HG10009404 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10009404
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ADP-ribosylation factor-like
Location	Chr06: 5543711 .. 5546182 (-)
RNA-Seq Expression	HG10009404
Synteny	HG10009404

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGATTTATGTGGTGGACTCCTTGGACCGAGAGAGAATTGGGAAGGCAAAAACAGAATTTCAGGTTATAGCCCTAGGCGCATTGTGCATTTAAGTATGGCATTGTGGGCAACCTTTGTTTGCTGATATGTAATATTTCTTTCAGGCCATCATTAACGACCCATTTATGCTGAACAGCGTCATATTGGTCTTTGCGAATAAGCAGGATATGGTATGTAAATCTCATCTTCTTCTGTTACATACTGTGGAAACAATTAATGTTTTATATCCATAATTTTTTTTTATATATTTGGGATTGGGAAGACAAAAGATCAACTCTTTTTTTTTTGAACAAGAGATAAGAGATCAACTCTTCAACCTGCTCCCTTTCACACACTCACACTACTGTGCAAAGTACGTGGTGCTTATGCTGTAAAGGTCTGAGCTAGTCGTAATATTAGTATTTTTCCTCTCTTTGAAATACACATTTTCATATAAAAACAAAGGTTAGTTTCTAACAAGCCCAAGTTGTGAAAAGGGCCTGTAACTGACGTGAATAGTGGATAAGAATATTACATACTGAGTATTTGATATTCATATGGACAGTTGGTTTTATTTTAGAATTATGAATACTTTTAGGTTTTGTTTCGAATGTATTTTTAGTAATCTTAAAAATCAGGTCCTTAAATTTGTTATAAAAAATAGCAGAAATGTTTTCCTACTTGAAGAGGACGAAGAATTGGTAATAGAAAATTGTCTACCTTGTTGGTGATGAAGGGCATAAGGTAGATTATGTGATCTAGAGATTGCTTCTAGCCCCTCAAGTCTGTGTCTAATCGCGTTTGTTTCATCCCAATCTCAAAAAACATATTGTGAATGGTAGGGTCGAACATTAGATTCTTTTCATTTTATCAATGAAAAGTTTCATTTCTTATTAGCAATATATATAGACAGCTAGATAGCGGTTAAAGCCAGTTCTTGAAGCCATAAGACACCAGCCTAGTCCATGAAAAGAAGGGTGAATACTGAATAATGAAAGGTGAAGTTGATATTGGGCCATTAGCAATTGTAAACTTATATAAAGATCAGATAGCTTTTGAATTAAAATGGTCTCTTGCCTGATTAAGTCATCATATTAGGTCGCACATACCCCATAACAATATCATGTCCAAGATAGCTTTTTGGCTGCAAATTATCCGTTAATGAAAAGGATCCAAAGGAGATAGATGAATCGAGTTAAATCATTATACCAAAGGGATGCAGACTTTGGAAGCTTAAATTTTTTTACTTGGTTGGTTAATCCTAAGAAGATTAAGGGTCTGTTTGGCAGACCTTCTCAATGAAACTTTTTTTTAAAAAAAAATTCAATGAAAATGTTGCATTTATTCAAAATTATTAAATGACAAATTTGTTTGGTTGCACTCTGAATATGTTTTTATTTCTGACCACATTGAAGATTTTTGGTTAGTCACTTCAAAGTTGTTTTTGGATAATCCATCTTTCACGTGTTTCTTTAAAAAAAAAGTTTTTATATTAATCCAATTTTCTTAACTACGTATTTATTAAGTTTTTTCTTAAAATAAACCAATTTTGATCCTCTAAAATCACTCAATAAGCTATATTAAACACTTAAAAAAATTATTAAAGTTTAAAGGTGCTTGTTGAAAAATCAATTTTATTTAAAAAAACATTTTTTTCCAGTTATGCCAAACACACTATCACTATCACAGTGATTTTGACCAGGTTGTCTTCTATAGCCCTTGGGGTCTCGATGGTTTGTTTTGTGTATATGTGCATTAGAGGATTTGGAATTGGCTTCTTTACCATGGAGATATCAGTTTGTGGCTTTCATTTGAAATTAAGTCTCGGAGAATTTTGGTGTGAATTTGGCTCACACAACTTCTCATTTAACGTTGGAGTCTCCTTTCAGAATAAGAGAAAGGTTCTCTGGTGAGTTGCTATTCTGGTTATTTTGCGGAACATTTTGCTTCAGAAAAAGAGGAAAACTTTTTCGAGGGGAGGGTTCTTGAGTGGAAGTTTGGGCCTTATTAACCCATTTAAACCCCTCCCTTTTGGATGTTTATACATAGAGTTCCCTTCGTGTATAGCTCTTCACCACTGGAGCCTGCTACTGTTTTCTTTTTTCCTGCTCTCTCTTTCAACATGATTTTCTTTGCCTTGTTCATACTTCTCTTCTTTCGTCCAAGTTAGGTTTCTCATGCAATAGCAATAGTATCAACAATGAATTTGATGTTTTCTTAGATCATAGTAATGTAAGTTTGAATGATTTTGGTTGGTCCAGAAAGGAGCCATGACGCCAATGGAAGTATGTCAAGGACTAGGTCTATTTGATCTCAAACACAGAAAATGGCATATACAAGGAACGTGTGCACTCAGAGGAGATGGACTCTACGAGGGTTTAGACTGGTTAGCTGGAACTCTCAAGGAGATGAGAGCTGCTGGATATTCTTCAGTAGGAACATCATTTTAA

