HG10009555 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10009555
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	mediator of RNA polymerase II transcription subunit 23
Location	Chr06: 7427201 .. 7430058 (+)
RNA-Seq Expression	HG10009555
Synteny	HG10009555

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGACAGATCAATTGGGATGTTTTGGGTTGTCTCATATACCATGGCACAACCAGCATGTGAAACTGTGATGAATTGGTTAACTTCTCCAGGAGTTCCAGAACTTTCCTCAGCACAAAATTTACAGACCAATGATAGGATAATGGTTATGCGAGAAGTGAGCCCATTACCGATGTCTTTGTTATCAGGTTTTTCAATGAACTTGTGCTCGAAGCTGGCATATCAAATGGAAGAATTTTTATTTTCTGGACAGGTATATATATTTTTCTTAGTCAAAATGGTCTACCTCACTCTACCTATGATCACAACTTTATAGGTGTGACCAGTAACCATTATGCAATAAAATCTTCCTAACATGGCATCGCGCAAAATGGCGTGTTGGACACATGCTGGAAGTGTGTTCGAGTGTCAGTGCTTGTCACGTGTTCTCTGGAGAGAGAAGAGGAGATCTCGTTTTTGTAAGGAGGATTTGAATAATTCAAATTAAAATATTATAAAGAAAGATCCTCTTTTTTAAATCAAAATTTATCCTCTGGGACTGTTGATTCAGCCATTGTAAGGGATGATTCATTATTCAAATTAGAAAGGATTGGAGGATTTGATATTGAGTCTGGTATCTGCACGAGCTGACTTGGGTTAGAAGATCCTTTTAACCCTAATGTTTCAAAGTTTGTTTACTCCTGCAGAAGATTCAATCTTAAAAGATGTGGGAGCCTGGTTTTGCGACCAACATTCTCCTCGTTCTAAGGAAATTAGTCACAAAGATCCGTTTAGCAAAGTTATCTCTCAAGATGGTGATATTCACAAACTAACGTTACTTAGAAATTATCAGGGTTAGAGAAACTTTCCTCTTTCATTGATAAATGTGGGCTTATTATTCATTCACGAAGTCCTTCCAAATTCTTCTCCTATCTTCTATATAATATATTATATATATATATATATATATATATATATATATATATTTTCCTGTGGGATTCTTCTGGTTGGGTATTTGCTGTCCTTTGAAGTTTTACCTCTTGAAGGAGGCCAAGCAATTCATAAAATATTTCTACCTCCCGAAGGAGGCCAAACAATACAATCCAATAACCAGCCTTGGTGGAACCAAAGGATTTCCTTGAAATTCTAAACTCATCCTGCTTTTAAAAAAGTCGAAAACATAGGGCAATGCAACCATTCCACCCAGGCGTTTTAAAGATAATAGCTAATAGAACAAACGATGCAAGTAGGAAAATGTACAACCAAAAGAACAATAACATTGTACAGAGCCCATAAACGAAAGATTCAAGAAGCCAAGCTCCATGAAACAACACGGATGAGAGGGATAGCCATAAATTCAAATCTGTCAGCCCCAGCCAAAAACGAAAGCTGCCAATTCAATCAGAGGAGAATCAAGTTGATATGGACTCTTCTCGAAGCACGTCTTTTGCTTTTTTTCATAAGTAATAGAGCTTTGAAGATTTCATAGTTCTCTCATTCCTCTTTTTTAATTCGAAGATAACTGAAAGATGGAAGTTTGCTTGAAATTGAAGAGTAATCAACTAGGGTTTCTTTGAAACGGTAAGGGACCCCATTTGTTCACTCCGAGTTGGATGAGGTAATGATTAGAAGTTACCGTTTTGTGGCGCTTGACCAGAGTGTTTGGAAATTTTGTAAGGAAAGCCTCCTTTGCTAGGAATCTATCAATGTGCGGGGAGAATCTCTGTAATCAGACCAAGTGAAAAGCCCTTTGGACAAAGGGATATCCACAAAAGCTTCTTGATCAATGAATTAATTAAACAGTCACATCTCTCAAGTAGGCCTTCTATAATTCAATTTTTCTTTAGTCCACCGAATGACATTGAAATCTCCTCCCAAAAGCCGTGCTCCAGAGCAAAGATGAGATAAGCCTTTGAGTTAACATCATGGGCCACTTGTTGTTTCTTATAGCATCATTTATTGAAGTTGATCCCACCAAACCAATGCTCCATTTTAAGCTTGAAGGCTACCTGCTTTACTTTCTTATCTTTGGGTATACTACATACTCAAAAAACTTACAACATATTTTTATCCAATTCAGGAATGTTTCCACATCCAAATTTTGGAAATATATTCACCCTGAGCCTTTTCTTGCATGAAAATTATTATCCACTTTTGGGGTTACTGCTAAACCAAATCTTCTCCTTTTTTGGATGTGCTTCTCCATTTATCCACTTTTGGTTTTGGGGTCTTATACTATTTTTTGTTTTGGCCGATGTGTTATGGCTTCATGCTCTCTCTCTCTCTCTCCATCTTCTGTTTCATCATGGGTTGCCTTCTTCCTTTCTATCCTGGCGTCATTGTCTCTATCTTTTAGCTTCTCTTCATGTAACTATTTAGATATTTCATTCATCAATAAAAATTTTTTTATCCAAAAAAAAGAATTATTATTATTATTATTATTTGACCATCAACCCTAAACTAACCACACGAACTTCAAGACACTTGAAAGTAGAAAGACTAAACTGGAATGATGTTTTACTTGTTAAGTTGTCTTTTGTTTACTTTTCTCTCTCCTCTATAGAGTTCTGTATCTAGTGAGCACTAGTCTCTCTTTTCATTTCATCAATGAAAAGTTTTGTCTATTGTTTAAAAAAAATGTGTCTAAATGGAATGAGAGCCAAAGCATAGAGACTCAAATGATATTTTTCTACATAGCAATAAAAAAAAAGACTAAATGGAATGTGAGCCAAAATATAGTTTTGTACATACATATATATAATTGATTTTCAGGGCATCAAGAGGGTCCTGGGTTTCGGTTCGGCTGAAGAAAAGGAAAAGGAAGGATGGATGAAAGAGGAAGAAAAAGTAAAAGAGAGAGAGTATTTAAAATTTTAA

mRNA sequence

ATGGATGACAGATCAATTGGGATGTTTTGGGTTGTCTCATATACCATGGCACAACCAGCATGTGAAACTGTGATGAATTGGTTAACTTCTCCAGGAGTTCCAGAACTTTCCTCAGCACAAAATTTACAGACCAATGATAGGATAATGGTTATGCGAGAAGTGAGCCCATTACCGATGTCTTTGTTATCAGGTTTTTCAATGAACTTGTGCTCGAAGCTGGCATATCAAATGGAAGAATTTTTATTTTCTGGACAGGGCATCAAGAGGGTCCTGGGTTTCGGTTCGGCTGAAGAAAAGGAAAAGGAAGGATGGATGAAAGAGGAAGAAAAAGTAAAAGAGAGAGAGTATTTAAAATTTTAA

Coding sequence (CDS)

ATGGATGACAGATCAATTGGGATGTTTTGGGTTGTCTCATATACCATGGCACAACCAGCATGTGAAACTGTGATGAATTGGTTAACTTCTCCAGGAGTTCCAGAACTTTCCTCAGCACAAAATTTACAGACCAATGATAGGATAATGGTTATGCGAGAAGTGAGCCCATTACCGATGTCTTTGTTATCAGGTTTTTCAATGAACTTGTGCTCGAAGCTGGCATATCAAATGGAAGAATTTTTATTTTCTGGACAGGGCATCAAGAGGGTCCTGGGTTTCGGTTCGGCTGAAGAAAAGGAAAAGGAAGGATGGATGAAAGAGGAAGAAAAAGTAAAAGAGAGAGAGTATTTAAAATTTTAA

Protein sequence

MDDRSIGMFWVVSYTMAQPACETVMNWLTSPGVPELSSAQNLQTNDRIMVMREVSPLPMSLLSGFSMNLCSKLAYQMEEFLFSGQGIKRVLGFGSAEEKEKEGWMKEEEKVKEREYLKF

Homology

[Close]

BLAST of HG10009555 vs. NCBI nr
Match: XP_038875594.1 (mediator of RNA polymerase II transcription subunit 23 [Benincasa hispida])

HSP 1 Score: 167.9 bits (424), Expect = 5.2e-38
Identity = 82/90 (91.11%), Postives = 85/90 (94.44%), Query Frame = 0


Query: 1   MDDRSIGMFWVVSYTMAQPACETVMNWLTSPGVPELSSAQNLQTNDRIMVMREVSPLPMS 60
           MDDRSIGMFWVVSYTMAQPACETVMNWLTS GVPELSSAQNLQTN+RIMVMREVSPLPMS
Sbjct: 643 MDDRSIGMFWVVSYTMAQPACETVMNWLTSAGVPELSSAQNLQTNERIMVMREVSPLPMS 702

Query: 61  LLSGFSMNLCSKLAYQMEEFLFSGQGIKRV 91
           LLSGFSMNLCSKLAYQMEE LFSGQ +  +
Sbjct: 703 LLSGFSMNLCSKLAYQMEESLFSGQAVPSI 732

[Close]

BLAST of HG10009555 vs. NCBI nr
Match: XP_011655454.1 (mediator of RNA polymerase II transcription subunit 23 [Cucumis sativus] >KAE8648601.1 hypothetical protein Csa_009222 [Cucumis sativus])

HSP 1 Score: 166.4 bits (420), Expect = 1.5e-37
Identity = 81/90 (90.00%), Postives = 84/90 (93.33%), Query Frame = 0


Query: 1   MDDRSIGMFWVVSYTMAQPACETVMNWLTSPGVPELSSAQNLQTNDRIMVMREVSPLPMS 60
           MDDRSIGMFWVVSYTMAQPACETVMNWLTS G PELSSAQNLQTN+RIMVMREVSPLPMS
Sbjct: 643 MDDRSIGMFWVVSYTMAQPACETVMNWLTSAGAPELSSAQNLQTNERIMVMREVSPLPMS 702

Query: 61  LLSGFSMNLCSKLAYQMEEFLFSGQGIKRV 91
           LLSGFSMNLCSKLAYQMEE LFSGQ +  +
Sbjct: 703 LLSGFSMNLCSKLAYQMEESLFSGQAVPSI 732

[Close]

BLAST of HG10009555 vs. NCBI nr
Match: XP_016898808.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 23 isoform X2 [Cucumis melo])

HSP 1 Score: 165.2 bits (417), Expect = 3.4e-37
Identity = 80/90 (88.89%), Postives = 84/90 (93.33%), Query Frame = 0


Query: 1   MDDRSIGMFWVVSYTMAQPACETVMNWLTSPGVPELSSAQNLQTNDRIMVMREVSPLPMS 60
           MDD+SIGMFWVVSYTMAQPACETVMNWLTS G PELSSAQNLQTN+RIMVMREVSPLPMS
Sbjct: 598 MDDKSIGMFWVVSYTMAQPACETVMNWLTSAGAPELSSAQNLQTNERIMVMREVSPLPMS 657

Query: 61  LLSGFSMNLCSKLAYQMEEFLFSGQGIKRV 91
           LLSGFSMNLCSKLAYQMEE LFSGQ +  +
Sbjct: 658 LLSGFSMNLCSKLAYQMEESLFSGQAVPSI 687

[Close]

BLAST of HG10009555 vs. NCBI nr
Match: XP_008467111.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 23 isoform X1 [Cucumis melo] >KAA0046342.1 mediator of RNA polymerase II transcription subunit 23 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 165.2 bits (417), Expect = 3.4e-37
Identity = 80/90 (88.89%), Postives = 84/90 (93.33%), Query Frame = 0


Query: 1   MDDRSIGMFWVVSYTMAQPACETVMNWLTSPGVPELSSAQNLQTNDRIMVMREVSPLPMS 60
           MDD+SIGMFWVVSYTMAQPACETVMNWLTS G PELSSAQNLQTN+RIMVMREVSPLPMS
Sbjct: 643 MDDKSIGMFWVVSYTMAQPACETVMNWLTSAGAPELSSAQNLQTNERIMVMREVSPLPMS 702

Query: 61  LLSGFSMNLCSKLAYQMEEFLFSGQGIKRV 91
           LLSGFSMNLCSKLAYQMEE LFSGQ +  +
Sbjct: 703 LLSGFSMNLCSKLAYQMEESLFSGQAVPSI 732

[Close]

BLAST of HG10009555 vs. NCBI nr
Match: XP_022973546.1 (mediator of RNA polymerase II transcription subunit 23 [Cucurbita maxima])

HSP 1 Score: 164.5 bits (415), Expect = 5.7e-37
Identity = 79/90 (87.78%), Postives = 84/90 (93.33%), Query Frame = 0


Query: 1   MDDRSIGMFWVVSYTMAQPACETVMNWLTSPGVPELSSAQNLQTNDRIMVMREVSPLPMS 60
           MDDRSIGMFWVVSYTMAQPACETVMNWL+S GVPELSSAQNLQTN+RIM+MREVSPLPMS
Sbjct: 644 MDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMIMREVSPLPMS 703

Query: 61  LLSGFSMNLCSKLAYQMEEFLFSGQGIKRV 91
           LLSGFSMNLCSKL YQMEE LFSGQ +  +
Sbjct: 704 LLSGFSMNLCSKLTYQMEESLFSGQAVPSI 733

[Close]

BLAST of HG10009555 vs. ExPASy Swiss-Prot
Match: F4I4P3 (Mediator of RNA polymerase II transcription subunit 23 OS=Arabidopsis thaliana OX=3702 GN=MED23 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.0e-28
Identity = 64/90 (71.11%), Postives = 73/90 (81.11%), Query Frame = 0


Query: 1   MDDRSIGMFWVVSYTMAQPACETVMNWLTSPGVPELSSAQNLQTNDRIMVMREVSPLPMS 60
           MDDRSIGMFWVVSYTMAQPACETV+NWL+S G+ EL     LQ NDR+M+ +EV+PLPMS
Sbjct: 645 MDDRSIGMFWVVSYTMAQPACETVINWLSSAGMAEL---PGLQPNDRVMMTQEVTPLPMS 704

Query: 61  LLSGFSMNLCSKLAYQMEEFLFSGQGIKRV 91
           LLSGFSMNLC KLA QMEE LF  Q +  +
Sbjct: 705 LLSGFSMNLCLKLALQMEEALFVSQVVPSI 731

[Close]

BLAST of HG10009555 vs. ExPASy TrEMBL
Match: A0A0A0KPD2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G564790 PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 7.3e-38
Identity = 81/90 (90.00%), Postives = 84/90 (93.33%), Query Frame = 0


Query: 1  MDDRSIGMFWVVSYTMAQPACETVMNWLTSPGVPELSSAQNLQTNDRIMVMREVSPLPMS 60
          MDDRSIGMFWVVSYTMAQPACETVMNWLTS G PELSSAQNLQTN+RIMVMREVSPLPMS
Sbjct: 1  MDDRSIGMFWVVSYTMAQPACETVMNWLTSAGAPELSSAQNLQTNERIMVMREVSPLPMS 60

Query: 61 LLSGFSMNLCSKLAYQMEEFLFSGQGIKRV 91
          LLSGFSMNLCSKLAYQMEE LFSGQ +  +
Sbjct: 61 LLSGFSMNLCSKLAYQMEESLFSGQAVPSI 90

[Close]

BLAST of HG10009555 vs. ExPASy TrEMBL
Match: A0A5A7TSF1 (Mediator of RNA polymerase II transcription subunit 23 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G00510 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.6e-37
Identity = 80/90 (88.89%), Postives = 84/90 (93.33%), Query Frame = 0


Query: 1   MDDRSIGMFWVVSYTMAQPACETVMNWLTSPGVPELSSAQNLQTNDRIMVMREVSPLPMS 60
           MDD+SIGMFWVVSYTMAQPACETVMNWLTS G PELSSAQNLQTN+RIMVMREVSPLPMS
Sbjct: 643 MDDKSIGMFWVVSYTMAQPACETVMNWLTSAGAPELSSAQNLQTNERIMVMREVSPLPMS 702

Query: 61  LLSGFSMNLCSKLAYQMEEFLFSGQGIKRV 91
           LLSGFSMNLCSKLAYQMEE LFSGQ +  +
Sbjct: 703 LLSGFSMNLCSKLAYQMEESLFSGQAVPSI 732

[Close]

BLAST of HG10009555 vs. ExPASy TrEMBL
Match: A0A1S4DS63 (mediator of RNA polymerase II transcription subunit 23 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504544 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.6e-37
Identity = 80/90 (88.89%), Postives = 84/90 (93.33%), Query Frame = 0


Query: 1   MDDRSIGMFWVVSYTMAQPACETVMNWLTSPGVPELSSAQNLQTNDRIMVMREVSPLPMS 60
           MDD+SIGMFWVVSYTMAQPACETVMNWLTS G PELSSAQNLQTN+RIMVMREVSPLPMS
Sbjct: 598 MDDKSIGMFWVVSYTMAQPACETVMNWLTSAGAPELSSAQNLQTNERIMVMREVSPLPMS 657

Query: 61  LLSGFSMNLCSKLAYQMEEFLFSGQGIKRV 91
           LLSGFSMNLCSKLAYQMEE LFSGQ +  +
Sbjct: 658 LLSGFSMNLCSKLAYQMEESLFSGQAVPSI 687

[Close]

BLAST of HG10009555 vs. ExPASy TrEMBL
Match: A0A1S3CSR7 (mediator of RNA polymerase II transcription subunit 23 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504544 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.6e-37
Identity = 80/90 (88.89%), Postives = 84/90 (93.33%), Query Frame = 0


Query: 1   MDDRSIGMFWVVSYTMAQPACETVMNWLTSPGVPELSSAQNLQTNDRIMVMREVSPLPMS 60
           MDD+SIGMFWVVSYTMAQPACETVMNWLTS G PELSSAQNLQTN+RIMVMREVSPLPMS
Sbjct: 643 MDDKSIGMFWVVSYTMAQPACETVMNWLTSAGAPELSSAQNLQTNERIMVMREVSPLPMS 702

Query: 61  LLSGFSMNLCSKLAYQMEEFLFSGQGIKRV 91
           LLSGFSMNLCSKLAYQMEE LFSGQ +  +
Sbjct: 703 LLSGFSMNLCSKLAYQMEESLFSGQAVPSI 732

[Close]

BLAST of HG10009555 vs. ExPASy TrEMBL
Match: A0A6J1I8Y2 (mediator of RNA polymerase II transcription subunit 23 OS=Cucurbita maxima OX=3661 GN=LOC111472080 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.8e-37
Identity = 79/90 (87.78%), Postives = 84/90 (93.33%), Query Frame = 0


Query: 1   MDDRSIGMFWVVSYTMAQPACETVMNWLTSPGVPELSSAQNLQTNDRIMVMREVSPLPMS 60
           MDDRSIGMFWVVSYTMAQPACETVMNWL+S GVPELSSAQNLQTN+RIM+MREVSPLPMS
Sbjct: 644 MDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMIMREVSPLPMS 703

Query: 61  LLSGFSMNLCSKLAYQMEEFLFSGQGIKRV 91
           LLSGFSMNLCSKL YQMEE LFSGQ +  +
Sbjct: 704 LLSGFSMNLCSKLTYQMEESLFSGQAVPSI 733

[Close]

BLAST of HG10009555 vs. TAIR 10
Match: AT1G23230.1 (CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629); Has 187 Blast hits to 184 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). )

HSP 1 Score: 127.5 bits (319), Expect = 7.2e-30
Identity = 64/90 (71.11%), Postives = 73/90 (81.11%), Query Frame = 0


Query: 1   MDDRSIGMFWVVSYTMAQPACETVMNWLTSPGVPELSSAQNLQTNDRIMVMREVSPLPMS 60
           MDDRSIGMFWVVSYTMAQPACETV+NWL+S G+ EL     LQ NDR+M+ +EV+PLPMS
Sbjct: 645 MDDRSIGMFWVVSYTMAQPACETVINWLSSAGMAEL---PGLQPNDRVMMTQEVTPLPMS 704

Query: 61  LLSGFSMNLCSKLAYQMEEFLFSGQGIKRV 91
           LLSGFSMNLC KLA QMEE LF  Q +  +
Sbjct: 705 LLSGFSMNLCLKLALQMEEALFVSQVVPSI 731

[Close]

BLAST of HG10009555 vs. TAIR 10
Match: AT1G23230.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629). )

HSP 1 Score: 127.5 bits (319), Expect = 7.2e-30
Identity = 64/90 (71.11%), Postives = 73/90 (81.11%), Query Frame = 0


Query: 1   MDDRSIGMFWVVSYTMAQPACETVMNWLTSPGVPELSSAQNLQTNDRIMVMREVSPLPMS 60
           MDDRSIGMFWVVSYTMAQPACETV+NWL+S G+ EL     LQ NDR+M+ +EV+PLPMS
Sbjct: 626 MDDRSIGMFWVVSYTMAQPACETVINWLSSAGMAEL---PGLQPNDRVMMTQEVTPLPMS 685

Query: 61  LLSGFSMNLCSKLAYQMEEFLFSGQGIKRV 91
           LLSGFSMNLC KLA QMEE LF  Q +  +
Sbjct: 686 LLSGFSMNLCLKLALQMEEALFVSQVVPSI 712

The following BLAST results are available for this feature:

BLAST of HG10009555 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875594.1	5.2e-38	91.11	mediator of RNA polymerase II transcription subunit 23 [Benincasa hispida]	[more]
XP_011655454.1	1.5e-37	90.00	mediator of RNA polymerase II transcription subunit 23 [Cucumis sativus] >KAE864...	[more]
XP_016898808.1	3.4e-37	88.89	PREDICTED: mediator of RNA polymerase II transcription subunit 23 isoform X2 [Cu...	[more]
XP_008467111.1	3.4e-37	88.89	PREDICTED: mediator of RNA polymerase II transcription subunit 23 isoform X1 [Cu...	[more]
XP_022973546.1	5.7e-37	87.78	mediator of RNA polymerase II transcription subunit 23 [Cucurbita maxima]	[more]

BLAST of HG10009555 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4I4P3	1.0e-28	71.11	Mediator of RNA polymerase II transcription subunit 23 OS=Arabidopsis thaliana O...	[more]

BLAST of HG10009555 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPD2	7.3e-38	90.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G564790 PE=3 SV=1	[more]
A0A5A7TSF1	1.6e-37	88.89	Mediator of RNA polymerase II transcription subunit 23 isoform X1 OS=Cucumis mel...	[more]
A0A1S4DS63	1.6e-37	88.89	mediator of RNA polymerase II transcription subunit 23 isoform X2 OS=Cucumis mel...	[more]
A0A1S3CSR7	1.6e-37	88.89	mediator of RNA polymerase II transcription subunit 23 isoform X1 OS=Cucumis mel...	[more]
A0A6J1I8Y2	2.8e-37	87.78	mediator of RNA polymerase II transcription subunit 23 OS=Cucurbita maxima OX=36...	[more]

BLAST of HG10009555 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23230.1	7.2e-30	71.11	CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629);...	[more]
AT1G23230.2	7.2e-30	71.11	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; ...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR12691:SF11	BNAA09G30010D PROTEIN	coord: 1..86
IPR021629	Mediator complex, subunit Med23	PANTHER	PTHR12691	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23	coord: 1..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10009555.1	HG10009555.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010628	positive regulation of gene expression
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0016592	mediator complex
cellular_component	GO:0005667	transcription regulator complex