HG10009540 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10009540
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	C2 domain-containing protein
Location	Chr06: 7209270 .. 7211150 (+)
RNA-Seq Expression	HG10009540
Synteny	HG10009540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACACTTTTTGGGTCTTCTCCGAATTCGGGTGTTGCACGGTGTTAATCTCGCTATTCGTGATTCCCGTAGCAGCGATCCTTATGTCGTCGTCACAATGGGCGAGCAGGTCTCTGGATTTTCATTTCTTACTAGAATTTTCCTGTTTTTTATGAGATTGAAGTGTGCTTTATGCTTAAGTTTCTTGAATCAGTGCATATTAATTTAGCTCGTTTTAGGTTTATTCATTATTCAGTTGTTCTCTGTTCCCTTCTTCCCCCGTGCGATCGTCCATCTCCTTGACCTAGATTGTTTGCTTTTAAATTCAGACTAACAGAAGAGGCTTGAATAGTTTTGAAAAGAAAGGATTAGAATAACTGATTTGATCGATATCACTTTGAAAAATGGTATTAAATATCATTTCGATTTTGAGTTTGTCGATGACCTTTCATGGGCCTAGCTGTTCTGAGCTTAAGAAGAGGGGGATCATCTGTGCATTATCTTTTTGTGGCAGTTGGAGGTTTTCTTGTTATTTTTGTAAACAATTTTTCTGATTTTTAGTTGGGTATGTTGCTGATTTGATATTTGTCTAAAATGGAGGCTTTTTTTGTATTTATTCGTTATTTTTCGATTTTGGGGATCTCTATACGATTGTAGGAAGTTCGTATCTTTGAATACTTATTTAACTTTTTAACTCTTGATGAAAAGTATGCTTCTGGTTTTGGAAAAAATGCGTTTTGTGAATGCTTGATAATTTATAATAACAGGAAACATTGGAAGAAGCAGAAAATCAAGACAACGGGAATTGTGTAGCCTAACTTATTTTCATTTTTTTGCTTTTCTTGAATCAAATGACTTTGGTCTTTGCTTGATTATTCTTTGTGCCATCATTTTTCTTTTTCTTTTTTGCCAAGGATAACAGGTAAATCTATGGTAAGATCGGTTGATCCAACTTACTCTTGGTCTACTTTTATGAGGTATTTGATTCGTGTGAGGGTTGGGACATTAAGCCTAAATTCAAAACATTGGATTGTTTTATCGTAGAGCTCGACGATTTGCTAATCCGATGAAATGATAATGTTACCAAGTCTTGAGATTCATCTCTCAGGATTATTACTCGAGAGAAATTTATAAACCAAACATACGACACACAGAATTAAGTTTCTAATGTTCATCTCTAAACACATAATTCTAGGTTTCCTAATTAACTATGAAAACTCAAGCTTTCTAAATAATGAACCAAAGCCCACCTTACTGATACTCTTGAGCCTTCTATTTTGAATCTTGAATGATTTTTTTTTCTTATTCTTCTGACATAACTCAAATTGGTGCAGAGGTTGAAGACCCGGGTGGTGAAAAATAATTGCAATCCTGAATGGAATGATGAGTTGACTCTTTCAGTTGCAGATCTCAGGACTCCAATCGGTTTAGTAAGTAATATTTCTCTTCAATTATTAGGAATAAGAGCTTCAAGCCAACCACCTGAAGAGGAAAGGAGATATATTCTATGTACAATGAAGAAAATGAGCATAATGAGCATGTGTAACTTACTGCTTTATGTGCTCTTGTTTTTCCCTTTTTGTAGTCAGTGTATGACAAAGACACACTAACAGACCATGACAAAATGGGAGATGCCGAGATCGACATTGAACCGTACATCGAGTGTTTGAAGATGGGACTGGAGAGCCTCCCAGATGGGTGTGTGGTTAAGAGAGTATATCCAAAAAGAACAAACAATTTAGCTGATGAGAGCCAATGTGTTTGGCAGAAGGGGAAAATTGTACAGAACATGTTCCTGAGGTTGAAGAATGTAGAGTGTGGTGAGGTGGCAATTCAGCTCGAATGGATCGACGTTCCTGGTGCTAAGGGTCTGCCGATTGGGGGTACGAGCCACTTCTGA

mRNA sequence

ATGGAACACTTTTTGGGTCTTCTCCGAATTCGGGTGTTGCACGGTGTTAATCTCGCTATTCGTGATTCCCGTAGCAGCGATCCTTATGTCGTCGTCACAATGGGCGAGCAGAGGTTGAAGACCCGGGTGGTGAAAAATAATTGCAATCCTGAATGGAATGATGAGTTGACTCTTTCAGTTGCAGATCTCAGGACTCCAATCGGTTTATCAGTGTATGACAAAGACACACTAACAGACCATGACAAAATGGGAGATGCCGAGATCGACATTGAACCGTACATCGAGTGTTTGAAGATGGGACTGGAGAGCCTCCCAGATGGGTGTGTGGTTAAGAGAGTATATCCAAAAAGAACAAACAATTTAGCTGATGAGAGCCAATGTGTTTGGCAGAAGGGGAAAATTGTACAGAACATGTTCCTGAGGTTGAAGAATGTAGAGTGTGGTGAGGTGGCAATTCAGCTCGAATGGATCGACGTTCCTGGTGCTAAGGGTCTGCCGATTGGGGGTACGAGCCACTTCTGA

Coding sequence (CDS)

