HG10009443 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10009443
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	protein BOLA4, chloroplastic/mitochondrial
Location	Chr06: 6012770 .. 6018499 (-)
RNA-Seq Expression	HG10009443
Synteny	HG10009443

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGATGATTAAGGCTCCTCATGTGGCGTTCCGTCGGGTTCTTCCATTGTTTGTTCACCGCAACCAACCATTTTCGGTTGTCTCCCGCCAAATCACTTCCAACTCTGTCTGCACCGCCGCCGTTGTCGCCGCAATTACCTCCACATCCACCACCGGCGTCCGTAGTAAGAGCAGTAATGTTCCGAAATATAGCCGTGCTAATGGAACATTCCCGAAATGGGGTTCGAGTCGGAACTTGAGCATTAGAGCCACTCAAGTGAATGATTCTGGATCTATTGATTCCCCTCTCATGCAGTCAATGGAGAACAAGGTAATTTTTGTTTAGTTCTTGGTTTCTTCATGGTTTTAGATTTATACTTTTCTACGTTTTCATTTATGTGAGCAAACCAGTGCGTATGCTCTTTGAGGGAAACTAGGGCAAGTTACTGAGCTGATTTAAGAGGAATGGAATCTCCCAGTCGATTCTAGTTCAGAAATGTTCTTAGTAGCCAGTGATAACGACCTTAACGCCGATTTTATGTGATGATTTTTGCTTATCTTTTGTTTTCATTTTAACATGTTATCAAACTTATGATTTTCAGTTTCTTTTCTGCAAATGCGTATTTGTTTGTAAGACGGATGTAGTTTGTGTTTCTCGCTTCAATATATTATCCACCAAGTTGTTTAGTTCTAAGCGGAGCCATGTTATTAGAAGGGCTACGAGCACAGCTAGTTGACTTATTCATCCCGAGGTCACCTGTGCCGAAAGTGGCATATGTAGAAATTGATGGCATACTTGATCAAAAATCAATTTATTCTCCAAAGAAAAGGATATGTCCTTCAACGAAATACAGATAGATTTATACACTCAACCAATCGCTACTACAGTTTAGCTAGCTAATAGGAAAACCAACATCTGCTAGGAGTATAAGTAACCAGAAATTCCAGCACGTGAGCGCTGCTGTACATCTGCAGAGCCAATGGTGGCTGGTGGTTCCAAAGGTTTTGGTAGAGCATGTTCCAATCTCGCCGTTTTTGGTTCTCATACCGGCTTGAGGTGGCCGTGGACAACGGAAACAACCGGCATCGCTGAGGTGGTAGTGGTGGTATAAGTAGTGGGATTATTGGATGATGATTGTGAGAACAAATCCATGAAACAAAACAGAACAGAAAATTTAAAAGATCGAGGAAAGCAAAAAAAAGGAAGAGAAATAGAGAAATCTTTTGAAAGATTGAAGCTTTTTGTTATGGGTGGAAGAAAGATCTCATCTTTTAGGGTTTTCAAGAGAACCCACAATTTCTTTGTACTAGGAGGGAGGTAGAAAATCAAGTAGTGATTCAAAATGAAGATCAAATAAAGAGAATAAATCTTGGCGCTGCTTTGTTTCTGGGTCCGGTCTGCTTTATATGTTTCTTATCTTTTAGTAATTGGCTTGTACATTTTTATCTCCTTCCCTTGGTCTCCTTTGGATATATCTTTCATTTTTTGGGTTCTGCTTTTGTATGTATTTGGGTGTTCTCCCTTTTGGGTTTATCCCCTCTGTACTCAATGGAAATTTCATTCATCAATGAAATGTTTCTAACTTGAAAAAAAAAAAAAAAAGAGAAGAAATAAGAAGTGGGTTTAATTTGCATGCCATGAAGAGATCAAGAAGAACAATGTGAAGGAGGAGATCATAAAGGGCTTGACATCATTGATAATATTGAAAATGATCATTTTTTAGAAAAACCAAAAAAAGGGTTGTTTTTGTTTTTGTGTTTCTTTAGAAGAAGAGAAATGGAAGAAGGAAGAAGAAGAGAAGGAAAAAAGGTCATGAGTTTATGGTATGATTTGTGAAGAAGGGAAATGGGGAAATTATTAGTGATTAGAGAGAGAGCATAGGATTTTCTTTTCCGGAGAAAGAAGAAATATGCATAAAAAAAAAAAAGAAACAAAGAAAACAATAGTAAACATGCATAAAGTTAAACACTTTTGGCAAAATGGTTATGACATTTTCTCCTTCAGATTGAATTTTTATGACATAGGATCATTGTTAGTAAGCATGGCCATCATCTGTTTGAGTGGTCCTTGAGTGGGGTCAGAGGTACATTTCGGAATCCGTGGAAGGATATTTCTCAAGAGCTCCCCTCCTTTTCCCATCTTGTTCGTTGTGAGGTGGGGGAAGGTAAGGAAATGTATCTTTGGAAAGATTAGTGGATGGGGGATAAACCCATCCGCTCCTCGTTTCCTTGTCCATATCATTTCTCTTCCTATAAAAATCATTTGATCTCTAATCTATCGGTCTGGTCGGGGAGCTCGGTTTCTTTCTCGTTTGGGTTATGTCGTTCCTTGATTGATAAGGAAAGACAAATGTTGCCTCTCTTCTGTCCTTGGTAGGGGAGGTTAATTTTAGGTTTGGGAGAAGAAATATTCGCGTTTGGAGTCTTGATGCCATAGGGGGTTTCTCTTGTAAGTCCTTTTTTCGGCATTTATTGGATCCTTCTCCCATTAGCGATTTTGTCTTTGACTTCTTATGGAGGATTTATTGGATGCCATAGGGGGTTTCTCTTGAAAGTCCTTTTTTCGAGTTCCTCTTGTCCCAAATTTTCCAAAGAATAGCTCAAATTATGCTAGCCCATAGATGCCCTTTCGTTTCCTTGAAAGGGTGATCAATGATTACATTCTGACCCGTAATATGGTGTCCAAAGGGGCAGCAATATGCCAACCAAAAACAGAGAAGACGACAGCCCAGATTTTCAGAGTAAAGGGACAATGGAAGAAGACATGATGCTGTGTTTTATCACTCTTTTTGCAAAGCCAGCACCATGATGGTGATAATTGGAGCCAAGGACATCTTTTTTGGAGCCTATCCATTGTGGCAAGAATGGACAATTTCCAATAGAAGAAACTTTACTCTTTTAGGGCAAGGGAACTTCCACAATGAGATGAAGAGGTTTTTCAATGGAGATTCATTGCCTGTTGCAAGGTGAGAAATAAGAGATTTGACAGAAAAATACCACTGTTATCCAATTTCCAGACCCAAATATCCTCCTTCTGCATAAGATGGATGGAGGGTATAAGATGGGTGAGAGCAGCCCATTCAACAATTTCTTCCTCCTTAAGGTTTCTTCTGAAATTCAAGGTCCATGAGGAGCTTTCAAGACACCAAACCTCAGAGATGGAGGCCTTTTTGGATTCAGTAATGGCAAATAATTTTAGAAAGCACTTGTAGAGAGAGCTTCCATTCCAATCCAATGGTCCAAGCCAAAAGGAGGTAGAAAGGCCATTTCCAACGGAGCACCAAACATTGTTGTGAATGGAGTCCATCTGTTTGCTAATGTATAGCCAAGGGCTACATGAAGTAACATGGAACTTCTTTTATGGCTTTTGGTCAAAATGTCTGGAGCCAAATTTAGCTTTGATTAATTTCCTCCATAAGGCACTTTTTTCTTGTCTATAACGCCAAATCCATTTGGTGAGCAAGGCTCTATTCCTCAATCGAATGTCCACAATACTAGGACCGCCTTCATCCAAGGGATGTTTAATTCTATCCCCCATCAAAGAAGATGAGCTGTTTTTTTTGTCTCTATTACCAGCTCGAAGAAAATTTCTAAAGCTTCTCTCAATTTGTTCAATCACAGTAGAAGGAGCTTGATAGAGAGAGAGAAAGTAGAGGTAAATTGGACAATGCAGGGGAGGAGCACTGAAAATATTTTGGTTATGGACTGTAGATTGATGAAATTACTTGGTTATCTTGGAAGTCTTAAAACCCTGTTTTGATAGGGTCCAAGTAAGTTTTGGTTAAGTAAATTACTTGGTTATCTTGTAAATTTCATAACCTCGAATTATGGACCGTAGGTCTCAAGAACATTGTTTTAATTCATCATTTATAGTTAGAAAACAAAAGTTGTGCAATCCTTGTCTTGAATATTTATTGAAATTAGCCTGGTAAAGTGTATTTGAATTGAAATTGTTATTTCTTTCTAGAGTTTTTTCTTCAGAGTTGTGGCTGTCTCTTTCAAGATGATTAAATTTTTGTTTGTTGAGTTGACTTTGCAAATTTCTTCATCAGATCAAGGAACAACTAGATGCACAATCTGTCTCAGTAAAAGATGCTTATGGGGATGGACGACATGTTAGGTGAGGACTTTTTCCCTATTTTTTGCTTTTCTATGGTAGCTTAGTGTAAGAAGCTTGATTTCTCCAGAGTGCCTGAGAAATTATATATACTGGCCAGAAAAAAAAGGGTAAACATTTTCTTTTCTTCCATTTGTTCCTGATTCACGTTTGGACTTCTTGTAAAATTCGTTTGCCTCCAAAATTCAAATCATGTTGTTAAGACTCCAATTGTCCAGAGCTCATTAGTAGATTTTTTTTTAGTCTTTTAGCAATAAAAAATATTACAAAATAAATTAGAATTGAAACTTATGTTTAAATTGGGACGCATTTATTTTTCTCAAATAGAACTTATGTTTTGCTAAGTTAAGTTTGTAGTTGTATTATTATTTTTACGACCTTACTTGAACAGGATCTATTCTATAGGTTGTACAACTGTATCCTTGAGTTATAAAAATTGTATTATTATTTTTATTTGTGTCATTGTATTTTGGGCAGGAGCCTCTTTTCATTTCATCAATGTAAAGTTTGTTTCATTTTTTTTAAAGATCAAACTATATTGAAATGTAAATGATTGTAAATGACTGAAACTTAGAAGATAACCAAGTAATTCGAGGTACTTGGACCCTCCTCTCTTGAGACCTCCCTTAACTCTTTTTTTTTTTTTTTTGAGATAGAATCAACAACCTTCATTGAGAAAAAAAAATGAAAGAATACAAGTGCATACAAAAAAACAAGCCCACAAAAACACCCCCTCTAAAGAAAGAGTTTCCAACTAAGTAAGATGTTACGTAGAGAATAATTACAAAAAAGCTTCGATACCGAAGCTCAAAATGAAACATGAAACCTCACTAGGGTCCATGTCCATACCTCTAAACTAAGTAAGTTGTTACTGAGACCTCTCTCAACTCCTAATTCACTCACCAAGATAACCTATCTTCCCTATTCTCCTTCTCTCTATTTATAACCAAATTCCATAACCAACTCCCCTATCTAATTACTAGTATACCCTTAATATTAGTCTAACACCCTTATACCATTCCTATGGGAGATCTGTAGGCTTATACTCAACAACCCTTTTGGCATCTGTTTCTTGCCAAAGCACAATTTATGGCCTATGAGTTTGCTATCCTTTTTTTTTTTAAACAAGAAACAAGCCTCTTTATTAAGATAATGAAATGAGACAAATGCTCAAAGTACAAGATGATACAAAGAAAGAAAAACTTTGGGATCAACATATTATTGAACTAAAAAAAAAAATTAATCTTGAGACTCCAACATAAGTCCCCAATAAATTGATCAAATTTTTCTATCTCTGTTTTACCTACTCGAACATCCCGTGGTGCACTCCTCTTAAAGTTCATTGGAGAGGCATATTGGTTGGGGAGTTTCCTGTAGTTTGCATGTAATGTTGAAGTATAATTGGCTTCATAAGCCATATTCAAAGAACAAGTCAAGATGAATTGATTACTCAATTAAGTTAATTTTGCTTGCAGCATTGATGTTGTTTCTTCAGCCTTTGAGGGACAGACGGCTGTGAATAGGCAGAGGATGGTGTACAAAGCTATATGGGAGGAGCTACAAAGCACAGTGCATGCAGTGGATCAGATGACCACCAAAACACCTGCTGAAGCAGCAGCTCAGAAGTCATAA

