HG10009505 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10009505
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr06: 6737037 .. 6741239 (-)
RNA-Seq ExpressionHG10009505
SyntenyHG10009505
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCGACCCGAGCAGCAACGACGAGAGAGCATCGGTGACGGACAACGGTGGAAACGGAGGAGGAACGACGAAGGTGAAAATGGGTTGTAATATTATTGTAGATAAAAATGGAATAAGGTCACAATATTTGTTGAGAAAATATGCATAGAAAAGAAGAAAAAAGAAAAACCAGAGCTTTGCAAAATCCCACTCCTTAAATTTTTCCTAACCTTTCAAAAGAGAGGCAGATTTAAGGGATTCGGGAGTGTGTCTTATGAATTGCATTGCAAAGGGGAATTGAGGGTAACGGTCCGAATTTATGTTTTTTTTACGAAAATAGTCTTCTTCTTTTTTTCTTGTTTTGTTTTCTTTTTAGTGTTGAAGACATGGGCTGTAAGAGATGCATACAAGCAAAGACTTTATTAAGGGGTTTGTAAGAGTGTGATTTTAGGGGTTTTTTTTTTTTTTTTCGTCGCTGCTGGGCATGCCTCACTTACACCAAGCATGTATTTCTCATCATTTTAATGCAAAATTATTTACTTTTTTGCGTTGATTGAATTGCGTTTATTTGTGTAAATTTTGATTTGTTGTTTCAAGTCGAGTCGCATTGAACTCTAAAAGTTTTTAGGTCCTTCGTCCTTGCCTCATGGGACAATATAGACCGGTTAGCGTGGTTAGTTGCTAAGAGGTTGTTCACGATTAGTTCTTTTTAATTTAAATTAATATGATATTTATTTTATAGTTAGACATTGTATTATATAAAAGAAAAATGATTGCTTGTTGGACTCGAATTTTTTGAGATAAAAAATTATGAAATTCAAAGAAGCTGTCGTGTGAATCAGGAGTTTTTGATACACACCTCAATTACACAGGCTAGAAAGTTTGAATTAGATGGACAATTTTATGTATTCATGCTTGTTACAAGAAAATAGGGGAAAAAAATAGAAAATGAAAAAGAATTATATACCATGAAAACTCTTTCCTGGAACTGGACACATGTTTGAATTATTGCCCCACATTGTAAAATAACCAAAAAAAAAAAGGAAAAAAAAAAGTTAATCATAGCGAAAACTCGATATCAGATAGCTCAAATGATAAAATGCATATCATTTGATTCGGCAACAATACTAATCAATTGTATTTCATAATAAAGGACTTTTATCTTTTTTTATCAATGGATTTTAGGTGAAGTAAAATGAAGCCAAAAAAGCAACATAAAATCTATTTGATGTGAACAATAATGAAGACTTTGGCACAGTAGAAATTTGAAAACATGGAGATTCCATTCTATCTTTTATTCAACTTTTGAAAAGCTTTATGGCATTGGATTATAAAAAAGAGGTGTAGATTACTGTTAGGGATGCTTCACTTTTTATGTTTCCTGTAAAGTCAGTCAAATGTTCACAAGAAATATAACAAAATGATGCAAAGAACATTGTGTATATCTCTGTGTCACACAATATATACAATACATACATACATACATACATACATACACACACAAACACACACACACACACACACACATATATATATATATATATATATATATATATATATATATATGATACATTTGTAAAAAACTACCAAGACATTTTGCACTGGTTTGAATCAAAACCCATGTTTTCATTTTTACCCTATACTCTAGCTCAATGCGACATTTTACCTATAAACTTCAAATTATATTTGATCGTTTCTGAAACCAAACTAACCAGGAACAAAAAGGTTGATAACTTTCAATACGAAGGAGAATTAAGAAGTGGATCAGTTTTGATCACTGACTACAAAGTACAAAGGACAGGTGAGTAGAGAATCGAGCCATTAGTTAATAACTTAATTGTTTTTAGAATGAGCCTTAAGAAAGGAGTATGAAATGACTTTATAAGTGCTCTTTGAGACTCTATTAACCCAAGGTATTATCTACTAAAGTACGAAAATTTCAAATTTTTATCCATCTAATTACATGTATGTTTTGTACCTACGGGTTTTTTTTAAAAAAAGATTAATGTGATTCTTCTCATTTTTATGATGCTAAACAGACATTACAAAAATACTAACTAAAATGGTCAAAATCGAAAAACACAAACTAAAATAGATGTTTTGAAAGTATAAAAAGGAAGAAAAGCTCAAAAAGTAAAAGGGCAAACAGTAATAAACCTTAAATTGTTTTTCGTCTTCAATAGAAAGTATCTAGTGAGTCTACAACTATGTTGGTTGGGGAAAAAACAGTGCAGAGCGGCTCTTTTGGAGAAACCATAAGCCAGTTTGAACCATAAACAGTGCAATATTACATATCTCAAACCATACCAATAGGGCCAAAATCAAACCTGTCTTTTGAAGTTTATGAACAACCACAACGCACCTAACTTTAATGTGAGTGAGTTCAAGAACAACCACACAGCACCTTAACTTTAATGTGTCAGTTTTGTAAGGGGTTGAGTTGTGAAGTCGGGAGAGTTTTAAAGCCATAGGGCCACAACAAAAAGAGATAATAAGGCATAAAATTTATGTTTTCCAATCGTTGGCCCACAAACTCCTTGGACCGAACAAGGAATTGAGTTCATAACTCCAATTCTCCCAACTCTATCTCCTTAAGCCAAACACCCCCTATAAAAGTATCTAATAAACTAGTTTCAATAAGTCGTCGAATTTTCAATTTTGTCTAATAAGTCCTTAACCTATTCTACATTTTTTGAAATTCACAAACGTACTAAACACAAAATTAAAATTTTAAGATCCTATTATTAATAAAACTCAATTTTATATTGTATAAATCAATTAACTTAAAAAGAATTAAAATATCTAGAGGCTTACTAGACCAAAAAGAAAAAAGAAGTTGAGGTAGGCATCACCAGATTATACTGCATGTACGTCATCAAGGCAACGAGTAGAACCTAATTTCAGATCTTACCTGTAAGTTAGACTTCTGTAGAAAGCATTCTCAGAGGTTCTTGATAGATTTTTTTTTCCTTCCCGAAAGGAGTACCTATGACAGACTTGTATAATTCTCCCTTGGTTATAGTAATCATATCATATTATATTATTCAAAAGGCAGGCGCTTCCTTTATTTGGTGAACCAGCAAAAGTATCAATACCTTCTCCAGTTCTCCTTCATCTGTGATTATTTTCATTTCAGTTTTGTCTACCTGTGTGTGATTTTTAAGATTCACAAGCCTACAATTTCTTCAGACATACAAACGAAGAGATGTAAGTGTTGTGATAATCAATAATAACTACGGAATAATTCCAAGCAAGGAAATCTGAATAAGAATGAAATATAGATTCATGTAAAAGGAACATATTTTTTAGGTCGTTTTCTCTAAGCTCCATCTCACTATGAGATCGACTGAGAGCAGATAAAGTGGGAAAAAGAAAATGGCCTGTCCAGAAAAAGGTGTGGGAGTGGGTTCAACTCAAAATCCAAGAAAACAGATGTGTCATTGGACTTTGTTGACATGACACACAGATTCCAAAGGGGATGGAATCTTTTGCTTCAATCATCATAGTTGTAAAGGCCTCATATCACAAATACAAAATGCAGGCACTAGCACTAATTTCGCCAATGCCAAAAGAGCCTACTTTCATTGACAATGATATAACTCAAAAAGAAATCCCACTATAGAGGAAAATCGGTAGATAAAATCGGGTAAAAGAATCATTACTACACACATTTGTCTGAATAGAATAAACTTATTGTTTTTCATGTATTCAAAAACTTGTTTTCCAACTGAGAATAAATTCTTTCTACCTTGTGTTTTCAAAGGTTCCTTCTGTTTTGATTTGTTTTGTTTTCAATGAATTTCAGAGAGTGGACATTAGCCAATGGTGGTTTGTTCCACATACTAAACGAAGGAGTAAGATAAAAAAAGTGGTGATTGATCTTATACTTGCATGTTAAGTAATTGGGAGATTCCAATTACTTCAAAAACCCAAACAGGGAAGAGGAGTTGTTGGGTGGTGAAGTGGTGTACTTAAGCCAATTCCGTGTATCACCCTGCAAGGTTTGTTAAACCCTCAATACTTTCACCCTACTCAACTACAACAGTATTCTATTGTTAAATTCCACACAATTCACTATGCCCTGTTTGGTTTCTCCCGCCCTTCCTTTTCCTCTTTCTCCCTGCAGTATGAATCTCTCTCTTCTCTCTTCAATGGTTGTGTCACTTTCTCTTCTCCTCTTCTTCGAGGCCCTCACCATCACCTCCTCTTCTCTGAAAACTAA

mRNA sequence

ATGACCGACCCGAGCAGCAACGACGAGAGAGCATCGGTGACGGACAACGGTGGAAACGGAGGAGGAACGACGAAGGTGAAAATGGGTTGTAATATTATTGTAGATAAAAATGGAATAAGAGAGTGGACATTAGCCAATGGTGGTTTGTTCCACATACTAAACGAAGGATATGAATCTCTCTCTTCTCTCTTCAATGGTTGTGTCACTTTCTCTTCTCCTCTTCTTCGAGGCCCTCACCATCACCTCCTCTTCTCTGAAAACTAA

Coding sequence (CDS)

ATGACCGACCCGAGCAGCAACGACGAGAGAGCATCGGTGACGGACAACGGTGGAAACGGAGGAGGAACGACGAAGGTGAAAATGGGTTGTAATATTATTGTAGATAAAAATGGAATAAGAGAGTGGACATTAGCCAATGGTGGTTTGTTCCACATACTAAACGAAGGATATGAATCTCTCTCTTCTCTCTTCAATGGTTGTGTCACTTTCTCTTCTCCTCTTCTTCGAGGCCCTCACCATCACCTCCTCTTCTCTGAAAACTAA

Protein sequence

MTDPSSNDERASVTDNGGNGGGTTKVKMGCNIIVDKNGIREWTLANGGLFHILNEGYESLSSLFNGCVTFSSPLLRGPHHHLLFSEN
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10009505.1HG10009505.1mRNA