mRNA sequence

ATGCAGATTTATGTGGTGGACTCCTTGGACCGAGAGAGAATTGGGAAGGCAAAAACAGAATTTCAGGCCATCATTAACGACCCATTTATGCTGAACAGCGTCATATTGGTCTTTGCGAATAAGCAGGATATGAAAGGAGCCATGACGCCAATGGAAGTATGTCAAGGACTAGGTCTATTTGATCTCAAACACAGAAAATGGCATATACAAGGAACGTGTGCACTCAGAGGAGATGGACTCTACGAGGGTTTAGACTGGTTAGCTGGAACTCTCAAGGAGATGAGAGCTGCTGGATATTCTTCAGTAGGAACATCATTTTAA

Coding sequence (CDS)

ATGCAGATTTATGTGGTGGACTCCTTGGACCGAGAGAGAATTGGGAAGGCAAAAACAGAATTTCAGGCCATCATTAACGACCCATTTATGCTGAACAGCGTCATATTGGTCTTTGCGAATAAGCAGGATATGAAAGGAGCCATGACGCCAATGGAAGTATGTCAAGGACTAGGTCTATTTGATCTCAAACACAGAAAATGGCATATACAAGGAACGTGTGCACTCAGAGGAGATGGACTCTACGAGGGTTTAGACTGGTTAGCTGGAACTCTCAAGGAGATGAGAGCTGCTGGATATTCTTCAGTAGGAACATCATTTTAA

Protein sequence

MQIYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDLKHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF

Homology

[Close]

BLAST of HG10009404 vs. NCBI nr
Match: XP_038875942.1 (ADP-ribosylation factor-like [Benincasa hispida] >XP_038875943.1 ADP-ribosylation factor-like [Benincasa hispida])

HSP 1 Score: 218.8 bits (556), Expect = 2.3e-53
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 3   IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL 62
           IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL
Sbjct: 89  IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL 148

Query: 63  KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF 107
           KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF
Sbjct: 149 KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF 192

[Close]

BLAST of HG10009404 vs. NCBI nr
Match: KAG7017106.1 (ADP-ribosylation factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 218.8 bits (556), Expect = 2.3e-53
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 3   IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL 62
           IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL
Sbjct: 120 IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL 179

Query: 63  KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF 107
           KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF
Sbjct: 180 KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF 223

[Close]

