HG10009464 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10009464
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	LIM-domain binding protein/SEUSS
Location	Chr06: 6219810 .. 6220688 (-)
RNA-Seq Expression	HG10009464
Synteny	HG10009464

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGAGATTGAGCAGGTTGCTACTGCTCAGGGTCTGCCAACTGATCGTAACACCCTTAGTCGAATGGTCGCCCTGCATCCTGGGCTGAACAACCAAATGAATAGCCAAAATCACCTTGGCAGCAGAGGAACTTTGAGCGGTTCGGCACAAGCTGCGTTGGCACTGTCTAACTACCAGAATCTGCTAATGAGACAGAACTCGATGAATTCAACAAGTTCAAACCCACTCCAGCAGGAGACATCATCGTCATTCAATAACTCAAACCAGAGTCCTTCATCAAGCTTTCATGGGACAACTGCTATAACATCGGCACCGATGCAGAACTTGCCCAGCAGTGGTCTTTCAAGTCCTAATCCGCTTCAGCAACAATCTCAAGTTCAACAGCAACTGCATCAGCGCCCGAACACCAACAACTTACTCGTGCAAAATCATCCTCAGAGTACGCAAGGTAACGGCAACAATAATCAGGCTATGCAACATCAGATGATCCAGCAACTACTCCAGATATCTAATAACAGTGGGGGAGGCCAACAGCAACCACTTTCTGGATCAAACACAAAAGGAAGCATTGCCGGAACTTATACAGGCTACGGAGGCAGCTCTTCTGTGGCGGCTGCAGGCACAGCCAATGCATCTGGTAGTAATACGCCTGCCCCAAGCCGAAGTAATAGTTTCAAAAGTGCTTCAACTGGTGATGTACCAGCAGTCGGTGCTCGTAGCAGTGGGTTCAACCAAAGAACTGCAGATTTGCCACAAAATCTTCATTTGGATGAGGATATAATCCAGGATATAGCCCATGATTTTACAGATAATGGGTTTTTTAGCAGTGATCTTGATGATAATATGTGCTTCACCTGGAAAGGTCAACTAACTTAA

mRNA sequence

ATGCAAGAGATTGAGCAGGTTGCTACTGCTCAGGGTCTGCCAACTGATCGTAACACCCTTAGTCGAATGGTCGCCCTGCATCCTGGGCTGAACAACCAAATGAATAGCCAAAATCACCTTGGCAGCAGAGGAACTTTGAGCGGTTCGGCACAAGCTGCGTTGGCACTGTCTAACTACCAGAATCTGCTAATGAGACAGAACTCGATGAATTCAACAAGTTCAAACCCACTCCAGCAGGAGACATCATCGTCATTCAATAACTCAAACCAGAGTCCTTCATCAAGCTTTCATGGGACAACTGCTATAACATCGGCACCGATGCAGAACTTGCCCAGCAGTGGTCTTTCAAGTCCTAATCCGCTTCAGCAACAATCTCAAGTTCAACAGCAACTGCATCAGCGCCCGAACACCAACAACTTACTCGTGCAAAATCATCCTCAGAGTACGCAAGGTAACGGCAACAATAATCAGGCTATGCAACATCAGATGATCCAGCAACTACTCCAGATATCTAATAACAGTGGGGGAGGCCAACAGCAACCACTTTCTGGATCAAACACAAAAGGAAGCATTGCCGGAACTTATACAGGCTACGGAGGCAGCTCTTCTGTGGCGGCTGCAGGCACAGCCAATGCATCTGGTAGTAATACGCCTGCCCCAAGCCGAAGTAATAGTTTCAAAAGTGCTTCAACTGGTGATGTACCAGCAGTCGGTGCTCGTAGCAGTGGGTTCAACCAAAGAACTGCAGATTTGCCACAAAATCTTCATTTGGATGAGGATATAATCCAGGATATAGCCCATGATTTTACAGATAATGGGTTTTTTAGCAGTGATCTTGATGATAATATGTGCTTCACCTGGAAAGGTCAACTAACTTAA

Coding sequence (CDS)

ATGCAAGAGATTGAGCAGGTTGCTACTGCTCAGGGTCTGCCAACTGATCGTAACACCCTTAGTCGAATGGTCGCCCTGCATCCTGGGCTGAACAACCAAATGAATAGCCAAAATCACCTTGGCAGCAGAGGAACTTTGAGCGGTTCGGCACAAGCTGCGTTGGCACTGTCTAACTACCAGAATCTGCTAATGAGACAGAACTCGATGAATTCAACAAGTTCAAACCCACTCCAGCAGGAGACATCATCGTCATTCAATAACTCAAACCAGAGTCCTTCATCAAGCTTTCATGGGACAACTGCTATAACATCGGCACCGATGCAGAACTTGCCCAGCAGTGGTCTTTCAAGTCCTAATCCGCTTCAGCAACAATCTCAAGTTCAACAGCAACTGCATCAGCGCCCGAACACCAACAACTTACTCGTGCAAAATCATCCTCAGAGTACGCAAGGTAACGGCAACAATAATCAGGCTATGCAACATCAGATGATCCAGCAACTACTCCAGATATCTAATAACAGTGGGGGAGGCCAACAGCAACCACTTTCTGGATCAAACACAAAAGGAAGCATTGCCGGAACTTATACAGGCTACGGAGGCAGCTCTTCTGTGGCGGCTGCAGGCACAGCCAATGCATCTGGTAGTAATACGCCTGCCCCAAGCCGAAGTAATAGTTTCAAAAGTGCTTCAACTGGTGATGTACCAGCAGTCGGTGCTCGTAGCAGTGGGTTCAACCAAAGAACTGCAGATTTGCCACAAAATCTTCATTTGGATGAGGATATAATCCAGGATATAGCCCATGATTTTACAGATAATGGGTTTTTTAGCAGTGATCTTGATGATAATATGTGCTTCACCTGGAAAGGTCAACTAACTTAA

Protein sequence

MQEIEQVATAQGLPTDRNTLSRMVALHPGLNNQMNSQNHLGSRGTLSGSAQAALALSNYQNLLMRQNSMNSTSSNPLQQETSSSFNNSNQSPSSSFHGTTAITSAPMQNLPSSGLSSPNPLQQQSQVQQQLHQRPNTNNLLVQNHPQSTQGNGNNNQAMQHQMIQQLLQISNNSGGGQQQPLSGSNTKGSIAGTYTGYGGSSSVAAAGTANASGSNTPAPSRSNSFKSASTGDVPAVGARSSGFNQRTADLPQNLHLDEDIIQDIAHDFTDNGFFSSDLDDNMCFTWKGQLT