mRNA sequence

ATGATGATGATTAAGGCTCCTCATGTGGCGTTCCGTCGGGTTCTTCCATTGTTTGTTCACCGCAACCAACCATTTTCGGTTGTCTCCCGCCAAATCACTTCCAACTCTGTCTGCACCGCCGCCGTTGTCGCCGCAATTACCTCCACATCCACCACCGGCGTCCGTAGTAAGAGCAGTAATGTTCCGAAATATAGCCGTGCTAATGGAACATTCCCGAAATGGGGTTCGAGTCGGAACTTGAGCATTAGAGCCACTCAAGTGAATGATTCTGGATCTATTGATTCCCCTCTCATGCAGTCAATGGAGAACAAGATCAAGGAACAACTAGATGCACAATCTGTCTCAGTAAAAGATGCTTATGGGGATGGACGACATGTTAGCATTGATGTTGTTTCTTCAGCCTTTGAGGGACAGACGGCTGTGAATAGGCAGAGGATGGTGTACAAAGCTATATGGGAGGAGCTACAAAGCACAGTGCATGCAGTGGATCAGATGACCACCAAAACACCTGCTGAAGCAGCAGCTCAGAAGTCATAA

Coding sequence (CDS)

ATGATGATGATTAAGGCTCCTCATGTGGCGTTCCGTCGGGTTCTTCCATTGTTTGTTCACCGCAACCAACCATTTTCGGTTGTCTCCCGCCAAATCACTTCCAACTCTGTCTGCACCGCCGCCGTTGTCGCCGCAATTACCTCCACATCCACCACCGGCGTCCGTAGTAAGAGCAGTAATGTTCCGAAATATAGCCGTGCTAATGGAACATTCCCGAAATGGGGTTCGAGTCGGAACTTGAGCATTAGAGCCACTCAAGTGAATGATTCTGGATCTATTGATTCCCCTCTCATGCAGTCAATGGAGAACAAGATCAAGGAACAACTAGATGCACAATCTGTCTCAGTAAAAGATGCTTATGGGGATGGACGACATGTTAGCATTGATGTTGTTTCTTCAGCCTTTGAGGGACAGACGGCTGTGAATAGGCAGAGGATGGTGTACAAAGCTATATGGGAGGAGCTACAAAGCACAGTGCATGCAGTGGATCAGATGACCACCAAAACACCTGCTGAAGCAGCAGCTCAGAAGTCATAA

Protein sequence

MMMIKAPHVAFRRVLPLFVHRNQPFSVVSRQITSNSVCTAAVVAAITSTSTTGVRSKSSNVPKYSRANGTFPKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTKTPAEAAAQKS

Homology

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BLAST of HG10009443 vs. NCBI nr
Match: XP_038906458.1 (protein BOLA4, chloroplastic/mitochondrial [Benincasa hispida])

HSP 1 Score: 308.5 bits (789), Expect = 3.7e-80
Identity = 163/178 (91.57%), Postives = 171/178 (96.07%), Query Frame = 0


Query: 1   MMMIKAPHVAFRRVLPLFVHRNQPFSVVSRQITSNSVCTAAVVAAITSTSTTGVRSKSSN 60
           MMMIK PHVAFRRVLPLFVH NQPFSVVSRQITSN VC AAVVAAITSTSTTGVRSKSSN
Sbjct: 1   MMMIKVPHVAFRRVLPLFVHHNQPFSVVSRQITSNCVCNAAVVAAITSTSTTGVRSKSSN 60

Query: 61  VPKYSRANGTFPKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAY 120
           + +YSR+NGTFPKWGSSR+LSIRATQVN+SGSIDSPLM+SMENKIK+QLDAQSVSVKDAY
Sbjct: 61  LARYSRSNGTFPKWGSSRSLSIRATQVNESGSIDSPLMKSMENKIKDQLDAQSVSVKDAY 120

Query: 121 GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTKTPAEAAAQKS 179
           GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTT+TPAEAAA  S
Sbjct: 121 GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAAHNS 178

[Close]

BLAST of HG10009443 vs. NCBI nr
Match: XP_004143637.1 (protein BOLA4, chloroplastic/mitochondrial [Cucumis sativus] >KGN50406.1 hypothetical protein Csa_000569 [Cucumis sativus])

HSP 1 Score: 303.1 bits (775), Expect = 1.5e-78
Identity = 161/177 (90.96%), Postives = 168/177 (94.92%), Query Frame = 0


Query: 2   MMIKAPHVAFRRVLPLFVHRNQPFSVVSRQITSNSVCTAAVVAAITSTSTTGVRSKSSNV 61
           MMIK P VAFRRVLP+F+ RN+PFSVVSRQ+TSN VCT AVVA I STSTTG+RSKSSNV
Sbjct: 1   MMIKVPQVAFRRVLPIFLPRNRPFSVVSRQVTSNCVCTPAVVAVIISTSTTGLRSKSSNV 60

Query: 62  PKYSRANGTFPKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAYG 121
            KYSRANGTFPKWGSSRNLSIRATQVN+SGSIDSPLMQSMENKIKEQLDAQSVSVKDAYG
Sbjct: 61  AKYSRANGTFPKWGSSRNLSIRATQVNESGSIDSPLMQSMENKIKEQLDAQSVSVKDAYG 120

Query: 122 DGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTKTPAEAAAQKS 179
           DGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTT+TPAEAAAQ S
Sbjct: 121 DGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAAQNS 177

[Close]

