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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGATGGCAAGGAGATTGGTGGAAGTTCAAGTTTCAGCAACCTTGCTGACAATTACAGAGGCATATTTGGCGATTGTCGACTCTGGGGATTGCCGAAGCTGCCCGACCACTGGAAATAGCTTTGATGAAAGAAGGAACTGTCGGCAGGGTGCGTGTGCGCACATCTTTGCCAAGGAAAACAGGGCTATCTTGAGAGGAGACTCATTTGCTGCATCTTTTCTGCTTGGATTCAAGGCTACTGCCGAACAGTCCGCCACCAACTTTAACAAAGCCTGTATTGATATTTAA mRNA sequence ATGATGGCAAGGAGATTGGTGGAAGTTCAAGTTTCAGCAACCTTGCTGACAATTACAGAGGCATATTTGGCGATTGTCGACTCTGGGGATTGCCGAAGCTGCCCGACCACTGGAAATAGCTTTGATGAAAGAAGGAACTGTCGGCAGGGTGCGTGTGCGCACATCTTTGCCAAGGAAAACAGGGCTATCTTGAGAGGAGACTCATTTGCTGCATCTTTTCTGCTTGGATTCAAGGCTACTGCCGAACAGTCCGCCACCAACTTTAACAAAGCCTGTATTGATATTTAA Coding sequence (CDS) ATGATGGCAAGGAGATTGGTGGAAGTTCAAGTTTCAGCAACCTTGCTGACAATTACAGAGGCATATTTGGCGATTGTCGACTCTGGGGATTGCCGAAGCTGCCCGACCACTGGAAATAGCTTTGATGAAAGAAGGAACTGTCGGCAGGGTGCGTGTGCGCACATCTTTGCCAAGGAAAACAGGGCTATCTTGAGAGGAGACTCATTTGCTGCATCTTTTCTGCTTGGATTCAAGGCTACTGCCGAACAGTCCGCCACCAACTTTAACAAAGCCTGTATTGATATTTAA Protein sequence MMARRLVEVQVSATLLTITEAYLAIVDSGDCRSCPTTGNSFDERRNCRQGACAHIFAKENRAILRGDSFAASFLLGFKATAEQSATNFNKACIDI
Homology
BLAST of HG10009402 vs. NCBI nr
Match: KAF7825090.1 (delta(24)-sterol reductase-like [Senna tora]) HSP 1 Score: 115.2 bits (287), Expect = 3.2e-22 Identity = 59/87 (67.82%), Postives = 65/87 (74.71%), Query Frame = 0
Query: 6 LVEVQVSATLLTITEAYLAIVDSGDCRSCPTTGNSFDERRNCRQGACAHIFAKENRAILR 65
L E Q SATLL +TEAYLAI DSGDC + PTTGN DERRNC QG CAHI AKE RAI +
Sbjct: 70 LFEHQASATLLIMTEAYLAICDSGDCCNLPTTGNKGDERRNCLQGECAHILAKEKRAIFK 129
Query: 66 GDSFAASFLLGFKATAEQSATNFNKAC 93
G+S A SFLLGF A EQS +F +AC
Sbjct: 130 GESLAESFLLGFNAITEQSDISFRRAC 156
BLAST of HG10009402 vs. NCBI nr
Match: XP_022559966.1 (delta(24)-sterol reductase-like [Brassica napus]) HSP 1 Score: 63.9 bits (154), Expect = 8.4e-07 Identity = 35/58 (60.34%), Postives = 38/58 (65.52%), Query Frame = 0
Query: 37 TGNSFDERRNCRQ-GACAHIFAKENRAILRGDSFAASFLLGFKATAEQSATNFNKACI 94
TGN+ D+ NC HI A E AIL GDS A SFLLGFKATAEQS TNF+ CI
Sbjct: 545 TGNNSDDFTNCLHIWWFEHILANEKSAILSGDSLAVSFLLGFKATAEQSETNFSNVCI 602
BLAST of HG10009402 vs. ExPASy TrEMBL
Match: A0A2N9H408 (Protein kinase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS34146 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 7.7e-06 Identity = 29/41 (70.73%), Postives = 32/41 (78.05%), Query Frame = 0
Query: 10 QVSATLLTITEAYLAIVDSGDCRSCPTTGNSFDERRNCRQG 51
Q S TLL +TEAY IVDSGDCRS P TGN+ DE+RNC QG
Sbjct: 783 QASETLLIMTEAYWEIVDSGDCRSRPITGNNSDEQRNCLQG 823
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| KAF7825090.1 | 3.2e-22 | 67.82 | delta(24)-sterol reductase-like [Senna tora] | [more] |
| XP_022559966.1 | 8.4e-07 | 60.34 | delta(24)-sterol reductase-like [Brassica napus] | [more] |
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
|---|
| A0A2N9H408 | 7.7e-06 | 70.73 | Protein kinase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCU... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
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