Homology

[Close]

BLAST of HG10009464 vs. NCBI nr
Match: XP_038906895.1 (probable transcriptional regulator SLK2 isoform X1 [Benincasa hispida])

HSP 1 Score: 472.2 bits (1214), Expect = 3.2e-129
Identity = 264/292 (90.41%), Postives = 270/292 (92.47%), Query Frame = 0


Query: 1   MQEIEQVATAQGLPTDRNTLSRMVALHPGLNNQMNSQNHLGSRGTLSGSAQAALALSNYQ 60
           MQEIEQVA AQGLPTD NTL+RMVALHPGLN+Q+NSQN L  RGTLS  AQ ALALSNYQ
Sbjct: 589 MQEIEQVANAQGLPTDHNTLTRMVALHPGLNSQVNSQNQLVGRGTLSSLAQTALALSNYQ 648

Query: 61  NLLMRQNSMNSTSSNPLQQETSSSFNNSNQSPSSSFHGTTAITSAPMQNLPSSGLSSPNP 120
           NLLMRQNSMNSTSSNPLQQE SSSFNNSNQSPSSSFHGTTAITSAPMQNLPSSGLSSPN 
Sbjct: 649 NLLMRQNSMNSTSSNPLQQEPSSSFNNSNQSPSSSFHGTTAITSAPMQNLPSSGLSSPNL 708

Query: 121 LQQQSQVQQQLHQRPNTNNLLVQNHPQSTQGNGNNNQAMQHQMIQQLLQISNNSGGGQQQ 180
            QQQSQVQ QLHQRPNT NL VQNHP STQGN NNNQAM+HQMIQQLLQIS NSGGGQQQ
Sbjct: 709 SQQQSQVQHQLHQRPNT-NLHVQNHPPSTQGNVNNNQAMEHQMIQQLLQISKNSGGGQQQ 768

Query: 181 PLSGSNTKGSIAGTYTGYGGSSSVAAAGTANASGSNTPAPSRSNSFKSASTGDVPAVGAR 240
           PL+GSNTKGSIAGTY GYGGSSSVAAAGTANASGSNTPAPSRSNSFKSASTGDV AVGAR
Sbjct: 769 PLTGSNTKGSIAGTYMGYGGSSSVAAAGTANASGSNTPAPSRSNSFKSASTGDVSAVGAR 828

Query: 241 SSGFNQRTADLPQNLHLDEDIIQDIAHDFTDNGFFSSDLDDNMCFTWKGQLT 293
           SSGFNQRT DLPQNL LDEDIIQDIAHDFTDNGFF+SDLDDNMCF WKGQLT
Sbjct: 829 SSGFNQRTTDLPQNLQLDEDIIQDIAHDFTDNGFFNSDLDDNMCFAWKGQLT 879

[Close]

BLAST of HG10009464 vs. NCBI nr
Match: XP_038906896.1 (probable transcriptional regulator SLK2 isoform X2 [Benincasa hispida])

HSP 1 Score: 472.2 bits (1214), Expect = 3.2e-129
Identity = 264/292 (90.41%), Postives = 270/292 (92.47%), Query Frame = 0


Query: 1   MQEIEQVATAQGLPTDRNTLSRMVALHPGLNNQMNSQNHLGSRGTLSGSAQAALALSNYQ 60
           MQEIEQVA AQGLPTD NTL+RMVALHPGLN+Q+NSQN L  RGTLS  AQ ALALSNYQ
Sbjct: 572 MQEIEQVANAQGLPTDHNTLTRMVALHPGLNSQVNSQNQLVGRGTLSSLAQTALALSNYQ 631

Query: 61  NLLMRQNSMNSTSSNPLQQETSSSFNNSNQSPSSSFHGTTAITSAPMQNLPSSGLSSPNP 120
           NLLMRQNSMNSTSSNPLQQE SSSFNNSNQSPSSSFHGTTAITSAPMQNLPSSGLSSPN 
Sbjct: 632 NLLMRQNSMNSTSSNPLQQEPSSSFNNSNQSPSSSFHGTTAITSAPMQNLPSSGLSSPNL 691

Query: 121 LQQQSQVQQQLHQRPNTNNLLVQNHPQSTQGNGNNNQAMQHQMIQQLLQISNNSGGGQQQ 180
            QQQSQVQ QLHQRPNT NL VQNHP STQGN NNNQAM+HQMIQQLLQIS NSGGGQQQ
Sbjct: 692 SQQQSQVQHQLHQRPNT-NLHVQNHPPSTQGNVNNNQAMEHQMIQQLLQISKNSGGGQQQ 751

Query: 181 PLSGSNTKGSIAGTYTGYGGSSSVAAAGTANASGSNTPAPSRSNSFKSASTGDVPAVGAR 240
           PL+GSNTKGSIAGTY GYGGSSSVAAAGTANASGSNTPAPSRSNSFKSASTGDV AVGAR
Sbjct: 752 PLTGSNTKGSIAGTYMGYGGSSSVAAAGTANASGSNTPAPSRSNSFKSASTGDVSAVGAR 811

Query: 241 SSGFNQRTADLPQNLHLDEDIIQDIAHDFTDNGFFSSDLDDNMCFTWKGQLT 293
           SSGFNQRT DLPQNL LDEDIIQDIAHDFTDNGFF+SDLDDNMCF WKGQLT
Sbjct: 812 SSGFNQRTTDLPQNLQLDEDIIQDIAHDFTDNGFFNSDLDDNMCFAWKGQLT 862

[Close]

BLAST of HG10009464 vs. NCBI nr
Match: XP_038906858.1 (probable transcriptional regulator SLK2 isoform X2 [Benincasa hispida])

HSP 1 Score: 464.9 bits (1195), Expect = 5.0e-127
Identity = 263/292 (90.07%), Postives = 265/292 (90.75%), Query Frame = 0


Query: 1   MQEIEQVATAQGLPTDRNTLSRMVALHPGLNNQMNSQNHLGSRGTLSGSAQAALALSNYQ 60
           MQEIEQVA AQGLPTDRNTLSRMVALHPGL NQMNSQN L  RG LS SAQAALALSNYQ
Sbjct: 574 MQEIEQVANAQGLPTDRNTLSRMVALHPGL-NQMNSQNQLVGRGALSDSAQAALALSNYQ 633

