HG10009428 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10009428
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Mannan endo-1,4-beta-mannosidase
Location	Chr06: 5760663 .. 5761439 (+)
RNA-Seq Expression	HG10009428
Synteny	HG10009428

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGGGCAACAATTGAAAAACATTTCTTTAGTTTGTGTTTTTGTGTTGTTAACTTTTAAAACCTATTCATTGCCTCTTTCAACCAATGGAAGATGGATCGTCGATGCCACAACAGGCCAACGTGTGAAGTTAATGTGCGTAAATTGGCCAGGGCACATGCAGGCTATGTTGGCAGAAGGTCTTCATCTCAGGCCGCTTAATGATATCATTGCCTTGGTAGCGAAGTTGCGGTTCAATTGCGTGCGTTTGACATACTCAATTCATATGTTCACACGCCATGCCAATTTGACTGTTCAACAATCCTTTGAGAATTTTGATATGAAGGATGCCATGGCAGGCATAGCTCAAAACAATCCTTCTATATTGAACATGACACTCGTTGAGGCGTATGAAGCAGTGATTGATTCACTTGCTACACATGGGATCATGGTAGTTTCTGATAATCATATAAGTCAGCCAAGATGGTGTTGTGATGATAATGATGGCAATGGCTTCTTTGGAGATCGGTATTTGGATCCTCAAGAATGGCTCGAAGGAATCAGTTTGGCAGCACAAAGCCTAAAAAGCAAATCACAAGTATGTTTTCTTTTTATGAAGATTTTTAAAAACTATAGGTTACAGATTTATACGATATATCACAGATTTATACAATATGCTAACCATTTCCATGATAATATATATGTAAAATGTGGTAGCAATGAGCTTGAGAAACGAACTGCAAGGACCAAACCAAAACGTGGAGAAGTGGTTTCAATACACGAGCCAAGGAGCTAA

mRNA sequence

ATGACAGGGCAACAATTGAAAAACATTTCTTTAGTTTGTGTTTTTGTGTTGTTAACTTTTAAAACCTATTCATTGCCTCTTTCAACCAATGGAAGATGGATCGTCGATGCCACAACAGGCCAACGTGTGAAGTTAATGTGCGTAAATTGGCCAGGGCACATGCAGGCTATGTTGGCAGAAGGTCTTCATCTCAGGCCGCTTAATGATATCATTGCCTTGGTAGCGAAGTTGCGGTTCAATTGCGTGCGTTTGACATACTCAATTCATATGTTCACACGCCATGCCAATTTGACTGTTCAACAATCCTTTGAGAATTTTGATATGAAGGATGCCATGGCAGGCATAGCTCAAAACAATCCTTCTATATTGAACATGACACTCGTTGAGGCGTATGAAGCAGTGATTGATTCACTTGCTACACATGGGATCATGGTAGTTTCTGATAATCATATAAGTCAGCCAAGATGGTGTTGTGATGATAATGATGGCAATGGCTTCTTTGGAGATCGGTATTTGGATCCTCAAGAATGGCTCGAAGGAATCAGTTTGGCAGCACAAAGCCTAAAAAGCAAATCACAAATTTATACGATATATCACAGATTTATACAATATGCTAACCATTTCCATGATAATATATATGTAAAATGTGGTAGCAATGAGCTTGAGAAACGAACTGCAAGGACCAAACCAAAACGTGGAGAAGTGGTTTCAATACACGAGCCAAGGAGCTAA

Coding sequence (CDS)

ATGACAGGGCAACAATTGAAAAACATTTCTTTAGTTTGTGTTTTTGTGTTGTTAACTTTTAAAACCTATTCATTGCCTCTTTCAACCAATGGAAGATGGATCGTCGATGCCACAACAGGCCAACGTGTGAAGTTAATGTGCGTAAATTGGCCAGGGCACATGCAGGCTATGTTGGCAGAAGGTCTTCATCTCAGGCCGCTTAATGATATCATTGCCTTGGTAGCGAAGTTGCGGTTCAATTGCGTGCGTTTGACATACTCAATTCATATGTTCACACGCCATGCCAATTTGACTGTTCAACAATCCTTTGAGAATTTTGATATGAAGGATGCCATGGCAGGCATAGCTCAAAACAATCCTTCTATATTGAACATGACACTCGTTGAGGCGTATGAAGCAGTGATTGATTCACTTGCTACACATGGGATCATGGTAGTTTCTGATAATCATATAAGTCAGCCAAGATGGTGTTGTGATGATAATGATGGCAATGGCTTCTTTGGAGATCGGTATTTGGATCCTCAAGAATGGCTCGAAGGAATCAGTTTGGCAGCACAAAGCCTAAAAAGCAAATCACAAATTTATACGATATATCACAGATTTATACAATATGCTAACCATTTCCATGATAATATATATGTAAAATGTGGTAGCAATGAGCTTGAGAAACGAACTGCAAGGACCAAACCAAAACGTGGAGAAGTGGTTTCAATACACGAGCCAAGGAGCTAA

Protein sequence

MTGQQLKNISLVCVFVLLTFKTYSLPLSTNGRWIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIIALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMAGIAQNNPSILNMTLVEAYEAVIDSLATHGIMVVSDNHISQPRWCCDDNDGNGFFGDRYLDPQEWLEGISLAAQSLKSKSQIYTIYHRFIQYANHFHDNIYVKCGSNELEKRTARTKPKRGEVVSIHEPRS

Homology

[Close]

BLAST of HG10009428 vs. NCBI nr
Match: KGN50395.1 (hypothetical protein Csa_000438 [Cucumis sativus])

HSP 1 Score: 359.0 bits (920), Expect = 3.2e-95
Identity = 169/197 (85.79%), Postives = 186/197 (94.42%), Query Frame = 0


Query: 4   QQLKNISLVCVFVLLTFKTYSLPLSTNGRWIVDATTGQRVKLMCVNWPGHMQAMLAEGLH 63
           QQ KNI+LVCVFVLLTFK YSLPLSTNGRWIVDATTGQRVKLMCVNWPGHMQ MLAEGLH
Sbjct: 5   QQWKNIALVCVFVLLTFKAYSLPLSTNGRWIVDATTGQRVKLMCVNWPGHMQGMLAEGLH 64

Query: 64  LRPLNDIIALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMAGIAQNNPSIL 123
            RPL+DII+LVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMAGIAQNNPS++
Sbjct: 65  RRPLDDIISLVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMAGIAQNNPSLV 124

Query: 124 NMTLVEAYEAVIDSLATHGIMVVSDNHISQPRWCCDDNDGNGFFGDRYLDPQEWLEGISL 183
           N+TLVEAY AV+DSLA HG+MVVSDNHISQPRWCC+++DGNGFFGDRY DP+EWL+GISL
Sbjct: 125 NLTLVEAYGAVVDSLAAHGVMVVSDNHISQPRWCCNNDDGNGFFGDRYFDPEEWLQGISL 184

Query: 184 AAQSLKSKSQIYTIYHR 201
           AAQSLKSK+++  +  R
Sbjct: 185 AAQSLKSKAEVVAMSMR 201

[Close]

BLAST of HG10009428 vs. NCBI nr
Match: XP_038874277.1 (glycosyl hydrolase 5 family protein-like [Benincasa hispida])

HSP 1 Score: 355.1 bits (910), Expect = 4.7e-94
Identity = 166/194 (85.57%), Postives = 183/194 (94.33%), Query Frame = 0


Query: 1   MTGQQLKNISLVCVFVLLTFKTYSLPLSTNGRWIVDATTGQRVKLMCVNWPGHMQAMLAE 60
           MT  Q KNI+LVC+FVLLTFK YSLPLSTNGRWIVDA TGQR+KLMCVNWPGHMQ MLAE
Sbjct: 1   MTKHQWKNIALVCIFVLLTFKAYSLPLSTNGRWIVDAATGQRMKLMCVNWPGHMQVMLAE 60

Query: 61  GLHLRPLNDIIALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMAGIAQNNP 120
           GLHLRPL+DI  LVAKLRFNCVRLTYSIHMFTR+ANLTVQQSFENFD+K+AMAGIA+NNP
Sbjct: 61  GLHLRPLDDIAVLVAKLRFNCVRLTYSIHMFTRYANLTVQQSFENFDLKEAMAGIARNNP 120

Query: 121 SILNMTLVEAYEAVIDSLATHGIMVVSDNHISQPRWCCDDNDGNGFFGDRYLDPQEWLEG 180
           SILNMTL+EAY+AV+DSLA HG+MVVSDNHISQPRWCC+++DGNGFFGDRY DPQEWL+G
Sbjct: 121 SILNMTLIEAYKAVVDSLAVHGVMVVSDNHISQPRWCCNNDDGNGFFGDRYFDPQEWLQG 180

Query: 181 ISLAAQSLKSKSQI 195
           ISLAAQSLKSK Q+
Sbjct: 181 ISLAAQSLKSKFQV 194

[Close]

BLAST of HG10009428 vs. NCBI nr
Match: TYK00314.1 (endoglucanase-like [Cucumis melo var. makuwa])

HSP 1 Score: 350.1 bits (897), Expect = 1.5e-92
Identity = 170/196 (86.73%), Postives = 181/196 (92.35%), Query Frame = 0


Query: 1   MTGQ-QLKNISLVCVFV-LLTFKTYSLPLSTNGRWIVDATTGQRVKLMCVNWPGHMQAML 60
           M GQ Q KNI+LVCVFV LLTFK +SLPLSTNGRWI+DATTGQRVKLMCVNW GHMQ ML
Sbjct: 1   MKGQHQRKNIALVCVFVLLLTFKAFSLPLSTNGRWIIDATTGQRVKLMCVNWAGHMQGML 60

Query: 61  AEGLHLRPLNDIIALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMAGIAQN 120
            EGLH RPL+DI ALVAKLRFNCVRLTYSIHMFTRHANLTV+QSFENFDMKDAMAGIAQN
Sbjct: 61  VEGLHRRPLDDIAALVAKLRFNCVRLTYSIHMFTRHANLTVKQSFENFDMKDAMAGIAQN 120

Query: 121 NPSILNMTLVEAYEAVIDSLATHGIMVVSDNHISQPRWCCDDNDGNGFFGDRYLDPQEWL 180
           NPSILN+TLVEAY AV+DSL  HGIMVVSDNHISQPRWCCD+NDGNGFFGDRY DPQEW 
Sbjct: 121 NPSILNLTLVEAYGAVVDSLVAHGIMVVSDNHISQPRWCCDNNDGNGFFGDRYFDPQEWF 180

Query: 181 EGISLAAQSLKSKSQI 195
           +GISLAAQSLKSK+Q+
Sbjct: 181 QGISLAAQSLKSKAQV 196

[Close]

BLAST of HG10009428 vs. NCBI nr
Match: XP_008467257.1 (PREDICTED: endoglucanase-like [Cucumis melo])

HSP 1 Score: 350.1 bits (897), Expect = 1.5e-92
Identity = 170/196 (86.73%), Postives = 182/196 (92.86%), Query Frame = 0


Query: 1   MTGQ-QLKNISLVCVFV-LLTFKTYSLPLSTNGRWIVDATTGQRVKLMCVNWPGHMQAML 60
           M GQ Q KNI+LVCVFV LLTFK +SLPLSTNGRWI+DATTG+RVKLMCVNW GHMQ ML
Sbjct: 1   MKGQHQRKNIALVCVFVLLLTFKAFSLPLSTNGRWIIDATTGRRVKLMCVNWAGHMQGML 60

Query: 61  AEGLHLRPLNDIIALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMAGIAQN 120
            EGLH RPL+DI ALVAKLRFNCVRLTYSIHMFTRHANLTV+QSFENFDMKDAMAGIAQN
Sbjct: 61  VEGLHRRPLDDIAALVAKLRFNCVRLTYSIHMFTRHANLTVKQSFENFDMKDAMAGIAQN 120

Query: 121 NPSILNMTLVEAYEAVIDSLATHGIMVVSDNHISQPRWCCDDNDGNGFFGDRYLDPQEWL 180
           NPSILN+TLVEAY AV+DSL  HGIMVVSDNHISQPRWCCD+NDGNGFFGDRY DPQEWL
Sbjct: 121 NPSILNLTLVEAYGAVVDSLVAHGIMVVSDNHISQPRWCCDNNDGNGFFGDRYFDPQEWL 180

Query: 181 EGISLAAQSLKSKSQI 195
           +GISLAAQSLKSK+Q+
Sbjct: 181 QGISLAAQSLKSKAQV 196

[Close]

BLAST of HG10009428 vs. NCBI nr
Match: KAA0055148.1 (endoglucanase-like [Cucumis melo var. makuwa])

HSP 1 Score: 350.1 bits (897), Expect = 1.5e-92
Identity = 170/196 (86.73%), Postives = 181/196 (92.35%), Query Frame = 0


Query: 1   MTGQ-QLKNISLVCVFV-LLTFKTYSLPLSTNGRWIVDATTGQRVKLMCVNWPGHMQAML 60
           M GQ Q KNI+LVCVFV LLTFK +SLPLSTNGRWI+DATTGQRVKLMCVNW GHMQ ML
Sbjct: 1   MKGQHQRKNIALVCVFVLLLTFKAFSLPLSTNGRWIIDATTGQRVKLMCVNWAGHMQGML 60

Query: 61  AEGLHLRPLNDIIALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMAGIAQN 120
            EGLH RPL+DI ALVAKLRFNCVRLTYSIHMFTRHANLTV+QSFENFDMKDAMAGIAQN
Sbjct: 61  VEGLHRRPLDDIAALVAKLRFNCVRLTYSIHMFTRHANLTVKQSFENFDMKDAMAGIAQN 120

Query: 121 NPSILNMTLVEAYEAVIDSLATHGIMVVSDNHISQPRWCCDDNDGNGFFGDRYLDPQEWL 180
           NPSILN+TLVEAY AV+DSL  HGIMVVSDNHISQPRWCCD+NDGNGFFGDRY DPQEW 
Sbjct: 121 NPSILNLTLVEAYGAVVDSLVAHGIMVVSDNHISQPRWCCDNNDGNGFFGDRYFDPQEWF 180

Query: 181 EGISLAAQSLKSKSQI 195
           +GISLAAQSLKSK+Q+
Sbjct: 181 QGISLAAQSLKSKAQV 196

[Close]

BLAST of HG10009428 vs. ExPASy Swiss-Prot
Match: C0HLA0 (Glycosyl hydrolase 5 family protein OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 6.9e-48
Identity = 88/174 (50.57%), Postives = 121/174 (69.54%), Query Frame = 0


Query: 14  VFVLLTFKTYSLPLSTNGRWIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIIAL 73
           + +L+   ++SLPL T GRWIVD  TG RVKL CVNW GH++  L EGL+  P+  +   
Sbjct: 18  LLLLVAAPSHSLPLLTRGRWIVDEATGLRVKLACVNWVGHLEPGLPEGLNRLPVATVAHT 77

Query: 74  VAKLRFNCVRLTYSIHMFTR--HANLTVQQSFENFDMKDAMAGIAQNNPSILNMTLVEAY 133
           ++ L FNCVRLTYSIHM TR  + N TV Q+F   ++ +A +GI  NNP +L++  V AY
Sbjct: 78  ISSLGFNCVRLTYSIHMLTRTSYTNATVAQTFARLNLTEAASGIEHNNPELLDLGHVAAY 137

Query: 134 EAVIDSLATHGIMVVSDNHISQPRWCCDDNDGNGFFGDRYLDPQEWLEGISLAA 186
             V+ +L+  G+MV+ DNH+S+P+WCC  +DGNGFFGDRY +P  W+EG+ L A
Sbjct: 138 HHVVAALSEAGVMVILDNHVSKPKWCCAVDDGNGFFGDRYFNPNTWVEGLGLMA 191

[Close]

BLAST of HG10009428 vs. ExPASy TrEMBL
Match: A0A0A0KL32 (Mannan endo-1,4-beta-mannosidase OS=Cucumis sativus OX=3659 GN=Csa_5G171770 PE=3 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.6e-95
Identity = 169/197 (85.79%), Postives = 186/197 (94.42%), Query Frame = 0


Query: 4   QQLKNISLVCVFVLLTFKTYSLPLSTNGRWIVDATTGQRVKLMCVNWPGHMQAMLAEGLH 63
           QQ KNI+LVCVFVLLTFK YSLPLSTNGRWIVDATTGQRVKLMCVNWPGHMQ MLAEGLH
Sbjct: 5   QQWKNIALVCVFVLLTFKAYSLPLSTNGRWIVDATTGQRVKLMCVNWPGHMQGMLAEGLH 64

Query: 64  LRPLNDIIALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMAGIAQNNPSIL 123
            RPL+DII+LVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMAGIAQNNPS++
Sbjct: 65  RRPLDDIISLVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMAGIAQNNPSLV 124

Query: 124 NMTLVEAYEAVIDSLATHGIMVVSDNHISQPRWCCDDNDGNGFFGDRYLDPQEWLEGISL 183
           N+TLVEAY AV+DSLA HG+MVVSDNHISQPRWCC+++DGNGFFGDRY DP+EWL+GISL
Sbjct: 125 NLTLVEAYGAVVDSLAAHGVMVVSDNHISQPRWCCNNDDGNGFFGDRYFDPEEWLQGISL 184

Query: 184 AAQSLKSKSQIYTIYHR 201
           AAQSLKSK+++  +  R
Sbjct: 185 AAQSLKSKAEVVAMSMR 201

[Close]

BLAST of HG10009428 vs. ExPASy TrEMBL
Match: A0A5D3BM14 (Mannan endo-1,4-beta-mannosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00610 PE=3 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 7.3e-93
Identity = 170/196 (86.73%), Postives = 181/196 (92.35%), Query Frame = 0


Query: 1   MTGQ-QLKNISLVCVFV-LLTFKTYSLPLSTNGRWIVDATTGQRVKLMCVNWPGHMQAML 60
           M GQ Q KNI+LVCVFV LLTFK +SLPLSTNGRWI+DATTGQRVKLMCVNW GHMQ ML
Sbjct: 1   MKGQHQRKNIALVCVFVLLLTFKAFSLPLSTNGRWIIDATTGQRVKLMCVNWAGHMQGML 60

Query: 61  AEGLHLRPLNDIIALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMAGIAQN 120
            EGLH RPL+DI ALVAKLRFNCVRLTYSIHMFTRHANLTV+QSFENFDMKDAMAGIAQN
Sbjct: 61  VEGLHRRPLDDIAALVAKLRFNCVRLTYSIHMFTRHANLTVKQSFENFDMKDAMAGIAQN 120

Query: 121 NPSILNMTLVEAYEAVIDSLATHGIMVVSDNHISQPRWCCDDNDGNGFFGDRYLDPQEWL 180
           NPSILN+TLVEAY AV+DSL  HGIMVVSDNHISQPRWCCD+NDGNGFFGDRY DPQEW 
Sbjct: 121 NPSILNLTLVEAYGAVVDSLVAHGIMVVSDNHISQPRWCCDNNDGNGFFGDRYFDPQEWF 180

Query: 181 EGISLAAQSLKSKSQI 195
           +GISLAAQSLKSK+Q+
Sbjct: 181 QGISLAAQSLKSKAQV 196

[Close]

BLAST of HG10009428 vs. ExPASy TrEMBL
Match: A0A5A7UJG7 (Mannan endo-1,4-beta-mannosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00790 PE=3 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 7.3e-93
Identity = 170/196 (86.73%), Postives = 181/196 (92.35%), Query Frame = 0


Query: 1   MTGQ-QLKNISLVCVFV-LLTFKTYSLPLSTNGRWIVDATTGQRVKLMCVNWPGHMQAML 60
           M GQ Q KNI+LVCVFV LLTFK +SLPLSTNGRWI+DATTGQRVKLMCVNW GHMQ ML
Sbjct: 1   MKGQHQRKNIALVCVFVLLLTFKAFSLPLSTNGRWIIDATTGQRVKLMCVNWAGHMQGML 60

Query: 61  AEGLHLRPLNDIIALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMAGIAQN 120
            EGLH RPL+DI ALVAKLRFNCVRLTYSIHMFTRHANLTV+QSFENFDMKDAMAGIAQN
Sbjct: 61  VEGLHRRPLDDIAALVAKLRFNCVRLTYSIHMFTRHANLTVKQSFENFDMKDAMAGIAQN 120

Query: 121 NPSILNMTLVEAYEAVIDSLATHGIMVVSDNHISQPRWCCDDNDGNGFFGDRYLDPQEWL 180
           NPSILN+TLVEAY AV+DSL  HGIMVVSDNHISQPRWCCD+NDGNGFFGDRY DPQEW 
Sbjct: 121 NPSILNLTLVEAYGAVVDSLVAHGIMVVSDNHISQPRWCCDNNDGNGFFGDRYFDPQEWF 180

Query: 181 EGISLAAQSLKSKSQI 195
           +GISLAAQSLKSK+Q+
Sbjct: 181 QGISLAAQSLKSKAQV 196

[Close]

BLAST of HG10009428 vs. ExPASy TrEMBL
Match: A0A1S3CT43 (Mannan endo-1,4-beta-mannosidase OS=Cucumis melo OX=3656 GN=LOC103504654 PE=3 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 7.3e-93
Identity = 170/196 (86.73%), Postives = 182/196 (92.86%), Query Frame = 0


Query: 1   MTGQ-QLKNISLVCVFV-LLTFKTYSLPLSTNGRWIVDATTGQRVKLMCVNWPGHMQAML 60
           M GQ Q KNI+LVCVFV LLTFK +SLPLSTNGRWI+DATTG+RVKLMCVNW GHMQ ML
Sbjct: 1   MKGQHQRKNIALVCVFVLLLTFKAFSLPLSTNGRWIIDATTGRRVKLMCVNWAGHMQGML 60

Query: 61  AEGLHLRPLNDIIALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMAGIAQN 120
            EGLH RPL+DI ALVAKLRFNCVRLTYSIHMFTRHANLTV+QSFENFDMKDAMAGIAQN
Sbjct: 61  VEGLHRRPLDDIAALVAKLRFNCVRLTYSIHMFTRHANLTVKQSFENFDMKDAMAGIAQN 120

Query: 121 NPSILNMTLVEAYEAVIDSLATHGIMVVSDNHISQPRWCCDDNDGNGFFGDRYLDPQEWL 180
           NPSILN+TLVEAY AV+DSL  HGIMVVSDNHISQPRWCCD+NDGNGFFGDRY DPQEWL
Sbjct: 121 NPSILNLTLVEAYGAVVDSLVAHGIMVVSDNHISQPRWCCDNNDGNGFFGDRYFDPQEWL 180

Query: 181 EGISLAAQSLKSKSQI 195
           +GISLAAQSLKSK+Q+
Sbjct: 181 QGISLAAQSLKSKAQV 196

[Close]

BLAST of HG10009428 vs. ExPASy TrEMBL
Match: A0A5D3CGT4 (Mannan endo-1,4-beta-mannosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold66G00030 PE=3 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 8.0e-92
Identity = 165/192 (85.94%), Postives = 179/192 (93.23%), Query Frame = 0


Query: 4   QQLKNISLVCVFV-LLTFKTYSLPLSTNGRWIVDATTGQRVKLMCVNWPGHMQAMLAEGL 63
           QQ KNI+LVCVFV LLTFK YSLPLSTNGRWI+DATTG+RVKLMCVNW GHMQ ML EGL
Sbjct: 5   QQWKNIALVCVFVLLLTFKAYSLPLSTNGRWIIDATTGRRVKLMCVNWAGHMQGMLVEGL 64

Query: 64  HLRPLNDIIALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMAGIAQNNPSI 123
           H RPL+DI ALVAKLRFNCVRLTYSIHMFTRHAN+TV+QSFENFDMKDA+ GIAQNNPSI
Sbjct: 65  HRRPLDDIAALVAKLRFNCVRLTYSIHMFTRHANVTVKQSFENFDMKDALVGIAQNNPSI 124

Query: 124 LNMTLVEAYEAVIDSLATHGIMVVSDNHISQPRWCCDDNDGNGFFGDRYLDPQEWLEGIS 183
           LN+TLVEAY AV+DSLA HGIMVVSDNHISQPRWCCD++DGNGFFGDRY DPQEW +GIS
Sbjct: 125 LNLTLVEAYGAVVDSLAAHGIMVVSDNHISQPRWCCDNDDGNGFFGDRYFDPQEWFQGIS 184

Query: 184 LAAQSLKSKSQI 195
           LAAQSLKSK+Q+
Sbjct: 185 LAAQSLKSKAQV 196

[Close]

BLAST of HG10009428 vs. TAIR 10
Match: AT3G26130.1 (Cellulase (glycosyl hydrolase family 5) protein )

HSP 1 Score: 178.7 bits (452), Expect = 5.6e-45
Identity = 84/192 (43.75%), Postives = 127/192 (66.15%), Query Frame = 0


Query: 6   LKNISLVCVFVL-LTFKTYSLPLSTNGRWIV-DATTGQRVKLMCVNWPGHMQAMLAEGLH 65
           ++    + VF+L     T++ P ST+ RWIV D   G+RVKL CVNWP H++  +AEGL 
Sbjct: 1   MEKFFFISVFLLPYVITTFAFPPSTDSRWIVDDGNKGRRVKLTCVNWPSHLETAVAEGLS 60

Query: 66  LRPLNDIIALVAKLRFNCVRLTYSIHMFTRH---ANLTVQQSFENFDMKDAMAGIAQNNP 125
            +PL+ I   +  + FNCVRLT+ +++ T     A +TV+QS   F + +A++G   +NP
Sbjct: 61  KQPLDAIAEKIVSMGFNCVRLTWPLYLATDESFSAFMTVRQSLRKFRLFEAVSGFQTHNP 120

Query: 126 SILNMTLVEAYEAVIDSLATHGIMVVSDNHISQPRWCCDDNDGNGFFGDRYLDPQEWLEG 185
           +IL++ L++A++ V+  L  H +MV+ DNHISQP WCC DNDGNGFFGD++L+PQ W++G
Sbjct: 121 TILDLPLIKAFQEVVYCLEKHRVMVILDNHISQPGWCCSDNDGNGFFGDKHLNPQVWIKG 180

Query: 186 ISLAAQSLKSKS 193
           +   A    + S
Sbjct: 181 LKKMASMFANVS 192

[Close]

BLAST of HG10009428 vs. TAIR 10
Match: AT3G26140.1 (Cellulase (glycosyl hydrolase family 5) protein )

HSP 1 Score: 175.6 bits (444), Expect = 4.7e-44
Identity = 75/172 (43.60%), Postives = 115/172 (66.86%), Query Frame = 0


Query: 26  PLSTNGRWIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIIALVAKLRFNCVRLT 85
           PLSTN RWI+D   GQRVKL CVNWP H+Q ++AEGL  + ++D+   +  + FNCVR T
Sbjct: 4   PLSTNSRWIID-EKGQRVKLACVNWPSHLQPVVAEGLSKQSVDDLAKKIMAMGFNCVRFT 63

Query: 86  YSIHMFTRHA---NLTVQQSFENFDMKDAMAGIAQNNPSILNMTLVEAYEAVIDSLATHG 145
           + + + T      N+TV+QSF++  + D ++G    NPS++++ L+EAY+ V+  L  + 
Sbjct: 64  WPLDLATNETLANNVTVRQSFQSLGLNDDISGFETKNPSMIDLPLIEAYKKVVAKLGNNN 123

Query: 146 IMVVSDNHISQPRWCCDDNDGNGFFGDRYLDPQEWLEGISLAAQSLKSKSQI 195
           +MV+ DNH+++P WCC  NDGNGFFGD + DP  W+ G++  A + K  + +
Sbjct: 124 VMVILDNHVTKPGWCCGYNDGNGFFGDTFFDPTTWIAGLTKIAMTFKGATNV 174

[Close]

BLAST of HG10009428 vs. TAIR 10
Match: AT1G13130.1 (Cellulase (glycosyl hydrolase family 5) protein )

HSP 1 Score: 174.9 bits (442), Expect = 8.1e-44
Identity = 76/179 (42.46%), Postives = 118/179 (65.92%), Query Frame = 0


Query: 19  TFKTYSLPLSTNGRWIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIIALVAKLR 78
           T    S PLST+ RWIVD   G RVKL+C NWP H+Q ++AEGL  +P++ +   + ++ 
Sbjct: 27  TVPNMSYPLSTSSRWIVD-ENGLRVKLVCANWPSHLQPVVAEGLSKQPVDAVAKKIVEMG 86

Query: 79  FNCVRLTYSIHMFTRHA---NLTVQQSFENFDMKDAMAGIAQNNPSILNMTLVEAYEAVI 138
           FNCVRLT+ + + T      N+TV+QSF++  + D + G   NNPSI+++ L+EAY+ V+
Sbjct: 87  FNCVRLTWPLDLMTNETLANNVTVRQSFQSLGLNDDIVGFQTNNPSIIDLPLIEAYKTVV 146

Query: 139 DSLATHGIMVVSDNHISQPRWCCDDNDGNGFFGDRYLDPQEWLEGISLAAQSLKSKSQI 195
            +L  + +MV+ DNH+++P WCC ++DGNGFFGD++ DP  W+  +   A +    S +
Sbjct: 147 TTLGNNDVMVILDNHLTKPGWCCANDDGNGFFGDQFFDPTVWVAALKKMAATFNGVSNV 204

[Close]

BLAST of HG10009428 vs. TAIR 10
Match: AT5G16700.1 (Glycosyl hydrolase superfamily protein )

HSP 1 Score: 159.8 bits (403), Expect = 2.7e-39
Identity = 79/188 (42.02%), Postives = 117/188 (62.23%), Query Frame = 0


Query: 11  LVCVFVLLTFK-TYSLPLSTNGRWIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLND 70
           L  +F+  T K T S PLST  RWIVD   GQRVKL CVNWP H+Q  +AEGL  +PL+ 
Sbjct: 9   LFFLFISSTSKLTTSYPLSTKSRWIVD-EKGQRVKLACVNWPAHLQPTVAEGLSKQPLDS 68

Query: 71  IIALVAKLRFNCVRLTYSIHMFTRHA---NLTVQQSFENFDMKDAMAGIAQNNPSILNMT 130
           I   +  + FNCVRLT+ + + T       +TV+QSFE+  + + + GI  +NP +L++ 
Sbjct: 69  ISKKIVSMGFNCVRLTWPLDLVTNDTLALKVTVKQSFESLKLFEDVLGIQTHNPKLLHLP 128

Query: 131 LVEAYEAVIDSLATHGIMVVSDNHISQPRWCCDDNDGNGFFGDRYLDPQEWLEGISLAAQ 190
           L  A++ V+ +L  +G+MV+ DNH++ P WCC DND + FFG  + DP  W +G+   A 
Sbjct: 129 LFNAFQEVVSNLGENGVMVILDNHLTTPGWCCGDNDLDAFFGYPHFDPLVWAKGLRKMAT 188

Query: 191 SLKSKSQI 195
             ++ + +
Sbjct: 189 LFRNFTHV 195

[Close]

BLAST of HG10009428 vs. TAIR 10
Match: AT5G17500.1 (Glycosyl hydrolase superfamily protein )

HSP 1 Score: 146.0 bits (367), Expect = 4.0e-35
Identity = 72/181 (39.78%), Postives = 110/181 (60.77%), Query Frame = 0


Query: 12  VCVFVLLTFKTYSL----PLSTNGRWIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPL 71
           V +F+ L+  + +L    PL T  RWIV+   G RVKL C NWP H++ ++AEGL  +P+
Sbjct: 9   VFLFLFLSLISLTLATDYPLFTKSRWIVN-NKGHRVKLACANWPSHLKPVVAEGLSSQPM 68

Query: 72  NDIIALVAKLRFNCVRLTYSIHMF---TRHANLTVQQSFENFDMKDAMAGIAQNNPSILN 131
           + I   +  + FNCVRLT+ + +    T   N+TV+QSFE + +   + GI  +NP I+N
Sbjct: 69  DSISKKIKDMGFNCVRLTWPLELMINDTLAFNVTVKQSFERYGLDHELQGIYTHNPYIVN 128

Query: 132 MTLVEAYEAVIDSLATHGIMVVSDNHISQPRWCCDDNDGNGFFGDRYLDPQEWLEGISLA 186
             L+  ++AV+ SL  H +MV+ DNH + P WCC ++D + FFGD   +P  W+ G+   
Sbjct: 129 TPLINVFQAVVYSLGRHDVMVILDNHKTVPGWCCSNDDPDAFFGDPKFNPDLWMLGLKKM 188

The following BLAST results are available for this feature:

BLAST of HG10009428 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN50395.1	3.2e-95	85.79	hypothetical protein Csa_000438 [Cucumis sativus]	[more]
XP_038874277.1	4.7e-94	85.57	glycosyl hydrolase 5 family protein-like [Benincasa hispida]	[more]
TYK00314.1	1.5e-92	86.73	endoglucanase-like [Cucumis melo var. makuwa]	[more]
XP_008467257.1	1.5e-92	86.73	PREDICTED: endoglucanase-like [Cucumis melo]	[more]
KAA0055148.1	1.5e-92	86.73	endoglucanase-like [Cucumis melo var. makuwa]	[more]

BLAST of HG10009428 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C0HLA0	6.9e-48	50.57	Glycosyl hydrolase 5 family protein OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1	[more]

BLAST of HG10009428 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KL32	1.6e-95	85.79	Mannan endo-1,4-beta-mannosidase OS=Cucumis sativus OX=3659 GN=Csa_5G171770 PE=3...	[more]
A0A5D3BM14	7.3e-93	86.73	Mannan endo-1,4-beta-mannosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A5A7UJG7	7.3e-93	86.73	Mannan endo-1,4-beta-mannosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3CT43	7.3e-93	86.73	Mannan endo-1,4-beta-mannosidase OS=Cucumis melo OX=3656 GN=LOC103504654 PE=3 SV...	[more]
A0A5D3CGT4	8.0e-92	85.94	Mannan endo-1,4-beta-mannosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of HG10009428 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G26130.1	5.6e-45	43.75	Cellulase (glycosyl hydrolase family 5) protein	[more]
AT3G26140.1	4.7e-44	43.60	Cellulase (glycosyl hydrolase family 5) protein	[more]
AT1G13130.1	8.1e-44	42.46	Cellulase (glycosyl hydrolase family 5) protein	[more]
AT5G16700.1	2.7e-39	42.02	Glycosyl hydrolase superfamily protein	[more]
AT5G17500.1	4.0e-35	39.78	Glycosyl hydrolase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 25..198 e-value: 2.3E-29 score: 104.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..243
None	No IPR available	PANTHER	PTHR31263:SF0	CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560)	coord: 7..198
None	No IPR available	PANTHER	PTHR31263	CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560)	coord: 7..198
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 26..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10009428.1	HG10009428.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071704	organic substance metabolic process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0016985	mannan endo-1,4-beta-mannosidase activity