BLAST of HG10009443 vs. NCBI nr
Match: XP_008467240.1 (PREDICTED: protein BOLA4, chloroplastic/mitochondrial [Cucumis melo])

HSP 1 Score: 300.4 bits (768), Expect = 1.0e-77
Identity = 161/178 (90.45%), Postives = 167/178 (93.82%), Query Frame = 0


Query: 1   MMMIKAPHVAFRRVLPLFVHRNQPFSVVSRQITSNSVCTAAVVAAITSTSTTGVRSKSSN 60
           M MIK P +AFRRVLP+ + RNQPFSVVSRQITSN VCTAAVVA ITS S TG+RSKSSN
Sbjct: 1   MTMIKVPQLAFRRVLPMLLPRNQPFSVVSRQITSNCVCTAAVVAVITSKSNTGLRSKSSN 60

Query: 61  VPKYSRANGTFPKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAY 120
           V KYSRANGTFPKWGSSRNLSIRATQVN+SGSIDSPLMQSMENKIKEQLDAQSVSVKDAY
Sbjct: 61  VVKYSRANGTFPKWGSSRNLSIRATQVNESGSIDSPLMQSMENKIKEQLDAQSVSVKDAY 120

Query: 121 GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTKTPAEAAAQKS 179
           GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTT+TPAEAAAQ S
Sbjct: 121 GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAAQNS 178

[Close]

BLAST of HG10009443 vs. NCBI nr
Match: KAA0055158.1 (protein BOLA4 [Cucumis melo var. makuwa])

HSP 1 Score: 298.1 bits (762), Expect = 5.0e-77
Identity = 160/178 (89.89%), Postives = 166/178 (93.26%), Query Frame = 0


Query: 1   MMMIKAPHVAFRRVLPLFVHRNQPFSVVSRQITSNSVCTAAVVAAITSTSTTGVRSKSSN 60
           M MIK P +AFRRVLP+ + RNQPFSVVSRQITSN VCTAAVVA ITS S TG+RSKSSN
Sbjct: 1   MTMIKVPQLAFRRVLPMLLPRNQPFSVVSRQITSNCVCTAAVVAVITSKSNTGLRSKSSN 60

Query: 61  VPKYSRANGTFPKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAY 120
           V KYSRANGTFPKWGSSRN SIRATQVN+SGSIDSPLMQSMENKIKEQLDAQSVSVKDAY
Sbjct: 61  VVKYSRANGTFPKWGSSRNSSIRATQVNESGSIDSPLMQSMENKIKEQLDAQSVSVKDAY 120

Query: 121 GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTKTPAEAAAQKS 179
           GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTT+TPAEAAAQ S
Sbjct: 121 GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAAQNS 178

[Close]

BLAST of HG10009443 vs. NCBI nr
Match: XP_022159690.1 (protein BOLA4, chloroplastic/mitochondrial [Momordica charantia])

HSP 1 Score: 274.2 bits (700), Expect = 7.7e-70
Identity = 149/178 (83.71%), Postives = 160/178 (89.89%), Query Frame = 0


Query: 1   MMMIKAPHVAFRRVLPLFVHRNQPFSVVSRQITSNSVCTAAVVAAITSTSTTGVRSKSSN 60
           M M++ P VAFRRVLPLFVHR+ PF VVSRQIT+N V TAA  AAI+S +TT VR KSSN
Sbjct: 1   MAMVRVPQVAFRRVLPLFVHRDVPFLVVSRQITTNCVRTAA--AAISSRTTTSVRCKSSN 60

Query: 61  VPKYSRANGTFPKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAY 120
           V KY  ANGTF KWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSV+VKDAY
Sbjct: 61  VAKYGSANGTFSKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVTVKDAY 120

Query: 121 GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTKTPAEAAAQKS 179
           GDGRHVSIDV+SSAFEGQ+AVNRQRMVYKAIWEELQSTVHAVDQMTT+TPAEAA + S
Sbjct: 121 GDGRHVSIDVISSAFEGQSAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAVKNS 176

[Close]

BLAST of HG10009443 vs. ExPASy Swiss-Prot
Match: Q9LF68 (Protein BOLA4, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=BOLA4 PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.1e-33
Identity = 90/158 (56.96%), Postives = 110/158 (69.62%), Query Frame = 0


Query: 17  LFVHRNQPFSVVSRQIT--SNSVCTAAVVAAITSTSTTGVRSKSSNVPKYSRANGTFPKW 76
           LF    +PF+  S  +   +NS C    V+A+ S   T   S   N  + SR +G     
Sbjct: 25  LFQSSKRPFASFSAPLVRFTNSRC----VSAVLSRKETAPSSIYGN--RVSRVSGFGALD 84