ATGGAACACTTTTTGGGTCTTCTCCGAATTCGGGTGTTGCACGGTGTTAATCTCGCTATTCGTGATTCCCGTAGCAGCGATCCTTATGTCGTCGTCACAATGGGCGAGCAGAGGTTGAAGACCCGGGTGGTGAAAAATAATTGCAATCCTGAATGGAATGATGAGTTGACTCTTTCAGTTGCAGATCTCAGGACTCCAATCGGTTTATCAGTGTATGACAAAGACACACTAACAGACCATGACAAAATGGGAGATGCCGAGATCGACATTGAACCGTACATCGAGTGTTTGAAGATGGGACTGGAGAGCCTCCCAGATGGGTGTGTGGTTAAGAGAGTATATCCAAAAAGAACAAACAATTTAGCTGATGAGAGCCAATGTGTTTGGCAGAAGGGGAAAATTGTACAGAACATGTTCCTGAGGTTGAAGAATGTAGAGTGTGGTGAGGTGGCAATTCAGCTCGAATGGATCGACGTTCCTGGTGCTAAGGGTCTGCCGATTGGGGGTACGAGCCACTTCTGA

Protein sequence

MEHFLGLLRIRVLHGVNLAIRDSRSSDPYVVVTMGEQRLKTRVVKNNCNPEWNDELTLSVADLRTPIGLSVYDKDTLTDHDKMGDAEIDIEPYIECLKMGLESLPDGCVVKRVYPKRTNNLADESQCVWQKGKIVQNMFLRLKNVECGEVAIQLEWIDVPGAKGLPIGGTSHF

Homology

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BLAST of HG10009540 vs. NCBI nr
Match: XP_038876274.1 (protein C2-DOMAIN ABA-RELATED 7-like [Benincasa hispida] >XP_038876275.1 protein C2-DOMAIN ABA-RELATED 7-like [Benincasa hispida] >XP_038876276.1 protein C2-DOMAIN ABA-RELATED 7-like [Benincasa hispida])

HSP 1 Score: 346.3 bits (887), Expect = 1.5e-91
Identity = 161/173 (93.06%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MEHFLGLLRIRVLHGVNLAIRDSRSSDPYVVVTMGEQRLKTRVVKNNCNPEWNDELTLSV 60
           MEHFLGLLRIRVL G+NLA+RDSRSSDPYVVV+MG+QRLKTRVVKNNCNPEWNDELTLS+
Sbjct: 1   MEHFLGLLRIRVLRGINLAVRDSRSSDPYVVVSMGDQRLKTRVVKNNCNPEWNDELTLSI 60

Query: 61  ADLRTPIGLSVYDKDTLTDHDKMGDAEIDIEPYIECLKMGLESLPDGCVVKRVYPKRTNN 120
           ADLRT IGLSV+DKDTLTDHDKMGDAEIDIEPYIECLKMGLESLPDGCVVKRVYP RTNN
Sbjct: 61  ADLRTRIGLSVFDKDTLTDHDKMGDAEIDIEPYIECLKMGLESLPDGCVVKRVYPSRTNN 120

Query: 121 LADESQCVWQKGKIVQNMFLRLKNVECGEVAIQLEWIDVPGAKGLPIGGTSHF 174
           LADESQCVW KGKIVQNMFLRLKNVECGEVAIQLEWIDVPGAKGLP+GGTSH+
Sbjct: 121 LADESQCVWHKGKIVQNMFLRLKNVECGEVAIQLEWIDVPGAKGLPVGGTSHY 173

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BLAST of HG10009540 vs. NCBI nr
Match: XP_008467129.1 (PREDICTED: protein C2-DOMAIN ABA-RELATED 7-like [Cucumis melo] >TYK30490.1 protein C2-DOMAIN ABA-RELATED 7-like [Cucumis melo var. makuwa])

HSP 1 Score: 332.0 bits (850), Expect = 3.0e-87
Identity = 156/173 (90.17%), Postives = 163/173 (94.22%), Query Frame = 0


Query: 1   MEHFLGLLRIRVLHGVNLAIRDSRSSDPYVVVTMGEQRLKTRVVKNNCNPEWNDELTLSV 60
           MEHFLGLLRIRVL GVNLAIRD+RSSDPYVVVTMG Q+LKTRVVKNNCNPEWNDELTLSV
Sbjct: 1   MEHFLGLLRIRVLRGVNLAIRDTRSSDPYVVVTMGNQKLKTRVVKNNCNPEWNDELTLSV 60

Query: 61  ADLRTPIGLSVYDKDTLTDHDKMGDAEIDIEPYIECLKMGLESLPDGCVVKRVYPKRTNN 120
           ADLRTPIG+SVYDKDTLTDHDKMGDAEIDIEPYIECLKMGL+SLPDGCVV+R+YP  TN 
Sbjct: 61  ADLRTPIGISVYDKDTLTDHDKMGDAEIDIEPYIECLKMGLQSLPDGCVVRRLYPSGTNY 120

Query: 121 LADESQCVWQKGKIVQNMFLRLKNVECGEVAIQLEWIDVPGAKGLPIGGTSHF 174
           LADESQCVW  GKIVQNM LRLKNVECGEVAIQLEWIDVPGAKGLP+G TS F
Sbjct: 121 LADESQCVWHNGKIVQNMILRLKNVECGEVAIQLEWIDVPGAKGLPVGSTSDF 173

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BLAST of HG10009540 vs. NCBI nr
Match: XP_004150594.1 (protein C2-DOMAIN ABA-RELATED 7 [Cucumis sativus] >KGN51489.1 hypothetical protein Csa_008843 [Cucumis sativus])

HSP 1 Score: 330.5 bits (846), Expect = 8.8e-87
Identity = 155/173 (89.60%), Postives = 165/173 (95.38%), Query Frame = 0