BLAST of HG10009404 vs. NCBI nr
Match: XP_022929174.1 (ADP-ribosylation factor 1-like [Cucurbita moschata] >XP_022929175.1 ADP-ribosylation factor 1-like [Cucurbita moschata] >XP_023550578.1 ADP-ribosylation factor 1-like [Cucurbita pepo subsp. pepo] >XP_023550579.1 ADP-ribosylation factor 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 218.8 bits (556), Expect = 2.3e-53
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 3   IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL 62
           IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL
Sbjct: 89  IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL 148

Query: 63  KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF 107
           KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF
Sbjct: 149 KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF 192

[Close]

BLAST of HG10009404 vs. NCBI nr
Match: XP_008467293.1 (PREDICTED: ADP-ribosylation factor-like [Cucumis melo])

HSP 1 Score: 218.8 bits (556), Expect = 2.3e-53
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 3   IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL 62
           IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL
Sbjct: 89  IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL 148

Query: 63  KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF 107
           KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF
Sbjct: 149 KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF 192

[Close]

BLAST of HG10009404 vs. NCBI nr
Match: XP_022970138.1 (ADP-ribosylation factor-like [Cucurbita maxima] >XP_022970139.1 ADP-ribosylation factor-like [Cucurbita maxima])

HSP 1 Score: 216.9 bits (551), Expect = 8.7e-53
Identity = 103/104 (99.04%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 3   IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL 62
           IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAM PMEVCQGLGLFDL
Sbjct: 89  IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMAPMEVCQGLGLFDL 148

Query: 63  KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF 107
           KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF
Sbjct: 149 KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF 192

[Close]

BLAST of HG10009404 vs. ExPASy Swiss-Prot
Match: P91924 (ADP-ribosylation factor OS=Dugesia japonica OX=6161 PE=2 SV=3)

HSP 1 Score: 113.6 bits (283), Expect = 1.4e-24
Identity = 50/90 (55.56%), Postives = 67/90 (74.44%), Query Frame = 0


Query: 3   IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL 62
           I+VVDS DRER+ +A+ E   ++N+  + ++V+LVFANKQD+  AM P E+   LGL  L
Sbjct: 89  IFVVDSNDRERVNEAREELMRMLNEDELRDAVLLVFANKQDLPNAMNPAEITDKLGLHSL 148

Query: 63  KHRKWHIQGTCALRGDGLYEGLDWLAGTLK 93
           ++R W+IQ TCA  GDGLYEGLDWL+ TLK
Sbjct: 149 RNRSWYIQATCATSGDGLYEGLDWLSTTLK 178

[Close]

BLAST of HG10009404 vs. ExPASy Swiss-Prot
Match: Q5E9I6 (ADP-ribosylation factor 3 OS=Bos taurus OX=9913 GN=ARF3 PE=2 SV=3)

HSP 1 Score: 110.5 bits (275), Expect = 1.1e-23
Identity = 49/93 (52.69%), Postives = 65/93 (69.89%), Query Frame = 0


Query: 3   IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL 62
           I+VVDS DRER+ +A+ E   ++ +  + ++V+LVFANKQD+  AM   E+   LGL  L
Sbjct: 89  IFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL 148

Query: 63  KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMR 96
           +HR W+IQ TCA  GDGLYEGLDWLA  LK  +
Sbjct: 149 RHRNWYIQATCATSGDGLYEGLDWLANQLKNKK 181

[Close]

BLAST of HG10009404 vs. ExPASy Swiss-Prot
Match: P61204 (ADP-ribosylation factor 3 OS=Homo sapiens OX=9606 GN=ARF3 PE=1 SV=2)

HSP 1 Score: 110.5 bits (275), Expect = 1.1e-23
Identity = 49/93 (52.69%), Postives = 65/93 (69.89%), Query Frame = 0


Query: 3   IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL 62
           I+VVDS DRER+ +A+ E   ++ +  + ++V+LVFANKQD+  AM   E+   LGL  L
Sbjct: 89  IFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL 148