Query: 77  GSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAYGDGRHVSIDVVSSA 136
             S N S +++Q+ND+GSID  LMQSME KIKEQL+A+SV+V D  GDGRHV I+VVSSA
Sbjct: 85  IRSLNFSTKSSQINDAGSIDQTLMQSMELKIKEQLNAESVTVTDMSGDGRHVCINVVSSA 144

Query: 137 FEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTKTPAE 173
           FEGQ+AVNRQRMVYKAIWEELQ+ VHAVDQMTTKTP+E
Sbjct: 145 FEGQSAVNRQRMVYKAIWEELQNVVHAVDQMTTKTPSE 176

[Close]

BLAST of HG10009443 vs. ExPASy Swiss-Prot
Match: Q682I1 (Protein BOLA1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BOLA1 PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 5.8e-04
Identity = 37/136 (27.21%), Postives = 74/136 (54.41%), Query Frame = 0


Query: 60  NVPKY----SRANGTFPKWGSSRNLSIRATQV--NDSGSIDSPLMQSMENKIKEQLDAQS 119
           +VPK+    S++ GT      SR++++ + +   +DSG+I++   + M  K++++L+   
Sbjct: 31  SVPKFFNSESKSTGT-----GSRSVAMSSVEKTGSDSGAIENRASR-MREKLQKELEPVE 90

Query: 120 VSVKDA-------------YGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVH 177
           + ++D                D  H ++ +VS  FEG   V R R+VY  + EEL + +H
Sbjct: 91  LVIEDVSYQHAGHAGMKGRTDDETHFNVKIVSKGFEGMNLVKRHRLVYHLLREELDTGLH 150

[Close]

BLAST of HG10009443 vs. ExPASy TrEMBL
Match: A0A0A0KRR5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172860 PE=3 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 7.5e-79
Identity = 161/177 (90.96%), Postives = 168/177 (94.92%), Query Frame = 0


Query: 2   MMIKAPHVAFRRVLPLFVHRNQPFSVVSRQITSNSVCTAAVVAAITSTSTTGVRSKSSNV 61
           MMIK P VAFRRVLP+F+ RN+PFSVVSRQ+TSN VCT AVVA I STSTTG+RSKSSNV
Sbjct: 1   MMIKVPQVAFRRVLPIFLPRNRPFSVVSRQVTSNCVCTPAVVAVIISTSTTGLRSKSSNV 60

Query: 62  PKYSRANGTFPKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAYG 121
            KYSRANGTFPKWGSSRNLSIRATQVN+SGSIDSPLMQSMENKIKEQLDAQSVSVKDAYG
Sbjct: 61  AKYSRANGTFPKWGSSRNLSIRATQVNESGSIDSPLMQSMENKIKEQLDAQSVSVKDAYG 120

Query: 122 DGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTKTPAEAAAQKS 179
           DGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTT+TPAEAAAQ S
Sbjct: 121 DGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAAQNS 177

[Close]

BLAST of HG10009443 vs. ExPASy TrEMBL
Match: A0A1S3CT29 (protein BOLA4, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC103504639 PE=3 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 4.8e-78
Identity = 161/178 (90.45%), Postives = 167/178 (93.82%), Query Frame = 0


Query: 1   MMMIKAPHVAFRRVLPLFVHRNQPFSVVSRQITSNSVCTAAVVAAITSTSTTGVRSKSSN 60
           M MIK P +AFRRVLP+ + RNQPFSVVSRQITSN VCTAAVVA ITS S TG+RSKSSN
Sbjct: 1   MTMIKVPQLAFRRVLPMLLPRNQPFSVVSRQITSNCVCTAAVVAVITSKSNTGLRSKSSN 60

Query: 61  VPKYSRANGTFPKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAY 120
           V KYSRANGTFPKWGSSRNLSIRATQVN+SGSIDSPLMQSMENKIKEQLDAQSVSVKDAY
Sbjct: 61  VVKYSRANGTFPKWGSSRNLSIRATQVNESGSIDSPLMQSMENKIKEQLDAQSVSVKDAY 120

Query: 121 GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTKTPAEAAAQKS 179
           GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTT+TPAEAAAQ S
Sbjct: 121 GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAAQNS 178

[Close]

BLAST of HG10009443 vs. ExPASy TrEMBL
Match: A0A5A7UJH5 (Protein BOLA4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00900 PE=3 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.4e-77
Identity = 160/178 (89.89%), Postives = 166/178 (93.26%), Query Frame = 0