Query: 61  NLLMRQNSMNSTSSNPLQQETSSSFNNSNQSPSSSFHGTTAITSAPMQNLPSSGLSSPNP 120
           NLLMRQNSMNSTSSNPLQQE SSSFNNSNQSPSSSFHGTTAITSA MQNLPSSG SSPN 
Sbjct: 634 NLLMRQNSMNSTSSNPLQQEPSSSFNNSNQSPSSSFHGTTAITSATMQNLPSSGFSSPNL 693

Query: 121 LQQQSQVQQQLHQRPNTNNLLVQNHPQSTQGNGNNNQAMQHQMIQQLLQISNNSGGGQQQ 180
            QQQSQVQ QLHQRPNTNNLLVQNHP  TQGN NNNQA QHQMIQQLLQISNNSG GQ+Q
Sbjct: 694 PQQQSQVQHQLHQRPNTNNLLVQNHPPITQGNVNNNQAAQHQMIQQLLQISNNSGRGQRQ 753

Query: 181 PLSGSNTKGSIAGTYTGYGGSSSVAAAGTANASGSNTPAPSRSNSFKSASTGDVPAVGAR 240
           PLSGSNTKGSIAGTYTGY GSS  AA GTANASGSNTP PSRSNSFKSASTGDV AVGA 
Sbjct: 754 PLSGSNTKGSIAGTYTGYRGSSYAAAVGTANASGSNTPTPSRSNSFKSASTGDVSAVGAG 813

Query: 241 SSGFNQRTADLPQNLHLDEDIIQDIAHDFTDNGFFSSDLDDNMCFTWKGQLT 293
           SSGFNQRTA LPQNLHLDEDIIQDIAHDFTDNGFF+SDLDDNMCF WKGQLT
Sbjct: 814 SSGFNQRTAGLPQNLHLDEDIIQDIAHDFTDNGFFNSDLDDNMCFAWKGQLT 864

[Close]

BLAST of HG10009464 vs. NCBI nr
Match: XP_038906857.1 (probable transcriptional regulator SLK2 isoform X1 [Benincasa hispida])

HSP 1 Score: 464.9 bits (1195), Expect = 5.0e-127
Identity = 263/292 (90.07%), Postives = 265/292 (90.75%), Query Frame = 0


Query: 1   MQEIEQVATAQGLPTDRNTLSRMVALHPGLNNQMNSQNHLGSRGTLSGSAQAALALSNYQ 60
           MQEIEQVA AQGLPTDRNTLSRMVALHPGL NQMNSQN L  RG LS SAQAALALSNYQ
Sbjct: 591 MQEIEQVANAQGLPTDRNTLSRMVALHPGL-NQMNSQNQLVGRGALSDSAQAALALSNYQ 650

Query: 61  NLLMRQNSMNSTSSNPLQQETSSSFNNSNQSPSSSFHGTTAITSAPMQNLPSSGLSSPNP 120
           NLLMRQNSMNSTSSNPLQQE SSSFNNSNQSPSSSFHGTTAITSA MQNLPSSG SSPN 
Sbjct: 651 NLLMRQNSMNSTSSNPLQQEPSSSFNNSNQSPSSSFHGTTAITSATMQNLPSSGFSSPNL 710

Query: 121 LQQQSQVQQQLHQRPNTNNLLVQNHPQSTQGNGNNNQAMQHQMIQQLLQISNNSGGGQQQ 180
            QQQSQVQ QLHQRPNTNNLLVQNHP  TQGN NNNQA QHQMIQQLLQISNNSG GQ+Q
Sbjct: 711 PQQQSQVQHQLHQRPNTNNLLVQNHPPITQGNVNNNQAAQHQMIQQLLQISNNSGRGQRQ 770

Query: 181 PLSGSNTKGSIAGTYTGYGGSSSVAAAGTANASGSNTPAPSRSNSFKSASTGDVPAVGAR 240
           PLSGSNTKGSIAGTYTGY GSS  AA GTANASGSNTP PSRSNSFKSASTGDV AVGA 
Sbjct: 771 PLSGSNTKGSIAGTYTGYRGSSYAAAVGTANASGSNTPTPSRSNSFKSASTGDVSAVGAG 830

Query: 241 SSGFNQRTADLPQNLHLDEDIIQDIAHDFTDNGFFSSDLDDNMCFTWKGQLT 293
           SSGFNQRTA LPQNLHLDEDIIQDIAHDFTDNGFF+SDLDDNMCF WKGQLT
Sbjct: 831 SSGFNQRTAGLPQNLHLDEDIIQDIAHDFTDNGFFNSDLDDNMCFAWKGQLT 881

[Close]

BLAST of HG10009464 vs. NCBI nr
Match: XP_038906859.1 (probable transcriptional regulator SLK3 isoform X3 [Benincasa hispida] >XP_038906860.1 probable transcriptional regulator SLK3 isoform X3 [Benincasa hispida])

HSP 1 Score: 464.9 bits (1195), Expect = 5.0e-127
Identity = 263/292 (90.07%), Postives = 265/292 (90.75%), Query Frame = 0


Query: 1   MQEIEQVATAQGLPTDRNTLSRMVALHPGLNNQMNSQNHLGSRGTLSGSAQAALALSNYQ 60
           MQEIEQVA AQGLPTDRNTLSRMVALHPGL NQMNSQN L  RG LS SAQAALALSNYQ
Sbjct: 505 MQEIEQVANAQGLPTDRNTLSRMVALHPGL-NQMNSQNQLVGRGALSDSAQAALALSNYQ 564

Query: 61  NLLMRQNSMNSTSSNPLQQETSSSFNNSNQSPSSSFHGTTAITSAPMQNLPSSGLSSPNP 120
           NLLMRQNSMNSTSSNPLQQE SSSFNNSNQSPSSSFHGTTAITSA MQNLPSSG SSPN 
Sbjct: 565 NLLMRQNSMNSTSSNPLQQEPSSSFNNSNQSPSSSFHGTTAITSATMQNLPSSGFSSPNL 624

Query: 121 LQQQSQVQQQLHQRPNTNNLLVQNHPQSTQGNGNNNQAMQHQMIQQLLQISNNSGGGQQQ 180
            QQQSQVQ QLHQRPNTNNLLVQNHP  TQGN NNNQA QHQMIQQLLQISNNSG GQ+Q
Sbjct: 625 PQQQSQVQHQLHQRPNTNNLLVQNHPPITQGNVNNNQAAQHQMIQQLLQISNNSGRGQRQ 684

Query: 181 PLSGSNTKGSIAGTYTGYGGSSSVAAAGTANASGSNTPAPSRSNSFKSASTGDVPAVGAR 240
           PLSGSNTKGSIAGTYTGY GSS  AA GTANASGSNTP PSRSNSFKSASTGDV AVGA 
Sbjct: 685 PLSGSNTKGSIAGTYTGYRGSSYAAAVGTANASGSNTPTPSRSNSFKSASTGDVSAVGAG 744

Query: 241 SSGFNQRTADLPQNLHLDEDIIQDIAHDFTDNGFFSSDLDDNMCFTWKGQLT 293
           SSGFNQRTA LPQNLHLDEDIIQDIAHDFTDNGFF+SDLDDNMCF WKGQLT
Sbjct: 745 SSGFNQRTAGLPQNLHLDEDIIQDIAHDFTDNGFFNSDLDDNMCFAWKGQLT 795

[Close]

BLAST of HG10009464 vs. ExPASy Swiss-Prot
Match: Q0WVM7 (Probable transcriptional regulator SLK1 OS=Arabidopsis thaliana OX=3702 GN=SLK1 PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.6e-19
Identity = 102/254 (40.16%), Postives = 132/254 (51.97%), Query Frame = 0


Query: 31  NNQMNSQNHLGSRGTLSGSAQAALALSNYQNLLMRQNSMNSTSSNPLQQETSSSFN---N 90
           NN  N+ N +  RG ++GSAQAA AL+NYQ++LMRQN+MN+ +SN  +QE  SS N   N
Sbjct: 536 NNNSNNHNQIVGRGAMNGSAQAAAALTNYQSMLMRQNAMNNPNSNTGKQEGFSSQNPTPN 595

Query: 91  SNQSPSSSFHGTTAITSAPMQNLPSSGLSSPNPLQQQSQVQQQLHQRPNTNNLLVQNHPQ 150
           SNQSPSSS        S    NL + G   PN      Q+QQQ        N+L QNHP 
Sbjct: 596 SNQSPSSS--------SQQRHNLVTGGF--PN----SPQMQQQQRTMNGPTNILPQNHPH 655

Query: 151 STQGNGNNNQAMQHQMIQQLLQISNNSGGG--QQQPLSGSNTKGSIAGTYTGYGGSSSVA 210
             Q   ++    + QM+ QLLQ  + +GG   QQQ  SG +   S A   T         
Sbjct: 656 QLQSPHSHGNTPEQQMLHQLLQEMSENGGSVQQQQAFSGQSGSNSNAERNT--------- 715

Query: 211 AAGTANASGSNTPAPSRSNSFKSASTGDVPAVGARSSGFNQRTADLPQNLHLDEDI-IQD 270
            A T+N SG    APSR+NSFK+AS                       NLH  EDI I D
Sbjct: 716 TASTSNISGGGR-APSRNNSFKAASN---------------------NNLHFSEDISITD 742

Query: 271 IAHDFTDNGFFSSD 279
             HDF+++GFF+++
Sbjct: 776 --HDFSEDGFFNNN 742

[Close]

BLAST of HG10009464 vs. ExPASy Swiss-Prot
Match: Q94BP0 (Probable transcriptional regulator SLK2 OS=Arabidopsis thaliana OX=3702 GN=SLK2 PE=1 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.6e-17
Identity = 106/298 (35.57%), Postives = 154/298 (51.68%), Query Frame = 0


Query: 1   MQEIEQVATAQGLPTDRNTLSRMVAL-HPGLNNQMNSQNHLGSRGTLSGSAQ-AALALSN 60
           MQE+EQ+A A+GLP DRN+L++++AL + G+N  M   N++  +G+L GSAQ AA AL+N
Sbjct: 568 MQEMEQLAAARGLPPDRNSLNKLMALRNSGINIPM---NNMSGQGSLPGSAQAAAFALTN 627

Query: 61  YQNLLMRQNSMNSTSSN-PLQQETSSSFNNSNQSPSSSFHGTTAITSAPMQNLPSSGLSS 120
           YQ++LM+QN +NS  +N  +QQE S      N+S S S+ GT+ +    + +   SG+SS
Sbjct: 628 YQSMLMKQNHLNSDLNNTTIQQEPS-----RNRSASPSYQGTSPLLPGFVHSPSISGVSS 687

Query: 121 PNPLQQQ------SQVQQQLHQRPNTNNLLVQNHPQSTQGNGNNNQAMQHQMIQQLLQIS 180
               Q+Q      +   QQ HQ+P          P  + GN    Q M HQ+ QQ+   S
Sbjct: 688 HLSPQRQMPSSSYNGSTQQYHQQP----------PSCSSGNQTLEQQMIHQIWQQMAN-S 747

Query: 181 NNSGGGQQQPLSGSNTKGSIAGTYTGYGGSSSVAAAGTANASGSNTPAPSRSNSFKSAST 240
           N   G QQQ LSG N       T  G   +  V AA            PS SN F+    
Sbjct: 748 NGGSGQQQQSLSGQNMMN--CNTNMGRNRTDYVPAA---------AETPSTSNRFRGI-- 807

Query: 241 GDVPAVGARSSGFNQRTADLPQNLHLDEDIIQDIAHDFTDNGFFSSDLDDNM-CFTWK 289
                          +  D  QNL   E II + + +F +NG FS+++D++M  ++WK
Sbjct: 808 ---------------KGLDQSQNL---EGIISNTSLNFGNNGVFSNEVDESMGGYSWK 815

[Close]

BLAST of HG10009464 vs. ExPASy Swiss-Prot
Match: F4JT98 (Probable transcriptional regulator SLK3 OS=Arabidopsis thaliana OX=3702 GN=SLK3 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.9e-16
Identity = 99/284 (34.86%), Postives = 136/284 (47.89%), Query Frame = 0


Query: 1   MQEIEQVATA---QGLPTDRNTLSRMVALHPGLNNQMNSQNHLGSRGTLSGSAQAALALS 60
           MQE+EQ   +    G    + TLS         NN  N+ + +  RG ++GS QA  AL+
Sbjct: 440 MQEMEQFGNSGAMSGPAQAQMTLSSGTMSGSTANNNSNNHHQIVGRGAMNGSPQATAALT 499

Query: 61  NYQNLLMRQNSMNSTSSNPLQQETSSSFN---NSNQSPSSSFHGTTAITSAPMQNLPSSG 120
           NYQ++L+RQN+MN+ +SN   QE  SS N   NSNQSPSSS        S   +NL +SG
Sbjct: 500 NYQSMLIRQNAMNNQNSNTGNQEGFSSQNPTLNSNQSPSSS--------SQQRENLATSG 559

Query: 121 LSSPNPLQQQSQVQQQLHQRPNTNNLLVQNHPQSTQGNGNNNQAMQHQMIQQLLQISNNS 180
             S        Q+QQQ H    T N+L QNHP   Q   ++    + QM+ QLLQ    +
Sbjct: 560 FPS------SPQMQQQQHILNGTPNMLPQNHPHQLQSPHSHGNTQEQQMLHQLLQEMTEN 619

Query: 181 GGGQQQPLSGSNTKGSIAGTYTGYGGSSSVAAAGTANASGSNTPAPSRSNSFKSASTGDV 240
           G   +Q  +     GS   T            A T+N SG     PSR NSFK++S  ++
Sbjct: 620 GASVEQQQAFPGQSGSNNNTERN-------TTASTSNISGGGR-VPSRINSFKASSNNNL 678

Query: 241 PAVGARSSGFNQRTADLPQNLHLDEDI-IQDIAHDFTDNGFFSS 278
           P                       EDI + D  HDF+++GFF++
Sbjct: 680 P---------------------FSEDISVTD--HDFSEDGFFNN 678

[Close]

BLAST of HG10009464 vs. ExPASy TrEMBL
Match: A0A0A0KLE3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G173550 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 4.2e-119
Identity = 255/299 (85.28%), Postives = 265/299 (88.63%), Query Frame = 0


Query: 1   MQEIEQVATAQGLPTDRNTLSRMVALHPGLNNQMNSQNHLGSRGTLSGSAQAALALSNYQ 60
           MQEIEQVA AQGLPTDR+TL RMV+LHPGLNNQMNSQN L SRGTLSGSAQAALALSNYQ
Sbjct: 570 MQEIEQVANAQGLPTDRSTLGRMVSLHPGLNNQMNSQNQLASRGTLSGSAQAALALSNYQ 629

Query: 61  NLLMRQNSMNSTSSNPLQQETSSSFNNSNQSPSSSFHGTTAITSAPMQNLPSSGLSSPNP 120
           NLLMRQNSMNSTSS+ LQQETSSSFN +NQSPSSSFHGTTAITSAPMQNLPSSGLSSPN 
Sbjct: 630 NLLMRQNSMNSTSSHALQQETSSSFNTTNQSPSSSFHGTTAITSAPMQNLPSSGLSSPNL 689

Query: 121 LQQQSQVQQQLHQRPNTNNLLVQNHPQSTQGNGNNNQAMQHQMIQQLLQISNNSGGG--- 180
            QQQSQVQ QLHQRPNTNNLL+     STQGN NNNQAMQHQMIQQLLQISNNSGGG   
Sbjct: 690 PQQQSQVQHQLHQRPNTNNLLM----HSTQGNTNNNQAMQHQMIQQLLQISNNSGGGQPQ 749

Query: 181 -----QQQPLSGSNTKGSIAGTYTGYGGS-SSVAAAGTANASGSNTPAPSRSNSFKSAST 240
                QQQPLSGSNTK S+AGTYTGYG S SSV AAGTANAS SNTPAPSRSNSFKSAST
Sbjct: 750 QQPQPQQQPLSGSNTKVSVAGTYTGYGASNSSVTAAGTANASCSNTPAPSRSNSFKSAST 809

Query: 241 GDVPAVGARS-SGFNQRTADLPQNLHLDEDIIQDIAHDFTDNGFFSSDLDDNMCFTWKG 290
           GDV A GARS SGFNQR+ADLPQNL LD+DIIQDIAHDFTDNGFF++DLDDNMC  WKG
Sbjct: 810 GDVSAAGARSGSGFNQRSADLPQNLQLDDDIIQDIAHDFTDNGFFNNDLDDNMCLIWKG 864

[Close]

BLAST of HG10009464 vs. ExPASy TrEMBL
Match: A0A1S3CT09 (probable transcriptional regulator SLK2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504621 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 4.2e-119
Identity = 257/298 (86.24%), Postives = 266/298 (89.26%), Query Frame = 0


Query: 1   MQEIEQVATAQGLPTDRNTLSRMVALHPGLNNQMNSQNHLGSRGTLSGSAQAALALSNYQ 60
           MQEIEQVA AQG+PTDRNTLSRMV+LHPGLNNQM+SQN L  RGTLSGSAQAALALSNYQ
Sbjct: 571 MQEIEQVANAQGMPTDRNTLSRMVSLHPGLNNQMSSQNQLVGRGTLSGSAQAALALSNYQ 630

Query: 61  NLLMRQNSMNSTSSNPLQQETSSSFNNSNQSPSSSFHGTTAITSAPMQNLPSSGLSSPNP 120
           NLLMRQNSMNSTSS+ LQQETSSSFN SNQSPSSSFHGTTAITSAPMQNLPSSGLSSPN 
Sbjct: 631 NLLMRQNSMNSTSSHALQQETSSSFNTSNQSPSSSFHGTTAITSAPMQNLPSSGLSSPNL 690

Query: 121 LQQQSQVQQQLHQRPNTNNLLVQNHPQSTQGNGNNNQAMQHQMIQQLLQISNNSGGG--- 180
            QQQSQVQ QLHQRPNTNNLL     QSTQGN NNNQAMQHQMIQQLLQISNNSGGG   
Sbjct: 691 PQQQSQVQHQLHQRPNTNNLL----GQSTQGNSNNNQAMQHQMIQQLLQISNNSGGGQQQ 750

Query: 181 ---QQQPLSGSNTKGSIAGTYTGYG-GSSSVAAAGTANASGSNTPAPSRSNSFKSASTGD 240
              QQQPLSGSNTK S+ GTYTGYG GSSSV AAGTANAS SNTPAPSRSNSFKSASTGD
Sbjct: 751 LQPQQQPLSGSNTKVSVGGTYTGYGAGSSSVTAAGTANASCSNTPAPSRSNSFKSASTGD 810

Query: 241 V-PAVGAR-SSGFNQRTADLPQNLHLDEDIIQDIAHDFTDNGFFSSDLDDNMCFTWKG 290
           V  A GAR SSGFNQR+ADLPQNL LD+DIIQDIAHDFTDNGFF++DLDDNMCF WKG
Sbjct: 811 VSAAAGARSSSGFNQRSADLPQNLQLDDDIIQDIAHDFTDNGFFNNDLDDNMCFAWKG 864

[Close]

BLAST of HG10009464 vs. ExPASy TrEMBL
Match: A0A6J1ESN5 (probable transcriptional regulator SLK2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435635 PE=4 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 2.1e-118
Identity = 248/296 (83.78%), Postives = 268/296 (90.54%), Query Frame = 0


Query: 1   MQEIEQVATAQGLPTDRNTLSRMVALHPGLNNQMNSQNHLGSRGTLSGSAQAALALSNYQ 60
           MQEIEQVATAQGLPTDRNTLSRMVALHPGL+NQMNSQN L  RG LSGSAQAALALS+YQ
Sbjct: 573 MQEIEQVATAQGLPTDRNTLSRMVALHPGLDNQMNSQNQLIGRGALSGSAQAALALSSYQ 632

Query: 61  NLLMRQNSMNSTSSNPLQQETSSSFNNSNQSPSSSFHGTTAITSAPMQNLPSSGLSSPN- 120
           NLLMRQ SMNSTSSNPLQQET+S  N+++QSPSSSFHGTTA++SAPMQ+LP SGLSSPN 
Sbjct: 633 NLLMRQCSMNSTSSNPLQQETTSFNNSNHQSPSSSFHGTTALSSAPMQSLPGSGLSSPNL 692

Query: 121 --PLQ-QQSQVQQQLHQRPNTNNLLVQNHPQSTQGNGNNNQAMQHQMIQQLLQISNNSGG 180
             P Q QQSQVQQQLHQRPN NNLLVQNHPQ+TQGN NNNQAMQHQMIQQLLQISNNSGG
Sbjct: 693 PPPQQSQQSQVQQQLHQRPNANNLLVQNHPQTTQGNSNNNQAMQHQMIQQLLQISNNSGG 752

Query: 181 GQQQPLSGSNTK--GSIAGTYTGYGGSSSVAAAGTANASGSNTPAPSRSNSFKSASTGDV 240
           GQQ+PL GSN K  GS+ GTYTG+GGSSSV A G+ANASGSNTPAP+RS+SFK+AS GDV
Sbjct: 753 GQQRPLPGSNVKGGGSMTGTYTGFGGSSSVVATGSANASGSNTPAPTRSSSFKNASAGDV 812

Query: 241 -PAVGARSSGFNQRTADLPQNLHLDEDIIQDIAHDFTDNGFFSSDLDDNMCFTWKG 290
             A G+RSS FNQRTADLPQNLHLDEDIIQDIAHDFT+NGFF+SDLDDNMCF WKG
Sbjct: 813 SAAAGSRSSEFNQRTADLPQNLHLDEDIIQDIAHDFTENGFFNSDLDDNMCFAWKG 868

[Close]

BLAST of HG10009464 vs. ExPASy TrEMBL
Match: A0A6J1EQ89 (probable transcriptional regulator SLK3 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111435635 PE=4 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 2.1e-118
Identity = 248/296 (83.78%), Postives = 268/296 (90.54%), Query Frame = 0


Query: 1   MQEIEQVATAQGLPTDRNTLSRMVALHPGLNNQMNSQNHLGSRGTLSGSAQAALALSNYQ 60
           MQEIEQVATAQGLPTDRNTLSRMVALHPGL+NQMNSQN L  RG LSGSAQAALALS+YQ
Sbjct: 473 MQEIEQVATAQGLPTDRNTLSRMVALHPGLDNQMNSQNQLIGRGALSGSAQAALALSSYQ 532

Query: 61  NLLMRQNSMNSTSSNPLQQETSSSFNNSNQSPSSSFHGTTAITSAPMQNLPSSGLSSPN- 120
           NLLMRQ SMNSTSSNPLQQET+S  N+++QSPSSSFHGTTA++SAPMQ+LP SGLSSPN 
Sbjct: 533 NLLMRQCSMNSTSSNPLQQETTSFNNSNHQSPSSSFHGTTALSSAPMQSLPGSGLSSPNL 592

Query: 121 --PLQ-QQSQVQQQLHQRPNTNNLLVQNHPQSTQGNGNNNQAMQHQMIQQLLQISNNSGG 180
             P Q QQSQVQQQLHQRPN NNLLVQNHPQ+TQGN NNNQAMQHQMIQQLLQISNNSGG
Sbjct: 593 PPPQQSQQSQVQQQLHQRPNANNLLVQNHPQTTQGNSNNNQAMQHQMIQQLLQISNNSGG 652

Query: 181 GQQQPLSGSNTK--GSIAGTYTGYGGSSSVAAAGTANASGSNTPAPSRSNSFKSASTGDV 240
           GQQ+PL GSN K  GS+ GTYTG+GGSSSV A G+ANASGSNTPAP+RS+SFK+AS GDV
Sbjct: 653 GQQRPLPGSNVKGGGSMTGTYTGFGGSSSVVATGSANASGSNTPAPTRSSSFKNASAGDV 712

Query: 241 -PAVGARSSGFNQRTADLPQNLHLDEDIIQDIAHDFTDNGFFSSDLDDNMCFTWKG 290
             A G+RSS FNQRTADLPQNLHLDEDIIQDIAHDFT+NGFF+SDLDDNMCF WKG
Sbjct: 713 SAAAGSRSSEFNQRTADLPQNLHLDEDIIQDIAHDFTENGFFNSDLDDNMCFAWKG 768

[Close]

BLAST of HG10009464 vs. ExPASy TrEMBL
Match: A0A6J1EM05 (probable transcriptional regulator SLK2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435635 PE=4 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 2.1e-118
Identity = 248/296 (83.78%), Postives = 268/296 (90.54%), Query Frame = 0


Query: 1   MQEIEQVATAQGLPTDRNTLSRMVALHPGLNNQMNSQNHLGSRGTLSGSAQAALALSNYQ 60
           MQEIEQVATAQGLPTDRNTLSRMVALHPGL+NQMNSQN L  RG LSGSAQAALALS+YQ
Sbjct: 578 MQEIEQVATAQGLPTDRNTLSRMVALHPGLDNQMNSQNQLIGRGALSGSAQAALALSSYQ 637

Query: 61  NLLMRQNSMNSTSSNPLQQETSSSFNNSNQSPSSSFHGTTAITSAPMQNLPSSGLSSPN- 120
           NLLMRQ SMNSTSSNPLQQET+S  N+++QSPSSSFHGTTA++SAPMQ+LP SGLSSPN 
Sbjct: 638 NLLMRQCSMNSTSSNPLQQETTSFNNSNHQSPSSSFHGTTALSSAPMQSLPGSGLSSPNL 697