Query: 1   MEHFLGLLRIRVLHGVNLAIRDSRSSDPYVVVTMGEQRLKTRVVKNNCNPEWNDELTLSV 60
           MEHFLGLLRIRVL GVNLAIRD+RSSDPYV+VTMG+QRLKTRVVKNNCNPEWNDELTLSV
Sbjct: 1   MEHFLGLLRIRVLRGVNLAIRDTRSSDPYVLVTMGDQRLKTRVVKNNCNPEWNDELTLSV 60

Query: 61  ADLRTPIGLSVYDKDTLTDHDKMGDAEIDIEPYIECLKMGLESLPDGCVVKRVYPKRTNN 120
           ADLRTPIGLSVYDKDTLTDHDKMGDAEIDI PYIECL+MGL+SLPDGCVV+R+YP RTN 
Sbjct: 61  ADLRTPIGLSVYDKDTLTDHDKMGDAEIDIGPYIECLRMGLQSLPDGCVVRRLYPSRTNC 120

Query: 121 LADESQCVWQKGKIVQNMFLRLKNVECGEVAIQLEWIDVPGAKGLPIGGTSHF 174
           LADESQCVWQKGKIVQNM LRLKN ECGEVA+QLEWI+VPGAKGLP G TS+F
Sbjct: 121 LADESQCVWQKGKIVQNMILRLKNAECGEVAVQLEWINVPGAKGLPDGSTSNF 173

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BLAST of HG10009540 vs. NCBI nr
Match: KAA0046327.1 (protein C2-DOMAIN ABA-RELATED 7-like [Cucumis melo var. makuwa])

HSP 1 Score: 328.2 bits (840), Expect = 4.4e-86
Identity = 156/174 (89.66%), Postives = 164/174 (94.25%), Query Frame = 0


Query: 1   MEHFLGLLRIRVLHGVNLAIRDSRSSDPYVVVTMG-EQRLKTRVVKNNCNPEWNDELTLS 60
           MEHFLGLLRIRVL GVNLAIRD+RSSDPYVVVTMG +Q+LKTRVVKNNCNPEWNDELTLS
Sbjct: 1   MEHFLGLLRIRVLRGVNLAIRDTRSSDPYVVVTMGNQQKLKTRVVKNNCNPEWNDELTLS 60

Query: 61  VADLRTPIGLSVYDKDTLTDHDKMGDAEIDIEPYIECLKMGLESLPDGCVVKRVYPKRTN 120
           VADLRTPIG+SVYDKDTLTDHDKMGDAEIDIEPYIECLKMGL+SLPDGCVV+R+YP  TN
Sbjct: 61  VADLRTPIGISVYDKDTLTDHDKMGDAEIDIEPYIECLKMGLQSLPDGCVVRRLYPSGTN 120

Query: 121 NLADESQCVWQKGKIVQNMFLRLKNVECGEVAIQLEWIDVPGAKGLPIGGTSHF 174
            LADESQCVW  GKIVQNM LRLKNVECGEVAIQLEWIDVPGAKGLP+G TS F
Sbjct: 121 YLADESQCVWHNGKIVQNMILRLKNVECGEVAIQLEWIDVPGAKGLPVGSTSDF 174

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BLAST of HG10009540 vs. NCBI nr
Match: XP_022921810.1 (protein C2-DOMAIN ABA-RELATED 7-like [Cucurbita moschata] >XP_022921817.1 protein C2-DOMAIN ABA-RELATED 7-like [Cucurbita moschata] >KAG7032576.1 Protein C2-DOMAIN ABA-RELATED 7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 323.9 bits (829), Expect = 8.2e-85
Identity = 151/173 (87.28%), Postives = 161/173 (93.06%), Query Frame = 0


Query: 1   MEHFLGLLRIRVLHGVNLAIRDSRSSDPYVVVTMGEQRLKTRVVKNNCNPEWNDELTLSV 60
           MEHFLGLLRIRVL G NLA+RD+RSSDP+VVVTMG+  LKTRVVKNNCNPEWNDELTLS+
Sbjct: 1   MEHFLGLLRIRVLRGSNLAVRDTRSSDPFVVVTMGDTSLKTRVVKNNCNPEWNDELTLSI 60

Query: 61  ADLRTPIGLSVYDKDTLTDHDKMGDAEIDIEPYIECLKMGLESLPDGCVVKRVYPKRTNN 120
           ADLRTPIGLSVYDKDT+TDHDKMGDA IDIEPYIECLKMGLESLP+GCVVKRVYP RTN+
Sbjct: 61  ADLRTPIGLSVYDKDTVTDHDKMGDAAIDIEPYIECLKMGLESLPEGCVVKRVYPSRTND 120

Query: 121 LADESQCVWQKGKIVQNMFLRLKNVECGEVAIQLEWIDVPGAKGLPIGGTSHF 174
           LADESQCVW KGKI+QNM LRLKNVECGEV IQLEWIDVPG+KGLP  G SHF
Sbjct: 121 LADESQCVWNKGKIIQNMHLRLKNVECGEVEIQLEWIDVPGSKGLPKEGMSHF 173

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BLAST of HG10009540 vs. ExPASy Swiss-Prot
Match: Q9SSL1 (Protein C2-DOMAIN ABA-RELATED 7 OS=Arabidopsis thaliana OX=3702 GN=CAR7 PE=1 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 2.5e-60
Identity = 109/165 (66.06%), Postives = 131/165 (79.39%), Query Frame = 0


Query: 1   MEHFLGLLRIRVLHGVNLAIRDSRSSDPYVVVTMGEQRLKTRVVKNNCNPEWNDELTLSV 60
           ME  +GLLRIRV  G+NLA RD+ SSDP+VV+TMG Q+LKTRVV+NNCNPEWN+ELTL++
Sbjct: 1   MEELVGLLRIRVKRGINLAQRDTLSSDPFVVITMGSQKLKTRVVENNCNPEWNEELTLAL 60

Query: 61  ADLRTPIGLSVYDKDTLTDHDKMGDAEIDIEPYIECLKMGLESLPDGCVVKRVYPKRTNN 120
                P+ L VYDKDT T HDKMGDA+IDI+P++E  KMGL+ LPDG  +KRV P R N 
Sbjct: 61  RHPDEPVNLIVYDKDTFTSHDKMGDAKIDIKPFLEVHKMGLQELPDGTEIKRVVPNRENC 120

Query: 121 LADESQCVWQKGKIVQNMFLRLKNVECGEVAIQLEWIDVPGAKGL 166
           LA+ S  V   GKIVQNM L L+NVECGEV IQLEWID+PG++GL
Sbjct: 121 LAEASSIVSNNGKIVQNMILLLRNVECGEVEIQLEWIDIPGSRGL 165

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BLAST of HG10009540 vs. ExPASy Swiss-Prot
Match: Q9S7J9 (Protein C2-DOMAIN ABA-RELATED 9 OS=Arabidopsis thaliana OX=3702 GN=CAR9 PE=2 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 5.4e-55
Identity = 97/163 (59.51%), Postives = 123/163 (75.46%), Query Frame = 0


Query: 5   LGLLRIRVLHGVNLAIRDSRSSDPYVVVTMGEQRLKTRVVKNNCNPEWNDELTLSVADLR 64
           LG+LR+ V  G+NLAIRD+ +SDPYVV+T+  Q+LKTRV+ NNCNP WN++LTLS+ D+ 
Sbjct: 6   LGILRVHVKRGINLAIRDATTSDPYVVITLANQKLKTRVINNNCNPVWNEQLTLSIKDVN 65

Query: 65  TPIGLSVYDKDTLTDHDKMGDAEIDIEPYIECLKMGL--ESLPDGCVVKRVYPKRTNNLA 124
            PI L+V+DKD  +  DKMGDAEID  P++E  +M L  + LP+GC +KR+ P RTN LA
Sbjct: 66  DPIRLTVFDKDRFSGDDKMGDAEIDFRPFLEAHQMELDFQKLPNGCAIKRIRPGRTNCLA 125

Query: 125 DESQCVWQKGKIVQNMFLRLKNVECGEVAIQLEWIDVPGAKGL 166
           +ES   W  GKI+Q M LRLKNVECGEV + LEW D PG KGL
Sbjct: 126 EESSITWSNGKIMQEMILRLKNVECGEVELMLEWTDGPGCKGL 168

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BLAST of HG10009540 vs. ExPASy Swiss-Prot
Match: Q9LVH4 (Protein C2-DOMAIN ABA-RELATED 4 OS=Arabidopsis thaliana OX=3702 GN=CAR4 PE=1 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.0e-53
Identity = 98/165 (59.39%), Postives = 125/165 (75.76%), Query Frame = 0


Query: 1   MEHFLGLLRIRVLHGVNLAIRDSRSSDPYVVVTMGEQRLKTRVVKNNCNPEWNDELTLSV 60
           M+  LGLLRIR+  GVNLA+RD  SSDPYVVV MG+Q+LKTRV+  + NPEWN++LTLSV
Sbjct: 13  MDDLLGLLRIRIKRGVNLAVRDISSSDPYVVVKMGKQKLKTRVINKDVNPEWNEDLTLSV 72

Query: 61  ADLRTPIGLSVYDKDTLTDHDKMGDAEIDIEPYIECLKMGLESLPDGCVVKRVYPKRTNN 120
            D    + L+VYD D  +  DKMGDAE +I+PYIE L+M L+ LP G +V  V P R N 
Sbjct: 73  TDSNLTVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGTIVTTVKPSRRNC 132

Query: 121 LADESQCVWQKGKIVQNMFLRLKNVECGEVAIQLEWIDVPGAKGL 166
           LA+ES+  W  GK+VQ++ LRL++VECGEV  QL+WID+PG+KGL
Sbjct: 133 LAEESRVTWVDGKLVQDLVLRLRHVECGEVEAQLQWIDLPGSKGL 177

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BLAST of HG10009540 vs. ExPASy Swiss-Prot
Match: Q9ZVF1 (Protein C2-DOMAIN ABA-RELATED 10 OS=Arabidopsis thaliana OX=3702 GN=CAR10 PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 6.6e-53
Identity = 96/163 (58.90%), Postives = 120/163 (73.62%), Query Frame = 0


Query: 5   LGLLRIRVLHGVNLAIRDSRSSDPYVVVTMGEQRLKTRVVKNNCNPEWNDELTLSVADLR 64
           LGLL I V  G+NLAIRD RSSDPY+V+ + +Q LKTRVVK NCNP WN+E+T+++ D  
Sbjct: 6   LGLLTIHVKRGINLAIRDHRSSDPYIVLNVADQTLKTRVVKKNCNPVWNEEMTVAIKDPN 65

Query: 65  TPIGLSVYDKDTLTDHDKMGDAEIDIEPYIECLKMGLE--SLPDGCVVKRVYPKRTNNLA 124
            PI L+V+D D  T  DKMGDA IDI+PY+E LKMG+E   LP+GC +KRV P R N L+
Sbjct: 66  VPIRLTVFDWDKFTGDDKMGDANIDIQPYLEALKMGMELLRLPNGCAIKRVQPSRHNCLS 125

Query: 125 DESQCVWQKGKIVQNMFLRLKNVECGEVAIQLEWIDVPGAKGL 166
           DES  VW  GKI Q++ LRL NVECGE+ I LEW +  G +G+
Sbjct: 126 DESSIVWNNGKITQDLILRLNNVECGEIEIMLEWHEGAGCRGI 168

[Close]

BLAST of HG10009540 vs. ExPASy Swiss-Prot
Match: Q9FHP6 (Protein C2-DOMAIN ABA-RELATED 1 OS=Arabidopsis thaliana OX=3702 GN=CAR1 PE=1 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.1e-52
Identity = 100/168 (59.52%), Postives = 128/168 (76.19%), Query Frame = 0


Query: 1   MEHFLGLLRIRVLHGVNLAIRDSRSSDPYVVVTMGEQRLKTRVVKNNCNPEWNDELTLSV 60
           ME+ +GLLRI V  GVNLAIRD  SSDPY+VV  G+Q+LKTRVVK++ NPEWND+LTLSV
Sbjct: 1   MENLVGLLRIHVKRGVNLAIRDISSSDPYIVVHCGKQKLKTRVVKHSVNPEWNDDLTLSV 60

Query: 61  ADLRTPIGLSVYDKDTLTDHDKMGDAEIDIEPYIECLKMGLE---SLPDGCVVKRVYPKR 120
            D   PI L+VYD D L+  DKMG+AE  I P+IE +K   +    LP+G ++K++ P R
Sbjct: 61  TDPNLPIKLTVYDYDLLSADDKMGEAEFHIGPFIEAIKFAHQLGPGLPNGTIIKKIEPSR 120

Query: 121 TNNLADESQCVWQKGKIVQNMFLRLKNVECGEVAIQLEWIDVPGAKGL 166
            N L++ S  V  +GKIVQNMFLRL++VECGEV +QLEWIDVPG++G+
Sbjct: 121 KNCLSESSHIVLNQGKIVQNMFLRLQHVECGEVELQLEWIDVPGSRGI 168

[Close]

BLAST of HG10009540 vs. ExPASy TrEMBL
Match: A0A5D3E4K2 (Protein C2-DOMAIN ABA-RELATED 7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00330 PE=3 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.5e-87
Identity = 156/173 (90.17%), Postives = 163/173 (94.22%), Query Frame = 0


Query: 1   MEHFLGLLRIRVLHGVNLAIRDSRSSDPYVVVTMGEQRLKTRVVKNNCNPEWNDELTLSV 60
           MEHFLGLLRIRVL GVNLAIRD+RSSDPYVVVTMG Q+LKTRVVKNNCNPEWNDELTLSV
Sbjct: 1   MEHFLGLLRIRVLRGVNLAIRDTRSSDPYVVVTMGNQKLKTRVVKNNCNPEWNDELTLSV 60

Query: 61  ADLRTPIGLSVYDKDTLTDHDKMGDAEIDIEPYIECLKMGLESLPDGCVVKRVYPKRTNN 120
           ADLRTPIG+SVYDKDTLTDHDKMGDAEIDIEPYIECLKMGL+SLPDGCVV+R+YP  TN 
Sbjct: 61  ADLRTPIGISVYDKDTLTDHDKMGDAEIDIEPYIECLKMGLQSLPDGCVVRRLYPSGTNY 120

Query: 121 LADESQCVWQKGKIVQNMFLRLKNVECGEVAIQLEWIDVPGAKGLPIGGTSHF 174
           LADESQCVW  GKIVQNM LRLKNVECGEVAIQLEWIDVPGAKGLP+G TS F
Sbjct: 121 LADESQCVWHNGKIVQNMILRLKNVECGEVAIQLEWIDVPGAKGLPVGSTSDF 173

[Close]

BLAST of HG10009540 vs. ExPASy TrEMBL
Match: A0A1S3CST2 (protein C2-DOMAIN ABA-RELATED 7-like OS=Cucumis melo OX=3656 GN=LOC103504557 PE=3 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.5e-87
Identity = 156/173 (90.17%), Postives = 163/173 (94.22%), Query Frame = 0


Query: 1   MEHFLGLLRIRVLHGVNLAIRDSRSSDPYVVVTMGEQRLKTRVVKNNCNPEWNDELTLSV 60
           MEHFLGLLRIRVL GVNLAIRD+RSSDPYVVVTMG Q+LKTRVVKNNCNPEWNDELTLSV
Sbjct: 1   MEHFLGLLRIRVLRGVNLAIRDTRSSDPYVVVTMGNQKLKTRVVKNNCNPEWNDELTLSV 60

Query: 61  ADLRTPIGLSVYDKDTLTDHDKMGDAEIDIEPYIECLKMGLESLPDGCVVKRVYPKRTNN 120
           ADLRTPIG+SVYDKDTLTDHDKMGDAEIDIEPYIECLKMGL+SLPDGCVV+R+YP  TN 
Sbjct: 61  ADLRTPIGISVYDKDTLTDHDKMGDAEIDIEPYIECLKMGLQSLPDGCVVRRLYPSGTNY 120

Query: 121 LADESQCVWQKGKIVQNMFLRLKNVECGEVAIQLEWIDVPGAKGLPIGGTSHF 174
           LADESQCVW  GKIVQNM LRLKNVECGEVAIQLEWIDVPGAKGLP+G TS F
Sbjct: 121 LADESQCVWHNGKIVQNMILRLKNVECGEVAIQLEWIDVPGAKGLPVGSTSDF 173

[Close]

BLAST of HG10009540 vs. ExPASy TrEMBL
Match: A0A0A0KRJ0 (C2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G569360 PE=3 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 4.2e-87
Identity = 155/173 (89.60%), Postives = 165/173 (95.38%), Query Frame = 0


Query: 1   MEHFLGLLRIRVLHGVNLAIRDSRSSDPYVVVTMGEQRLKTRVVKNNCNPEWNDELTLSV 60
           MEHFLGLLRIRVL GVNLAIRD+RSSDPYV+VTMG+QRLKTRVVKNNCNPEWNDELTLSV
Sbjct: 1   MEHFLGLLRIRVLRGVNLAIRDTRSSDPYVLVTMGDQRLKTRVVKNNCNPEWNDELTLSV 60

Query: 61  ADLRTPIGLSVYDKDTLTDHDKMGDAEIDIEPYIECLKMGLESLPDGCVVKRVYPKRTNN 120
           ADLRTPIGLSVYDKDTLTDHDKMGDAEIDI PYIECL+MGL+SLPDGCVV+R+YP RTN 
Sbjct: 61  ADLRTPIGLSVYDKDTLTDHDKMGDAEIDIGPYIECLRMGLQSLPDGCVVRRLYPSRTNC 120

Query: 121 LADESQCVWQKGKIVQNMFLRLKNVECGEVAIQLEWIDVPGAKGLPIGGTSHF 174
           LADESQCVWQKGKIVQNM LRLKN ECGEVA+QLEWI+VPGAKGLP G TS+F
Sbjct: 121 LADESQCVWQKGKIVQNMILRLKNAECGEVAVQLEWINVPGAKGLPDGSTSNF 173

[Close]

BLAST of HG10009540 vs. ExPASy TrEMBL
Match: A0A5A7TWP8 (Protein C2-DOMAIN ABA-RELATED 7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G00360 PE=3 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 2.1e-86
Identity = 156/174 (89.66%), Postives = 164/174 (94.25%), Query Frame = 0


Query: 1   MEHFLGLLRIRVLHGVNLAIRDSRSSDPYVVVTMG-EQRLKTRVVKNNCNPEWNDELTLS 60
           MEHFLGLLRIRVL GVNLAIRD+RSSDPYVVVTMG +Q+LKTRVVKNNCNPEWNDELTLS
Sbjct: 1   MEHFLGLLRIRVLRGVNLAIRDTRSSDPYVVVTMGNQQKLKTRVVKNNCNPEWNDELTLS 60

Query: 61  VADLRTPIGLSVYDKDTLTDHDKMGDAEIDIEPYIECLKMGLESLPDGCVVKRVYPKRTN 120
           VADLRTPIG+SVYDKDTLTDHDKMGDAEIDIEPYIECLKMGL+SLPDGCVV+R+YP  TN
Sbjct: 61  VADLRTPIGISVYDKDTLTDHDKMGDAEIDIEPYIECLKMGLQSLPDGCVVRRLYPSGTN 120

Query: 121 NLADESQCVWQKGKIVQNMFLRLKNVECGEVAIQLEWIDVPGAKGLPIGGTSHF 174
            LADESQCVW  GKIVQNM LRLKNVECGEVAIQLEWIDVPGAKGLP+G TS F
Sbjct: 121 YLADESQCVWHNGKIVQNMILRLKNVECGEVAIQLEWIDVPGAKGLPVGSTSDF 174

[Close]

BLAST of HG10009540 vs. ExPASy TrEMBL
Match: A0A6J1E6U7 (protein C2-DOMAIN ABA-RELATED 7-like OS=Cucurbita moschata OX=3662 GN=LOC111429951 PE=3 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 4.0e-85
Identity = 151/173 (87.28%), Postives = 161/173 (93.06%), Query Frame = 0


Query: 1   MEHFLGLLRIRVLHGVNLAIRDSRSSDPYVVVTMGEQRLKTRVVKNNCNPEWNDELTLSV 60
           MEHFLGLLRIRVL G NLA+RD+RSSDP+VVVTMG+  LKTRVVKNNCNPEWNDELTLS+
Sbjct: 1   MEHFLGLLRIRVLRGSNLAVRDTRSSDPFVVVTMGDTSLKTRVVKNNCNPEWNDELTLSI 60

Query: 61  ADLRTPIGLSVYDKDTLTDHDKMGDAEIDIEPYIECLKMGLESLPDGCVVKRVYPKRTNN 120
           ADLRTPIGLSVYDKDT+TDHDKMGDA IDIEPYIECLKMGLESLP+GCVVKRVYP RTN+
Sbjct: 61  ADLRTPIGLSVYDKDTVTDHDKMGDAAIDIEPYIECLKMGLESLPEGCVVKRVYPSRTND 120

Query: 121 LADESQCVWQKGKIVQNMFLRLKNVECGEVAIQLEWIDVPGAKGLPIGGTSHF 174
           LADESQCVW KGKI+QNM LRLKNVECGEV IQLEWIDVPG+KGLP  G SHF
Sbjct: 121 LADESQCVWNKGKIIQNMHLRLKNVECGEVEIQLEWIDVPGSKGLPKEGMSHF 173

[Close]

BLAST of HG10009540 vs. TAIR 10
Match: AT1G70810.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 233.0 bits (593), Expect = 1.8e-61
Identity = 109/165 (66.06%), Postives = 131/165 (79.39%), Query Frame = 0


Query: 1   MEHFLGLLRIRVLHGVNLAIRDSRSSDPYVVVTMGEQRLKTRVVKNNCNPEWNDELTLSV 60
           ME  +GLLRIRV  G+NLA RD+ SSDP+VV+TMG Q+LKTRVV+NNCNPEWN+ELTL++
Sbjct: 1   MEELVGLLRIRVKRGINLAQRDTLSSDPFVVITMGSQKLKTRVVENNCNPEWNEELTLAL 60

Query: 61  ADLRTPIGLSVYDKDTLTDHDKMGDAEIDIEPYIECLKMGLESLPDGCVVKRVYPKRTNN 120
                P+ L VYDKDT T HDKMGDA+IDI+P++E  KMGL+ LPDG  +KRV P R N 
Sbjct: 61  RHPDEPVNLIVYDKDTFTSHDKMGDAKIDIKPFLEVHKMGLQELPDGTEIKRVVPNRENC 120

Query: 121 LADESQCVWQKGKIVQNMFLRLKNVECGEVAIQLEWIDVPGAKGL 166
           LA+ S  V   GKIVQNM L L+NVECGEV IQLEWID+PG++GL
Sbjct: 121 LAEASSIVSNNGKIVQNMILLLRNVECGEVEIQLEWIDIPGSRGL 165

[Close]

BLAST of HG10009540 vs. TAIR 10
Match: AT1G70790.2 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 215.3 bits (547), Expect = 3.8e-56
Identity = 97/163 (59.51%), Postives = 123/163 (75.46%), Query Frame = 0


Query: 5   LGLLRIRVLHGVNLAIRDSRSSDPYVVVTMGEQRLKTRVVKNNCNPEWNDELTLSVADLR 64
           LG+LR+ V  G+NLAIRD+ +SDPYVV+T+  Q+LKTRV+ NNCNP WN++LTLS+ D+ 
Sbjct: 6   LGILRVHVKRGINLAIRDATTSDPYVVITLANQKLKTRVINNNCNPVWNEQLTLSIKDVN 65

Query: 65  TPIGLSVYDKDTLTDHDKMGDAEIDIEPYIECLKMGL--ESLPDGCVVKRVYPKRTNNLA 124
            PI L+V+DKD  +  DKMGDAEID  P++E  +M L  + LP+GC +KR+ P RTN LA
Sbjct: 66  DPIRLTVFDKDRFSGDDKMGDAEIDFRPFLEAHQMELDFQKLPNGCAIKRIRPGRTNCLA 125

Query: 125 DESQCVWQKGKIVQNMFLRLKNVECGEVAIQLEWIDVPGAKGL 166
           +ES   W  GKI+Q M LRLKNVECGEV + LEW D PG KGL
Sbjct: 126 EESSITWSNGKIMQEMILRLKNVECGEVELMLEWTDGPGCKGL 168

[Close]

BLAST of HG10009540 vs. TAIR 10
Match: AT1G70790.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 215.3 bits (547), Expect = 3.8e-56
Identity = 97/163 (59.51%), Postives = 123/163 (75.46%), Query Frame = 0


Query: 5   LGLLRIRVLHGVNLAIRDSRSSDPYVVVTMGEQRLKTRVVKNNCNPEWNDELTLSVADLR 64
           LG+LR+ V  G+NLAIRD+ +SDPYVV+T+  Q+LKTRV+ NNCNP WN++LTLS+ D+ 
Sbjct: 6   LGILRVHVKRGINLAIRDATTSDPYVVITLANQKLKTRVINNNCNPVWNEQLTLSIKDVN 65

Query: 65  TPIGLSVYDKDTLTDHDKMGDAEIDIEPYIECLKMGL--ESLPDGCVVKRVYPKRTNNLA 124
            PI L+V+DKD  +  DKMGDAEID  P++E  +M L  + LP+GC +KR+ P RTN LA
Sbjct: 66  DPIRLTVFDKDRFSGDDKMGDAEIDFRPFLEAHQMELDFQKLPNGCAIKRIRPGRTNCLA 125

Query: 125 DESQCVWQKGKIVQNMFLRLKNVECGEVAIQLEWIDVPGAKGL 166
           +ES   W  GKI+Q M LRLKNVECGEV + LEW D PG KGL
Sbjct: 126 EESSITWSNGKIMQEMILRLKNVECGEVELMLEWTDGPGCKGL 168

[Close]

BLAST of HG10009540 vs. TAIR 10
Match: AT3G17980.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 211.1 bits (536), Expect = 7.2e-55
Identity = 98/165 (59.39%), Postives = 125/165 (75.76%), Query Frame = 0


Query: 1   MEHFLGLLRIRVLHGVNLAIRDSRSSDPYVVVTMGEQRLKTRVVKNNCNPEWNDELTLSV 60
           M+  LGLLRIR+  GVNLA+RD  SSDPYVVV MG+Q+LKTRV+  + NPEWN++LTLSV
Sbjct: 13  MDDLLGLLRIRIKRGVNLAVRDISSSDPYVVVKMGKQKLKTRVINKDVNPEWNEDLTLSV 72

Query: 61  ADLRTPIGLSVYDKDTLTDHDKMGDAEIDIEPYIECLKMGLESLPDGCVVKRVYPKRTNN 120
            D    + L+VYD D  +  DKMGDAE +I+PYIE L+M L+ LP G +V  V P R N 
Sbjct: 73  TDSNLTVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGTIVTTVKPSRRNC 132

Query: 121 LADESQCVWQKGKIVQNMFLRLKNVECGEVAIQLEWIDVPGAKGL 166
           LA+ES+  W  GK+VQ++ LRL++VECGEV  QL+WID+PG+KGL
Sbjct: 133 LAEESRVTWVDGKLVQDLVLRLRHVECGEVEAQLQWIDLPGSKGL 177

[Close]

BLAST of HG10009540 vs. TAIR 10
Match: AT2G01540.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 208.4 bits (529), Expect = 4.7e-54
Identity = 96/163 (58.90%), Postives = 120/163 (73.62%), Query Frame = 0


Query: 5   LGLLRIRVLHGVNLAIRDSRSSDPYVVVTMGEQRLKTRVVKNNCNPEWNDELTLSVADLR 64
           LGLL I V  G+NLAIRD RSSDPY+V+ + +Q LKTRVVK NCNP WN+E+T+++ D  
Sbjct: 6   LGLLTIHVKRGINLAIRDHRSSDPYIVLNVADQTLKTRVVKKNCNPVWNEEMTVAIKDPN 65

Query: 65  TPIGLSVYDKDTLTDHDKMGDAEIDIEPYIECLKMGLE--SLPDGCVVKRVYPKRTNNLA 124
            PI L+V+D D  T  DKMGDA IDI+PY+E LKMG+E   LP+GC +KRV P R N L+
Sbjct: 66  VPIRLTVFDWDKFTGDDKMGDANIDIQPYLEALKMGMELLRLPNGCAIKRVQPSRHNCLS 125

Query: 125 DESQCVWQKGKIVQNMFLRLKNVECGEVAIQLEWIDVPGAKGL 166
           DES  VW  GKI Q++ LRL NVECGE+ I LEW +  G +G+
Sbjct: 126 DESSIVWNNGKITQDLILRLNNVECGEIEIMLEWHEGAGCRGI 168

The following BLAST results are available for this feature:

BLAST of HG10009540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876274.1	1.5e-91	93.06	protein C2-DOMAIN ABA-RELATED 7-like [Benincasa hispida] >XP_038876275.1 protein...	[more]
XP_008467129.1	3.0e-87	90.17	PREDICTED: protein C2-DOMAIN ABA-RELATED 7-like [Cucumis melo] >TYK30490.1 prote...	[more]
XP_004150594.1	8.8e-87	89.60	protein C2-DOMAIN ABA-RELATED 7 [Cucumis sativus] >KGN51489.1 hypothetical prote...	[more]
KAA0046327.1	4.4e-86	89.66	protein C2-DOMAIN ABA-RELATED 7-like [Cucumis melo var. makuwa]	[more]
XP_022921810.1	8.2e-85	87.28	protein C2-DOMAIN ABA-RELATED 7-like [Cucurbita moschata] >XP_022921817.1 protei...	[more]

BLAST of HG10009540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SSL1	2.5e-60	66.06	Protein C2-DOMAIN ABA-RELATED 7 OS=Arabidopsis thaliana OX=3702 GN=CAR7 PE=1 SV=...	[more]
Q9S7J9	5.4e-55	59.51	Protein C2-DOMAIN ABA-RELATED 9 OS=Arabidopsis thaliana OX=3702 GN=CAR9 PE=2 SV=...	[more]
Q9LVH4	1.0e-53	59.39	Protein C2-DOMAIN ABA-RELATED 4 OS=Arabidopsis thaliana OX=3702 GN=CAR4 PE=1 SV=...	[more]
Q9ZVF1	6.6e-53	58.90	Protein C2-DOMAIN ABA-RELATED 10 OS=Arabidopsis thaliana OX=3702 GN=CAR10 PE=2 S...	[more]
Q9FHP6	1.1e-52	59.52	Protein C2-DOMAIN ABA-RELATED 1 OS=Arabidopsis thaliana OX=3702 GN=CAR1 PE=1 SV=...	[more]

BLAST of HG10009540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E4K2	1.5e-87	90.17	Protein C2-DOMAIN ABA-RELATED 7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3CST2	1.5e-87	90.17	protein C2-DOMAIN ABA-RELATED 7-like OS=Cucumis melo OX=3656 GN=LOC103504557 PE=...	[more]
A0A0A0KRJ0	4.2e-87	89.60	C2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G569360 PE=3 SV=...	[more]
A0A5A7TWP8	2.1e-86	89.66	Protein C2-DOMAIN ABA-RELATED 7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1E6U7	4.0e-85	87.28	protein C2-DOMAIN ABA-RELATED 7-like OS=Cucurbita moschata OX=3662 GN=LOC1114299...	[more]

BLAST of HG10009540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G70810.1	1.8e-61	66.06	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT1G70790.2	3.8e-56	59.51	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT1G70790.1	3.8e-56	59.51	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT3G17980.1	7.2e-55	59.39	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT2G01540.1	4.7e-54	58.90	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000008	C2 domain	SMART	SM00239	C2_3c	coord: 7..102 e-value: 1.2E-17 score: 74.7
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 6..92 e-value: 9.9E-22 score: 77.2
IPR000008	C2 domain	PROSITE	PS50004	C2	coord: 1..106 score: 17.949495
IPR035892	C2 domain superfamily	GENE3D	2.60.40.150	C2 domain	coord: 4..164 e-value: 6.9E-26 score: 93.2
IPR035892	C2 domain superfamily	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 2..158
IPR044562	Protein C2-DOMAIN ABA-RELATED	PANTHER	PTHR45933	PROTEIN C2-DOMAIN ABA-RELATED 4	coord: 1..163
None	No IPR available	PANTHER	PTHR45933:SF12	PROTEIN C2-DOMAIN ABA-RELATED 10	coord: 1..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10009540.1	HG10009540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009738	abscisic acid-activated signaling pathway
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0016868	intramolecular transferase activity, phosphotransferases
molecular_function	GO:0046872	metal ion binding