Query: 63  KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMR 96
           +HR W+IQ TCA  GDGLYEGLDWLA  LK  +
Sbjct: 149 RHRNWYIQATCATSGDGLYEGLDWLANQLKNKK 181

[Close]

BLAST of HG10009404 vs. ExPASy Swiss-Prot
Match: P61205 (ADP-ribosylation factor 3 OS=Mus musculus OX=10090 GN=Arf3 PE=2 SV=2)

HSP 1 Score: 110.5 bits (275), Expect = 1.1e-23
Identity = 49/93 (52.69%), Postives = 65/93 (69.89%), Query Frame = 0


Query: 3   IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL 62
           I+VVDS DRER+ +A+ E   ++ +  + ++V+LVFANKQD+  AM   E+   LGL  L
Sbjct: 89  IFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL 148

Query: 63  KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMR 96
           +HR W+IQ TCA  GDGLYEGLDWLA  LK  +
Sbjct: 149 RHRNWYIQATCATSGDGLYEGLDWLANQLKNKK 181

[Close]

BLAST of HG10009404 vs. ExPASy Swiss-Prot
Match: Q5R5P7 (ADP-ribosylation factor 3 OS=Pongo abelii OX=9601 GN=ARF3 PE=2 SV=3)

HSP 1 Score: 110.5 bits (275), Expect = 1.1e-23
Identity = 49/93 (52.69%), Postives = 65/93 (69.89%), Query Frame = 0


Query: 3   IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL 62
           I+VVDS DRER+ +A+ E   ++ +  + ++V+LVFANKQD+  AM   E+   LGL  L
Sbjct: 89  IFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL 148

Query: 63  KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMR 96
           +HR W+IQ TCA  GDGLYEGLDWLA  LK  +
Sbjct: 149 RHRNWYIQATCATSGDGLYEGLDWLANQLKNKK 181

[Close]

BLAST of HG10009404 vs. ExPASy TrEMBL
Match: A0A6J1EN07 (ADP-ribosylation factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111435834 PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.1e-53
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 3   IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL 62
           IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL
Sbjct: 89  IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL 148

Query: 63  KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF 107
           KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF
Sbjct: 149 KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF 192

[Close]

BLAST of HG10009404 vs. ExPASy TrEMBL
Match: A0A1S3CTE5 (ADP-ribosylation factor-like OS=Cucumis melo OX=3656 GN=LOC103504673 PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.1e-53
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 3   IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL 62
           IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL
Sbjct: 89  IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL 148

Query: 63  KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF 107
           KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF
Sbjct: 149 KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF 192

[Close]

BLAST of HG10009404 vs. ExPASy TrEMBL
Match: A0A6J1I4N1 (ADP-ribosylation factor-like OS=Cucurbita maxima OX=3661 GN=LOC111469127 PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 4.2e-53
Identity = 103/104 (99.04%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 3   IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL 62
           IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAM PMEVCQGLGLFDL
Sbjct: 89  IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMAPMEVCQGLGLFDL 148

Query: 63  KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF 107
           KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF
Sbjct: 149 KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF 192

[Close]

BLAST of HG10009404 vs. ExPASy TrEMBL
Match: A0A6J1CCJ1 (ADP-ribosylation factor-like OS=Momordica charantia OX=3673 GN=LOC111009473 PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 5.5e-53
Identity = 103/104 (99.04%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 3   IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL 62
           IYVVDSLDRERIGKAK EFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL
Sbjct: 89  IYVVDSLDRERIGKAKIEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL 148

Query: 63  KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF 107
           KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF
Sbjct: 149 KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF 192

[Close]

BLAST of HG10009404 vs. ExPASy TrEMBL
Match: A0A0A0KRL7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G169070 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.2e-52
Identity = 103/104 (99.04%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 3   IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL 62
           IYVVDSLDRERI KAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL
Sbjct: 89  IYVVDSLDRERIVKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL 148

Query: 63  KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF 107
           KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF
Sbjct: 149 KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF 192

[Close]

