSAEPAYVSTYLSHSFPQHRQYLCAGACLLMQGHAENINSTNLARVLRE 988

Query: 243  FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA 302
             SPEEVTANIYT+VDVLLHH+ ++ Q G S + +L K  ANL+FF WT E+LPLDI LLA
Sbjct: 989  VSPEEVTANIYTLVDVLLHHVHVDLQQGQSLEAVLDKAGANLAFFFWTHEMLPLDIFLLA 1048

Query: 303  FIDRDDDPNALRIVTNLLDRQELHQRVKLYCISRGSPEHWLHSVVFKRNDLQKALGNHLS 362
             IDRDDDP+AL I  +LL   +L  R+K YC +RGSPEHWL + VFKRN+LQKALGNHLS
Sbjct: 1049 LIDRDDDPHALIIAMSLLKTPDLLLRIKNYCQNRGSPEHWLVTQVFKRNELQKALGNHLS 1108

Query: 363  WKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLALYSPFLAYHPLRFTFVRDI 422
            WKDRYP FFDDIAARLLPVIPL++YRLIEN+A++QAD +L  +S FLAYHPLRFTFVRDI
Sbjct: 1109 WKDRYPTFFDDIAARLLPVIPLVLYRLIENNAMEQADNLLLAHSHFLAYHPLRFTFVRDI 1168

Query: 423  LAYFYSHLSNKLIVRILYVLDISKIPFSESFPQHISSPGPVMCPPMDYFATLLLGLVNNV 482
            LAYFY HL  KL++R+L VLD+SKIPFSESFPQ+IS  G  +CPP+DYFA+LLL LVNNV
Sbjct: 1169 LAYFYGHLPGKLVLRMLKVLDLSKIPFSESFPQYISPTGAPVCPPLDYFASLLLNLVNNV 1228

Query: 483  IPSLQ-----TSKSGTESDTSSNSMRPSHNKAPGTTPPGATSAPESQKAFYQIQDPGTYT 542
            IP L      +S+SG+ +D  ++S RP H K PGT+ PG  +A E QKAFYQIQDPGTYT
Sbjct: 1229 IPPLSSSSNCSSRSGSMADILNSSARPPHGKTPGTSQPGPANASEGQKAFYQIQDPGTYT 1288

Query: 543  QLVLETAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLHGAPSSMGQGSALPTSP 602
            QLVLETAVIE+LSLPVSA QIVSSLVQI+VNIQ TLIQS N  HGA + +GQGS LPTSP
Sbjct: 1289 QLVLETAVIEILSLPVSAAQIVSSLVQIIVNIQSTLIQSGNGFHGAANGVGQGSVLPTSP 1348

Query: 603  SGGSTDSLNAGRSNTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHVQLY 662
            SGGSTDS++A RS   + GINT +FVSRSGYTCQQLS L+IQACGLLLAQLP +FHVQLY
Sbjct: 1349 SGGSTDSMSASRSTCLIPGINTASFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHVQLY 1408

Query: 663  LEASRIIKETWWLFDATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNL 722
            LEA+R+ +ETWWL D  RS GEL+SAVGY+LMDPTWAAQDNTSTAIGN VALLH+ FSNL
Sbjct: 1409 LEAARVTRETWWLKDGKRSQGELDSAVGYALMDPTWAAQDNTSTAIGNIVALLHAFFSNL 1468

Query: 723  PQEWLEGAHVIIKHLRPVTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSVMVDVF 782
            PQEWL+G + II +LRPVTSVAMLR+VFRIMGPLLP+LA+ H+LF KTL  LLS +VDVF
Sbjct: 1469 PQEWLDGTNAIITNLRPVTSVAMLRVVFRIMGPLLPRLASTHTLFNKTLMLLLSALVDVF 1528

Query: 783  GKNSQTSIPVEAAEISDLIDFLHHVVHYEGQGGPVVANSKPRQEVLAIIGRALENLRPDV 842
            GK +QT+ PVEA++I+DLIDFLHH++HYEGQGG V  +SKPR ++LA+IGRA E LRPDV
Sbjct: 1529 GKTAQTTAPVEASQIADLIDFLHHIIHYEGQGGAVQTSSKPRPDILALIGRAAETLRPDV 1588

Query: 843  QHLLSHLKPDTSSSIYAATH 858
            QHLL+HLK + +SSIYAA H
Sbjct: 1589 QHLLAHLKTNPNSSIYAAAH 1605

[Close]

BLAST of HG10009556 vs. ExPASy Swiss-Prot
Match: Q16HH9 (Mediator of RNA polymerase II transcription subunit 23 OS=Aedes aegypti OX=7159 GN=MED23 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 4.8e-11
Identity = 113/535 (21.12%), Postives = 213/535 (39.81%), Query Frame = 0


Query: 103  TETLNRLAVVTLAILIKTRGIA-DADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLRE 162
            +E LNR  ++TLA  ++  G   D     + + +L   M  + HTWS+ TL+ FPPVL +
Sbjct: 698  SEELNRALILTLARSMQITGTGNDPQSTTWCKELLNSIMQNTPHTWSQHTLQCFPPVLND 757

Query: 163  VLIGRIDKRGVAIQAWQQAETTVINQCNQLLAPSADPAY-VMTYISHSFPQHKQYLCAGA 222
            +++                +  V  +  QLL  S D  Y   T +S+       +  AG 
Sbjct: 758  LVV----------------QHNVPKENKQLLKKSVDEEYRNWTSMSNENDIIGHFGTAGT 817

Query: 223  --------WIIMQGHPENINCTTLA-RVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGH 282
                     ++ +   E    + +A ++L       ++A++  + D L+  +       H
Sbjct: 818  PGTPPLFLCLLFKMIVETDTISPVAYKILERIGARALSAHLRKLCDYLVFEVSNSGDGAH 877

Query: 283  STQDILLKVCANLSFFVWTQELLPLDILLLAFIDRDDDPNALR-----IVTNLLDRQELH 342
                 + K    ++  +W   ++ +D L+L    R  + N  +     I   LL   E  
Sbjct: 878  -----VNKCVDTINDMIWKYNIITIDRLVLCLSLRTLEGNEAQVSFCIIQLLLLKTSEFR 937

Query: 343  QRVKLYCISRGSPEHWLHSVVFKRNDLQKALGNHLSWKDRY-----------PVFFDDIA 402
             R++ + +S  SPEHW      + N  ++ L  H  + +++           PV+F ++ 
Sbjct: 938  NRLQEF-VSINSPEHWK-----QNNWHERHLAFHQKFPEKFTPDESVSHPSLPVYFGNVC 997

Query: 403  ARLLPVIPLIVYRLIENDAV--DQADRVLALYSPFLAYHPLRFTFVRDILAYFYSHLSNK 462
             R LPV+ + ++R +E  A      D +L    P   +H    T++ + L Y+   L ++
Sbjct: 998  LRFLPVLDITIHRYLEVPAAMSKTLDVLLDHLGPLYKFHDRPITYLYNTLHYYERMLRDR 1057

Query: 463  ---------LIVRILYVLDISKIPFSESFPQHISSPGPVM--CPPMDYFATLLLGLVNNV 522
                      ++  L  +       +E +  ++S     +   P ++Y+  L        
Sbjct: 1058 PQLKKRLVGTVIGSLKDVRPDNWAVTEQYQSYMSKKDDAVNWMPDLNYYIYL-------- 1117

Query: 523  IPSLQTSKSGTESDTSSNSMRPSHNKAPGTTPPGATSAPESQKAFYQIQDPGTYTQLVLE 582
            +  +Q +  GT             N  PGT              F +  +P  +    L 
Sbjct: 1118 VRRMQDTIDGT-------------NIFPGT-----------DWRFNEFPNPPAH---ALY 1168

Query: 583  TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLHGAPSSMGQ-GSALPTS 597
               +ELL LPV    + +SL+ +VV   P +   S ++H   +++G   +ALP S
Sbjct: 1178 VTCVELLGLPVGPQGVANSLIDVVVKGYPVI--PSQSVHNWINTIGLIMAALPES 1168

[Close]

BLAST of HG10009556 vs. ExPASy Swiss-Prot
Match: Q9W1X7 (Mediator of RNA polymerase II transcription subunit 23 OS=Drosophila melanogaster OX=7227 GN=MED23 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.0e-08
Identity = 141/654 (21.56%), Postives = 263/654 (40.21%), Query Frame = 0


Query: 13   LAQRNPSLLSKPGVTLL--VLEILNYRL--LPLYRYQGKSKALMYDVTKIISALKGKRGD 72
            L+Q  P++       +L  ++E+ +YRL  +P + Y+ +  +L++ ++ +    K     
Sbjct: 588  LSQLMPTVFKNHAWAMLHTLMEMFSYRLHHVPTH-YRVQLLSLLHSLSSVPQTNK----- 647

Query: 73   HRVFRLAENLCMNLIFSLRD---------FFFVKREGKGPTEFTETLNRLAVVTLAILIK 132
             ++    E+  + LI S+           +F  K  G   +  +E LNR+ ++TLA  + 
Sbjct: 648  MQLNLCFESTALRLITSIGSAEFQPQFSRYFNDKSPGAVASNESEELNRVLILTLARSMH 707

Query: 133  TRGIADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLI------GRIDKRGVA 192
              G  D +   + +  L   +  + H+W   +L  FPP L E             +   A
Sbjct: 708  VHGGGD-EMQGWCKDFLSNIIQHTPHSWPMHSLACFPPALNEYFTQNNQPPENKQQLKKA 767

Query: 193  IQAWQQAETTVINQCNQLLAPSADPAYVMTYISHSFPQHKQYLCAGAWIIMQGHPENINC 252
            ++   +  T++ N+ N ++A    P             +  +LC    II +   ENI+ 
Sbjct: 768  VEEEYRTWTSMTNE-NDIIAHFLRPT-----------TNPLFLCLLFKIIWE--TENIS- 827

Query: 253  TTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQEL 312
                ++L   S   ++ ++    D L+     E       +D + K    ++  +W   +
Sbjct: 828  PVAYKILEGISARALSTHLRKFCDYLV----AEVASSSDGRDFIHKCVDTINNMIWKFNV 887

Query: 313  LPLDILLLAFIDRDDDPNA-----LRIVTNLLDRQELHQRVKLYCISRGSPEHWLHSVVF 372
            + +D ++L    R  + N      L I   LL   EL  RV+ +C    +P+HW  S   
Sbjct: 888  VTIDRVVLCLALRTHEGNEAQVCFLIIQLLLLKASELRNRVQEFC-KDNNPDHWKQS--- 947

Query: 373  KRNDLQKALGNHLSWKDRY-----------PVFFDDIAARLLPVIPLIVYRLIENDAVDQ 432
              N   K L  H  + +++           PV+F ++  R LPV+ ++V+R IE   +  
Sbjct: 948  --NWQDKHLSFHQKYPEKFALDESASQIPLPVYFSNVCLRFLPVLDVVVHRFIEL-TITN 1007

Query: 433  ADRVLALYSPFLA----YHPLRFTFVRDILAYFYSHLSNKLIVRILYVLDISKIPFSESF 492
              ++L      L+    +H    T++ + L Y+   L ++  ++   V  I+   FSE  
Sbjct: 1008 VHQILGFILDHLSILYKFHDRPITYLYNTLHYYERILRDRPALKKKLVGAITS-AFSEIR 1067

Query: 493  PQH--ISSPGPVMCPPMDYFATLLLGLVNNVIPSLQTSKSGTESDTSSNSMRPSHNKAPG 552
            P +  +S P  V     D   T  L    ++I  L  + SG     S++        AP 
Sbjct: 1068 PPNWSVSEPYKVYLQSQDSLWTPELSYYMSLIRRLADTISGKNVFYSTDWRFNEFPNAP- 1127

Query: 553  TTPPGATSAPESQKAFYQIQDPGTYTQLVLETAVIELLSLPVSAGQIVSSLVQIVVNIQP 612
                  T A                    L    +ELL LPV+   + S+L+ ++V+   
Sbjct: 1128 ------THA--------------------LYVTCVELLGLPVAPPLVASNLIDVIVSGYA 1170

Query: 613  TLIQSSNNLHGAPSSMG-QGSALPTSPSGGSTDSLNAGRSNTSVSGINTPNFVS 625
             + Q   ++H   +++G   +ALP     G  D L           +NTPN ++
Sbjct: 1188 VIPQ--KDIHSYINAVGIVLAALPEPYWSGIYDRLQ--------DMLNTPNMLN 1170

[Close]

BLAST of HG10009556 vs. ExPASy Swiss-Prot
Match: Q55BN0 (Putative mediator of RNA polymerase II transcription subunit 23 OS=Dictyostelium discoideum OX=44689 GN=med23 PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 3.0e-05
Identity = 102/531 (19.21%), Postives = 209/531 (39.36%), Query Frame = 0


Query: 107  NRLAVVTLAILIKTRGIADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLRE----- 166
            NR  + ++A LIK +GI D + +  +   +E    ++ + +S+ TL +FP +L+      
Sbjct: 837  NRRLITSIARLIKLKGIQDFNRISDVPVFIENCFKSNPYCFSKSTLEFFPDILKNEFKKN 896

Query: 167  --------------VLIGRIDKRGVAIQAWQQAETTVINQCNQLLAPSADPAYVMTYISH 226
                           L+     + V ++  Q+ +   +    Q+L      A V  Y++ 
Sbjct: 897  SENLSLNPNQFTNLTLMKPPTLQKVQLENQQRFQLFSVGGKLQILQKQ---ALVQQYLTD 956

Query: 227  SFPQHKQYLCAGAWIIMQGHPENINCTTLARVLREFSPEEVTAN---------------- 286
            +   +   L    +I M      I    +  ++++   +++  N                
Sbjct: 957  N---NSNLLLCQVFIYML--ENKIKMDVMGPLIQQMFFKQIIGNQQPQQQQQPQQPPPLA 1016

Query: 287  -----IYTMVDVLLHHI--QIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLAFI 346
                 +  +  V +  I  ++   H    +++   V   L   ++T ++L L+ +LLA +
Sbjct: 1017 ISNQQLNRITSVFIDFIFDEVYVNHPLKQENLHQHVSEFLCQSIFTYKILTLNSVLLALL 1076

Query: 347  DRDDDPNALRIV-TNLLDRQELHQRVKLYCI----------SRGSPEHWLHSVVFKR--N 406
            DRDD P+   I+ T L    E+  R++ +             R    +++ +  F    N
Sbjct: 1077 DRDDHPSMPTILDTFLFSSAEIQNRLQFFSTYPSDFFISQSFRNDDNYFIKNCEFNNRFN 1136

Query: 407  DL------QKALGNHLSWKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLALY 466
            DL         L    +     P+++ +  +RL+P++ +I+ + IE +  D  ++ +  +
Sbjct: 1137 DLIPTVIDPNTLIEQSTQDTILPIYYSNSISRLMPIVEIIISKSIELNNGDLFEKTINHF 1196

Query: 467  S-PFLAYHPLRFTFVRDILAYFYS----HLSNKLIVRILYVLDISKIP--FSESFPQHIS 526
            + P+  Y   + T ++D L Y+Y      L+ +L +  L +L+ S I   FS  F Q + 
Sbjct: 1197 NIPYHYYQDEKETTIKDTLIYYYDSQLFKLNPELKLLFLKLLNQSDIDNRFSNIFNQFLK 1256

Query: 527  S---PGPVMCPPMDYFATLLLGLVNNVIPSLQTSKSGTESDTSSNSMRPSHNKAPGTTPP 567
            S       M     YF        N++I  L      T  +                   
Sbjct: 1257 SSRIEDITMVGSTAYF--------NDLISPLAEMMDLTNQNVFD---------------- 1316

[Close]

BLAST of HG10009556 vs. ExPASy Swiss-Prot
Match: Q60UZ5 (Mediator of RNA polymerase II transcription subunit 23 OS=Caenorhabditis briggsae OX=6238 GN=sur-2 PE=3 SV=3)

HSP 1 Score: 50.8 bits (120), Expect = 8.8e-05
Identity = 62/298 (20.81%), Postives = 116/298 (38.93%), Query Frame = 0


Query: 147  WSEKTLRYFPPVLREVLIGRIDKRGVAIQAWQQAETTVINQCNQLLAPSADPAYVMTYIS 206
            W EK+  +FP    E  I + D + +A    +   TT  ++  ++        YV+ Y  
Sbjct: 781  WPEKSTTFFPKWALEE-IKKTDVKKLAPNYAEILSTT--DEAFRMNTLLTGGQYVIRYAD 840

Query: 207  HSFPQHKQYLCAGAWIIMQ--GHPENINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQ 266
               P    Y C  A I  Q    PE    +   +V+ + SP+++      +VD ++  ++
Sbjct: 841  D--PNPITYHCMLAVIFKQLCSKPEQDLTSEYYQVMEKKSPKDIVVMGNYLVDFIIADVK 900

Query: 267  IEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLAFIDRDDDPN-ALRIVTNLLDRQ 326
                    T   + K  A + F           + L+     D+D    ++I    L   
Sbjct: 901  NNQDCNEQTFKTIAKTAALMCFHFNIHRADRFLLSLIMHPSTDEDAQICIQIANEFLLTP 960

Query: 327  ELHQRVKLYCIS-----RGSPEHWLHSVVFKRNDLQKALGNHLSWKD-------RYPVFF 386
            +  +R+K +  +        P  ++ ++V   +   +     L  K+         P ++
Sbjct: 961  KFQERIKWFYENDVPRKEKDPYEYIKAIVKYHDAFPEFEACQLVPKNDDTGTNVHMPTYY 1020

Query: 387  DDIAARLLPVIPLIVYRLIENDAVDQADRVLALYSPFLAYHPLRFTFVRDILAYFYSH 430
              +  RLLP++   VY  +E      ++ +L L S F  YHP+   F+  +L  F SH
Sbjct: 1021 GCLIERLLPILDQYVYVALEQQGYKMSNALLQLVSMFYRYHPMPIHFMYSVL--FVSH 1071

[Close]

BLAST of HG10009556 vs. ExPASy TrEMBL
Match: A0A5A7TSF1 (Mediator of RNA polymerase II transcription subunit 23 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G00510 PE=3 SV=1)

HSP 1 Score: 1631.3 bits (4223), Expect = 0.0e+00
Identity = 832/863 (96.41%), Postives = 845/863 (97.91%), Query Frame = 0


Query: 3    FRSYSPLLQHLAQRNPSLLSKPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISAL 62
            FRS+     HLAQRNPSLLS+PGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISAL
Sbjct: 750  FRSH---FNHLAQRNPSLLSRPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISAL 809

Query: 63   KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG 122
            KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG
Sbjct: 810  KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG 869

Query: 123  IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLIGRIDKRGVAIQAWQQAET 182
            IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLIGRIDKRGVAIQAWQQAET
Sbjct: 870  IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLIGRIDKRGVAIQAWQQAET 929

Query: 183  TVINQCNQLLAPSADPAYVMTYISHSFPQHKQYLCAGAWIIMQGHPENINCTTLARVLRE 242
            TVINQCNQLL+PSADP YVMTYISHSFPQHKQYLCAGAWI+MQGHPE+INCTTLARVLRE
Sbjct: 930  TVINQCNQLLSPSADPTYVMTYISHSFPQHKQYLCAGAWILMQGHPESINCTTLARVLRE 989

Query: 243  FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA 302
            FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA
Sbjct: 990  FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA 1049

Query: 303  FIDRDDDPNALRIVTNLLDRQELHQRVKLYCISRGSPEHWLHSVVFKRNDLQKALGNHLS 362
            FIDRDDDPNALRIV +LLDRQEL QRVKLYCISRGSPEHWLHSVVFKRN+LQKALGNHLS
Sbjct: 1050 FIDRDDDPNALRIVISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRNELQKALGNHLS 1109

Query: 363  WKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLALYSPFLAYHPLRFTFVRDI 422
            WKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLA+YSPFLAYHPLRFTFVRDI
Sbjct: 1110 WKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDI 1169

Query: 423  LAYFYSHLSNKLIVRILYVLDISKIPFSESFPQHISSPGPVMCPPMDYFATLLLGLVNNV 482
            LAYFYSHL NKLIVRILYVLDISKIPFSESFPQHISS GPVMCPPMDYFATLLLGLVNNV
Sbjct: 1170 LAYFYSHLPNKLIVRILYVLDISKIPFSESFPQHISSAGPVMCPPMDYFATLLLGLVNNV 1229

Query: 483  IPSLQTSKSGTESDTSSNSMRPSHNKAPGTTPPGATSAPESQKAFYQIQDPGTYTQLVLE 542
            IPSLQTSKSGT  D SS+SMRPSHNKAPGT PP ATSAPESQKAFYQIQDPGTYTQLVLE
Sbjct: 1230 IPSLQTSKSGTAGDASSSSMRPSHNKAPGTNPPVATSAPESQKAFYQIQDPGTYTQLVLE 1289

Query: 543  TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLHGAPSSMGQGSALPTSPSGGST 602
            TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLH APSSMGQGSALPTSPSGGST
Sbjct: 1290 TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLHVAPSSMGQGSALPTSPSGGST 1349

Query: 603  DSLNAGRSNTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHVQLYLEASR 662
            DSLNAGRSNTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFH QLYLEASR
Sbjct: 1350 DSLNAGRSNTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHGQLYLEASR 1409

Query: 663  IIKETWWLFDATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWL 722
            IIKETWWL DATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWL
Sbjct: 1410 IIKETWWLSDATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWL 1469

Query: 723  EGAHVIIKHLRPVTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQ 782
            EGAHVIIKHLRPVTSVAMLRIVFRI+GPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQ
Sbjct: 1470 EGAHVIIKHLRPVTSVAMLRIVFRIIGPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQ 1529

Query: 783  TSIPVEAAEISDLIDFLHHVVHYEGQGGPVVANSKPRQEVLAIIGRALENLRPDVQHLLS 842
            TSIPVEAAEI+DLIDFLHHVVHYEGQGGPVVA+SKPRQEVLAIIGRALENLRPDVQHLLS
Sbjct: 1530 TSIPVEAAEIADLIDFLHHVVHYEGQGGPVVASSKPRQEVLAIIGRALENLRPDVQHLLS 1589

Query: 843  HLKPDTSSSIYAATHPKLVQNPA 866
            HLKPDT+SSIYAATHPKLVQNPA
Sbjct: 1590 HLKPDTTSSIYAATHPKLVQNPA 1609

[Close]

BLAST of HG10009556 vs. ExPASy TrEMBL
Match: A0A1S4DS63 (mediator of RNA polymerase II transcription subunit 23 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504544 PE=3 SV=1)

HSP 1 Score: 1631.3 bits (4223), Expect = 0.0e+00
Identity = 832/863 (96.41%), Postives = 845/863 (97.91%), Query Frame = 0


Query: 3    FRSYSPLLQHLAQRNPSLLSKPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISAL 62
            FRS+     HLAQRNPSLLS+PGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISAL
Sbjct: 705  FRSH---FNHLAQRNPSLLSRPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISAL 764

Query: 63   KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG 122
            KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG
Sbjct: 765  KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG 824

Query: 123  IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLIGRIDKRGVAIQAWQQAET 182
            IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLIGRIDKRGVAIQAWQQAET
Sbjct: 825  IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLIGRIDKRGVAIQAWQQAET 884

Query: 183  TVINQCNQLLAPSADPAYVMTYISHSFPQHKQYLCAGAWIIMQGHPENINCTTLARVLRE 242
            TVINQCNQLL+PSADP YVMTYISHSFPQHKQYLCAGAWI+MQGHPE+INCTTLARVLRE
Sbjct: 885  TVINQCNQLLSPSADPTYVMTYISHSFPQHKQYLCAGAWILMQGHPESINCTTLARVLRE 944

Query: 243  FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA 302
            FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA
Sbjct: 945  FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA 1004

Query: 303  FIDRDDDPNALRIVTNLLDRQELHQRVKLYCISRGSPEHWLHSVVFKRNDLQKALGNHLS 362
            FIDRDDDPNALRIV +LLDRQEL QRVKLYCISRGSPEHWLHSVVFKRN+LQKALGNHLS
Sbjct: 1005 FIDRDDDPNALRIVISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRNELQKALGNHLS 1064

Query: 363  WKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLALYSPFLAYHPLRFTFVRDI 422
            WKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLA+YSPFLAYHPLRFTFVRDI
Sbjct: 1065 WKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDI 1124

Query: 423  LAYFYSHLSNKLIVRILYVLDISKIPFSESFPQHISSPGPVMCPPMDYFATLLLGLVNNV 482
            LAYFYSHL NKLIVRILYVLDISKIPFSESFPQHISS GPVMCPPMDYFATLLLGLVNNV
Sbjct: 1125 LAYFYSHLPNKLIVRILYVLDISKIPFSESFPQHISSAGPVMCPPMDYFATLLLGLVNNV 1184

Query: 483  IPSLQTSKSGTESDTSSNSMRPSHNKAPGTTPPGATSAPESQKAFYQIQDPGTYTQLVLE 542
            IPSLQTSKSGT  D SS+SMRPSHNKAPGT PP ATSAPESQKAFYQIQDPGTYTQLVLE
Sbjct: 1185 IPSLQTSKSGTAGDASSSSMRPSHNKAPGTNPPVATSAPESQKAFYQIQDPGTYTQLVLE 1244

Query: 543  TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLHGAPSSMGQGSALPTSPSGGST 602
            TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLH APSSMGQGSALPTSPSGGST
Sbjct: 1245 TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLHVAPSSMGQGSALPTSPSGGST 1304

Query: 603  DSLNAGRSNTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHVQLYLEASR 662
            DSLNAGRSNTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFH QLYLEASR
Sbjct: 1305 DSLNAGRSNTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHGQLYLEASR 1364

Query: 663  IIKETWWLFDATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWL 722
            IIKETWWL DATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWL
Sbjct: 1365 IIKETWWLSDATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWL 1424

Query: 723  EGAHVIIKHLRPVTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQ 782
            EGAHVIIKHLRPVTSVAMLRIVFRI+GPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQ
Sbjct: 1425 EGAHVIIKHLRPVTSVAMLRIVFRIIGPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQ 1484

Query: 783  TSIPVEAAEISDLIDFLHHVVHYEGQGGPVVANSKPRQEVLAIIGRALENLRPDVQHLLS 842
            TSIPVEAAEI+DLIDFLHHVVHYEGQGGPVVA+SKPRQEVLAIIGRALENLRPDVQHLLS
Sbjct: 1485 TSIPVEAAEIADLIDFLHHVVHYEGQGGPVVASSKPRQEVLAIIGRALENLRPDVQHLLS 1544

Query: 843  HLKPDTSSSIYAATHPKLVQNPA 866
            HLKPDT+SSIYAATHPKLVQNPA
Sbjct: 1545 HLKPDTTSSIYAATHPKLVQNPA 1564

[Close]

BLAST of HG10009556 vs. ExPASy TrEMBL
Match: A0A1S3CSR7 (mediator of RNA polymerase II transcription subunit 23 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504544 PE=3 SV=1)

HSP 1 Score: 1631.3 bits (4223), Expect = 0.0e+00
Identity = 832/863 (96.41%), Postives = 845/863 (97.91%), Query Frame = 0


Query: 3    FRSYSPLLQHLAQRNPSLLSKPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISAL 62
            FRS+     HLAQRNPSLLS+PGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISAL
Sbjct: 750  FRSH---FNHLAQRNPSLLSRPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISAL 809

Query: 63   KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG 122
            KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG
Sbjct: 810  KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG 869

Query: 123  IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLIGRIDKRGVAIQAWQQAET 182
            IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLIGRIDKRGVAIQAWQQAET
Sbjct: 870  IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLIGRIDKRGVAIQAWQQAET 929

Query: 183  TVINQCNQLLAPSADPAYVMTYISHSFPQHKQYLCAGAWIIMQGHPENINCTTLARVLRE 242
            TVINQCNQLL+PSADP YVMTYISHSFPQHKQYLCAGAWI+MQGHPE+INCTTLARVLRE
Sbjct: 930  TVINQCNQLLSPSADPTYVMTYISHSFPQHKQYLCAGAWILMQGHPESINCTTLARVLRE 989

Query: 243  FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA 302
            FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA
Sbjct: 990  FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA 1049

Query: 303  FIDRDDDPNALRIVTNLLDRQELHQRVKLYCISRGSPEHWLHSVVFKRNDLQKALGNHLS 362
            FIDRDDDPNALRIV +LLDRQEL QRVKLYCISRGSPEHWLHSVVFKRN+LQKALGNHLS
Sbjct: 1050 FIDRDDDPNALRIVISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRNELQKALGNHLS 1109

Query: 363  WKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLALYSPFLAYHPLRFTFVRDI 422
            WKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLA+YSPFLAYHPLRFTFVRDI
Sbjct: 1110 WKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDI 1169

Query: 423  LAYFYSHLSNKLIVRILYVLDISKIPFSESFPQHISSPGPVMCPPMDYFATLLLGLVNNV 482
            LAYFYSHL NKLIVRILYVLDISKIPFSESFPQHISS GPVMCPPMDYFATLLLGLVNNV
Sbjct: 1170 LAYFYSHLPNKLIVRILYVLDISKIPFSESFPQHISSAGPVMCPPMDYFATLLLGLVNNV 1229

Query: 483  IPSLQTSKSGTESDTSSNSMRPSHNKAPGTTPPGATSAPESQKAFYQIQDPGTYTQLVLE 542
            IPSLQTSKSGT  D SS+SMRPSHNKAPGT PP ATSAPESQKAFYQIQDPGTYTQLVLE
Sbjct: 1230 IPSLQTSKSGTAGDASSSSMRPSHNKAPGTNPPVATSAPESQKAFYQIQDPGTYTQLVLE 1289

Query: 543  TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLHGAPSSMGQGSALPTSPSGGST 602
            TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLH APSSMGQGSALPTSPSGGST
Sbjct: 1290 TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLHVAPSSMGQGSALPTSPSGGST 1349

Query: 603  DSLNAGRSNTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHVQLYLEASR 662
            DSLNAGRSNTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFH QLYLEASR
Sbjct: 1350 DSLNAGRSNTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHGQLYLEASR 1409

Query: 663  IIKETWWLFDATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWL 722
            IIKETWWL DATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWL
Sbjct: 1410 IIKETWWLSDATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWL 1469

Query: 723  EGAHVIIKHLRPVTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQ 782
            EGAHVIIKHLRPVTSVAMLRIVFRI+GPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQ
Sbjct: 1470 EGAHVIIKHLRPVTSVAMLRIVFRIIGPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQ 1529

Query: 783  TSIPVEAAEISDLIDFLHHVVHYEGQGGPVVANSKPRQEVLAIIGRALENLRPDVQHLLS 842
            TSIPVEAAEI+DLIDFLHHVVHYEGQGGPVVA+SKPRQEVLAIIGRALENLRPDVQHLLS
Sbjct: 1530 TSIPVEAAEIADLIDFLHHVVHYEGQGGPVVASSKPRQEVLAIIGRALENLRPDVQHLLS 1589

Query: 843  HLKPDTSSSIYAATHPKLVQNPA 866
            HLKPDT+SSIYAATHPKLVQNPA
Sbjct: 1590 HLKPDTTSSIYAATHPKLVQNPA 1609

[Close]

BLAST of HG10009556 vs. ExPASy TrEMBL
Match: A0A6J1FDL6 (mediator of RNA polymerase II transcription subunit 23 OS=Cucurbita moschata OX=3662 GN=LOC111444785 PE=3 SV=1)

HSP 1 Score: 1627.8 bits (4214), Expect = 0.0e+00
Identity = 827/863 (95.83%), Postives = 840/863 (97.33%), Query Frame = 0


Query: 3    FRSYSPLLQHLAQRNPSLLSKPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISAL 62
            FRS+     HLAQ+NPSLLSKPGVTLLVLEILNYRLLPLYRY+GKSKALMYDVTKIISAL
Sbjct: 751  FRSH---FNHLAQKNPSLLSKPGVTLLVLEILNYRLLPLYRYEGKSKALMYDVTKIISAL 810

Query: 63   KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG 122
            KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG
Sbjct: 811  KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG 870

Query: 123  IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLIGRIDKRGVAIQAWQQAET 182
            IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLRE LIGRIDKRGVAIQAWQQAET
Sbjct: 871  IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREALIGRIDKRGVAIQAWQQAET 930

Query: 183  TVINQCNQLLAPSADPAYVMTYISHSFPQHKQYLCAGAWIIMQGHPENINCTTLARVLRE 242
            TVINQCNQLL+PSADP YV+TYISHSFPQHKQYLCAGAWI+MQGHPENINCTTLARVLRE
Sbjct: 931  TVINQCNQLLSPSADPTYVITYISHSFPQHKQYLCAGAWILMQGHPENINCTTLARVLRE 990

Query: 243  FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA 302
            FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA
Sbjct: 991  FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA 1050

Query: 303  FIDRDDDPNALRIVTNLLDRQELHQRVKLYCISRGSPEHWLHSVVFKRNDLQKALGNHLS 362
            FIDRDDDPNALRIV +LLDRQEL QRVKLYCI+R SPEHWLHS  FKRNDLQKALGNHLS
Sbjct: 1051 FIDRDDDPNALRIVISLLDRQELQQRVKLYCINRVSPEHWLHSAAFKRNDLQKALGNHLS 1110

Query: 363  WKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLALYSPFLAYHPLRFTFVRDI 422
            WKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLA+YSPFLAYHPLRFTFVRDI
Sbjct: 1111 WKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDI 1170

Query: 423  LAYFYSHLSNKLIVRILYVLDISKIPFSESFPQHISSPGPVMCPPMDYFATLLLGLVNNV 482
            LAYFY HL NKLIVRILYVLDISKIPFSESFP +ISSPGPVMCPPMDYFATLLLG+VNNV
Sbjct: 1171 LAYFYGHLPNKLIVRILYVLDISKIPFSESFPHYISSPGPVMCPPMDYFATLLLGIVNNV 1230

Query: 483  IPSLQTSKSGTESDTSSNSMRPSHNKAPGTTPPGATSAPESQKAFYQIQDPGTYTQLVLE 542
            IPSLQTSK GT SDTSSNSMRPSHNKAPGTTPPGATSA ESQKAFYQIQDPGTYTQLVLE
Sbjct: 1231 IPSLQTSKPGTASDTSSNSMRPSHNKAPGTTPPGATSASESQKAFYQIQDPGTYTQLVLE 1290

Query: 543  TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLHGAPSSMGQGSALPTSPSGGST 602
            TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNN HGAPSSMGQGSALPTSPSGGST
Sbjct: 1291 TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNFHGAPSSMGQGSALPTSPSGGST 1350

Query: 603  DSLNAGRSNTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHVQLYLEASR 662
            DSLNAGRSNTS SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHVQLYLEASR
Sbjct: 1351 DSLNAGRSNTSASGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHVQLYLEASR 1410

Query: 663  IIKETWWLFDATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWL 722
            IIKETWWL DATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWL
Sbjct: 1411 IIKETWWLSDATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWL 1470

Query: 723  EGAHVIIKHLRPVTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQ 782
            EGAHVIIKHLRPVTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSV+VDVFGKN+Q
Sbjct: 1471 EGAHVIIKHLRPVTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSVLVDVFGKNTQ 1530

Query: 783  TSIPVEAAEISDLIDFLHHVVHYEGQGGPVVANSKPRQEVLAIIGRALENLRPDVQHLLS 842
            TSIPVEAAEISDLIDFLHHVVHYEGQGGPVVANSKPRQEVL IIGRALENLRPDVQHLLS
Sbjct: 1531 TSIPVEAAEISDLIDFLHHVVHYEGQGGPVVANSKPRQEVLGIIGRALENLRPDVQHLLS 1590

Query: 843  HLKPDTSSSIYAATHPKLVQNPA 866
            HLKPDTSSSIYAA HPKLVQNPA
Sbjct: 1591 HLKPDTSSSIYAAMHPKLVQNPA 1610

[Close]

BLAST of HG10009556 vs. ExPASy TrEMBL
Match: A0A0A0KPD2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G564790 PE=3 SV=1)

HSP 1 Score: 1625.5 bits (4208), Expect = 0.0e+00
Identity = 827/863 (95.83%), Postives = 844/863 (97.80%), Query Frame = 0


Query: 3   FRSYSPLLQHLAQRNPSLLSKPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISAL 62
           FRS+     HLAQRNPSLLS+PGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISAL
Sbjct: 108 FRSH---FNHLAQRNPSLLSRPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISAL 167

Query: 63  KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG 122
           KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG
Sbjct: 168 KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG 227

Query: 123 IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLIGRIDKRGVAIQAWQQAET 182
           IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLIGRIDKRGVAIQAWQQAET
Sbjct: 228 IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLIGRIDKRGVAIQAWQQAET 287

Query: 183 TVINQCNQLLAPSADPAYVMTYISHSFPQHKQYLCAGAWIIMQGHPENINCTTLARVLRE 242
           TVINQCNQLL+PSADP YVMTYISHSFPQHKQYLCAGAWI+MQGHPE+INCTTLARVLRE
Sbjct: 288 TVINQCNQLLSPSADPTYVMTYISHSFPQHKQYLCAGAWILMQGHPESINCTTLARVLRE 347

Query: 243 FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA 302
           FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA
Sbjct: 348 FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA 407

Query: 303 FIDRDDDPNALRIVTNLLDRQELHQRVKLYCISRGSPEHWLHSVVFKRNDLQKALGNHLS 362
           FIDRDDDPNALRIV +LLDRQEL QRVKLYCISRGSPEHWLHSVVFKRN+LQKALGNHLS
Sbjct: 408 FIDRDDDPNALRIVISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRNELQKALGNHLS 467

Query: 363 WKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLALYSPFLAYHPLRFTFVRDI 422
           WKDRYPVFFDDIAARLLP+IPLIVYRLIENDAVDQADR+LALYSPFLAYHPLRFTFVRDI
Sbjct: 468 WKDRYPVFFDDIAARLLPIIPLIVYRLIENDAVDQADRLLALYSPFLAYHPLRFTFVRDI 527

Query: 423 LAYFYSHLSNKLIVRILYVLDISKIPFSESFPQHISSPGPVMCPPMDYFATLLLGLVNNV 482
           LAYFYSHL NKLIVRILYVLDISKIPFSESFP HISSPGPVMCPPMDYFATLLLGLVNNV
Sbjct: 528 LAYFYSHLPNKLIVRILYVLDISKIPFSESFPTHISSPGPVMCPPMDYFATLLLGLVNNV 587

Query: 483 IPSLQTSKSGTESDTSSNSMRPSHNKAPGTTPPGATSAPESQKAFYQIQDPGTYTQLVLE 542
           IPSLQTSKSGT  D SS+SMRPSHNK+P T PP ATSAPESQKAFYQIQDPGTYTQLVLE
Sbjct: 588 IPSLQTSKSGTVGDNSSSSMRPSHNKSPATNPPVATSAPESQKAFYQIQDPGTYTQLVLE 647

Query: 543 TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLHGAPSSMGQGSALPTSPSGGST 602
           TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLH APSSMGQGSA+PTSPSGGST
Sbjct: 648 TAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLHVAPSSMGQGSAIPTSPSGGST 707

Query: 603 DSLNAGRSNTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHVQLYLEASR 662
           DSLNAGRSNTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFH QLYLEASR
Sbjct: 708 DSLNAGRSNTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHGQLYLEASR 767

Query: 663 IIKETWWLFDATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWL 722
           IIKETWWL DATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWL
Sbjct: 768 IIKETWWLSDATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWL 827

Query: 723 EGAHVIIKHLRPVTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQ 782
           EGAHVIIKHLRPVTSVAMLRIVFRI+GPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQ
Sbjct: 828 EGAHVIIKHLRPVTSVAMLRIVFRIIGPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQ 887

Query: 783 TSIPVEAAEISDLIDFLHHVVHYEGQGGPVVANSKPRQEVLAIIGRALENLRPDVQHLLS 842
           TSIPVEAAEI+DLIDFLHHVVHYEGQGGPVVA+SKPRQEVLAIIGRALENLRPDVQHLLS
Sbjct: 888 TSIPVEAAEIADLIDFLHHVVHYEGQGGPVVASSKPRQEVLAIIGRALENLRPDVQHLLS 947

Query: 843 HLKPDTSSSIYAATHPKLVQNPA 866
           HLKPDT++SIYAATHPKLVQNPA
Sbjct: 948 HLKPDTTTSIYAATHPKLVQNPA 967

[Close]

BLAST of HG10009556 vs. TAIR 10
Match: AT1G23230.1 (CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629); Has 187 Blast hits to 184 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). )

HSP 1 Score: 1275.0 bits (3298), Expect = 0.0e+00
Identity = 640/860 (74.42%), Postives = 736/860 (85.58%), Query Frame = 0


Query: 3    FRSYSPLLQHLAQRNPSLLSKPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISAL 62
            FRS+      LAQRN SLLSKPGVTLLVLEILNYRLLPLYRYQGKSK LMYDVTKIISAL
Sbjct: 749  FRSH---FSQLAQRNASLLSKPGVTLLVLEILNYRLLPLYRYQGKSKTLMYDVTKIISAL 808

Query: 63   KGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRG 122
            KGKRGDHR+FRLAENLCMNLI SLRDFF VKREGKGPTEFTETLNR+ ++TLAI IKTRG
Sbjct: 809  KGKRGDHRIFRLAENLCMNLILSLRDFFSVKREGKGPTEFTETLNRITIMTLAITIKTRG 868