Query: 1   MMMIKAPHVAFRRVLPLFVHRNQPFSVVSRQITSNSVCTAAVVAAITSTSTTGVRSKSSN 60
           M MIK P +AFRRVLP+ + RNQPFSVVSRQITSN VCTAAVVA ITS S TG+RSKSSN
Sbjct: 1   MTMIKVPQLAFRRVLPMLLPRNQPFSVVSRQITSNCVCTAAVVAVITSKSNTGLRSKSSN 60

Query: 61  VPKYSRANGTFPKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAY 120
           V KYSRANGTFPKWGSSRN SIRATQVN+SGSIDSPLMQSMENKIKEQLDAQSVSVKDAY
Sbjct: 61  VVKYSRANGTFPKWGSSRNSSIRATQVNESGSIDSPLMQSMENKIKEQLDAQSVSVKDAY 120

Query: 121 GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTKTPAEAAAQKS 179
           GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTT+TPAEAAAQ S
Sbjct: 121 GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAAQNS 178

[Close]

BLAST of HG10009443 vs. ExPASy TrEMBL
Match: A0A6J1DZG6 (protein BOLA4, chloroplastic/mitochondrial OS=Momordica charantia OX=3673 GN=LOC111026033 PE=3 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.7e-70
Identity = 149/178 (83.71%), Postives = 160/178 (89.89%), Query Frame = 0


Query: 1   MMMIKAPHVAFRRVLPLFVHRNQPFSVVSRQITSNSVCTAAVVAAITSTSTTGVRSKSSN 60
           M M++ P VAFRRVLPLFVHR+ PF VVSRQIT+N V TAA  AAI+S +TT VR KSSN
Sbjct: 1   MAMVRVPQVAFRRVLPLFVHRDVPFLVVSRQITTNCVRTAA--AAISSRTTTSVRCKSSN 60

Query: 61  VPKYSRANGTFPKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAY 120
           V KY  ANGTF KWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSV+VKDAY
Sbjct: 61  VAKYGSANGTFSKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVTVKDAY 120

Query: 121 GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTKTPAEAAAQKS 179
           GDGRHVSIDV+SSAFEGQ+AVNRQRMVYKAIWEELQSTVHAVDQMTT+TPAEAA + S
Sbjct: 121 GDGRHVSIDVISSAFEGQSAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAVKNS 176

[Close]

BLAST of HG10009443 vs. ExPASy TrEMBL
Match: A0A6J1K139 (protein BOLA4, chloroplastic/mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111491454 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 7.0e-69
Identity = 145/176 (82.39%), Postives = 156/176 (88.64%), Query Frame = 0


Query: 3   MIKAPHVAFRRVLPLFVHRNQPFSVVSRQITSNSVCTAAVVAAITSTSTTGVRSKSSNVP 62
           MIK P VAFRRVLPLFVHRN+ F +VS+Q T+N V TAAV AAIT+T+ TGV SKSSNV 
Sbjct: 6   MIKVPQVAFRRVLPLFVHRNEQFFIVSQQFTTNCVRTAAVSAAITTTTATGVCSKSSNVL 65

Query: 63  KYSRANGTFPKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAYGD 122
           K+S  NG F  WGSSRN+ +RATQVNDSGSIDSPLMQSMENKIKEQL+AQSVSVKDAYGD
Sbjct: 66  KFSYVNGRFSNWGSSRNMCVRATQVNDSGSIDSPLMQSMENKIKEQLEAQSVSVKDAYGD 125

Query: 123 GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTKTPAEAAAQKS 179
           GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTT+TP EA AQ S
Sbjct: 126 GRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPTEAEAQNS 181

[Close]

BLAST of HG10009443 vs. TAIR 10
Match: AT5G17560.1 (BolA-like family protein )

HSP 1 Score: 143.7 bits (361), Expect = 1.5e-34
Identity = 90/158 (56.96%), Postives = 110/158 (69.62%), Query Frame = 0


Query: 17  LFVHRNQPFSVVSRQIT--SNSVCTAAVVAAITSTSTTGVRSKSSNVPKYSRANGTFPKW 76
           LF    +PF+  S  +   +NS C    V+A+ S   T   S   N  + SR +G     
Sbjct: 25  LFQSSKRPFASFSAPLVRFTNSRC----VSAVLSRKETAPSSIYGN--RVSRVSGFGALD 84

Query: 77  GSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAYGDGRHVSIDVVSSA 136
             S N S +++Q+ND+GSID  LMQSME KIKEQL+A+SV+V D  GDGRHV I+VVSSA
Sbjct: 85  IRSLNFSTKSSQINDAGSIDQTLMQSMELKIKEQLNAESVTVTDMSGDGRHVCINVVSSA 144

Query: 137 FEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTKTPAE 173
           FEGQ+AVNRQRMVYKAIWEELQ+ VHAVDQMTTKTP+E
Sbjct: 145 FEGQSAVNRQRMVYKAIWEELQNVVHAVDQMTTKTPSE 176

[Close]

BLAST of HG10009443 vs. TAIR 10
Match: AT1G55805.1 (BolA-like family protein )

HSP 1 Score: 45.8 bits (107), Expect = 4.1e-05
Identity = 37/136 (27.21%), Postives = 74/136 (54.41%), Query Frame = 0


Query: 60  NVPKY----SRANGTFPKWGSSRNLSIRATQV--NDSGSIDSPLMQSMENKIKEQLDAQS 119
           +VPK+    S++ GT      SR++++ + +   +DSG+I++   + M  K++++L+   
Sbjct: 31  SVPKFFNSESKSTGT-----GSRSVAMSSVEKTGSDSGAIENRASR-MREKLQKELEPVE 90

Query: 120 VSVKDA-------------YGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVH 177
           + ++D                D  H ++ +VS  FEG   V R R+VY  + EEL + +H
Sbjct: 91  LVIEDVSYQHAGHAGMKGRTDDETHFNVKIVSKGFEGMNLVKRHRLVYHLLREELDTGLH 150

[Close]

BLAST of HG10009443 vs. TAIR 10
Match: AT4G26500.1 (chloroplast sulfur E )

HSP 1 Score: 44.3 bits (103), Expect = 1.2e-04
Identity = 28/87 (32.18%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 101 MENKIKEQLDAQSVSVKD--------------AYGDGR-HVSIDVVSSAFEGQTAVNRQR 160
           +  K++++LD   + V+D              A  DG  H ++ +VS AF+G++ V R R
Sbjct: 285 IREKLEKELDPVELEVEDVSYQHAGHAAVRGSAGDDGETHFNLRIVSDAFQGKSLVKRHR 344

Query: 161 MVYKAIWEELQSTVHAVDQMTTKTPAE 173
           ++Y  + +EL+S +HA+  +  KTPAE
Sbjct: 345 LIYDLLQDELKSGLHAL-SIVAKTPAE 370

The following BLAST results are available for this feature:

BLAST of HG10009443 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906458.1	3.7e-80	91.57	protein BOLA4, chloroplastic/mitochondrial [Benincasa hispida]	[more]
XP_004143637.1	1.5e-78	90.96	protein BOLA4, chloroplastic/mitochondrial [Cucumis sativus] >KGN50406.1 hypothe...	[more]
XP_008467240.1	1.0e-77	90.45	PREDICTED: protein BOLA4, chloroplastic/mitochondrial [Cucumis melo]	[more]
KAA0055158.1	5.0e-77	89.89	protein BOLA4 [Cucumis melo var. makuwa]	[more]
XP_022159690.1	7.7e-70	83.71	protein BOLA4, chloroplastic/mitochondrial [Momordica charantia]	[more]

BLAST of HG10009443 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LF68	2.1e-33	56.96	Protein BOLA4, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=BO...	[more]
Q682I1	5.8e-04	27.21	Protein BOLA1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BOLA1 PE=1 SV=1	[more]

BLAST of HG10009443 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRR5	7.5e-79	90.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172860 PE=3 SV=1	[more]
A0A1S3CT29	4.8e-78	90.45	protein BOLA4, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC1035046...	[more]
A0A5A7UJH5	2.4e-77	89.89	Protein BOLA4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00900 ...	[more]
A0A6J1DZG6	3.7e-70	83.71	protein BOLA4, chloroplastic/mitochondrial OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1K139	7.0e-69	82.39	protein BOLA4, chloroplastic/mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of HG10009443 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17560.1	1.5e-34	56.96	BolA-like family protein	[more]
AT1G55805.1	4.1e-05	27.21	BolA-like family protein	[more]
AT4G26500.1	1.2e-04	32.18	chloroplast sulfur E	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 74..178 e-value: 1.1E-23 score: 85.5
None	No IPR available	PANTHER	PTHR46230:SF4	PROTEIN BOLA4, CHLOROPLASTIC/MITOCHONDRIAL	coord: 28..177
None	No IPR available	PANTHER	PTHR46230	FAMILY NOT NAMED	coord: 28..177
IPR002634	BolA protein	PFAM	PF01722	BolA	coord: 120..172 e-value: 1.8E-13 score: 50.6
IPR036065	BolA-like superfamily	SUPERFAMILY	82657	BolA-like	coord: 86..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10009443.1	HG10009443.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005739	mitochondrion