BLAST of HG10009404 vs. TAIR 10
Match: AT3G03120.1 (ADP-ribosylation factor B1C )

HSP 1 Score: 190.7 bits (483), Expect = 6.2e-49
Identity = 89/104 (85.58%), Postives = 97/104 (93.27%), Query Frame = 0


Query: 3   IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL 62
           IYVVDSLDRERIGKAK EFQ II DPFMLNSVILVFANKQDM+GAM+P EVC+GLGL DL
Sbjct: 89  IYVVDSLDRERIGKAKQEFQDIIRDPFMLNSVILVFANKQDMRGAMSPREVCEGLGLLDL 148

Query: 63  KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF 107
           K+RKWHIQGTCAL+GDGLYEGLDWL+ TLKE++AAGYSSVG SF
Sbjct: 149 KNRKWHIQGTCALQGDGLYEGLDWLSATLKEVKAAGYSSVGPSF 192

[Close]

BLAST of HG10009404 vs. TAIR 10
Match: AT5G17060.1 (ADP-ribosylation factor B1B )

HSP 1 Score: 190.3 bits (482), Expect = 8.1e-49
Identity = 87/104 (83.65%), Postives = 98/104 (94.23%), Query Frame = 0


Query: 3   IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL 62
           IYVVDSLDRERIGKAK EFQ II DPFMLNS+ILVFANKQDM+GAM+P EVC+GLGLFDL
Sbjct: 89  IYVVDSLDRERIGKAKQEFQEIIKDPFMLNSIILVFANKQDMRGAMSPREVCEGLGLFDL 148

Query: 63  KHRKWHIQGTCALRGDGLYEGLDWLAGTLKEMRAAGYSSVGTSF 107
           K+RKWHIQGTCALRGDGLYEGLDWL+ TLK+++AAG++SVG SF
Sbjct: 149 KNRKWHIQGTCALRGDGLYEGLDWLSSTLKDVKAAGFTSVGHSF 192

[Close]

BLAST of HG10009404 vs. TAIR 10
Match: AT2G24765.1 (ADP-ribosylation factor 3 )

HSP 1 Score: 105.5 bits (262), Expect = 2.6e-23
Identity = 48/90 (53.33%), Postives = 65/90 (72.22%), Query Frame = 0


Query: 3   IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL 62
           IYVVDS D +RIG AK EF AI+ +  +  +V+L+FANKQD+ GA+    V + L L  +
Sbjct: 89  IYVVDSSDTDRIGVAKEEFHAILEEDELKGAVVLIFANKQDLPGALDDAAVTEALELHKI 148

Query: 63  KHRKWHIQGTCALRGDGLYEGLDWLAGTLK 93
           K R+W I  TCA++G+GL+EGLDWL+ TLK
Sbjct: 149 KSRQWAIFKTCAVKGEGLFEGLDWLSNTLK 178

[Close]

BLAST of HG10009404 vs. TAIR 10
Match: AT1G70490.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 101.7 bits (252), Expect = 3.8e-22
Identity = 44/89 (49.44%), Postives = 63/89 (70.79%), Query Frame = 0


Query: 3   IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL 62
           I+VVDS DR+R+ +A+ E   ++N+  + ++V+LVFANKQD+  AM   E+   LGL  L
Sbjct: 89  IFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL 148

Query: 63  KHRKWHIQGTCALRGDGLYEGLDWLAGTL 92
           + R W+IQ TCA  G+GLYEGLDWL+  +
Sbjct: 149 RQRHWYIQSTCATSGEGLYEGLDWLSNNI 177

[Close]

BLAST of HG10009404 vs. TAIR 10
Match: AT1G23490.1 (ADP-ribosylation factor 1 )

HSP 1 Score: 101.7 bits (252), Expect = 3.8e-22
Identity = 44/89 (49.44%), Postives = 63/89 (70.79%), Query Frame = 0


Query: 3   IYVVDSLDRERIGKAKTEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCQGLGLFDL 62
           I+VVDS DR+R+ +A+ E   ++N+  + ++V+LVFANKQD+  AM   E+   LGL  L
Sbjct: 89  IFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL 148

Query: 63  KHRKWHIQGTCALRGDGLYEGLDWLAGTL 92
           + R W+IQ TCA  G+GLYEGLDWL+  +
Sbjct: 149 RQRHWYIQSTCATSGEGLYEGLDWLSNNI 177

The following BLAST results are available for this feature:

BLAST of HG10009404 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875942.1	2.3e-53	100.00	ADP-ribosylation factor-like [Benincasa hispida] >XP_038875943.1 ADP-ribosylatio...	[more]
KAG7017106.1	2.3e-53	100.00	ADP-ribosylation factor, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022929174.1	2.3e-53	100.00	ADP-ribosylation factor 1-like [Cucurbita moschata] >XP_022929175.1 ADP-ribosyla...	[more]
XP_008467293.1	2.3e-53	100.00	PREDICTED: ADP-ribosylation factor-like [Cucumis melo]	[more]
XP_022970138.1	8.7e-53	99.04	ADP-ribosylation factor-like [Cucurbita maxima] >XP_022970139.1 ADP-ribosylation...	[more]

BLAST of HG10009404 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P91924	1.4e-24	55.56	ADP-ribosylation factor OS=Dugesia japonica OX=6161 PE=2 SV=3	[more]
Q5E9I6	1.1e-23	52.69	ADP-ribosylation factor 3 OS=Bos taurus OX=9913 GN=ARF3 PE=2 SV=3	[more]
P61204	1.1e-23	52.69	ADP-ribosylation factor 3 OS=Homo sapiens OX=9606 GN=ARF3 PE=1 SV=2	[more]
P61205	1.1e-23	52.69	ADP-ribosylation factor 3 OS=Mus musculus OX=10090 GN=Arf3 PE=2 SV=2	[more]
Q5R5P7	1.1e-23	52.69	ADP-ribosylation factor 3 OS=Pongo abelii OX=9601 GN=ARF3 PE=2 SV=3	[more]

BLAST of HG10009404 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EN07	1.1e-53	100.00	ADP-ribosylation factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111435834 PE=...	[more]
A0A1S3CTE5	1.1e-53	100.00	ADP-ribosylation factor-like OS=Cucumis melo OX=3656 GN=LOC103504673 PE=3 SV=1	[more]
A0A6J1I4N1	4.2e-53	99.04	ADP-ribosylation factor-like OS=Cucurbita maxima OX=3661 GN=LOC111469127 PE=3 SV...	[more]
A0A6J1CCJ1	5.5e-53	99.04	ADP-ribosylation factor-like OS=Momordica charantia OX=3673 GN=LOC111009473 PE=3...	[more]
A0A0A0KRL7	1.2e-52	99.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G169070 PE=3 SV=1	[more]

BLAST of HG10009404 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G03120.1	6.2e-49	85.58	ADP-ribosylation factor B1C	[more]
AT5G17060.1	8.1e-49	83.65	ADP-ribosylation factor B1B	[more]
AT2G24765.1	2.6e-23	53.33	ADP-ribosylation factor 3	[more]
AT1G70490.1	3.8e-22	49.44	Ras-related small GTP-binding family protein	[more]
AT1G23490.1	3.8e-22	49.44	ADP-ribosylation factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..95 e-value: 1.5E-4 score: 17.2
None	No IPR available	PANTHER	PTHR11711	ADP RIBOSYLATION FACTOR-RELATED	coord: 3..105
None	No IPR available	PANTHER	PTHR11711:SF382	ADP-RIBOSYLATION FACTOR B1B	coord: 3..105
None	No IPR available	PROSITE	PS51417	ARF	coord: 1..91 score: 8.535484
IPR006689	Small GTPase superfamily, ARF/SAR type	PFAM	PF00025	Arf	coord: 3..89 e-value: 2.5E-25 score: 89.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..96 e-value: 2.5E-32 score: 113.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 3..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10009404.1	HG10009404.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding