HG10009435 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAAATTAGAATGGCACTTTGGAGGAAGATCATTTTCACGTCGAGCCACCGTCGATCACTCCCGACGACACCGCCGCCCTTCTCTTCCGAGCTGTATGACCACCCTCTTTCACTTTTTTGATTTTCGTTCCTCTCGTTTTACTTGCATTGTCTTCGACAATCGCTATCCGTCCTCCTTCGACCTCTCGCCTCATCCTCCTTCTCTACCCAAAGCTTCCTATCATGGTATATACTTTGAAAATTTTAATTTTAATTTTTTTTTAGAAATATTGTTTGGTCAATTTGATCCTCTATGAATGCTTGTTATGTATGCACGAGTAGATTAATTAGAATATGAATCCATGTGATATCCTAGATAAAGTTTTGATGATGTAATAATGGATGATATTAAAAAAAGCGTTATATTATTACTTAATATTTTTATGGTTAATTATGGGAAAATTTTCATATATAGAAAAAATGTTAAACTATTTAAAAAAAATAACAAAAAAAATGCTGATAGACATTGATAGACTTTTATTAGCATCTACCAATGATAGACTTCTATCATTTCTATCACTAATAGACCTTGATAGACTTCTATCAGCGTCTATCACAACTATCTAAAAATTTTGTTATTTTATGTAAATAAACTTCCTTATTTTTCTATTTTAAAAAAATTCTCCATATATATATAGGGCTGTTTTCAAATATAGAAAAATGAACCAAACTATTTACAAATATAGAAAATTTTTACTATCTATCAGCGATAGACTGCGATACAATTTTATCGCTCAAGCAATAGAATTCTATTGTGATATATTGTTGATAGACAATGAAATTTTTCTATATTTGTAAATAGTTTGATATTTTTTCTATTTATAATAATTTTCCTATATAAAGAGGTCATTTTCATACTATAAAGAAATAAGAAAAAAAAAAAAAGGAGAGATGTGACCATTTTTATTTATTTAATTTTAAATTTACTTTTATATTTTCTTTGGGAAATTCTCATAAACTTTTGGTACCATCTTTTTTGTACTTCAGGTGTTGAAGCACCAAGGAACAGCTTGGAATTAGATGGAGCTTCAATTCCTTGCTTAAGAATTAAAGAAGAAAATTTGCAACTTCAAGTAAACTTTTCCTCTCTCCTCTTTCATATTCAAATGATAGTGTAATTATGTTCAAGCAATCATTTCTTTAATTTTTATATAAGATTTTTAAATTTTACTAAAATATAATATATATATATATCTTAAAACAGATGGGACTTCAAATCAAAACTAGAAATGGTTGCACAAAACCAAAAGCAAGTGAGCAACAACTTCCAAATAATGATCACATTATTGCATTAGAATCTCCAAGTGCAAAGAGACCAAATCTCTTGGCAAGATTAATGGGTCTTGATATTCTCCCTCAAACCTCCTCTTCTTCTTCCAATTCTCACGGACCAAATTACGGAACCCGTTCTCTCCCAGAGAGCCCGAGAATATCGTCAGCAAGATTATCAGACGTCGACTATCATCGTCGTCTCTCACTCCAAATTATTCCTGAAAAAGAGAATATCGAAATTTGTACTGAAGAGATTAAGCAAGAAAAAGAAAAAGTGAGAAGGAAAGTTGCACTCGTTGATATCACTAATAATAACAAGAAAACAGAATTCGGAAAACAAGAAGTTGGTATTAGTCAAAGTAAAGTCGAGATCAAGTCTAATAAGAAACTTAAGAAGATGGTAGCTGATGAATCAAGTTGTTCAAAAATCGTGCTTAGAAATCGAGAGGTTATGATTTCCAAGAAGCAAAAGCTAATATCGATGTCGATGCAAAAACGGAAGCCAAGGGCTCGAGAAGGTGAAACATTTGATTGTCCAACAAGTAATAACCTTCTTAACAACGTCAATCATTCAACTATTTTTCCAGTAAAGAAAGAGCCTTCTCCTCCGGCGACCAAGGTCCCTCGTGAACAGGTACTACACATTACTTTTCATGTCCTTTCAATTTACTTTAGAAGAAATTTTAGGATATTTATATAAATAATTATTAAAATAATTATTAAAAATAACTTTCGTTTACTTTTTTACATGTGACTTATTTTTAATTGACCATAAAATATTGTTGAAATAAAGTTGTATGAAACTAGATAATGTAAATAATTAAATATGTATAAACTATACACAGTCATGTGAGTCAATTCGAAAAATGGACCTCTTCCAAGAGAGAACACAAATAAGAAATTCAATAGTATAATAAATTAAATATTATATATTTAAATATATCATCACTTTTATTATTCTCATATTTCTCCTTAAAAAAATAACTTAACCTTCTTCAAAGGTGTTGTTGTTGTTATTTTTATTTTTATTATTATTATTATTATTATTATTATTAAAGTTTAAAAATAAAAAAAATTATAATAAACAGAAATTCTAGGTAGGTGACTATCATAAATTGAACTCATAACTCCTTAGCTCTTTGACCTTCTTTGATGTTTTTACTGTCACTAGACTAACTCATGATAGTTAATATAGATAAATTGTTACAACACTAATTTTAAAAAGGCCATATATTTAAATATTTATAAATGAATTTCAACTACCATAAAATTGTAGTTTTTTTTAATACTTTTTTAAAACTATGGGGTTGTGGGTTCGCGCCCAGATACTCACGCATATCATAATAAAAAAAAACTTTTTTAAAATAAATTTTATTATTATTTTTCTTTCTAACTCCTTAAAATCAATTTTGAAATATATAGACCGATTTTGAAAACTACCCTTCTAATTTTTCTTTTAAAAACATTTATGGATAAACTTTTAACATGTTTCCATGGATTATAAAATTAACTATTGAGTTCTTCAAAAAATTAAAATAATATAAAATAAAATAGATTATTGCTGGTAAACAATTGTTTTCTTTATTGAAGACCAAAAGATAATTATGAAACTGAGTGTTTCAGTTTTTTTTTAAAATAATAATAACAGTAGTAATTTCTATTTGAAAGATCACAAAAATAAATCTTGAAAATTCTAACCATAAAATATTATTAAAAAATAAACTGCAAAAAAAAAAAAAAAAAAGACAAAAGTACTGATATAAAAATTTGAAACATTGTTTTAATTTATAAAATTTCAGTGTATTTCTTTAGAGTGAGCAGGTCATGTAAGATTTTTGTGCAGAAGAATAAATTGATTATTTAAGTTGGTCAAGAGGTTCAAATTTTTCTTGTGAAAAATAGGTGAATAACTTTATTGAAGAATTAAATGCAACATTTTGTTTTTCTTCACAAAATTGGTTTTTAAGAAGGAAAAAATAAACTTTAAGCCTAAAAGTTATTTCTCATTGGTATTTTTTTGTTTTTGAATAATTGGTTTACCTTAAAAAAAATGGTTTTAAAGGACAAATTTGAAAAATATTTTCAAATATAACAAAATAGTATATTTTCATATGAAGAAACTTTTTACTATTTTACCATATTTATAAATAAGTGGGCCATTTTGCAAAATTTATTTTTAAGCCTATAAGTCTTTCCTTTCCCTTATAGCATATATTACAAAAAAAATTTCAATTTTTTTCCAAGAAAAAAAGGTGTCTTAAGCCTTTTTATGAAGGTTTTCTCTCTCCTTAATTTGGCTTGGCTATAGTGTCATAAAAAGTCATATTTGTTGTAGTTCTACAACTCTTTAGTTGAAGATTAACGTCACTAAATATTAGAACTCATCATATTATTTTTAAATAATATCTCGGTAACATTATTTATAAATGTAAGCTCATCAAATTAACTATAAAGATCTATTATTAGATATAAAATTAAAAGGTAAAAAATCTATAAAAGATATTTTTAAAATATAAAGGATCGATTAAAAAATTTAGAACTTGGGGCTTCAACTTAACTCTAAAAACTAGATGAGTATTTAAATAGGAAAAAAAAAGGCCCATTTGAAATTTCATAACCATTTAGTTTTTATTTTCTTACGATTTCTTTATCATGATTTTTACTTTTCTTTTAACTACACAACATTTTTATTTATTTATTTAGATTTTTATAACTCTCAATTTTTAAAATCCAAAAACTAAAATTTGGACTCATTTTGGAAACCACTTGGTTTTCTAAAAAAATTGGGCTTGTTTTCTCATAATTTTTTTTAATGGTTTCATATTTTGACACATTAGAATTCTTAGCCAATTTCCAAAAACAAAAGTAAATTTTTGAAAACTAATTTTTTTTACTTTTTAAAATTTGGCTTTGATTTTGAAAATACTCAAAAAATGTAGACAACATAACATAAAAAACAATACATGGAGGTGGTGTTTATAGATTTAATTTTAAAACAAATTAAAAATTAAGTCTCCGTTTAGTAACTATTTGATTTTTTAAAATAAAGCCTATAAACAATCCACTTCTAAATTTCTTGCTTTCTTTACTACTTTCAACCAATATTTTTAAAATATAAGCCAAGTTTTAAAAAATATATATATAAGTTGCTTTTAAAAAAGGAAAATTTTCACCGATAGAAAAAATGTCAAACTATTTACAAAAAAATAACAAAAGAAAAAAAAAAATACTAATATACATTGATAGACTTCGATCAACGTCTATCACAACTATCTAAAAATTTTGTTATTTTGTATAAATAGTTTTTCTTATTTTTCTATTTTTAAAAATTTCTCTTTTTAAAAACTTATTTTTGTTTTTGAAACGTGGGAATAAGCTTAATTTTTTAAAAAATCAAAAACCATCTACCAACATCACAAATTGTTTCCAAAACAGCCGTGTAGGTACTCAAAGGGCAAGGCGAAGCCGGCGGGCAGAGACGGCGGAGAAAGAAACGCCTTGAACCTTACCACCACCACAGACGGCGGATCAGCCGAGTTCAAATACATCAAAAGAATACTAACCAATCACCGCAATTCAAACTTGATCATCTCACCCTCTAATAACCCAATGAACCCCTCAATCTTCCACCACCTAGAAACCGCGGCCGCCGCCGCCGTGGAGGACCAGCAATGGAACAAACGACTACTGAACTGTTGGCACGTGCGAAGAGGAATGAAGAGATGGGAATTGGGTGAGGAAGTGAGGGAGAGAGTGAAGAAAGAGTACTTCCCACGTGTGAAATATGAAGTAGTGGAAAATATGGATACCTTAATAATCAACAAGAGAATGGCGGAGGAAATAGAAGGGATTGTGAAGGTGGTTGAGCTTCACATTTTGGATTCCCTTTTACGAGAAACTATTGCTCTAATTTCTTCCCTACCAAAATGTTCTCATTTTCATAATTTCTAA ATGGGAAAATTAGAATGGCACTTTGGAGGAAGATCATTTTCACGTCGAGCCACCGTCGATCACTCCCGACGACACCGCCGCCCTTCTCTTCCGAGCTGTATGACCACCCTCTTTCACTTTTTTGATTTTCGTTCCTCTCGTTTTACTTGCATTGTCTTCGACAATCGCTATCCGTCCTCCTTCGACCTCTCGCCTCATCCTCCTTCTCTACCCAAAGCTTCCTATCATGGTGTTGAAGCACCAAGGAACAGCTTGGAATTAGATGGAGCTTCAATTCCTTGCTTAAGAATTAAAGAAGAAAATTTGCAACTTCAAATGGGACTTCAAATCAAAACTAGAAATGGTTGCACAAAACCAAAAGCAAGTGAGCAACAACTTCCAAATAATGATCACATTATTGCATTAGAATCTCCAAGTGCAAAGAGACCAAATCTCTTGGCAAGATTAATGGGTCTTGATATTCTCCCTCAAACCTCCTCTTCTTCTTCCAATTCTCACGGACCAAATTACGGAACCCGTTCTCTCCCAGAGAGCCCGAGAATATCGTCAGCAAGATTATCAGACGTCGACTATCATCGTCGTCTCTCACTCCAAATTATTCCTGAAAAAGAGAATATCGAAATTTGTACTGAAGAGATTAAGCAAGAAAAAGAAAAAGTGAGAAGGAAAGTTGCACTCGTTGATATCACTAATAATAACAAGAAAACAGAATTCGGAAAACAAGAAGTTGGTATTAGTCAAAGTAAAGTCGAGATCAAGTCTAATAAGAAACTTAAGAAGATGGTAGCTGATGAATCAAGTTGTTCAAAAATCGTGCTTAGAAATCGAGAGGTTATGATTTCCAAGAAGCAAAAGCTAATATCGATGTCGATGCAAAAACGGAAGCCAAGGGCTCGAGAAGGTGAAACATTTGATTGTCCAACAAGTAATAACCTTCTTAACAACGTCAATCATTCAACTATTTTTCCAGTAAAGAAAGAGCCTTCTCCTCCGGCGACCAAGGTCCCTCGTGAACAGCCGTGTAGGTACTCAAAGGGCAAGGCGAAGCCGGCGGGCAGAGACGGCGGAGAAAGAAACGCCTTGAACCTTACCACCACCACAGACGGCGGATCAGCCGAGTTCAAATACATCAAAAGAATACTAACCAATCACCGCAATTCAAACTTGATCATCTCACCCTCTAATAACCCAATGAACCCCTCAATCTTCCACCACCTAGAAACCGCGGCCGCCGCCGCCGTGGAGGACCAGCAATGGAACAAACGACTACTGAACTGTTGGCACGTGCGAAGAGGAATGAAGAGATGGGAATTGGGTGAGGAAGTGAGGGAGAGAGTGAAGAAAGAGTACTTCCCACGTGTGAAATATGAAGTAGTGGAAAATATGGATACCTTAATAATCAACAAGAGAATGGCGGAGGAAATAGAAGGGATTGTGAAGGTGGTTGAGCTTCACATTTTGGATTCCCTTTTACGAGAAACTATTGCTCTAATTTCTTCCCTACCAAAATGTTCTCATTTTCATAATTTCTAA ATGGGAAAATTAGAATGGCACTTTGGAGGAAGATCATTTTCACGTCGAGCCACCGTCGATCACTCCCGACGACACCGCCGCCCTTCTCTTCCGAGCTGTATGACCACCCTCTTTCACTTTTTTGATTTTCGTTCCTCTCGTTTTACTTGCATTGTCTTCGACAATCGCTATCCGTCCTCCTTCGACCTCTCGCCTCATCCTCCTTCTCTACCCAAAGCTTCCTATCATGGTGTTGAAGCACCAAGGAACAGCTTGGAATTAGATGGAGCTTCAATTCCTTGCTTAAGAATTAAAGAAGAAAATTTGCAACTTCAAATGGGACTTCAAATCAAAACTAGAAATGGTTGCACAAAACCAAAAGCAAGTGAGCAACAACTTCCAAATAATGATCACATTATTGCATTAGAATCTCCAAGTGCAAAGAGACCAAATCTCTTGGCAAGATTAATGGGTCTTGATATTCTCCCTCAAACCTCCTCTTCTTCTTCCAATTCTCACGGACCAAATTACGGAACCCGTTCTCTCCCAGAGAGCCCGAGAATATCGTCAGCAAGATTATCAGACGTCGACTATCATCGTCGTCTCTCACTCCAAATTATTCCTGAAAAAGAGAATATCGAAATTTGTACTGAAGAGATTAAGCAAGAAAAAGAAAAAGTGAGAAGGAAAGTTGCACTCGTTGATATCACTAATAATAACAAGAAAACAGAATTCGGAAAACAAGAAGTTGGTATTAGTCAAAGTAAAGTCGAGATCAAGTCTAATAAGAAACTTAAGAAGATGGTAGCTGATGAATCAAGTTGTTCAAAAATCGTGCTTAGAAATCGAGAGGTTATGATTTCCAAGAAGCAAAAGCTAATATCGATGTCGATGCAAAAACGGAAGCCAAGGGCTCGAGAAGGTGAAACATTTGATTGTCCAACAAGTAATAACCTTCTTAACAACGTCAATCATTCAACTATTTTTCCAGTAAAGAAAGAGCCTTCTCCTCCGGCGACCAAGGTCCCTCGTGAACAGCCGTGTAGGTACTCAAAGGGCAAGGCGAAGCCGGCGGGCAGAGACGGCGGAGAAAGAAACGCCTTGAACCTTACCACCACCACAGACGGCGGATCAGCCGAGTTCAAATACATCAAAAGAATACTAACCAATCACCGCAATTCAAACTTGATCATCTCACCCTCTAATAACCCAATGAACCCCTCAATCTTCCACCACCTAGAAACCGCGGCCGCCGCCGCCGTGGAGGACCAGCAATGGAACAAACGACTACTGAACTGTTGGCACGTGCGAAGAGGAATGAAGAGATGGGAATTGGGTGAGGAAGTGAGGGAGAGAGTGAAGAAAGAGTACTTCCCACGTGTGAAATATGAAGTAGTGGAAAATATGGATACCTTAATAATCAACAAGAGAATGGCGGAGGAAATAGAAGGGATTGTGAAGGTGGTTGAGCTTCACATTTTGGATTCCCTTTTACGAGAAACTATTGCTCTAATTTCTTCCCTACCAAAATGTTCTCATTTTCATAATTTCTAA MGKLEWHFGGRSFSRRATVDHSRRHRRPSLPSCMTTLFHFFDFRSSRFTCIVFDNRYPSSFDLSPHPPSLPKASYHGVEAPRNSLELDGASIPCLRIKEENLQLQMGLQIKTRNGCTKPKASEQQLPNNDHIIALESPSAKRPNLLARLMGLDILPQTSSSSSNSHGPNYGTRSLPESPRISSARLSDVDYHRRLSLQIIPEKENIEICTEEIKQEKEKVRRKVALVDITNNNKKTEFGKQEVGISQSKVEIKSNKKLKKMVADESSCSKIVLRNREVMISKKQKLISMSMQKRKPRAREGETFDCPTSNNLLNNVNHSTIFPVKKEPSPPATKVPREQPCRYSKGKAKPAGRDGGERNALNLTTTTDGGSAEFKYIKRILTNHRNSNLIISPSNNPMNPSIFHHLETAAAAAVEDQQWNKRLLNCWHVRRGMKRWELGEEVRERVKKEYFPRVKYEVVENMDTLIINKRMAEEIEGIVKVVELHILDSLLRETIALISSLPKCSHFHNF Homology
BLAST of HG10009435 vs. NCBI nr
Match: XP_011656164.1 (uncharacterized protein LOC105435648 [Cucumis sativus] >KGN50399.1 hypothetical protein Csa_000155 [Cucumis sativus]) HSP 1 Score: 443.0 bits (1138), Expect = 3.6e-120 Identity = 313/543 (57.64%), Postives = 363/543 (66.85%), Query Frame = 0
BLAST of HG10009435 vs. NCBI nr
Match: KAG7035594.1 (hypothetical protein SDJN02_02391, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 272.3 bits (695), Expect = 8.4e-69 Identity = 224/533 (42.03%), Postives = 274/533 (51.41%), Query Frame = 0
BLAST of HG10009435 vs. NCBI nr
Match: KAA0055152.1 (putative dna repair [Cucumis melo var. makuwa] >TYK00310.1 putative dna repair [Cucumis melo var. makuwa]) HSP 1 Score: 255.0 bits (650), Expect = 1.4e-63 Identity = 188/364 (51.65%), Postives = 233/364 (64.01%), Query Frame = 0
BLAST of HG10009435 vs. NCBI nr
Match: XP_022958521.1 (uncharacterized protein LOC111459727 [Cucurbita moschata]) HSP 1 Score: 240.4 bits (612), Expect = 3.5e-59 Identity = 208/528 (39.39%), Postives = 254/528 (48.11%), Query Frame = 0
BLAST of HG10009435 vs. NCBI nr
Match: KAG6605686.1 (hypothetical protein SDJN03_03003, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 226.1 bits (575), Expect = 6.9e-55 Identity = 202/530 (38.11%), Postives = 254/530 (47.92%), Query Frame = 0
BLAST of HG10009435 vs. ExPASy TrEMBL
Match: A0A0A0KNC2 (VARLMGL domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G172790 PE=4 SV=1) HSP 1 Score: 443.0 bits (1138), Expect = 1.7e-120 Identity = 313/543 (57.64%), Postives = 363/543 (66.85%), Query Frame = 0
BLAST of HG10009435 vs. ExPASy TrEMBL
Match: A0A5D3BMU7 (Putative dna repair OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00570 PE=4 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 6.7e-64 Identity = 188/364 (51.65%), Postives = 233/364 (64.01%), Query Frame = 0
BLAST of HG10009435 vs. ExPASy TrEMBL
Match: A0A6J1H2A5 (uncharacterized protein LOC111459727 OS=Cucurbita moschata OX=3662 GN=LOC111459727 PE=4 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 1.7e-59 Identity = 208/528 (39.39%), Postives = 254/528 (48.11%), Query Frame = 0
BLAST of HG10009435 vs. ExPASy TrEMBL
Match: A0A5B6YJQ9 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_001389 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 4.7e-33 Identity = 207/709 (29.20%), Postives = 294/709 (41.47%), Query Frame = 0
BLAST of HG10009435 vs. ExPASy TrEMBL
Match: A0A7J9JMK9 (Uncharacterized protein OS=Gossypium armourianum OX=34283 GN=Goarm_007667 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 4.0e-32 Identity = 209/699 (29.90%), Postives = 301/699 (43.06%), Query Frame = 0
BLAST of HG10009435 vs. TAIR 10
Match: AT5G51850.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62170.1); Has 384 Blast hits to 375 proteins in 79 species: Archae - 0; Bacteria - 14; Metazoa - 135; Fungi - 31; Plants - 92; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). ) HSP 1 Score: 68.9 bits (167), Expect = 1.3e-11 Identity = 112/405 (27.65%), Postives = 181/405 (44.69%), Query Frame = 0
BLAST of HG10009435 vs. TAIR 10
Match: AT5G62170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G51850.1); Has 381 Blast hits to 359 proteins in 81 species: Archae - 0; Bacteria - 16; Metazoa - 101; Fungi - 21; Plants - 99; Viruses - 3; Other Eukaryotes - 141 (source: NCBI BLink). ) HSP 1 Score: 68.6 bits (166), Expect = 1.7e-11 Identity = 111/406 (27.34%), Postives = 173/406 (42.61%), Query Frame = 0
BLAST of HG10009435 vs. TAIR 10
Match: AT4G25430.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G51850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 60.5 bits (145), Expect = 4.7e-09 Identity = 108/443 (24.38%), Postives = 176/443 (39.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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