Query: 123  IADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLIGRIDKRGVAIQAWQQAET 182
            IAD DH++YLQTMLEQ +ATSQHTWSEKT+R+FP +LRE L GR+DKRG++IQAWQQAET
Sbjct: 869  IADPDHMVYLQTMLEQILATSQHTWSEKTMRHFPSLLRETLKGRVDKRGLSIQAWQQAET 928

Query: 183  TVINQCNQLLAPSADPAYVMTYISHSFPQHKQYLCAGAWIIMQGHPENINCTTLARVLRE 242
            TVINQC QLL+PSA+PAYV TY+SHSFPQH+QYLCAGA ++MQGH ENIN T LARVLRE
Sbjct: 929  TVINQCTQLLSPSAEPAYVSTYLSHSFPQHRQYLCAGACLLMQGHAENINSTNLARVLRE 988

Query: 243  FSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLA 302
             SPEEVTANIYT+VDVLLHH+ ++ Q G S + +L K  ANL+FF WT E+LPLDI LLA
Sbjct: 989  VSPEEVTANIYTLVDVLLHHVHVDLQQGQSLEAVLDKAGANLAFFFWTHEMLPLDIFLLA 1048

Query: 303  FIDRDDDPNALRIVTNLLDRQELHQRVKLYCISRGSPEHWLHSVVFKRNDLQKALGNHLS 362
             IDRDDDP+AL I  +LL   +L  R+K YC +RGSPEHWL + VFKRN+LQKALGNHLS
Sbjct: 1049 LIDRDDDPHALIIAMSLLKTPDLLLRIKNYCQNRGSPEHWLVTQVFKRNELQKALGNHLS 1108

Query: 363  WKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLALYSPFLAYHPLRFTFVRDI 422
            WKDRYP FFDDIAARLLPVIPL++YRLIEN+A++QAD +L  +S FLAYHPLRFTFVRDI
Sbjct: 1109 WKDRYPTFFDDIAARLLPVIPLVLYRLIENNAMEQADNLLLAHSHFLAYHPLRFTFVRDI 1168

Query: 423  LAYFYSHLSNKLIVRILYVLDISKIPFSESFPQHISSPGPVMCPPMDYFATLLLGLVNNV 482
            LAYFY HL  KL++R+L VLD+SKIPFSESFPQ+IS  G  +CPP+DYFA+LLL LVNNV
Sbjct: 1169 LAYFYGHLPGKLVLRMLKVLDLSKIPFSESFPQYISPTGAPVCPPLDYFASLLLNLVNNV 1228

Query: 483  IPSLQ-----TSKSGTESDTSSNSMRPSHNKAPGTTPPGATSAPESQKAFYQIQDPGTYT 542
            IP L      +S+SG+ +D  ++S RP H K PGT+ PG  +A E QKAFYQIQDPGTYT
Sbjct: 1229 IPPLSSSSNCSSRSGSMADILNSSARPPHGKTPGTSQPGPANASEGQKAFYQIQDPGTYT 1288

Query: 543  QLVLETAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLHGAPSSMGQGSALPTSP 602
            QLVLETAVIE+LSLPVSA QIVSSLVQI+VNIQ TLIQS N  HGA + +GQGS LPTSP
Sbjct: 1289 QLVLETAVIEILSLPVSAAQIVSSLVQIIVNIQSTLIQSGNGFHGAANGVGQGSVLPTSP 1348

Query: 603  SGGSTDSLNAGRSNTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHVQLY 662
            SGGSTDS++A RS   + GINT +FVSRSGYTCQQLS L+IQACGLLLAQLP +FHVQLY
Sbjct: 1349 SGGSTDSMSASRSTCLIPGINTASFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHVQLY 1408

Query: 663  LEASRIIKETWWLFDATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNL 722
            LEA+R+ +ETWWL D  RS GEL+SAVGY+LMDPTWAAQDNTSTAIGN VALLH+ FSNL
Sbjct: 1409 LEAARVTRETWWLKDGKRSQGELDSAVGYALMDPTWAAQDNTSTAIGNIVALLHAFFSNL 1468

Query: 723  PQEWLEGAHVIIKHLRPVTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSVMVDVF 782
            PQEWL+G + II +LRPVTSVAMLR+VFRIMGPLLP+LA+ H+LF KTL  LLS +VDVF
Sbjct: 1469 PQEWLDGTNAIITNLRPVTSVAMLRVVFRIMGPLLPRLASTHTLFNKTLMLLLSALVDVF 1528

Query: 783  GKNSQTSIPVEAAEISDLIDFLHHVVHYEGQGGPVVANSKPRQEVLAIIGRALENLRPDV 842
            GK +QT+ PVEA++I+DLIDFLHH++HYEGQGG V  +SKPR ++LA+IGRA E LRPDV
Sbjct: 1529 GKTAQTTAPVEASQIADLIDFLHHIIHYEGQGGAVQTSSKPRPDILALIGRAAETLRPDV 1588

Query: 843  QHLLSHLKPDTSSSIYAATH 858
            QHLL+HLK + +SSIYAA H
Sbjct: 1589 QHLLAHLKTNPNSSIYAAAH 1605

[Close]

BLAST of HG10009556 vs. TAIR 10
Match: AT1G23230.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629). )

HSP 1 Score: 1268.8 bits (3282), Expect = 0.0e+00
Identity = 634/847 (74.85%), Postives = 729/847 (86.07%), Query Frame = 0


Query: 16   RNPSLLSKPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISALKGKRGDHRVFRLA 75
            RN SLLSKPGVTLLVLEILNYRLLPLYRYQGKSK LMYDVTKIISALKGKRGDHR+FRLA
Sbjct: 736  RNASLLSKPGVTLLVLEILNYRLLPLYRYQGKSKTLMYDVTKIISALKGKRGDHRIFRLA 795

Query: 76   ENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRGIADADHLLYLQTM 135
            ENLCMNLI SLRDFF VKREGKGPTEFTETLNR+ ++TLAI IKTRGIAD DH++YLQTM
Sbjct: 796  ENLCMNLILSLRDFFSVKREGKGPTEFTETLNRITIMTLAITIKTRGIADPDHMVYLQTM 855

Query: 136  LEQTMATSQHTWSEKTLRYFPPVLREVLIGRIDKRGVAIQAWQQAETTVINQCNQLLAPS 195
            LEQ +ATSQHTWSEKT+R+FP +LRE L GR+DKRG++IQAWQQAETTVINQC QLL+PS
Sbjct: 856  LEQILATSQHTWSEKTMRHFPSLLRETLKGRVDKRGLSIQAWQQAETTVINQCTQLLSPS 915

Query: 196  ADPAYVMTYISHSFPQHKQYLCAGAWIIMQGHPENINCTTLARVLREFSPEEVTANIYTM 255
            A+PAYV TY+SHSFPQH+QYLCAGA ++MQGH ENIN T LARVLRE SPEEVTANIYT+
Sbjct: 916  AEPAYVSTYLSHSFPQHRQYLCAGACLLMQGHAENINSTNLARVLREVSPEEVTANIYTL 975

Query: 256  VDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLAFIDRDDDPNALRI 315
            VDVLLHH+ ++ Q G S + +L K  ANL+FF WT E+LPLDI LLA IDRDDDP+AL I
Sbjct: 976  VDVLLHHVHVDLQQGQSLEAVLDKAGANLAFFFWTHEMLPLDIFLLALIDRDDDPHALII 1035

Query: 316  VTNLLDRQELHQRVKLYCISRGSPEHWLHSVVFKRNDLQKALGNHLSWKDRYPVFFDDIA 375
              +LL   +L  R+K YC +RGSPEHWL + VFKRN+LQKALGNHLSWKDRYP FFDDIA
Sbjct: 1036 AMSLLKTPDLLLRIKNYCQNRGSPEHWLVTQVFKRNELQKALGNHLSWKDRYPTFFDDIA 1095

Query: 376  ARLLPVIPLIVYRLIENDAVDQADRVLALYSPFLAYHPLRFTFVRDILAYFYSHLSNKLI 435
            ARLLPVIPL++YRLIEN+A++QAD +L  +S FLAYHPLRFTFVRDILAYFY HL  KL+
Sbjct: 1096 ARLLPVIPLVLYRLIENNAMEQADNLLLAHSHFLAYHPLRFTFVRDILAYFYGHLPGKLV 1155

Query: 436  VRILYVLDISKIPFSESFPQHISSPGPVMCPPMDYFATLLLGLVNNVIPSLQ-----TSK 495
            +R+L VLD+SKIPFSESFPQ+IS  G  +CPP+DYFA+LLL LVNNVIP L      +S+
Sbjct: 1156 LRMLKVLDLSKIPFSESFPQYISPTGAPVCPPLDYFASLLLNLVNNVIPPLSSSSNCSSR 1215

Query: 496  SGTESDTSSNSMRPSHNKAPGTTPPGATSAPESQKAFYQIQDPGTYTQLVLETAVIELLS 555
            SG+ +D  ++S RP H K PGT+ PG  +A E QKAFYQIQDPGTYTQLVLETAVIE+LS
Sbjct: 1216 SGSMADILNSSARPPHGKTPGTSQPGPANASEGQKAFYQIQDPGTYTQLVLETAVIEILS 1275

Query: 556  LPVSAGQIVSSLVQIVVNIQPTLIQSSNNLHGAPSSMGQGSALPTSPSGGSTDSLNAGRS 615
            LPVSA QIVSSLVQI+VNIQ TLIQS N  HGA + +GQGS LPTSPSGGSTDS++A RS
Sbjct: 1276 LPVSAAQIVSSLVQIIVNIQSTLIQSGNGFHGAANGVGQGSVLPTSPSGGSTDSMSASRS 1335

Query: 616  NTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHVQLYLEASRIIKETWWL 675
               + GINT +FVSRSGYTCQQLS L+IQACGLLLAQLP +FHVQLYLEA+R+ +ETWWL
Sbjct: 1336 TCLIPGINTASFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHVQLYLEAARVTRETWWL 1395

Query: 676  FDATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIK 735
             D  RS GEL+SAVGY+LMDPTWAAQDNTSTAIGN VALLH+ FSNLPQEWL+G + II 
Sbjct: 1396 KDGKRSQGELDSAVGYALMDPTWAAQDNTSTAIGNIVALLHAFFSNLPQEWLDGTNAIIT 1455

Query: 736  HLRPVTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQTSIPVEAA 795
            +LRPVTSVAMLR+VFRIMGPLLP+LA+ H+LF KTL  LLS +VDVFGK +QT+ PVEA+
Sbjct: 1456 NLRPVTSVAMLRVVFRIMGPLLPRLASTHTLFNKTLMLLLSALVDVFGKTAQTTAPVEAS 1515

Query: 796  EISDLIDFLHHVVHYEGQGGPVVANSKPRQEVLAIIGRALENLRPDVQHLLSHLKPDTSS 855
            +I+DLIDFLHH++HYEGQGG V  +SKPR ++LA+IGRA E LRPDVQHLL+HLK + +S
Sbjct: 1516 QIADLIDFLHHIIHYEGQGGAVQTSSKPRPDILALIGRAAETLRPDVQHLLAHLKTNPNS 1575

Query: 856  SIYAATH 858
            SIYAA H
Sbjct: 1576 SIYAAAH 1582

The following BLAST results are available for this feature:

BLAST of HG10009556 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023551559.1	0.0e+00	96.06	mediator of RNA polymerase II transcription subunit 23 [Cucurbita pepo subsp. pe...	[more]
XP_016898808.1	0.0e+00	96.41	PREDICTED: mediator of RNA polymerase II transcription subunit 23 isoform X2 [Cu...	[more]
XP_008467111.1	0.0e+00	96.41	PREDICTED: mediator of RNA polymerase II transcription subunit 23 isoform X1 [Cu...	[more]
KAG6579266.1	0.0e+00	95.94	Mediator of RNA polymerase II transcription subunit 23, partial [Cucurbita argyr...	[more]
KAG7016782.1	0.0e+00	95.83	Mediator of RNA polymerase II transcription subunit 23 [Cucurbita argyrosperma s...	[more]

BLAST of HG10009556 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4I4P3	0.0e+00	74.42	Mediator of RNA polymerase II transcription subunit 23 OS=Arabidopsis thaliana O...	[more]
Q16HH9	4.8e-11	21.12	Mediator of RNA polymerase II transcription subunit 23 OS=Aedes aegypti OX=7159 ...	[more]
Q9W1X7	1.0e-08	21.56	Mediator of RNA polymerase II transcription subunit 23 OS=Drosophila melanogaste...	[more]
Q55BN0	3.0e-05	19.21	Putative mediator of RNA polymerase II transcription subunit 23 OS=Dictyostelium...	[more]
Q60UZ5	8.8e-05	20.81	Mediator of RNA polymerase II transcription subunit 23 OS=Caenorhabditis briggsa...	[more]

BLAST of HG10009556 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TSF1	0.0e+00	96.41	Mediator of RNA polymerase II transcription subunit 23 isoform X1 OS=Cucumis mel...	[more]
A0A1S4DS63	0.0e+00	96.41	mediator of RNA polymerase II transcription subunit 23 isoform X2 OS=Cucumis mel...	[more]
A0A1S3CSR7	0.0e+00	96.41	mediator of RNA polymerase II transcription subunit 23 isoform X1 OS=Cucumis mel...	[more]
A0A6J1FDL6	0.0e+00	95.83	mediator of RNA polymerase II transcription subunit 23 OS=Cucurbita moschata OX=...	[more]
A0A0A0KPD2	0.0e+00	95.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G564790 PE=3 SV=1	[more]

BLAST of HG10009556 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23230.1	0.0e+00	74.42	CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629);...	[more]
AT1G23230.2	0.0e+00	74.85	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; ...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021629	Mediator complex, subunit Med23	PFAM	PF11573	Med23	coord: 102..438 e-value: 1.6E-24 score: 85.8
IPR021629	Mediator complex, subunit Med23	PANTHER	PTHR12691	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23	coord: 10..859
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 580..611
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 487..524
None	No IPR available	PANTHER	PTHR12691:SF11	BNAA09G30010D PROTEIN	coord: 10..859

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10009556.1	HG10009556.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010628	positive regulation of gene expression
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0016592	mediator complex
cellular_component	GO:0005667	transcription regulator complex