HG10009489 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10009489
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	zinc finger protein 6-like
Location	Chr06: 6552689 .. 6553348 (-)
RNA-Seq Expression	HG10009489
Synteny	HG10009489

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCTCTAGAAGACCATTACCAAACCAAACAAAACAACAACAATAATAATCCCACTACTCGCTTGAAGCTCTTTGGCTTTGACGTCCAAGAAGATCTTGAAGACGACTCCGCCCCAACTCCCTCCGCCTCCTCCGACTCTGGCGGCGGATTAGGACCCACCTCCGCCGCCGCTCCCTCCTCCGGCGACCGTAAATACGAGTGTCAGTACTGCTACAGAGAGTTCGCTAATTCCCAAGCCCTCGGCGGCCACCAAAATGCCCACAAGAAAGAGCGTCAGCAGCTCAAACGCGCCCAATTACAAGCCTCTCGAAACGCTGCCGTTTTCAGAAATCCCATCGTCTCTGCCTTTGCTCCGCCGCCTCACCTTCTCCCCTCCGCCGCCGTCACTTCCTCCTCTTCTTGGCCGGTTTACATCCCCCGGGCCCCACCTCAATTCCAAGTCTCCCACGGCTGTGTCTTCACTCCCTCCTCCTACGCCGACGCTCCACCGCCGCCGCCGCCGCCTGACTTCTTTACGATGGGGTCTAGGTCGGGTCACGGGATGGTGGATGCTCCGACGTCGCTGAGCCGGTTTTCTAAAGTGGACGGTGGAACCGGGTTCGATGATGGACCGGGTTTGGATTTGCATCTCAGCCTCGCACCGTCGGCGCCATGA

mRNA sequence

ATGGCAGCTCTAGAAGACCATTACCAAACCAAACAAAACAACAACAATAATAATCCCACTACTCGCTTGAAGCTCTTTGGCTTTGACGTCCAAGAAGATCTTGAAGACGACTCCGCCCCAACTCCCTCCGCCTCCTCCGACTCTGGCGGCGGATTAGGACCCACCTCCGCCGCCGCTCCCTCCTCCGGCGACCGTAAATACGAGTGTCAGTACTGCTACAGAGAGTTCGCTAATTCCCAAGCCCTCGGCGGCCACCAAAATGCCCACAAGAAAGAGCGTCAGCAGCTCAAACGCGCCCAATTACAAGCCTCTCGAAACGCTGCCGTTTTCAGAAATCCCATCGTCTCTGCCTTTGCTCCGCCGCCTCACCTTCTCCCCTCCGCCGCCGTCACTTCCTCCTCTTCTTGGCCGGTTTACATCCCCCGGGCCCCACCTCAATTCCAAGTCTCCCACGGCTGTGTCTTCACTCCCTCCTCCTACGCCGACGCTCCACCGCCGCCGCCGCCGCCTGACTTCTTTACGATGGGGTCTAGGTCGGGTCACGGGATGGTGGATGCTCCGACGTCGCTGAGCCGGTTTTCTAAAGTGGACGGTGGAACCGGGTTCGATGATGGACCGGGTTTGGATTTGCATCTCAGCCTCGCACCGTCGGCGCCATGA

Coding sequence (CDS)

ATGGCAGCTCTAGAAGACCATTACCAAACCAAACAAAACAACAACAATAATAATCCCACTACTCGCTTGAAGCTCTTTGGCTTTGACGTCCAAGAAGATCTTGAAGACGACTCCGCCCCAACTCCCTCCGCCTCCTCCGACTCTGGCGGCGGATTAGGACCCACCTCCGCCGCCGCTCCCTCCTCCGGCGACCGTAAATACGAGTGTCAGTACTGCTACAGAGAGTTCGCTAATTCCCAAGCCCTCGGCGGCCACCAAAATGCCCACAAGAAAGAGCGTCAGCAGCTCAAACGCGCCCAATTACAAGCCTCTCGAAACGCTGCCGTTTTCAGAAATCCCATCGTCTCTGCCTTTGCTCCGCCGCCTCACCTTCTCCCCTCCGCCGCCGTCACTTCCTCCTCTTCTTGGCCGGTTTACATCCCCCGGGCCCCACCTCAATTCCAAGTCTCCCACGGCTGTGTCTTCACTCCCTCCTCCTACGCCGACGCTCCACCGCCGCCGCCGCCGCCTGACTTCTTTACGATGGGGTCTAGGTCGGGTCACGGGATGGTGGATGCTCCGACGTCGCTGAGCCGGTTTTCTAAAGTGGACGGTGGAACCGGGTTCGATGATGGACCGGGTTTGGATTTGCATCTCAGCCTCGCACCGTCGGCGCCATGA

