
HG10009538 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGCTGTATAAGCAGAAGAAGAATCAGAATGTTAAGGGCAACAGGCTCTTGATCAGCATCAATGTCCTTGGCAGTGCTGGTCCTATTCGTTTTATTGTTAACGAGGAGCAACTTGTTGCTGCTGTTATTGATACCGCGTTGAAATCATACGCGCGTGAGGGCCGGCTGCCGATTCTTGGGTCCGATCTTAGAGATTTTCAGCTTTACTGCCCAAATGCTGGACCAGATGGTAATTCAATATTCAATCGTGTTTTGCAACAATTTTCCATAACAATCATTTTGCATGTTTCCAATCTGAAATGGCTGGGGAAAATTGTGATATTATTCATAAATTTGTTGTCTCTATCTCAATTTTCCCCTTAGTTTTGTGATGGGGATCTCTGTTCTGGGATTTGTTCTGTGTTGGGATCTCTGTTTCCTATATTGAGAATTCTTTGTTCACAATAGGAAAAACAAATCTGGGGTTTCGTATTTCTGATGTTGTTGTAAATTTTTCTGCAGCCTTGAGTCCATGGGACACAATTGGATCGCACGGAGCTCGAAACTTCATGTTGTGCAAGAAACCACAGGCAGAGAAAGAGGCAGAAGATGGAAAATCCCCACCAGGGCCAACCATCCCTCGCAAAGGCGCAGGGAGCTGGAAGTCATGGATCAACAAGTCTCTGAATTTGAAAATCTATTCCCATTGA ATGTTGCTGTATAAGCAGAAGAAGAATCAGAATGTTAAGGGCAACAGGCTCTTGATCAGCATCAATGTCCTTGGCAGTGCTGGTCCTATTCGTTTTATTGTTAACGAGGAGCAACTTGTTGCTGCTGTTATTGATACCGCGTTGAAATCATACGCGCGTGAGGGCCGGCTGCCGATTCTTGGGTCCGATCTTAGAGATTTTCAGCTTTACTGCCCAAATGCTGGACCAGATGCCTTGAGTCCATGGGACACAATTGGATCGCACGGAGCTCGAAACTTCATGTTGTGCAAGAAACCACAGGCAGAGAAAGAGGCAGAAGATGGAAAATCCCCACCAGGGCCAACCATCCCTCGCAAAGGCGCAGGGAGCTGGAAGTCATGGATCAACAAGTCTCTGAATTTGAAAATCTATTCCCATTGA ATGTTGCTGTATAAGCAGAAGAAGAATCAGAATGTTAAGGGCAACAGGCTCTTGATCAGCATCAATGTCCTTGGCAGTGCTGGTCCTATTCGTTTTATTGTTAACGAGGAGCAACTTGTTGCTGCTGTTATTGATACCGCGTTGAAATCATACGCGCGTGAGGGCCGGCTGCCGATTCTTGGGTCCGATCTTAGAGATTTTCAGCTTTACTGCCCAAATGCTGGACCAGATGCCTTGAGTCCATGGGACACAATTGGATCGCACGGAGCTCGAAACTTCATGTTGTGCAAGAAACCACAGGCAGAGAAAGAGGCAGAAGATGGAAAATCCCCACCAGGGCCAACCATCCCTCGCAAAGGCGCAGGGAGCTGGAAGTCATGGATCAACAAGTCTCTGAATTTGAAAATCTATTCCCATTGA MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPILGSDLRDFQLYCPNAGPDALSPWDTIGSHGARNFMLCKKPQAEKEAEDGKSPPGPTIPRKGAGSWKSWINKSLNLKIYSH Homology
BLAST of HG10009538 vs. NCBI nr
Match: XP_016898863.1 (PREDICTED: uncharacterized protein At4g22758-like [Cucumis melo]) HSP 1 Score: 276.6 bits (706), Expect = 1.2e-70 Identity = 133/139 (95.68%), Postives = 135/139 (97.12%), Query Frame = 0
BLAST of HG10009538 vs. NCBI nr
Match: XP_004150595.1 (uncharacterized protein At4g22758 [Cucumis sativus] >KGN51491.1 hypothetical protein Csa_007791 [Cucumis sativus]) HSP 1 Score: 269.6 bits (688), Expect = 1.5e-68 Identity = 130/139 (93.53%), Postives = 132/139 (94.96%), Query Frame = 0
BLAST of HG10009538 vs. NCBI nr
Match: XP_038875275.1 (uncharacterized protein At4g22758 isoform X1 [Benincasa hispida]) HSP 1 Score: 267.7 bits (683), Expect = 5.6e-68 Identity = 130/139 (93.53%), Postives = 131/139 (94.24%), Query Frame = 0
BLAST of HG10009538 vs. NCBI nr
Match: XP_038875276.1 (uncharacterized protein At4g22758 isoform X2 [Benincasa hispida]) HSP 1 Score: 267.7 bits (683), Expect = 5.6e-68 Identity = 130/139 (93.53%), Postives = 131/139 (94.24%), Query Frame = 0
BLAST of HG10009538 vs. NCBI nr
Match: XP_022939519.1 (uncharacterized protein At4g22758-like [Cucurbita moschata] >XP_023551231.1 uncharacterized protein At4g22758-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 265.4 bits (677), Expect = 2.8e-67 Identity = 128/139 (92.09%), Postives = 131/139 (94.24%), Query Frame = 0
BLAST of HG10009538 vs. ExPASy Swiss-Prot
Match: Q56XJ7 (Uncharacterized protein At4g22758 OS=Arabidopsis thaliana OX=3702 GN=At4g22758 PE=2 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 1.2e-04 Identity = 34/106 (32.08%), Postives = 51/106 (48.11%), Query Frame = 0
BLAST of HG10009538 vs. ExPASy TrEMBL
Match: A0A1S4DSB9 (uncharacterized protein At4g22758-like OS=Cucumis melo OX=3656 GN=LOC107990297 PE=4 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 5.8e-71 Identity = 133/139 (95.68%), Postives = 135/139 (97.12%), Query Frame = 0
BLAST of HG10009538 vs. ExPASy TrEMBL
Match: A0A0A0KUW8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G569870 PE=4 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 7.1e-69 Identity = 130/139 (93.53%), Postives = 132/139 (94.96%), Query Frame = 0
BLAST of HG10009538 vs. ExPASy TrEMBL
Match: A0A6J1FHE7 (uncharacterized protein At4g22758-like OS=Cucurbita moschata OX=3662 GN=LOC111445404 PE=4 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 1.3e-67 Identity = 128/139 (92.09%), Postives = 131/139 (94.24%), Query Frame = 0
BLAST of HG10009538 vs. ExPASy TrEMBL
Match: A0A6J1DDM7 (uncharacterized protein At4g22758-like OS=Momordica charantia OX=3673 GN=LOC111020076 PE=4 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 3.7e-65 Identity = 126/140 (90.00%), Postives = 129/140 (92.14%), Query Frame = 0
BLAST of HG10009538 vs. ExPASy TrEMBL
Match: A0A6J1H7B9 (uncharacterized protein At4g22758-like OS=Cucurbita moschata OX=3662 GN=LOC111460829 PE=4 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 5.3e-64 Identity = 123/139 (88.49%), Postives = 128/139 (92.09%), Query Frame = 0
BLAST of HG10009538 vs. TAIR 10
Match: AT1G70780.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 143 Blast hits to 143 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 188.7 bits (478), Expect = 3.1e-48 Identity = 97/141 (68.79%), Postives = 111/141 (78.72%), Query Frame = 0
BLAST of HG10009538 vs. TAIR 10
Match: AT1G23150.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70780.1); Has 124 Blast hits to 124 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 181.8 bits (460), Expect = 3.8e-46 Identity = 96/142 (67.61%), Postives = 107/142 (75.35%), Query Frame = 0
BLAST of HG10009538 vs. TAIR 10
Match: AT5G37730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 105.1 bits (261), Expect = 4.5e-23 Identity = 51/107 (47.66%), Postives = 72/107 (67.29%), Query Frame = 0
BLAST of HG10009538 vs. TAIR 10
Match: AT2G01554.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 53.9 bits (128), Expect = 1.2e-07 Identity = 49/141 (34.75%), Postives = 64/141 (45.39%), Query Frame = 0
BLAST of HG10009538 vs. TAIR 10
Match: AT4G22758.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G27830.1). ) HSP 1 Score: 47.8 bits (112), Expect = 8.5e-06 Identity = 34/106 (32.08%), Postives = 51/106 (48.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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