Query: 121 --PLQ-QQSQVQQQLHQRPNTNNLLVQNHPQSTQGNGNNNQAMQHQMIQQLLQISNNSGG 180
             P Q QQSQVQQQLHQRPN NNLLVQNHPQ+TQGN NNNQAMQHQMIQQLLQISNNSGG
Sbjct: 698 PPPQQSQQSQVQQQLHQRPNANNLLVQNHPQTTQGNSNNNQAMQHQMIQQLLQISNNSGG 757

Query: 181 GQQQPLSGSNTK--GSIAGTYTGYGGSSSVAAAGTANASGSNTPAPSRSNSFKSASTGDV 240
           GQQ+PL GSN K  GS+ GTYTG+GGSSSV A G+ANASGSNTPAP+RS+SFK+AS GDV
Sbjct: 758 GQQRPLPGSNVKGGGSMTGTYTGFGGSSSVVATGSANASGSNTPAPTRSSSFKNASAGDV 817

Query: 241 -PAVGARSSGFNQRTADLPQNLHLDEDIIQDIAHDFTDNGFFSSDLDDNMCFTWKG 290
             A G+RSS FNQRTADLPQNLHLDEDIIQDIAHDFT+NGFF+SDLDDNMCF WKG
Sbjct: 818 SAAAGSRSSEFNQRTADLPQNLHLDEDIIQDIAHDFTENGFFNSDLDDNMCFAWKG 873

[Close]

BLAST of HG10009464 vs. TAIR 10
Match: AT4G25520.1 (SEUSS-like 1 )

HSP 1 Score: 98.2 bits (243), Expect = 1.2e-20
Identity = 102/254 (40.16%), Postives = 132/254 (51.97%), Query Frame = 0


Query: 31  NNQMNSQNHLGSRGTLSGSAQAALALSNYQNLLMRQNSMNSTSSNPLQQETSSSFN---N 90
           NN  N+ N +  RG ++GSAQAA AL+NYQ++LMRQN+MN+ +SN  +QE  SS N   N
Sbjct: 536 NNNSNNHNQIVGRGAMNGSAQAAAALTNYQSMLMRQNAMNNPNSNTGKQEGFSSQNPTPN 595

Query: 91  SNQSPSSSFHGTTAITSAPMQNLPSSGLSSPNPLQQQSQVQQQLHQRPNTNNLLVQNHPQ 150
           SNQSPSSS        S    NL + G   PN      Q+QQQ        N+L QNHP 
Sbjct: 596 SNQSPSSS--------SQQRHNLVTGGF--PN----SPQMQQQQRTMNGPTNILPQNHPH 655

Query: 151 STQGNGNNNQAMQHQMIQQLLQISNNSGGG--QQQPLSGSNTKGSIAGTYTGYGGSSSVA 210
             Q   ++    + QM+ QLLQ  + +GG   QQQ  SG +   S A   T         
Sbjct: 656 QLQSPHSHGNTPEQQMLHQLLQEMSENGGSVQQQQAFSGQSGSNSNAERNT--------- 715

Query: 211 AAGTANASGSNTPAPSRSNSFKSASTGDVPAVGARSSGFNQRTADLPQNLHLDEDI-IQD 270
            A T+N SG    APSR+NSFK+AS                       NLH  EDI I D
Sbjct: 716 TASTSNISGGGR-APSRNNSFKAASN---------------------NNLHFSEDISITD 742

Query: 271 IAHDFTDNGFFSSD 279
             HDF+++GFF+++
Sbjct: 776 --HDFSEDGFFNNN 742

[Close]

BLAST of HG10009464 vs. TAIR 10
Match: AT5G62090.1 (SEUSS-like 2 )

HSP 1 Score: 90.9 bits (224), Expect = 1.8e-18
Identity = 106/298 (35.57%), Postives = 154/298 (51.68%), Query Frame = 0


Query: 1   MQEIEQVATAQGLPTDRNTLSRMVAL-HPGLNNQMNSQNHLGSRGTLSGSAQ-AALALSN 60
           MQE+EQ+A A+GLP DRN+L++++AL + G+N  M   N++  +G+L GSAQ AA AL+N
Sbjct: 568 MQEMEQLAAARGLPPDRNSLNKLMALRNSGINIPM---NNMSGQGSLPGSAQAAAFALTN 627

Query: 61  YQNLLMRQNSMNSTSSN-PLQQETSSSFNNSNQSPSSSFHGTTAITSAPMQNLPSSGLSS 120
           YQ++LM+QN +NS  +N  +QQE S      N+S S S+ GT+ +    + +   SG+SS
Sbjct: 628 YQSMLMKQNHLNSDLNNTTIQQEPS-----RNRSASPSYQGTSPLLPGFVHSPSISGVSS 687

Query: 121 PNPLQQQ------SQVQQQLHQRPNTNNLLVQNHPQSTQGNGNNNQAMQHQMIQQLLQIS 180
               Q+Q      +   QQ HQ+P          P  + GN    Q M HQ+ QQ+   S
Sbjct: 688 HLSPQRQMPSSSYNGSTQQYHQQP----------PSCSSGNQTLEQQMIHQIWQQMAN-S 747

Query: 181 NNSGGGQQQPLSGSNTKGSIAGTYTGYGGSSSVAAAGTANASGSNTPAPSRSNSFKSAST 240
           N   G QQQ LSG N       T  G   +  V AA            PS SN F+    
Sbjct: 748 NGGSGQQQQSLSGQNMMN--CNTNMGRNRTDYVPAA---------AETPSTSNRFRGI-- 807

Query: 241 GDVPAVGARSSGFNQRTADLPQNLHLDEDIIQDIAHDFTDNGFFSSDLDDNM-CFTWK 289
                          +  D  QNL   E II + + +F +NG FS+++D++M  ++WK
Sbjct: 808 ---------------KGLDQSQNL---EGIISNTSLNFGNNGVFSNEVDESMGGYSWK 815

[Close]

BLAST of HG10009464 vs. TAIR 10
Match: AT5G62090.2 (SEUSS-like 2 )

HSP 1 Score: 90.9 bits (224), Expect = 1.8e-18
Identity = 106/298 (35.57%), Postives = 154/298 (51.68%), Query Frame = 0


Query: 1   MQEIEQVATAQGLPTDRNTLSRMVAL-HPGLNNQMNSQNHLGSRGTLSGSAQ-AALALSN 60
           MQE+EQ+A A+GLP DRN+L++++AL + G+N  M   N++  +G+L GSAQ AA AL+N
Sbjct: 568 MQEMEQLAAARGLPPDRNSLNKLMALRNSGINIPM---NNMSGQGSLPGSAQAAAFALTN 627

Query: 61  YQNLLMRQNSMNSTSSN-PLQQETSSSFNNSNQSPSSSFHGTTAITSAPMQNLPSSGLSS 120
           YQ++LM+QN +NS  +N  +QQE S      N+S S S+ GT+ +    + +   SG+SS
Sbjct: 628 YQSMLMKQNHLNSDLNNTTIQQEPS-----RNRSASPSYQGTSPLLPGFVHSPSISGVSS 687

Query: 121 PNPLQQQ------SQVQQQLHQRPNTNNLLVQNHPQSTQGNGNNNQAMQHQMIQQLLQIS 180
               Q+Q      +   QQ HQ+P          P  + GN    Q M HQ+ QQ+   S
Sbjct: 688 HLSPQRQMPSSSYNGSTQQYHQQP----------PSCSSGNQTLEQQMIHQIWQQMAN-S 747

Query: 181 NNSGGGQQQPLSGSNTKGSIAGTYTGYGGSSSVAAAGTANASGSNTPAPSRSNSFKSAST 240
           N   G QQQ LSG N       T  G   +  V AA            PS SN F+    
Sbjct: 748 NGGSGQQQQSLSGQNMMN--CNTNMGRNRTDYVPAA---------AETPSTSNRFRGI-- 807

Query: 241 GDVPAVGARSSGFNQRTADLPQNLHLDEDIIQDIAHDFTDNGFFSSDLDDNM-CFTWK 289
                          +  D  QNL   E II + + +F +NG FS+++D++M  ++WK
Sbjct: 808 ---------------KGLDQSQNL---EGIISNTSLNFGNNGVFSNEVDESMGGYSWK 815

[Close]

BLAST of HG10009464 vs. TAIR 10
Match: AT4G25515.1 (SEUSS-like 3 )

HSP 1 Score: 86.7 bits (213), Expect = 3.5e-17
Identity = 99/284 (34.86%), Postives = 136/284 (47.89%), Query Frame = 0


Query: 1   MQEIEQVATA---QGLPTDRNTLSRMVALHPGLNNQMNSQNHLGSRGTLSGSAQAALALS 60
           MQE+EQ   +    G    + TLS         NN  N+ + +  RG ++GS QA  AL+
Sbjct: 440 MQEMEQFGNSGAMSGPAQAQMTLSSGTMSGSTANNNSNNHHQIVGRGAMNGSPQATAALT 499

Query: 61  NYQNLLMRQNSMNSTSSNPLQQETSSSFN---NSNQSPSSSFHGTTAITSAPMQNLPSSG 120
           NYQ++L+RQN+MN+ +SN   QE  SS N   NSNQSPSSS        S   +NL +SG
Sbjct: 500 NYQSMLIRQNAMNNQNSNTGNQEGFSSQNPTLNSNQSPSSS--------SQQRENLATSG 559

Query: 121 LSSPNPLQQQSQVQQQLHQRPNTNNLLVQNHPQSTQGNGNNNQAMQHQMIQQLLQISNNS 180
             S        Q+QQQ H    T N+L QNHP   Q   ++    + QM+ QLLQ    +
Sbjct: 560 FPS------SPQMQQQQHILNGTPNMLPQNHPHQLQSPHSHGNTQEQQMLHQLLQEMTEN 619

Query: 181 GGGQQQPLSGSNTKGSIAGTYTGYGGSSSVAAAGTANASGSNTPAPSRSNSFKSASTGDV 240
           G   +Q  +     GS   T            A T+N SG     PSR NSFK++S  ++
Sbjct: 620 GASVEQQQAFPGQSGSNNNTERN-------TTASTSNISGGGR-VPSRINSFKASSNNNL 678

Query: 241 PAVGARSSGFNQRTADLPQNLHLDEDI-IQDIAHDFTDNGFFSS 278
           P                       EDI + D  HDF+++GFF++
Sbjct: 680 P---------------------FSEDISVTD--HDFSEDGFFNN 678

The following BLAST results are available for this feature:

BLAST of HG10009464 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906895.1	3.2e-129	90.41	probable transcriptional regulator SLK2 isoform X1 [Benincasa hispida]	[more]
XP_038906896.1	3.2e-129	90.41	probable transcriptional regulator SLK2 isoform X2 [Benincasa hispida]	[more]
XP_038906858.1	5.0e-127	90.07	probable transcriptional regulator SLK2 isoform X2 [Benincasa hispida]	[more]
XP_038906857.1	5.0e-127	90.07	probable transcriptional regulator SLK2 isoform X1 [Benincasa hispida]	[more]
XP_038906859.1	5.0e-127	90.07	probable transcriptional regulator SLK3 isoform X3 [Benincasa hispida] >XP_03890...	[more]

BLAST of HG10009464 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WVM7	1.6e-19	40.16	Probable transcriptional regulator SLK1 OS=Arabidopsis thaliana OX=3702 GN=SLK1 ...	[more]
Q94BP0	2.6e-17	35.57	Probable transcriptional regulator SLK2 OS=Arabidopsis thaliana OX=3702 GN=SLK2 ...	[more]
F4JT98	4.9e-16	34.86	Probable transcriptional regulator SLK3 OS=Arabidopsis thaliana OX=3702 GN=SLK3 ...	[more]

BLAST of HG10009464 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLE3	4.2e-119	85.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G173550 PE=4 SV=1	[more]
A0A1S3CT09	4.2e-119	86.24	probable transcriptional regulator SLK2 isoform X2 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A6J1ESN5	2.1e-118	83.78	probable transcriptional regulator SLK2 isoform X2 OS=Cucurbita moschata OX=3662...	[more]
A0A6J1EQ89	2.1e-118	83.78	probable transcriptional regulator SLK3 isoform X3 OS=Cucurbita moschata OX=3662...	[more]
A0A6J1EM05	2.1e-118	83.78	probable transcriptional regulator SLK2 isoform X1 OS=Cucurbita moschata OX=3662...	[more]

BLAST of HG10009464 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25520.1	1.2e-20	40.16	SEUSS-like 1	[more]
AT5G62090.1	1.8e-18	35.57	SEUSS-like 2	[more]
AT5G62090.2	1.8e-18	35.57	SEUSS-like 2	[more]
AT4G25515.1	3.5e-17	34.86	SEUSS-like 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..231
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..133
None	No IPR available	PANTHER	PTHR10378:SF34	LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED	coord: 6..289
IPR029005	LIM-domain binding protein/SEUSS	PANTHER	PTHR10378	LIM DOMAIN-BINDING PROTEIN	coord: 6..289

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10009464.1	HG10009464.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000122	negative regulation of transcription by RNA polymerase II
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription regulator complex