Protein sequence

MAALEDHYQTKQNNNNNNPTTRLKLFGFDVQEDLEDDSAPTPSASSDSGGGLGPTSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSAFAPPPHLLPSAAVTSSSSWPVYIPRAPPQFQVSHGCVFTPSSYADAPPPPPPPDFFTMGSRSGHGMVDAPTSLSRFSKVDGGTGFDDGPGLDLHLSLAPSAP

Homology

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BLAST of HG10009489 vs. NCBI nr
Match: XP_038875418.1 (zinc finger protein GIS3-like [Benincasa hispida])

HSP 1 Score: 407.9 bits (1047), Expect = 5.5e-110
Identity = 210/222 (94.59%), Postives = 213/222 (95.95%), Query Frame = 0


Query: 1   MAALEDHYQTKQNNNNNNPTTRLKLFGFDVQEDLEDDSAPTPSASSDSGGGLGPTSAAA- 60
           MAALE+HYQ+KQNNNNNNP TRLKLFGFDVQEDLEDDSAPTPSASSDSGGGL P SAAA 
Sbjct: 1   MAALENHYQSKQNNNNNNPATRLKLFGFDVQEDLEDDSAPTPSASSDSGGGLTPASAAAP 60

Query: 61  PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSAFA 120
           PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSAFA
Sbjct: 61  PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSAFA 120

Query: 121 PPPHLLPSAA--VTSSSSWPVYIPRAPPQFQVSHGCVFTPSSYADAPPPPPPPDFFTMGS 180
           PPPHLLPSAA  VTSSSSWPVYIPR PPQFQVSHGCVFT SSYADAPPPPPPPDFF MGS
Sbjct: 121 PPPHLLPSAAASVTSSSSWPVYIPRVPPQFQVSHGCVFTHSSYADAPPPPPPPDFF-MGS 180

Query: 181 RSGHGMVDAPTSLSRFSKVDGGTGFDDGPGLDLHLSLAPSAP 220
           RSGHGMVDAPTSLSRFSKVDGGTGFDDGPGLDLHLSLAP+AP
Sbjct: 181 RSGHGMVDAPTSLSRFSKVDGGTGFDDGPGLDLHLSLAPAAP 221

[Close]

BLAST of HG10009489 vs. NCBI nr
Match: TYK00272.1 (zinc finger protein 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 368.2 bits (944), Expect = 4.8e-98
Identity = 194/224 (86.61%), Postives = 199/224 (88.84%), Query Frame = 0


Query: 1   MAALEDHYQTKQNNNNNNPTTRLKLFGFDVQEDL-EDDSAPTPSASSDSGGGLGPTSAAA 60
           MAALE+HYQTKQNNNNN  TTRLKLFGFDVQEDL +DDS PT   SSDSG       AA 
Sbjct: 1   MAALENHYQTKQNNNNNPATTRLKLFGFDVQEDLDQDDSTPT---SSDSG-------AAV 60

Query: 61  PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSAFA 120
           PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIV+AFA
Sbjct: 61  PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVAAFA 120

Query: 121 PPPHLLPSAAVTSSSSWPVYIPRAPPQFQVSHGCVFTPSSY----ADAPPPPPPPDFFTM 180
           PPPHLLPSAAVT+SSSWPVYIPRAPPQFQVSHGCVFTPSS      DAPPPP PPDFFTM
Sbjct: 121 PPPHLLPSAAVTASSSWPVYIPRAPPQFQVSHGCVFTPSSSYGGGVDAPPPPSPPDFFTM 180

Query: 181 GSRSGHGMVDAPTSLSRFSKVDGGTGFDDGPGLDLHLSLAPSAP 220
           GSRS HGMVDAP SLSRFSKVDGGT FDDGPGLDLHLSLAP+AP
Sbjct: 181 GSRSSHGMVDAPMSLSRFSKVDGGTAFDDGPGLDLHLSLAPAAP 214

[Close]

BLAST of HG10009489 vs. NCBI nr
Match: XP_008467196.1 (PREDICTED: zinc finger protein 6-like [Cucumis melo])

HSP 1 Score: 368.2 bits (944), Expect = 4.8e-98
Identity = 194/224 (86.61%), Postives = 199/224 (88.84%), Query Frame = 0


Query: 1   MAALEDHYQTKQNNNNNNPTTRLKLFGFDVQEDL-EDDSAPTPSASSDSGGGLGPTSAAA 60
           MAALE+HYQTKQNNNNN  TTRLKLFGFDVQEDL +DDS PT   SSDSG       AA 
Sbjct: 1   MAALENHYQTKQNNNNNPATTRLKLFGFDVQEDLDQDDSTPT---SSDSG-------AAV 60

Query: 61  PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSAFA 120
           PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIV+AFA
Sbjct: 61  PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVAAFA 120

Query: 121 PPPHLLPSAAVTSSSSWPVYIPRAPPQFQVSHGCVFTPSSY----ADAPPPPPPPDFFTM 180
           PPPHLLPSAAVT+SSSWPVYIPRAPPQFQVSHGCVFTPSS      DAPPPP PPDFFTM
Sbjct: 121 PPPHLLPSAAVTASSSWPVYIPRAPPQFQVSHGCVFTPSSSYGGGGDAPPPPSPPDFFTM 180

Query: 181 GSRSGHGMVDAPTSLSRFSKVDGGTGFDDGPGLDLHLSLAPSAP 220
           GSRS HGMVDAP SLSRFSKVDGGT FDDGPGLDLHLSLAP+AP
Sbjct: 181 GSRSSHGMVDAPMSLSRFSKVDGGTAFDDGPGLDLHLSLAPAAP 214

[Close]

BLAST of HG10009489 vs. NCBI nr
Match: NP_001295848.1 (zinc finger protein 6-like [Cucumis sativus] >AIS39467.1 multicellular trichome development C2H2 zinc finger transcription factor [Cucumis sativus] >KGN51544.1 hypothetical protein Csa_008286 [Cucumis sativus])

HSP 1 Score: 361.7 bits (927), Expect = 4.5e-96
Identity = 193/224 (86.16%), Postives = 198/224 (88.39%), Query Frame = 0


Query: 1   MAALEDHYQTKQNNNNNNPTTRLKLFGFDVQEDL-EDDSAPTPSASSDSGGGLGPTSAAA 60
           MAALE+HYQTKQ NNNN  TTRLKLFGFDVQEDL +DDS PT   SSDSG       AA 
Sbjct: 1   MAALENHYQTKQ-NNNNPATTRLKLFGFDVQEDLDQDDSTPT---SSDSG-------AAV 60

Query: 61  PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSAFA 120
           PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIV+AFA
Sbjct: 61  PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVAAFA 120

Query: 121 PPPHLLPSAAVTSSSSWPVYIPRAPPQFQVSHGCVFTPSSY----ADAPPPPPPPDFFTM 180
           PPPHLLPSAAVT+SSSWPVYIPRAPPQFQVSHGCVFTPSS      DAPPPP PPDFFTM
Sbjct: 121 PPPHLLPSAAVTASSSWPVYIPRAPPQFQVSHGCVFTPSSSYGGGGDAPPPPSPPDFFTM 180

Query: 181 GSRSGHGMVDAPTSLSRFSKVDGGTGFDDGPGLDLHLSLAPSAP 220
           GSRS HGMVDAP SLSRFSKVDGGT FDDGPGLDLHLSLAP+AP
Sbjct: 181 GSRSSHGMVDAPMSLSRFSKVDGGTAFDDGPGLDLHLSLAPAAP 213

[Close]

BLAST of HG10009489 vs. NCBI nr
Match: XP_022939421.1 (zinc finger protein GIS3-like [Cucurbita moschata])

HSP 1 Score: 334.7 bits (857), Expect = 5.9e-88
Identity = 179/220 (81.36%), Postives = 187/220 (85.00%), Query Frame = 0


Query: 1   MAALEDHYQTKQNNNNNNPTTRLKLFGFDVQEDLEDDSAPTPSASSDSGGGLGPTSAAAP 60
           MAALE+HYQ+KQ    NNPTTRLKLFGFDVQEDLEDDS PTPSASSD        SAAAP
Sbjct: 1   MAALEEHYQSKQ---TNNPTTRLKLFGFDVQEDLEDDSTPTPSASSD--------SAAAP 60

Query: 61  SSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSAFAP 120
           SSGDRKYECQYCYREFANSQALGGHQNAHKKERQQ KRAQLQASRNA VFRNPIVSAFAP
Sbjct: 61  SSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFRNPIVSAFAP 120

Query: 121 PPHLLPSAAVTSSSSW-PVYIPRAPPQFQVSHGCVFTPSSYADAPPPPPPPDFFTMGSRS 180
           PPHLLPSA +TSSSSW PVY+P+APPQFQVSHGCVFT        PPPPPP FF+ GSRS
Sbjct: 121 PPHLLPSAVLTSSSSWPPVYMPQAPPQFQVSHGCVFT--------PPPPPPPFFSTGSRS 180

Query: 181 GHGMVDAPTSLSRFSKVDGGTGFDDGPGLDLHLSLAPSAP 220
            HG+VD P SLSRFS V+ G GFDDGPGLDLHLSLAPSAP
Sbjct: 181 AHGIVDGP-SLSRFSTVEDGPGFDDGPGLDLHLSLAPSAP 200

[Close]

BLAST of HG10009489 vs. ExPASy Swiss-Prot
Match: Q9C9H1 (Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.1e-39
Identity = 115/237 (48.52%), Postives = 135/237 (56.96%), Query Frame = 0


Query: 15  NNNNPTTRLKLFGFDV--QEDLEDDSAPT------------PSASSDSGGGLGPTSAAAP 74
           ++   T+RLKLFGF V  +ED  D S  T            P+ SS   GG   +     
Sbjct: 7   SSKTTTSRLKLFGFSVDGEEDFSDQSVKTNLSSVSPERGEFPAGSSGRSGGGVRSRGGGG 66

Query: 75  SSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAV----------- 134
             G+RKYECQYC REF NSQALGGHQNAHKKERQQLKRAQLQA+RNAA            
Sbjct: 67  GGGERKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSNAGSASQF 126

Query: 135 FRNPIVSAFAPPPHLLPSAAVTSSSSWP-VYIPR-APPQFQVSHGCVFTPSSYADAPP-- 194
            RNPIVSAFAPPPHLL S+AV      P +Y+PR +P Q  VSHGCV    S        
Sbjct: 127 LRNPIVSAFAPPPHLLSSSAVPQPMGGPWMYLPRVSPSQLHVSHGCVIQDGSGGAGAGGF 186

Query: 195 ----PPPPPDFFTMGSRSGHGMVDAP-TSLSRFSKVDGGTGFDDGPGLDLHLSLAPS 218
                     F  +G++  H     P  S++ FS+ + GT FDDG GLDLHLSLAP+
Sbjct: 187 SYEYGARDSGFGVVGAQMRHVQAHGPRPSVNGFSR-EVGTTFDDGLGLDLHLSLAPA 242

[Close]

BLAST of HG10009489 vs. ExPASy Swiss-Prot
Match: Q39265 (Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.4e-20
Identity = 86/217 (39.63%), Postives = 102/217 (47.00%), Query Frame = 0


Query: 20  TTRLKLFGFDVQEDLEDDSAPTPSASSDSGGGLGPTSAAAPSSGDRKYECQYCYREFANS 79
           T+ LKLFG ++   LE  S    S+    G G G        S  RKYECQYC REFANS
Sbjct: 5   TSSLKLFGINL---LETTSVQNQSSEPRPGSGSG--------SESRKYECQYCCREFANS 64

Query: 80  QALGGHQNAHKKERQQLKRAQLQASR------NAAVFRNPIVSAFAPPPHLLPSAAVTSS 139
           QALGGHQNAHKKERQ LKRAQ+ A+R      N     NP++SAFAP PHLL        
Sbjct: 65  QALGGHQNAHKKERQLLKRAQMLATRGLPRHHNFHPHTNPLLSAFAPLPHLLSQ------ 124

Query: 140 SSWPVYIPRAPPQFQVSHGCVFTPSSYADAPPPPPPPDFFTMG-SRSGHGMVD------- 199
                  P  PP   +S     +   Y +         +F  G    G GM         
Sbjct: 125 -------PHPPPHMMLSPSSSSSKWLYGEHMSSQNAVGYFHGGRGLYGGGMESMAGEVKT 184

Query: 200 ---APTSLSRF---SKVDGGTGFDDGPGLDLHLSLAP 217
              +   + RF   S    G   ++G GLDLHLSL P
Sbjct: 185 HGGSLPEMRRFAGDSDRSSGIKLENGIGLDLHLSLGP 197

[Close]

BLAST of HG10009489 vs. ExPASy Swiss-Prot
Match: Q39264 (Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.0e-10
Identity = 43/115 (37.39%), Postives = 66/115 (57.39%), Query Frame = 0


Query: 9   QTKQNNNNNNPTTRLKLFGFDVQEDLEDDSAPTPSASSDSGGGLGPTSAAAPSSGDRKYE 68
           +T ++++ ++    +KLFGF++   +     P  + +         TS        +++E
Sbjct: 9   RTGESSSGSSSDKTIKLFGFEL---ISGSRTPEITTAESVSSSTNTTSLTVM----KRHE 68

Query: 69  CQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVF-----RNPIVSAF 119
           CQYC +EFANSQALGGHQNAHKKER + KR QLQA R +  +     + PI ++F
Sbjct: 69  CQYCGKEFANSQALGGHQNAHKKERLKKKRLQLQARRASIGYYLTNHQQPITTSF 116

[Close]

BLAST of HG10009489 vs. ExPASy Swiss-Prot
Match: P93751 (Zinc finger protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZFP8 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.4e-07
Identity = 24/41 (58.54%), Postives = 32/41 (78.05%), Query Frame = 0


Query: 61  SSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQL 102
           ++ +R++EC YC+R F  SQALGGHQNAHK+ERQ  KR  +
Sbjct: 89  NNNNRRFECHYCFRNFPTSQALGGHQNAHKRERQHAKRGSM 129

[Close]

BLAST of HG10009489 vs. ExPASy Swiss-Prot
Match: Q9FG05 (Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.4e-07
Identity = 40/99 (40.40%), Postives = 57/99 (57.58%), Query Frame = 0


Query: 13  NNNNNNPTTR-LKLFGFDVQEDLEDDSAPTPSASSDSGGGLGPTSAAAPSSGDRKYECQY 72
           N N+ +P  R ++LFGF+     E+      S S D+        +    + +++++C Y
Sbjct: 8   NVNSFSPKERPIRLFGFEFGASHEE------SESKDNYN--ENNESIKDDNKEKRFKCHY 67

Query: 73  CYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVF 111
           C+R F  SQALGGHQNAHK+ERQQ KR  L +  NAA F
Sbjct: 68  CFRNFPTSQALGGHQNAHKRERQQTKRFNLHS--NAAAF 96

[Close]

BLAST of HG10009489 vs. ExPASy TrEMBL
Match: A0A5D3BNG5 (Zinc finger protein 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00130 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.3e-98
Identity = 194/224 (86.61%), Postives = 199/224 (88.84%), Query Frame = 0


Query: 1   MAALEDHYQTKQNNNNNNPTTRLKLFGFDVQEDL-EDDSAPTPSASSDSGGGLGPTSAAA 60
           MAALE+HYQTKQNNNNN  TTRLKLFGFDVQEDL +DDS PT   SSDSG       AA 
Sbjct: 1   MAALENHYQTKQNNNNNPATTRLKLFGFDVQEDLDQDDSTPT---SSDSG-------AAV 60

Query: 61  PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSAFA 120
           PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIV+AFA
Sbjct: 61  PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVAAFA 120

Query: 121 PPPHLLPSAAVTSSSSWPVYIPRAPPQFQVSHGCVFTPSSY----ADAPPPPPPPDFFTM 180
           PPPHLLPSAAVT+SSSWPVYIPRAPPQFQVSHGCVFTPSS      DAPPPP PPDFFTM
Sbjct: 121 PPPHLLPSAAVTASSSWPVYIPRAPPQFQVSHGCVFTPSSSYGGGVDAPPPPSPPDFFTM 180

Query: 181 GSRSGHGMVDAPTSLSRFSKVDGGTGFDDGPGLDLHLSLAPSAP 220
           GSRS HGMVDAP SLSRFSKVDGGT FDDGPGLDLHLSLAP+AP
Sbjct: 181 GSRSSHGMVDAPMSLSRFSKVDGGTAFDDGPGLDLHLSLAPAAP 214

[Close]

BLAST of HG10009489 vs. ExPASy TrEMBL
Match: A0A1S3CSY8 (zinc finger protein 6-like OS=Cucumis melo OX=3656 GN=LOC103504603 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.3e-98
Identity = 194/224 (86.61%), Postives = 199/224 (88.84%), Query Frame = 0


Query: 1   MAALEDHYQTKQNNNNNNPTTRLKLFGFDVQEDL-EDDSAPTPSASSDSGGGLGPTSAAA 60
           MAALE+HYQTKQNNNNN  TTRLKLFGFDVQEDL +DDS PT   SSDSG       AA 
Sbjct: 1   MAALENHYQTKQNNNNNPATTRLKLFGFDVQEDLDQDDSTPT---SSDSG-------AAV 60

Query: 61  PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSAFA 120
           PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIV+AFA
Sbjct: 61  PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVAAFA 120

Query: 121 PPPHLLPSAAVTSSSSWPVYIPRAPPQFQVSHGCVFTPSSY----ADAPPPPPPPDFFTM 180
           PPPHLLPSAAVT+SSSWPVYIPRAPPQFQVSHGCVFTPSS      DAPPPP PPDFFTM
Sbjct: 121 PPPHLLPSAAVTASSSWPVYIPRAPPQFQVSHGCVFTPSSSYGGGGDAPPPPSPPDFFTM 180

Query: 181 GSRSGHGMVDAPTSLSRFSKVDGGTGFDDGPGLDLHLSLAPSAP 220
           GSRS HGMVDAP SLSRFSKVDGGT FDDGPGLDLHLSLAP+AP
Sbjct: 181 GSRSSHGMVDAPMSLSRFSKVDGGTAFDDGPGLDLHLSLAPAAP 214

[Close]

BLAST of HG10009489 vs. ExPASy TrEMBL
Match: A0A0A0KRQ5 (Multicellular trichome development C2H2 zinc finger transcription factor OS=Cucumis sativus OX=3659 GN=Gl-3 PE=2 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 2.2e-96
Identity = 193/224 (86.16%), Postives = 198/224 (88.39%), Query Frame = 0


Query: 1   MAALEDHYQTKQNNNNNNPTTRLKLFGFDVQEDL-EDDSAPTPSASSDSGGGLGPTSAAA 60
           MAALE+HYQTKQ NNNN  TTRLKLFGFDVQEDL +DDS PT   SSDSG       AA 
Sbjct: 1   MAALENHYQTKQ-NNNNPATTRLKLFGFDVQEDLDQDDSTPT---SSDSG-------AAV 60

Query: 61  PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSAFA 120
           PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIV+AFA
Sbjct: 61  PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVAAFA 120

Query: 121 PPPHLLPSAAVTSSSSWPVYIPRAPPQFQVSHGCVFTPSSY----ADAPPPPPPPDFFTM 180
           PPPHLLPSAAVT+SSSWPVYIPRAPPQFQVSHGCVFTPSS      DAPPPP PPDFFTM
Sbjct: 121 PPPHLLPSAAVTASSSWPVYIPRAPPQFQVSHGCVFTPSSSYGGGGDAPPPPSPPDFFTM 180

Query: 181 GSRSGHGMVDAPTSLSRFSKVDGGTGFDDGPGLDLHLSLAPSAP 220
           GSRS HGMVDAP SLSRFSKVDGGT FDDGPGLDLHLSLAP+AP
Sbjct: 181 GSRSSHGMVDAPMSLSRFSKVDGGTAFDDGPGLDLHLSLAPAAP 213

[Close]

BLAST of HG10009489 vs. ExPASy TrEMBL
Match: A0A6J1FFV2 (zinc finger protein GIS3-like OS=Cucurbita moschata OX=3662 GN=LOC111445339 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.9e-88
Identity = 179/220 (81.36%), Postives = 187/220 (85.00%), Query Frame = 0


Query: 1   MAALEDHYQTKQNNNNNNPTTRLKLFGFDVQEDLEDDSAPTPSASSDSGGGLGPTSAAAP 60
           MAALE+HYQ+KQ    NNPTTRLKLFGFDVQEDLEDDS PTPSASSD        SAAAP
Sbjct: 1   MAALEEHYQSKQ---TNNPTTRLKLFGFDVQEDLEDDSTPTPSASSD--------SAAAP 60

Query: 61  SSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSAFAP 120
           SSGDRKYECQYCYREFANSQALGGHQNAHKKERQQ KRAQLQASRNA VFRNPIVSAFAP
Sbjct: 61  SSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFRNPIVSAFAP 120

Query: 121 PPHLLPSAAVTSSSSW-PVYIPRAPPQFQVSHGCVFTPSSYADAPPPPPPPDFFTMGSRS 180
           PPHLLPSA +TSSSSW PVY+P+APPQFQVSHGCVFT        PPPPPP FF+ GSRS
Sbjct: 121 PPHLLPSAVLTSSSSWPPVYMPQAPPQFQVSHGCVFT--------PPPPPPPFFSTGSRS 180

Query: 181 GHGMVDAPTSLSRFSKVDGGTGFDDGPGLDLHLSLAPSAP 220
            HG+VD P SLSRFS V+ G GFDDGPGLDLHLSLAPSAP
Sbjct: 181 AHGIVDGP-SLSRFSTVEDGPGFDDGPGLDLHLSLAPSAP 200

[Close]

BLAST of HG10009489 vs. ExPASy TrEMBL
Match: A0A6J1JUL8 (zinc finger protein GIS3-like OS=Cucurbita maxima OX=3661 GN=LOC111489855 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 3.2e-87
Identity = 177/219 (80.82%), Postives = 186/219 (84.93%), Query Frame = 0


Query: 1   MAALEDHYQTKQNNNNNNPTTRLKLFGFDVQEDLEDDSAPTPSASSDSGGGLGPTSAAAP 60
           MAALE+HYQ+KQ   NNNPTTRLKLFGFDVQEDLEDDS PTPSASSDSG        AAP
Sbjct: 1   MAALEEHYQSKQ---NNNPTTRLKLFGFDVQEDLEDDSTPTPSASSDSG--------AAP 60

Query: 61  SSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSAFAP 120
           SSGDRKYECQYCYREFANSQALGGHQNAHKKERQQ KRAQLQASRNA VFRNPIVSAFAP
Sbjct: 61  SSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFRNPIVSAFAP 120

Query: 121 PPHLLPSAAVTSSSSW-PVYIPRAPPQFQVSHGCVFTPSSYADAPPPPPPPDFFTMGSRS 180
           PPHLLPSA +TSSSSW PVY+P+ PPQFQVSHGCVFT        PPPPPP FF+ GSRS
Sbjct: 121 PPHLLPSAVLTSSSSWPPVYMPQLPPQFQVSHGCVFT--------PPPPPPPFFSTGSRS 180

Query: 181 GHGMVDAPTSLSRFSKVDGGTGFDDGPGLDLHLSLAPSA 219
            HG+VD P SLSRFS V+ G GFDDGPGLDLHLSLAPS+
Sbjct: 181 PHGIVDGP-SLSRFSTVEDGPGFDDGPGLDLHLSLAPSS 199

[Close]

BLAST of HG10009489 vs. TAIR 10
Match: AT1G68360.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 164.9 bits (416), Expect = 7.5e-41
Identity = 115/237 (48.52%), Postives = 135/237 (56.96%), Query Frame = 0


Query: 15  NNNNPTTRLKLFGFDV--QEDLEDDSAPT------------PSASSDSGGGLGPTSAAAP 74
           ++   T+RLKLFGF V  +ED  D S  T            P+ SS   GG   +     
Sbjct: 7   SSKTTTSRLKLFGFSVDGEEDFSDQSVKTNLSSVSPERGEFPAGSSGRSGGGVRSRGGGG 66

Query: 75  SSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAV----------- 134
             G+RKYECQYC REF NSQALGGHQNAHKKERQQLKRAQLQA+RNAA            
Sbjct: 67  GGGERKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSNAGSASQF 126

Query: 135 FRNPIVSAFAPPPHLLPSAAVTSSSSWP-VYIPR-APPQFQVSHGCVFTPSSYADAPP-- 194
            RNPIVSAFAPPPHLL S+AV      P +Y+PR +P Q  VSHGCV    S        
Sbjct: 127 LRNPIVSAFAPPPHLLSSSAVPQPMGGPWMYLPRVSPSQLHVSHGCVIQDGSGGAGAGGF 186

Query: 195 ----PPPPPDFFTMGSRSGHGMVDAP-TSLSRFSKVDGGTGFDDGPGLDLHLSLAPS 218
                     F  +G++  H     P  S++ FS+ + GT FDDG GLDLHLSLAP+
Sbjct: 187 SYEYGARDSGFGVVGAQMRHVQAHGPRPSVNGFSR-EVGTTFDDGLGLDLHLSLAPA 242

[Close]

BLAST of HG10009489 vs. TAIR 10
Match: AT1G67030.1 (zinc finger protein 6 )

HSP 1 Score: 101.3 bits (251), Expect = 1.0e-21
Identity = 86/217 (39.63%), Postives = 102/217 (47.00%), Query Frame = 0


Query: 20  TTRLKLFGFDVQEDLEDDSAPTPSASSDSGGGLGPTSAAAPSSGDRKYECQYCYREFANS 79
           T+ LKLFG ++   LE  S    S+    G G G        S  RKYECQYC REFANS
Sbjct: 5   TSSLKLFGINL---LETTSVQNQSSEPRPGSGSG--------SESRKYECQYCCREFANS 64

Query: 80  QALGGHQNAHKKERQQLKRAQLQASR------NAAVFRNPIVSAFAPPPHLLPSAAVTSS 139
           QALGGHQNAHKKERQ LKRAQ+ A+R      N     NP++SAFAP PHLL        
Sbjct: 65  QALGGHQNAHKKERQLLKRAQMLATRGLPRHHNFHPHTNPLLSAFAPLPHLLSQ------ 124

Query: 140 SSWPVYIPRAPPQFQVSHGCVFTPSSYADAPPPPPPPDFFTMG-SRSGHGMVD------- 199
                  P  PP   +S     +   Y +         +F  G    G GM         
Sbjct: 125 -------PHPPPHMMLSPSSSSSKWLYGEHMSSQNAVGYFHGGRGLYGGGMESMAGEVKT 184

Query: 200 ---APTSLSRF---SKVDGGTGFDDGPGLDLHLSLAP 217
              +   + RF   S    G   ++G GLDLHLSL P
Sbjct: 185 HGGSLPEMRRFAGDSDRSSGIKLENGIGLDLHLSLGP 197

[Close]

BLAST of HG10009489 vs. TAIR 10
Match: AT1G10480.1 (zinc finger protein 5 )

HSP 1 Score: 67.0 bits (162), Expect = 2.1e-11
Identity = 43/115 (37.39%), Postives = 66/115 (57.39%), Query Frame = 0


Query: 9   QTKQNNNNNNPTTRLKLFGFDVQEDLEDDSAPTPSASSDSGGGLGPTSAAAPSSGDRKYE 68
           +T ++++ ++    +KLFGF++   +     P  + +         TS        +++E
Sbjct: 9   RTGESSSGSSSDKTIKLFGFEL---ISGSRTPEITTAESVSSSTNTTSLTVM----KRHE 68

Query: 69  CQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVF-----RNPIVSAF 119
           CQYC +EFANSQALGGHQNAHKKER + KR QLQA R +  +     + PI ++F
Sbjct: 69  CQYCGKEFANSQALGGHQNAHKKERLKKKRLQLQARRASIGYYLTNHQQPITTSF 116

[Close]

BLAST of HG10009489 vs. TAIR 10
Match: AT2G41940.1 (zinc finger protein 8 )

HSP 1 Score: 58.2 bits (139), Expect = 9.9e-09
Identity = 24/41 (58.54%), Postives = 32/41 (78.05%), Query Frame = 0


Query: 61  SSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQL 102
           ++ +R++EC YC+R F  SQALGGHQNAHK+ERQ  KR  +
Sbjct: 89  NNNNRRFECHYCFRNFPTSQALGGHQNAHKRERQHAKRGSM 129

[Close]

BLAST of HG10009489 vs. TAIR 10
Match: AT5G06650.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 57.4 bits (137), Expect = 1.7e-08
Identity = 40/99 (40.40%), Postives = 57/99 (57.58%), Query Frame = 0


Query: 13  NNNNNNPTTR-LKLFGFDVQEDLEDDSAPTPSASSDSGGGLGPTSAAAPSSGDRKYECQY 72
           N N+ +P  R ++LFGF+     E+      S S D+        +    + +++++C Y
Sbjct: 8   NVNSFSPKERPIRLFGFEFGASHEE------SESKDNYN--ENNESIKDDNKEKRFKCHY 67

Query: 73  CYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVF 111
           C+R F  SQALGGHQNAHK+ERQQ KR  L +  NAA F
Sbjct: 68  CFRNFPTSQALGGHQNAHKRERQQTKRFNLHS--NAAAF 96

The following BLAST results are available for this feature:

BLAST of HG10009489 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875418.1	5.5e-110	94.59	zinc finger protein GIS3-like [Benincasa hispida]	[more]
TYK00272.1	4.8e-98	86.61	zinc finger protein 6-like [Cucumis melo var. makuwa]	[more]
XP_008467196.1	4.8e-98	86.61	PREDICTED: zinc finger protein 6-like [Cucumis melo]	[more]
NP_001295848.1	4.5e-96	86.16	zinc finger protein 6-like [Cucumis sativus] >AIS39467.1 multicellular trichome ...	[more]
XP_022939421.1	5.9e-88	81.36	zinc finger protein GIS3-like [Cucurbita moschata]	[more]

BLAST of HG10009489 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9H1	1.1e-39	48.52	Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1	[more]
Q39265	1.4e-20	39.63	Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1	[more]
Q39264	3.0e-10	37.39	Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1	[more]
P93751	1.4e-07	58.54	Zinc finger protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZFP8 PE=1 SV=1	[more]
Q9FG05	2.4e-07	40.40	Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1	[more]

BLAST of HG10009489 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BNG5	2.3e-98	86.61	Zinc finger protein 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3CSY8	2.3e-98	86.61	zinc finger protein 6-like OS=Cucumis melo OX=3656 GN=LOC103504603 PE=4 SV=1	[more]
A0A0A0KRQ5	2.2e-96	86.16	Multicellular trichome development C2H2 zinc finger transcription factor OS=Cucu...	[more]
A0A6J1FFV2	2.9e-88	81.36	zinc finger protein GIS3-like OS=Cucurbita moschata OX=3662 GN=LOC111445339 PE=4...	[more]
A0A6J1JUL8	3.2e-87	80.82	zinc finger protein GIS3-like OS=Cucurbita maxima OX=3661 GN=LOC111489855 PE=4 S...	[more]

BLAST of HG10009489 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68360.1	7.5e-41	48.52	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G67030.1	1.0e-21	39.63	zinc finger protein 6	[more]
AT1G10480.1	2.1e-11	37.39	zinc finger protein 5	[more]
AT2G41940.1	9.9e-09	58.54	zinc finger protein 8	[more]
AT5G06650.1	1.7e-08	40.40	C2H2 and C2HC zinc fingers superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 55..112 e-value: 2.2E-8 score: 35.8
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 67..92 e-value: 1.4E-5 score: 25.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..64
None	No IPR available	PANTHER	PTHR46353:SF9	ZINC FINGER PROTEIN GIS3	coord: 13..219
IPR044299	Zinc finger protein GIS3/ZFP5/ZFP6	PANTHER	PTHR46353	ZINC FINGER PROTEIN 5	coord: 13..219
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 69..89
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 67..94 score: 11.676262
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 63..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10009489.1	HG10009489.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009736	cytokinin-activated signaling pathway
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010090	trichome morphogenesis
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding