HG10009398 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10009398
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	rubredoxin family protein
Location	Chr06: 5477998 .. 5482353 (-)
RNA-Seq Expression	HG10009398
Synteny	HG10009398

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATCGGCCATTGTTGCAGGTTCATCCTCCTCCTGCTCCGCCGCCTTCACCAGATCCTCCATCAGATCTTCCCCTCTCTTCCCATCTCCAAAACCCTCTGTTTCGCAAAACCCTCAGGTATTTCTCATCATTCAAGAAAACCCAAATCCCCGATTCATTGCTCTGGCTTTCTACTGACTGTTTTTATGGTTGTTGTTGGTTCTTCAGAAAAGTGCTTTTCAAGGGTTGTCGGTGCAGGAGGCTAAGAAGGGGGTGTCGCATTGGTTCGCGGCGGAGAATGGAGAGGGCGACGGCGGTAAGTGGTCGAGGGGGCTTCAAATTAGGGCGGCTAAGACTGCCGGAGCTTCCAAAACGATTGAGGTTGAAGTAGATAAGCCATTGGGTCTTACTTTGGGCCAGAAATCTGGTGGTGGTGTTGTCATCACTGTAAGTTTTCTTTTGGTTTCGTTCTTGCTGTTACCTGGTTTTGCTGCTTTTTTGGGTTTTGGATAATCTGAGAATAGATGATTGTTTATTATAAATATCATTAATTAATTGATATTTTTAAATATAAAAAAAATGAGCCAAATTATTTATAAATATAAAAGAAATTTATTCTCATAGAATTACGCTACAACTATAGACAGCAGCAGCTTGATATTTTTTTTTTTGGTTTATAGTAATTTTTCTTAATTTTGTTAATGGTATATTTTGAACCAAAGTTTATGGAAATATCGATAATTTATGGAAAAATTATAAAAATAATTAAAAAATATTTAAATAAATAAATAAATATTTTAGACTTTTTAAATGAGTTAAAATATTTATTATCAGTACAAGATATTTTATACTTTTTTAATCAAGTTAAGTATATTTATATTATATTTATATTATATTTATATTCGTGACATTTTTTTACTGTTTCTTAGTTATTAAGAAGGTATTTTTTAGGGGTAGTTGCAAATATAGCAATCATGCGCAAAGTATTTATATTAATGTAGCACAATGCAAAAGCATTTGCAGATATAGCAAAATTTAGATTTTGTTTTCAAAGTCTATCAGTGATAGACCATCTCGCTAGTAGGGGTCTATCAGTGATAAACCATATCATTGGTGGGAGTCTATCAATGATTGAGTATATCACTTATAGTTTTTGTAATATTTGCAATTATTTAAAAGAAAAATTTTTAAAAATAGAAAAATAAAGGGAACTATTTACACAAAAATAGCAAATTTTTTAGATAGTTGTGATAGATGTTGATAGAATTCTATCAAGGTCTATCAGTGATAGAAATGATAGACTTCTATCAGCATCTATCACAACTATTTAAAAATTTTGCTATTTTGTAGAAATAGTTTTTCTTATTTTTTTATTTTTAAAAATTTCTTAAACAAAAAAATATTACGAGACACGTTAAAAAATAATTATCAAACATGTTTTTGTTTTATAATAAAAAATAGTTATCATACATAACTAGTGGAAGGGGTTGTAGATGTGTTCTTCAATTGAAAGCACACGAGTATATATAGAACTTCTTAAATTATTTTTACAATATCATAAAAAAAAAAACTTCTATTTTAACATTTTAGTTGTCATCTCAAACTCATTTAGCTGACCAGAATAAAAATCAAAATAAATTATCTTGTCCCATTGAGGTCGTTGTAGTATAGTGGTGAGTATTCCCGCCTGTCACGTGGGTGACCCGGGTTCGATCCCCGGCAACGGCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACCTTTTCCAAATAGTCCTTATAGTTTATGGAATTGTAAAAGTAGTTTTTAGTATGGTTTGGTATTGTGTGGATGTTTTTTTTTGTTAATTAGAGGTAACTTATGGGAATTTTATGTTGGGGTTAGGCAGTGGATGGGGGAGGAAATGCAGCAAAATCAGGGTTAAAAGCAGGGGACCAAGTTCTATACACAAGCAGTTTCTTTGGTGATGAATTATGGCCTGCAGATAAGCTGGGATTTACCAAGACTGCCATTCAAGCCAAGCCTGATTCTGTCTACTTTGTAGTTAGCAGGTTCTTTTTCCCCTTTCATCTTCTTCTTATTTTTAAATTAACTTTTATTTTATTTTCTTAATTACTTTTTGTATTTTTTTTTCTTTTCTTTCCTTTTTCTCCTTCCTAATTCTTCTCAATTTTTTGTTTAATTGTTTGATTTTGTATAAAATAACTATTTTATTTCTTACCCTTTTTTTGAAAATTAATGTTATAAACTCTATTTTATTTGGATTTTGATTTTTGAAAATTAAATTGATAAACACTATTTTCATCTATGAGTTTTGTTCTTTTTGTTTTTCCATAAAAAATTATTTTCAAAATTCAAGACAAATTCTGTGAACTAAGGTATTGTTTGCTAATTATTTCAGGGTTGGTTTTTGGATTTTTTTAAAAAAATTTATAAACACTACTTCTACTTATGAGTTTCGCTGTGTTATTTACCTTTTAATGTTTTTCAGAATTCAAGTAAAAGATTTGGAAACTAAAGAATTTTATGTTTTTTAGAATTTGGCTGAATTTAAAAGGGTGTCTACAAATATTTGGTTATCCATTTATTATTTATTTTAATTCAATTTGGCTCAGTAAACATGAAAAACCTAGTAAATAAACTCTGAGGAAACAAAAATAAATTTCAAAAATAGAAAAACAAAAAATTAAGTTCCCATTTGATAACATTTTTGTTTTTGAAAATTAAGCCTATAAACACTACTTCAATTTATTGGTTTCTATGTTTTGTTGTTTACATTTTACAAGTGTTTAAAATCCAAGCCAAAATTTGAAAACTAAAAAAAACATTGTTTATTTATTATTTTTTTTAAAATTTGGCTAAAAAATCAAATTTTTTACATAGGAAAAACGAAAAACCATGATTAAGAAGTTATAGAAAGACAAGCACAAGCACCATTTTTAAAAACCGAAAACAAAAAGCCGAATAATTATCAAACGAGACCTAAATCGTTATTAAAGAACTAGGATGTGACTTAAACTCAAAACATTTCTTTTGCAATAAATAATAGTAACCTTCATTAAAAGCTTACAATTTTTTTTTTTTTTATTTTAAAAAAAACTTAACAAATAATAGGTGTACTTTTCCTTAACAACAATGTATGATGTTATATTAACTTGTAAAATGTTCTTAATATAGAGGTGCAGAGGTTGATGTTAAACGACTCCCAAAGAGGCCTGCGCCACCTCGCTTTGGAAGAAAACTTACTGATGCACAAAAGGTAAAAATCACTCAGCCATCATAATTTTACCTTTGTATTAGATTTTTTACTCCACACCTTTAGGCTTTTAGCTTCATGGTTTTGCATTACTATGTTGTGCAGGCTAAAGCAACTCATATATGCCTGGATTGTGGATACATTTACACCTTATCGAAACCCTTTGATGAGCAGGTTTGTCTTAATCTCGACTTTTTTAAACCATTATTATCAAAGCATAGCTTAGTGGATAAGACACTAGTTACTATTCCAAAAGTTGAGGGTTCGATCTCCACTCTGTAATTGTTGAACTTAAAAAAGAATAAATCGTTAATATAAGATGTCACACGTTAATTTACCAAAAAATAGGACACATTATTTATTTATTTTTTTTTTTACAAAAATAAATATATGTGTGCATAATTAGACATATTGTGAAATATGCGCACATATACTTAACAAAAAGTAAGAAAAAACAGAAACGGAAAAAAAAGGAAAGATAAAACCGAAGGAAAAAAATAGAAATGAGAAAAAAAAAAATAGTAAGAGAAGTCACATAAGTTGTCCGCGGTTGTGGGTCTTGAAGTTGAAGTCATTGCTGTCGATGAAGTTAGAAAGAAGAATCATGTAACATAGTGAGTTATGTATATAATATAATATAATGTATGAAGTACGAACGAACAAAATGGACTAGGTTAATTTAGTCAAACAGTGATTTTACATTGGAATTAAGCCAAGCCTACGGAAATGCTTAGGTTAGGCGTTGACTCAAGCTAGACATCAAGTCACATGTTATTTGACGAGACTATGTTAGATGAGTTTGTTTTTCTAAGCATGGTTTGGATTGTATAATTCTTTCAACACGAGTCAACTAACCGTGTTTAAACATGTATATCATCGTTGATCGCGTTTATGTTCGAACTAAATGAGTTGTGGTTTGGATGGTGCAGCCTGATGGATATGCATGCCCTCAATGTAGAGCACCAAAGAAAAGGTTTGCAAAATATGATGTGAACACAGGAAAGGCAATAGGAGGGGGTTTGCCTCCAATTGGAGTCATTGCTGGTTTGGTTGCTGGCATTGGTGCTGTTGGAGCATTGCTTGTTTATGGCCTTCAGTGA

mRNA sequence

ATGTCATCGGCCATTGTTGCAGGTTCATCCTCCTCCTGCTCCGCCGCCTTCACCAGATCCTCCATCAGATCTTCCCCTCTCTTCCCATCTCCAAAACCCTCTGTTTCGCAAAACCCTCAGAAAAGTGCTTTTCAAGGGTTGTCGGTGCAGGAGGCTAAGAAGGGGGTGTCGCATTGGTTCGCGGCGGAGAATGGAGAGGGCGACGGCGGTAAGTGGTCGAGGGGGCTTCAAATTAGGGCGGCTAAGACTGCCGGAGCTTCCAAAACGATTGAGGTTGAAGTAGATAAGCCATTGGGTCTTACTTTGGGCCAGAAATCTGGTGGTGGTGTTGTCATCACTGCAGTGGATGGGGGAGGAAATGCAGCAAAATCAGGGTTAAAAGCAGGGGACCAAGTTCTATACACAAGCAGTTTCTTTGGTGATGAATTATGGCCTGCAGATAAGCTGGGATTTACCAAGACTGCCATTCAAGCCAAGCCTGATTCTGTCTACTTTGTAGTTAGCAGAGGTGCAGAGGTTGATGTTAAACGACTCCCAAAGAGGCCTGCGCCACCTCGCTTTGGAAGAAAACTTACTGATGCACAAAAGGCTAAAGCAACTCATATATGCCTGGATTGTGGATACATTTACACCTTATCGAAACCCTTTGATGAGCAGCCTGATGGATATGCATGCCCTCAATGTAGAGCACCAAAGAAAAGGTTTGCAAAATATGATGTGAACACAGGAAAGGCAATAGGAGGGGGTTTGCCTCCAATTGGAGTCATTGCTGGTTTGGTTGCTGGCATTGGTGCTGTTGGAGCATTGCTTGTTTATGGCCTTCAGTGA

Coding sequence (CDS)

ATGTCATCGGCCATTGTTGCAGGTTCATCCTCCTCCTGCTCCGCCGCCTTCACCAGATCCTCCATCAGATCTTCCCCTCTCTTCCCATCTCCAAAACCCTCTGTTTCGCAAAACCCTCAGAAAAGTGCTTTTCAAGGGTTGTCGGTGCAGGAGGCTAAGAAGGGGGTGTCGCATTGGTTCGCGGCGGAGAATGGAGAGGGCGACGGCGGTAAGTGGTCGAGGGGGCTTCAAATTAGGGCGGCTAAGACTGCCGGAGCTTCCAAAACGATTGAGGTTGAAGTAGATAAGCCATTGGGTCTTACTTTGGGCCAGAAATCTGGTGGTGGTGTTGTCATCACTGCAGTGGATGGGGGAGGAAATGCAGCAAAATCAGGGTTAAAAGCAGGGGACCAAGTTCTATACACAAGCAGTTTCTTTGGTGATGAATTATGGCCTGCAGATAAGCTGGGATTTACCAAGACTGCCATTCAAGCCAAGCCTGATTCTGTCTACTTTGTAGTTAGCAGAGGTGCAGAGGTTGATGTTAAACGACTCCCAAAGAGGCCTGCGCCACCTCGCTTTGGAAGAAAACTTACTGATGCACAAAAGGCTAAAGCAACTCATATATGCCTGGATTGTGGATACATTTACACCTTATCGAAACCCTTTGATGAGCAGCCTGATGGATATGCATGCCCTCAATGTAGAGCACCAAAGAAAAGGTTTGCAAAATATGATGTGAACACAGGAAAGGCAATAGGAGGGGGTTTGCCTCCAATTGGAGTCATTGCTGGTTTGGTTGCTGGCATTGGTGCTGTTGGAGCATTGCTTGTTTATGGCCTTCAGTGA

Protein sequence

MSSAIVAGSSSSCSAAFTRSSIRSSPLFPSPKPSVSQNPQKSAFQGLSVQEAKKGVSHWFAAENGEGDGGKWSRGLQIRAAKTAGASKTIEVEVDKPLGLTLGQKSGGGVVITAVDGGGNAAKSGLKAGDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVSRGAEVDVKRLPKRPAPPRFGRKLTDAQKAKATHICLDCGYIYTLSKPFDEQPDGYACPQCRAPKKRFAKYDVNTGKAIGGGLPPIGVIAGLVAGIGAVGALLVYGLQ

Homology

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BLAST of HG10009398 vs. NCBI nr
Match: XP_038906692.1 (uncharacterized protein LOC120092622 [Benincasa hispida])

HSP 1 Score: 529.6 bits (1363), Expect = 1.6e-146
Identity = 271/275 (98.55%), Postives = 272/275 (98.91%), Query Frame = 0


Query: 1   MSSAIVAGSSSSCSAAFTRSSIRSSPLFPSPKPSVSQNPQKSAFQGLSVQEAKKGVSHWF 60
           MSSAIVAGSSSSCSAAFTRSSIRSSPLFPSPKPSVS N QKSAFQG+SVQEAKKG SHWF
Sbjct: 1   MSSAIVAGSSSSCSAAFTRSSIRSSPLFPSPKPSVSPNAQKSAFQGVSVQEAKKGASHWF 60

Query: 61  AAENGEGDGGKWSRGLQIRAAKTAGASKTIEVEVDKPLGLTLGQKSGGGVVITAVDGGGN 120
           AAENGEGDGGKWSRGLQIRAAKTAGASKTIEVEVDKPLGLTLGQKSGGGVVITAVDGGGN
Sbjct: 61  AAENGEGDGGKWSRGLQIRAAKTAGASKTIEVEVDKPLGLTLGQKSGGGVVITAVDGGGN 120

Query: 121 AAKSGLKAGDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVSRGAEVDVKRLPK 180
           AAKSGLKAGDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVSRGAEVDVKRLPK
Sbjct: 121 AAKSGLKAGDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVSRGAEVDVKRLPK 180

Query: 181 RPAPPRFGRKLTDAQKAKATHICLDCGYIYTLSKPFDEQPDGYACPQCRAPKKRFAKYDV 240
           RPAPPRFGRKLTDAQKAKATHICLDCGYIYTLSKPFDEQPDGYACPQCRAPKKRFAKYDV
Sbjct: 181 RPAPPRFGRKLTDAQKAKATHICLDCGYIYTLSKPFDEQPDGYACPQCRAPKKRFAKYDV 240

Query: 241 NTGKAIGGGLPPIGVIAGLVAGIGAVGALLVYGLQ 276
           NTGKAIGGGLPPIGVIAGLVAGIGAVGALLVYGLQ
Sbjct: 241 NTGKAIGGGLPPIGVIAGLVAGIGAVGALLVYGLQ 275

[Close]

BLAST of HG10009398 vs. NCBI nr
Match: XP_004143657.1 (uncharacterized protein LOC101215685 [Cucumis sativus] >KGN50362.1 hypothetical protein Csa_000055 [Cucumis sativus])

HSP 1 Score: 489.6 bits (1259), Expect = 1.8e-134
Identity = 255/276 (92.39%), Postives = 262/276 (94.93%), Query Frame = 0


Query: 1   MSSAIV-AGSSSSCSAAFTRSSIRSSPLFPSPKPSVSQNPQKSAFQGLSVQEAKKGVSHW 60
           MSSAIV A SSSSCSAA+TRSSIRSSP FPSPKPSVS   QKS F GLSV EAKKGVSHW
Sbjct: 1   MSSAIVAASSSSSCSAAYTRSSIRSSPHFPSPKPSVSLTTQKSVFLGLSVAEAKKGVSHW 60

Query: 61  FAAENGEGDGGKWSRGLQIRAAKTAGASKTIEVEVDKPLGLTLGQKSGGGVVITAVDGGG 120
           F AEN E +GGK S+GLQIRAAKTAGASKTIEVEVDKPLGLTLGQKSGGGVVITAVDGGG
Sbjct: 61  FTAENTEAEGGKRSKGLQIRAAKTAGASKTIEVEVDKPLGLTLGQKSGGGVVITAVDGGG 120

Query: 121 NAAKSGLKAGDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVSRGAEVDVKRLP 180
           NAAK+GLK+GDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVSRGAEVDVKRLP
Sbjct: 121 NAAKAGLKSGDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVSRGAEVDVKRLP 180

Query: 181 KRPAPPRFGRKLTDAQKAKATHICLDCGYIYTLSKPFDEQPDGYACPQCRAPKKRFAKYD 240
           KRPAPPRFGRKLTDAQKAKATHICLDCGYIYTLSKPFDEQPDGYACPQC APKKRFAKYD
Sbjct: 181 KRPAPPRFGRKLTDAQKAKATHICLDCGYIYTLSKPFDEQPDGYACPQCIAPKKRFAKYD 240

Query: 241 VNTGKAIGGGLPPIGVIAGLVAGIGAVGALLVYGLQ 276
           V+TGKA+GGGLPPIGVIAGLVAGIGAVGALLVYGLQ
Sbjct: 241 VSTGKAVGGGLPPIGVIAGLVAGIGAVGALLVYGLQ 276

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BLAST of HG10009398 vs. NCBI nr
Match: XP_008467304.1 (PREDICTED: uncharacterized protein LOC103504684 [Cucumis melo] >KAA0055114.1 uncharacterized protein E6C27_scaffold231G00400 [Cucumis melo var. makuwa])

HSP 1 Score: 488.8 bits (1257), Expect = 3.1e-134
Identity = 258/276 (93.48%), Postives = 262/276 (94.93%), Query Frame = 0


Query: 1   MSSAIV-AGSSSSCSAAFTRSSIRSSPLFPSPKPSVSQNPQKSAFQGLSVQEAKKGVSHW 60
           MSSAIV A SSSSCSAAFTRSSIRSSP FPSPK SVS NPQKS F GLSV EAKKGVS  
Sbjct: 1   MSSAIVAASSSSSCSAAFTRSSIRSSPHFPSPKSSVSPNPQKSVFLGLSVPEAKKGVS-- 60

Query: 61  FAAENGEGDGGKWSRGLQIRAAKTAGASKTIEVEVDKPLGLTLGQKSGGGVVITAVDGGG 120
            A EN E DGGKWS+GLQIRAAKTAGASKTIEVEVDKPLGLTLGQKSGGGVVITAVDGGG
Sbjct: 61  -AVENTEADGGKWSKGLQIRAAKTAGASKTIEVEVDKPLGLTLGQKSGGGVVITAVDGGG 120

Query: 121 NAAKSGLKAGDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVSRGAEVDVKRLP 180
           NAAK+GLKAGDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVV+RGAEVDVKRLP
Sbjct: 121 NAAKAGLKAGDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVNRGAEVDVKRLP 180

Query: 181 KRPAPPRFGRKLTDAQKAKATHICLDCGYIYTLSKPFDEQPDGYACPQCRAPKKRFAKYD 240
           KRPAPPRFGRKLTDAQKAKATHICLDCGYIYTLSKPFDEQPDGYACPQCRAPKKRFAKYD
Sbjct: 181 KRPAPPRFGRKLTDAQKAKATHICLDCGYIYTLSKPFDEQPDGYACPQCRAPKKRFAKYD 240

Query: 241 VNTGKAIGGGLPPIGVIAGLVAGIGAVGALLVYGLQ 276
           V+TGKAIGGGLPPIGVIAGLVAGIGAVGALLVYGLQ
Sbjct: 241 VSTGKAIGGGLPPIGVIAGLVAGIGAVGALLVYGLQ 273

[Close]

BLAST of HG10009398 vs. NCBI nr
Match: XP_023549894.1 (uncharacterized protein LOC111808255 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 478.4 bits (1230), Expect = 4.1e-131
Identity = 247/275 (89.82%), Postives = 258/275 (93.82%), Query Frame = 0


Query: 1   MSSAIVAGSSSSCSAAFTRSSIRSSPLFPSPKPSVSQNPQKSAFQGLSVQEAKKGVSHWF 60
           MSSAIVAGSSSSCSAAFTR++   +PLFPS KPSV   PQKSAFQGLSVQEAKKGVSHWF
Sbjct: 1   MSSAIVAGSSSSCSAAFTRTTTIGAPLFPSSKPSVPPLPQKSAFQGLSVQEAKKGVSHWF 60

Query: 61  AAENGEGDGGKWSRGLQIRAAKTAGASKTIEVEVDKPLGLTLGQKSGGGVVITAVDGGGN 120
            AENGE    +  RGLQIRAAKTAGASKT+EVEVDKPLGLTLGQK GGGVVITAVDGGGN
Sbjct: 61  VAENGEAH-SRSRRGLQIRAAKTAGASKTVEVEVDKPLGLTLGQKPGGGVVITAVDGGGN 120

Query: 121 AAKSGLKAGDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVSRGAEVDVKRLPK 180
           AAKSGLKAGDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVV+RGA+VDVKRLPK
Sbjct: 121 AAKSGLKAGDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVNRGADVDVKRLPK 180

Query: 181 RPAPPRFGRKLTDAQKAKATHICLDCGYIYTLSKPFDEQPDGYACPQCRAPKKRFAKYDV 240
           RPAPPRFGRKLT+AQKAKATHICLDCGYIYTLSKPFDEQP+GYACPQC APKKRFA+YDV
Sbjct: 181 RPAPPRFGRKLTEAQKAKATHICLDCGYIYTLSKPFDEQPEGYACPQCVAPKKRFARYDV 240

Query: 241 NTGKAIGGGLPPIGVIAGLVAGIGAVGALLVYGLQ 276
           NTGKAIGGGLPPIGVIAGLVAG+ AVGALLVYGLQ
Sbjct: 241 NTGKAIGGGLPPIGVIAGLVAGVAAVGALLVYGLQ 274

[Close]

BLAST of HG10009398 vs. NCBI nr
Match: XP_022928804.1 (uncharacterized protein LOC111435615 [Cucurbita moschata])

HSP 1 Score: 478.0 bits (1229), Expect = 5.4e-131
Identity = 246/275 (89.45%), Postives = 258/275 (93.82%), Query Frame = 0


Query: 1   MSSAIVAGSSSSCSAAFTRSSIRSSPLFPSPKPSVSQNPQKSAFQGLSVQEAKKGVSHWF 60
           MSSAIVAGSSSSCSAAFTR++   +PLFPS KPSVS  PQKSAFQGLSVQEAKKGVSHWF
Sbjct: 1   MSSAIVAGSSSSCSAAFTRTTTTGAPLFPSSKPSVSPLPQKSAFQGLSVQEAKKGVSHWF 60

Query: 61  AAENGEGDGGKWSRGLQIRAAKTAGASKTIEVEVDKPLGLTLGQKSGGGVVITAVDGGGN 120
            AENGE    +  RGLQIRAAKTAGASKT+EVEVDKPLGLTLGQK GGGVVITAVDGGGN
Sbjct: 61  VAENGEAH-SRSRRGLQIRAAKTAGASKTVEVEVDKPLGLTLGQKPGGGVVITAVDGGGN 120

Query: 121 AAKSGLKAGDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVSRGAEVDVKRLPK 180
           AAKSGLK GDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVV+RGA+VDVKRLPK
Sbjct: 121 AAKSGLKVGDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVNRGADVDVKRLPK 180

Query: 181 RPAPPRFGRKLTDAQKAKATHICLDCGYIYTLSKPFDEQPDGYACPQCRAPKKRFAKYDV 240
           RPAPPRFGRKLT+AQKAKATHICLDCGYIYTLSKPF+EQP+GYACPQC APKKRFA+YDV
Sbjct: 181 RPAPPRFGRKLTEAQKAKATHICLDCGYIYTLSKPFEEQPEGYACPQCVAPKKRFARYDV 240

Query: 241 NTGKAIGGGLPPIGVIAGLVAGIGAVGALLVYGLQ 276
           NTGKAIGGGLPPIGVIAGLVAG+ AVGALLVYGLQ
Sbjct: 241 NTGKAIGGGLPPIGVIAGLVAGVAAVGALLVYGLQ 274

[Close]

BLAST of HG10009398 vs. ExPASy Swiss-Prot
Match: Q94BS2 (Protein MET1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MET1 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.3e-07
Identity = 35/101 (34.65%), Postives = 55/101 (54.46%), Query Frame = 0


Query: 74  RGLQIRAAKTAGASK--------------TIEVEVDKPLGLTLGQKSGGGVVITAVDGGG 133
           R L ++A++T  ++K              T E+EV++P GL   +   GG  I A+  GG
Sbjct: 59  RNLALKASETESSAKAEAGGDGEEEEKYETYEIEVEQPYGLKFRKGRDGGTYIDAILPGG 118

Query: 134 NAAKSG-LKAGDQVLYTSSFFGDELWPADKLGFTKTAIQAK 160
           +A K+G    GD+V+ TS+ FG E+WPA + G T   I+ +
Sbjct: 119 SADKTGKFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQR 159

[Close]

BLAST of HG10009398 vs. ExPASy TrEMBL
Match: A0A0A0KPK9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G168980 PE=4 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 8.7e-135
Identity = 255/276 (92.39%), Postives = 262/276 (94.93%), Query Frame = 0


Query: 1   MSSAIV-AGSSSSCSAAFTRSSIRSSPLFPSPKPSVSQNPQKSAFQGLSVQEAKKGVSHW 60
           MSSAIV A SSSSCSAA+TRSSIRSSP FPSPKPSVS   QKS F GLSV EAKKGVSHW
Sbjct: 1   MSSAIVAASSSSSCSAAYTRSSIRSSPHFPSPKPSVSLTTQKSVFLGLSVAEAKKGVSHW 60

Query: 61  FAAENGEGDGGKWSRGLQIRAAKTAGASKTIEVEVDKPLGLTLGQKSGGGVVITAVDGGG 120
           F AEN E +GGK S+GLQIRAAKTAGASKTIEVEVDKPLGLTLGQKSGGGVVITAVDGGG
Sbjct: 61  FTAENTEAEGGKRSKGLQIRAAKTAGASKTIEVEVDKPLGLTLGQKSGGGVVITAVDGGG 120

Query: 121 NAAKSGLKAGDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVSRGAEVDVKRLP 180
           NAAK+GLK+GDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVSRGAEVDVKRLP
Sbjct: 121 NAAKAGLKSGDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVSRGAEVDVKRLP 180

Query: 181 KRPAPPRFGRKLTDAQKAKATHICLDCGYIYTLSKPFDEQPDGYACPQCRAPKKRFAKYD 240
           KRPAPPRFGRKLTDAQKAKATHICLDCGYIYTLSKPFDEQPDGYACPQC APKKRFAKYD
Sbjct: 181 KRPAPPRFGRKLTDAQKAKATHICLDCGYIYTLSKPFDEQPDGYACPQCIAPKKRFAKYD 240

Query: 241 VNTGKAIGGGLPPIGVIAGLVAGIGAVGALLVYGLQ 276
           V+TGKA+GGGLPPIGVIAGLVAGIGAVGALLVYGLQ
Sbjct: 241 VSTGKAVGGGLPPIGVIAGLVAGIGAVGALLVYGLQ 276

[Close]

BLAST of HG10009398 vs. ExPASy TrEMBL
Match: A0A5A7UIZ1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00400 PE=4 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 1.5e-134
Identity = 258/276 (93.48%), Postives = 262/276 (94.93%), Query Frame = 0


Query: 1   MSSAIV-AGSSSSCSAAFTRSSIRSSPLFPSPKPSVSQNPQKSAFQGLSVQEAKKGVSHW 60
           MSSAIV A SSSSCSAAFTRSSIRSSP FPSPK SVS NPQKS F GLSV EAKKGVS  
Sbjct: 1   MSSAIVAASSSSSCSAAFTRSSIRSSPHFPSPKSSVSPNPQKSVFLGLSVPEAKKGVS-- 60

Query: 61  FAAENGEGDGGKWSRGLQIRAAKTAGASKTIEVEVDKPLGLTLGQKSGGGVVITAVDGGG 120
            A EN E DGGKWS+GLQIRAAKTAGASKTIEVEVDKPLGLTLGQKSGGGVVITAVDGGG
Sbjct: 61  -AVENTEADGGKWSKGLQIRAAKTAGASKTIEVEVDKPLGLTLGQKSGGGVVITAVDGGG 120

Query: 121 NAAKSGLKAGDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVSRGAEVDVKRLP 180
           NAAK+GLKAGDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVV+RGAEVDVKRLP
Sbjct: 121 NAAKAGLKAGDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVNRGAEVDVKRLP 180

Query: 181 KRPAPPRFGRKLTDAQKAKATHICLDCGYIYTLSKPFDEQPDGYACPQCRAPKKRFAKYD 240
           KRPAPPRFGRKLTDAQKAKATHICLDCGYIYTLSKPFDEQPDGYACPQCRAPKKRFAKYD
Sbjct: 181 KRPAPPRFGRKLTDAQKAKATHICLDCGYIYTLSKPFDEQPDGYACPQCRAPKKRFAKYD 240

Query: 241 VNTGKAIGGGLPPIGVIAGLVAGIGAVGALLVYGLQ 276
           V+TGKAIGGGLPPIGVIAGLVAGIGAVGALLVYGLQ
Sbjct: 241 VSTGKAIGGGLPPIGVIAGLVAGIGAVGALLVYGLQ 273

[Close]

BLAST of HG10009398 vs. ExPASy TrEMBL
Match: A0A1S3CT84 (uncharacterized protein LOC103504684 OS=Cucumis melo OX=3656 GN=LOC103504684 PE=4 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 1.5e-134
Identity = 258/276 (93.48%), Postives = 262/276 (94.93%), Query Frame = 0


Query: 1   MSSAIV-AGSSSSCSAAFTRSSIRSSPLFPSPKPSVSQNPQKSAFQGLSVQEAKKGVSHW 60
           MSSAIV A SSSSCSAAFTRSSIRSSP FPSPK SVS NPQKS F GLSV EAKKGVS  
Sbjct: 1   MSSAIVAASSSSSCSAAFTRSSIRSSPHFPSPKSSVSPNPQKSVFLGLSVPEAKKGVS-- 60

Query: 61  FAAENGEGDGGKWSRGLQIRAAKTAGASKTIEVEVDKPLGLTLGQKSGGGVVITAVDGGG 120
            A EN E DGGKWS+GLQIRAAKTAGASKTIEVEVDKPLGLTLGQKSGGGVVITAVDGGG
Sbjct: 61  -AVENTEADGGKWSKGLQIRAAKTAGASKTIEVEVDKPLGLTLGQKSGGGVVITAVDGGG 120

Query: 121 NAAKSGLKAGDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVSRGAEVDVKRLP 180
           NAAK+GLKAGDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVV+RGAEVDVKRLP
Sbjct: 121 NAAKAGLKAGDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVNRGAEVDVKRLP 180

Query: 181 KRPAPPRFGRKLTDAQKAKATHICLDCGYIYTLSKPFDEQPDGYACPQCRAPKKRFAKYD 240
           KRPAPPRFGRKLTDAQKAKATHICLDCGYIYTLSKPFDEQPDGYACPQCRAPKKRFAKYD
Sbjct: 181 KRPAPPRFGRKLTDAQKAKATHICLDCGYIYTLSKPFDEQPDGYACPQCRAPKKRFAKYD 240

Query: 241 VNTGKAIGGGLPPIGVIAGLVAGIGAVGALLVYGLQ 276
           V+TGKAIGGGLPPIGVIAGLVAGIGAVGALLVYGLQ
Sbjct: 241 VSTGKAIGGGLPPIGVIAGLVAGIGAVGALLVYGLQ 273

[Close]

BLAST of HG10009398 vs. ExPASy TrEMBL
Match: A0A6J1ELX2 (uncharacterized protein LOC111435615 OS=Cucurbita moschata OX=3662 GN=LOC111435615 PE=4 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 2.6e-131
Identity = 246/275 (89.45%), Postives = 258/275 (93.82%), Query Frame = 0


Query: 1   MSSAIVAGSSSSCSAAFTRSSIRSSPLFPSPKPSVSQNPQKSAFQGLSVQEAKKGVSHWF 60
           MSSAIVAGSSSSCSAAFTR++   +PLFPS KPSVS  PQKSAFQGLSVQEAKKGVSHWF
Sbjct: 1   MSSAIVAGSSSSCSAAFTRTTTTGAPLFPSSKPSVSPLPQKSAFQGLSVQEAKKGVSHWF 60

Query: 61  AAENGEGDGGKWSRGLQIRAAKTAGASKTIEVEVDKPLGLTLGQKSGGGVVITAVDGGGN 120
            AENGE    +  RGLQIRAAKTAGASKT+EVEVDKPLGLTLGQK GGGVVITAVDGGGN
Sbjct: 61  VAENGEAH-SRSRRGLQIRAAKTAGASKTVEVEVDKPLGLTLGQKPGGGVVITAVDGGGN 120

Query: 121 AAKSGLKAGDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVSRGAEVDVKRLPK 180
           AAKSGLK GDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVV+RGA+VDVKRLPK
Sbjct: 121 AAKSGLKVGDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVNRGADVDVKRLPK 180

Query: 181 RPAPPRFGRKLTDAQKAKATHICLDCGYIYTLSKPFDEQPDGYACPQCRAPKKRFAKYDV 240
           RPAPPRFGRKLT+AQKAKATHICLDCGYIYTLSKPF+EQP+GYACPQC APKKRFA+YDV
Sbjct: 181 RPAPPRFGRKLTEAQKAKATHICLDCGYIYTLSKPFEEQPEGYACPQCVAPKKRFARYDV 240

Query: 241 NTGKAIGGGLPPIGVIAGLVAGIGAVGALLVYGLQ 276
           NTGKAIGGGLPPIGVIAGLVAG+ AVGALLVYGLQ
Sbjct: 241 NTGKAIGGGLPPIGVIAGLVAGVAAVGALLVYGLQ 274

[Close]

BLAST of HG10009398 vs. ExPASy TrEMBL
Match: A0A6J1HX71 (protein MET1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111468855 PE=4 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 1.7e-130
Identity = 245/275 (89.09%), Postives = 257/275 (93.45%), Query Frame = 0


Query: 1   MSSAIVAGSSSSCSAAFTRSSIRSSPLFPSPKPSVSQNPQKSAFQGLSVQEAKKGVSHWF 60
           MSSAIVAGSSSSCSAAFTR++   +PLFPS KPSV   PQKSAFQGLSVQEAKKGVSHWF
Sbjct: 1   MSSAIVAGSSSSCSAAFTRTTSIGAPLFPSSKPSVPPLPQKSAFQGLSVQEAKKGVSHWF 60

Query: 61  AAENGEGDGGKWSRGLQIRAAKTAGASKTIEVEVDKPLGLTLGQKSGGGVVITAVDGGGN 120
            AENGE    +  RGLQIRAAKTAGASKT+EVEVDKPLGLTLGQK GGGVVITAVDGGGN
Sbjct: 61  VAENGEAH-SRSRRGLQIRAAKTAGASKTVEVEVDKPLGLTLGQKPGGGVVITAVDGGGN 120

Query: 121 AAKSGLKAGDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVSRGAEVDVKRLPK 180
           A+KSGLK GDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVV+RGA+VDVKRLPK
Sbjct: 121 ASKSGLKVGDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVNRGADVDVKRLPK 180

Query: 181 RPAPPRFGRKLTDAQKAKATHICLDCGYIYTLSKPFDEQPDGYACPQCRAPKKRFAKYDV 240
           RPAPPRFGRKLT+AQKAKATHICLDCGYIYTLSKPFDEQP+GYACPQC APKKRFA+YDV
Sbjct: 181 RPAPPRFGRKLTEAQKAKATHICLDCGYIYTLSKPFDEQPEGYACPQCVAPKKRFARYDV 240

Query: 241 NTGKAIGGGLPPIGVIAGLVAGIGAVGALLVYGLQ 276
           NTGKAIGGGLPPIGVIAGLVAG+ AVGALLVYGLQ
Sbjct: 241 NTGKAIGGGLPPIGVIAGLVAGVAAVGALLVYGLQ 274

[Close]

BLAST of HG10009398 vs. TAIR 10
Match: AT5G17170.1 (rubredoxin family protein )

HSP 1 Score: 372.9 bits (956), Expect = 2.3e-103
Identity = 197/267 (73.78%), Postives = 222/267 (83.15%), Query Frame = 0


Query: 9   SSSSCSAAFTRSSIRSSPLFPSPKPSVSQNPQKSAFQGLSVQEAKKGVSHWFAAENGEGD 68
           S ++ S+ FT+++  S+P  P    S S   QK+ FQG+S++++KK VS  FA    +  
Sbjct: 8   SGATVSSFFTKTTTTSNP-SPKLHSSASLLSQKTVFQGVSLEDSKKSVSEIFAVSERKIG 67

Query: 69  GGKWSRGLQIRAAKTAGASKTIEVEVDKPLGLTLGQKSGGGVVITAVDGGGNAAKSGLKA 128
           G    R  +I+A   A ASKTIEVEVDKPLGLTLGQK GGGVVIT VDGGGNAAK+GLK+
Sbjct: 68  GLNGLRRFEIKA--RAAASKTIEVEVDKPLGLTLGQKQGGGVVITGVDGGGNAAKAGLKS 127

Query: 129 GDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVSRGAEVDVKRLPKRPAPPRFG 188
           GDQV+YTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVSRGAEVDVK+L KRPAPPRFG
Sbjct: 128 GDQVVYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVSRGAEVDVKKLNKRPAPPRFG 187

Query: 189 RKLTDAQKAKATHICLDCGYIYTLSKPFDEQPDGYACPQCRAPKKRFAKYDVNTGKAIGG 248
           RKLT+ QKA+ATHICLDCG+IYTL K FDEQPD Y CPQC APKKRFAKYDVNTGKAIGG
Sbjct: 188 RKLTETQKARATHICLDCGFIYTLPKSFDEQPDTYVCPQCIAPKKRFAKYDVNTGKAIGG 247

Query: 249 GLPPIGVIAGLVAGIGAVGALLVYGLQ 276
           GLPPIGVI GL+AG+GAVGALLVYGLQ
Sbjct: 248 GLPPIGVIVGLLAGLGAVGALLVYGLQ 271

[Close]

BLAST of HG10009398 vs. TAIR 10
Match: AT5G17170.2 (rubredoxin family protein )

HSP 1 Score: 233.8 bits (595), Expect = 1.7e-61
Identity = 130/190 (68.42%), Postives = 151/190 (79.47%), Query Frame = 0


Query: 9   SSSSCSAAFTRSSIRSSPLFPSPKPSVSQNPQKSAFQGLSVQEAKKGVSHWFAAENGEGD 68
           S ++ S+ FT+++  S+P  P    S S   QK+ FQG+S++++KK VS  FA    +  
Sbjct: 8   SGATVSSFFTKTTTTSNP-SPKLHSSASLLSQKTVFQGVSLEDSKKSVSEIFAVSERKIG 67

Query: 69  GGKWSRGLQIRAAKTAGASKTIEVEVDKPLGLTLGQKSGGGVVITAVDGGGNAAKSGLKA 128
           G    R  +I+A   A ASKTIEVEVDKPLGLTLGQK GGGVVIT VDGGGNAAK+GLK+
Sbjct: 68  GLNGLRRFEIKA--RAAASKTIEVEVDKPLGLTLGQKQGGGVVITGVDGGGNAAKAGLKS 127

Query: 129 GDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVSRGAEVDVKRLPKRPAPPRFG 188
           GDQV+YTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVSRGAEVDVK+L KRPAPPRFG
Sbjct: 128 GDQVVYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVSRGAEVDVKKLNKRPAPPRFG 187

Query: 189 RKLTDAQKAK 199
           RKLT+ QKAK
Sbjct: 188 RKLTETQKAK 194

[Close]

BLAST of HG10009398 vs. TAIR 10
Match: AT5G51010.1 (Rubredoxin-like superfamily protein )

HSP 1 Score: 63.5 bits (153), Expect = 3.0e-10
Identity = 38/116 (32.76%), Postives = 55/116 (47.41%), Query Frame = 0


Query: 176 KRLPKRPAPPRFGRKLTDAQKAKATHICLDCGYIYTLSKPFDEQPDGYACPQCRAPKKRF 235
           K+   + + PRF  +++    +K  +IC DCGYIY    PFD+ PD Y CP C APK+RF
Sbjct: 43  KKSLSKSSAPRFSMRVS----SKQAYICRDCGYIYNDRTPFDKLPDNYFCPVCAAPKRRF 102

Query: 236 AKY-------------------DVNTGKAIGGGLPPIGVIAGLVAGIGAVGALLVY 273
             Y                   ++   +A+G  LP      G+  G+ A+ AL  Y
Sbjct: 103 RAYMPDVSKNVNDKDVRKARKAELQRDEAVGKALP-----IGIAVGVLALAALYFY 149

[Close]

BLAST of HG10009398 vs. TAIR 10
Match: AT1G55480.1 (protein containing PDZ domain, a K-box domain, and a TPR region )

HSP 1 Score: 57.8 bits (138), Expect = 1.6e-08
Identity = 35/101 (34.65%), Postives = 55/101 (54.46%), Query Frame = 0


Query: 74  RGLQIRAAKTAGASK--------------TIEVEVDKPLGLTLGQKSGGGVVITAVDGGG 133
           R L ++A++T  ++K              T E+EV++P GL   +   GG  I A+  GG
Sbjct: 59  RNLALKASETESSAKAEAGGDGEEEEKYETYEIEVEQPYGLKFRKGRDGGTYIDAILPGG 118

Query: 134 NAAKSG-LKAGDQVLYTSSFFGDELWPADKLGFTKTAIQAK 160
           +A K+G    GD+V+ TS+ FG E+WPA + G T   I+ +
Sbjct: 119 SADKTGKFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQR 159

The following BLAST results are available for this feature:

BLAST of HG10009398 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906692.1	1.6e-146	98.55	uncharacterized protein LOC120092622 [Benincasa hispida]	[more]
XP_004143657.1	1.8e-134	92.39	uncharacterized protein LOC101215685 [Cucumis sativus] >KGN50362.1 hypothetical ...	[more]
XP_008467304.1	3.1e-134	93.48	PREDICTED: uncharacterized protein LOC103504684 [Cucumis melo] >KAA0055114.1 unc...	[more]
XP_023549894.1	4.1e-131	89.82	uncharacterized protein LOC111808255 [Cucurbita pepo subsp. pepo]	[more]
XP_022928804.1	5.4e-131	89.45	uncharacterized protein LOC111435615 [Cucurbita moschata]	[more]

BLAST of HG10009398 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94BS2	2.3e-07	34.65	Protein MET1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MET1 PE=1 SV=1	[more]

BLAST of HG10009398 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPK9	8.7e-135	92.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G168980 PE=4 SV=1	[more]
A0A5A7UIZ1	1.5e-134	93.48	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3CT84	1.5e-134	93.48	uncharacterized protein LOC103504684 OS=Cucumis melo OX=3656 GN=LOC103504684 PE=...	[more]
A0A6J1ELX2	2.6e-131	89.45	uncharacterized protein LOC111435615 OS=Cucurbita moschata OX=3662 GN=LOC1114356...	[more]
A0A6J1HX71	1.7e-130	89.09	protein MET1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111468855 PE=...	[more]

BLAST of HG10009398 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17170.1	2.3e-103	73.78	rubredoxin family protein	[more]
AT5G17170.2	1.7e-61	68.42	rubredoxin family protein	[more]
AT5G51010.1	3.0e-10	32.76	Rubredoxin-like superfamily protein	[more]
AT1G55480.1	1.6e-08	34.65	protein containing PDZ domain, a K-box domain, and a TPR region	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036034	PDZ superfamily	GENE3D	2.30.42.10		coord: 82..172 e-value: 6.3E-7 score: 31.2
IPR036034	PDZ superfamily	SUPERFAMILY	50156	PDZ domain-like	coord: 89..134
None	No IPR available	GENE3D	2.20.28.10		coord: 199..236 e-value: 2.6E-8 score: 35.5
None	No IPR available	PANTHER	PTHR35498	PROTEIN LOW PSII ACCUMULATION 1, CHLOROPLASTIC	coord: 1..275
None	No IPR available	PANTHER	PTHR35498:SF5	RUBREDOXIN FAMILY PROTEIN	coord: 1..275
None	No IPR available	CDD	cd00992	PDZ_signaling	coord: 89..133 e-value: 5.09201E-7 score: 44.4799
None	No IPR available	CDD	cd00350	rubredoxin_like	coord: 201..238 e-value: 6.10509E-7 score: 42.9252
None	No IPR available	SUPERFAMILY	57802	Rubredoxin-like	coord: 199..241
IPR024934	Rubredoxin-like domain	PROSITE	PS50903	RUBREDOXIN_LIKE	coord: 198..238 score: 10.25147
IPR001478	PDZ domain	PROSITE	PS50106	PDZ	coord: 87..133 score: 9.4911

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10009398.1	HG10009398.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0005515	protein binding