HG10009382 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10009382
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	SWR1 complex subunit 2
Location	Chr06: 5299788 .. 5306251 (+)
RNA-Seq Expression	HG10009382
Synteny	HG10009382

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCCTCCAAAGAAGAAGATGCTCCCGTTTTTCTTGATCGTTCTTCTCGATTGACTAGAGGAAAGAGGTACCGGGCTACTTTCTTAGCTTTTCTTTTCTTTTCTTGGGGGTGGGTGTTATTGTAAATTGGCAATGAACTGATGCAAGATGTTTCAAATTGTATGTATTTATGAATTGGGGTATTTTTATTTGTTATAGGATGACCAAGTTGCTTGATGAGGAAGTTGAAGACGACGAGTTGTTTTGGAATCAGGATGCTCTCAAAGAGGTATATTTAAAGAGGTTTAATCTTTTTTCTTCTCTAGGATCGATATGAAGTTATAATCGCTTCTCTTTGCTTTTGGCTAGTTAATAATAAGATTGTGATTACAATAATGCAATGTGTTTTTTCTGTTTCACCCATTTCGTATACACTCGATTAATCTTCAATTTTGAAGATTTCCACATCCACTTAGATTTAGTTAAACAGTTTGATTTCCGTCTTACAACGCCATGGTCTGGATGGCCTCCGTTAGATTGCTGCAATGTGTCCACTCAATTATGTGGATTGAGTTTTGACTAAATTAAATATCCTTTCTGAACTTGTCCATCTTCAAAAATACGTTGCAGGATGAGGTTGATGACGAATATGAAGAAGAACCTGAGGTTGCTGATGAATTTGATAGTGATTTCAATGAAGATGTAAGTTATGTTCAGATCCTTTTTCACGGCTTATTCTGTTCAACCATAAAATGTTTTTCATAACATGACTATTTTTTATGGACAGGAGTCTGAACCAGAGGAAGAAGCTGAGAATGAAGCAGATGAGAGGTTTTCTCTTCTCTGAAGTGCTTGGATGATAGATATATTTCAATTTTCTGTTTTAAAATTGAGTTTTTTTCCAGAACACAAACAAAGAAGCGATTAATATTTCCCGGAAAGACTTCTTCTAAGAACAAGAATAAAAAGAGAGTTGTTTCCAAAATTGAGAAACCTTCCAAAGATGAAGCATCAACTGATCACTCTACGCCTCCTGAACATCATGATACACCGGATGATACTGAAGTTGAGAGAACAGTGAGAAAATCCACTAGAACTTCAGTTATTGTTAGGCAAGCTGAGAGGGATGCTATTCGTGCGGCTTTGCAAGCCACAATGAAGGTGAGTACTGAATACTTGAGACATGTGATTTGTAGGATGAAGACAAAACCATTTTTCGTTAGAGTAATTTGAGCTTTTCTTGAAGGCAGTTTCTTGATTGAATAGGGTCAGGGTGATGCTATGATAAAGTGTAAACGTCTATTTTGGTTCATATATCCTCCAACTACTTGAAAAAATGTCGTCATCCTATAAATTTTTTACTCATTTATTGTGCCACGTCAGAACATTAGTTTCAATATGTAGATCCATTATGTGTACAAGAGATGAGGTGTATGAGGGATGAGGTCATGGGTTCAATCCATGGTGGCCACCTACCTAAGAATTAATTTCCTACGAGTTTTCTTGACACCCAAATATTGTAGGGTCAGGCGGGCTGTCCCGTGATTAGTCTAGGTGCGCGTAAGCTGGCCCGGACACTCACGGATATCAAAAAAAAAAAATGAAAATATAAAACAGAATCTTCTGAGCTCTAATTACTTTGTTTGGAATAACTTTGAATTTTATGACACCCAAAAAGTGGTTTTCCATTTATTTGGTTTTAGTGGTGTTTGAGTAGGTAAAACGAAAAGTTCGTTTTTGTTTTAGATAATGTGTTCTCCTAAGAAAGTTATTGGACTAGTTTACTATTTTGATGTATACACTTCAGGTCCAAAAGTTTAAAACCACTGCCCTTCATACCAAGGGAATATTTTTTTTCTAGATACGACAATTGACCCTGTATTCAGGAGAGTAAGAAATCAGTACAGTTGATAAGACGTCCACCCTAAGCCAAAGGTGCTTATAAAAAGTCTCCCAGTTTGTTTTTTTTTCCTTGGAGATGCTTTACTTTCCTCTAATCCAAATCTTCTATATGCAAGCCTTAATATCCTTATCAAATGAATTCATGTCCTATCTATGTGGTTCTAATTATTAATCGCACATTTTTTTCCTGCTTTCTCAAAAAGTTCCTTTCCTGCTTCTTTTCCTGCAATGTTCAATATTATTCTTGTGTTTGCCATCAAATAATTTCCCCAAAATGATTGTTTTTAGTATTAGATATGAGTGAGACTGTATCCTTTCTTGTCCACCAGCCAATCAAGAGGAAAAATCCAGGTGAGGAGAAGAAGATGAGTCAGGAAGAAATGCTTCTTGAAGCTGCTCAAACAGGTGAAACTGATGGTTAATGTATGCTGTTGTAAGTTGCAACACTAGGTGGATACTTGAAGGAATCTTCTCATTTTCTCTTGAATTATTTCAACCTTCCATATCTAAGAAATCATGAACTTGAGGAATTTGGAGCGTGTTTTGGCAAGGGAAGAAGAAGTAAAAAAGAGAGCAATTGTGCATAAAGCTGTGTACAATGGTCCACGGATACAATACTTGTCAAGAAATGGTACCATCTGAAGTGTGATTCAAAATTTTGTTCTTTCAAAAAAGAACTTGTCCATGTTCAGAATTAAGTTACATTGGTGTATTTTGTTGCAGGTTGCTCATATCTAGAGTTTAGTAAAGGGTCATCGTTTCAGGCAGAGCTTTCAACCACATCAGTTCCATGTAATTAATTACTTATGTATAATCGTCCATCCAATATTATATTGAATACAAAATTACGGCCCGGATGCTCACGAATATCAAAAAAAAAAAAAAAAAAGGCTAATGCTTAAAAGACACAAACTCCAAAAGGGAGATCAAAGGAAAATGAAAGGCATGATTAATGAAAGATAAAAGGGAAATAAAAAGCAATAATTAATGAAAGATAAAAGACTTCCTAATTCGTACTAATTTCTTGCAAAGAGAAGTAAAAGAATGATTTAGAAAGAGAACACTATCAAGAAGCTTTACATCTAGCCATCTTGAAAAGATCATACTAATGCTTCTAAAAGATCTCAAAACCTTTTTGTTACTAGTTTTTTAGGTAATAGCCTTTATTGCATGAATTCTCAAGCATTGTTAATTCAGCAATATTTTCCCAGCGTCTTGCTTCCTTGTCTTCACAGGGTCTTTTTCATTCTATTAAATTTGTTTTCTGTCAAAATGAAAAAAGAATGTGGATCTTGTTCTGACCAGAATCTTGTCCCCTAAATTTGAGTGCCTTTTCATCAGCTCCACTGGTTTCCCACTTTCAGTAACTTCTCAAATTTTCAATGAAAAGTAAGACTTCTTATGAGAAACATTGTTCTTTTCCCTTTTCTAAAGTCTAAGTACGATGAGTTAAAAAACAAATGGATCAGATTTAGTTCTGAGAGCTAATGTCCCTTGGAATGTGCCATTAGGTTATCAAATTCATTCCATTAAGTTTTAGTTTTTCTCTTCCTCTTCCTTTGTATTTGAAGAACATGTAGGTTCTGATCTTACCTTGTTCTGTATTCTGTTATGCATACAATTATTCATTTCATATCCCAGGAAAAGAAAATGAAACACATGGAGAGAATCTTGTATACTATTTTGCATTGTAAGTATTCATTTTTTAAAGTTTAGAACCTAAATATATTTCTCTTCCCTTTTTCTTTCTAGATCCAGAGAAAGCTGTATGTGTGATTACAGGTTTGCCTGCGAGGTAAGATCTCATTGCCATTTGTTTCTTCGTAGTTTGTCAGCCTAGTTGAATTGTTTGCAATCGACATAGTCCAATTCCTTGAAATTTACTTTATGATGGTAACTGTTAAAGATAGATCCTGTGGTTCCAGAGATTAGAAGAGGTTATCATTGTTATTTTAAATAGTAAAGTGCGTGAAAAGGTGCAATCCTTGGAGCTTTAAACACAGGGTAGAAAAAGGGTTACCTTATGCGACTAAAGAAGCTTTTAATTCTGTAGGATATTGCTCCTAAGAACAGTAATTACGTAAGCTATCAAAAACTGAACAATTCTGCAGTCTAATTAATGCTTTTTATGCTGAAGGTATCGTGACCCAAAGACAGGGTTGCCTTATGCAACTAAAGAAGCTTTCAAGACAATCCGTGAACGGTATAGCTCTTCTTGCTTATTTTTGGGTTTTGATTTATTCATTATATTATAGCTGAGAGTTTCTATACTTCTCACTTCACTTCAATTTCTTTAAGTTTCTTTAATTCTGCATTAAAATAGTTTCTTCACTGTATTATATGTCAATATTGTGTATAAACGAGACATGAAAATGTTGGGTGGAAGGGTGACTGATGATAAAAAGTTTAGAGAAAAATCAATTAATTCATTTTTGCCTGCGACGTCTTAACTTTCATTCTGATGTCACTGGAATGGTCAAACAATTTAATTAATTTCCCAAAGTTATGTACATCCAGGGTCCGGGAAGCCTAGCCTTCATTAGGGGAGGCTTTTACTTTGAGAATAAGGCTAGATTACAAAGATACAAGTATTTGTGATATTGGAATTAGTTCAATGACAGAAACATTTAGTTCCATTCTTTTGAGTACCGAAATCGGCCCAATCATCCTCTTATTATAAGAGCATGGAACCTGTTTTAATATAGATGGTAATTCAGAGTCTTGGTAATTTGTAACCCGTTTCTTCTAAAGGTGTCTCTGTGATCATGGTAATTCAGAGGTTAATATTATGAAAAAAGCTGAAAGAGTAGCTCAACTCTTTCAATTATCTGCACTGAATTGTAAGGAAGATGTTCTTTATTAAGGCTCCTGCTTTACTCGATTACCCCAAATTGATCATTTTATTTTATCCTTCCATGAGTCCAGTATCTCACTAATTGCTGATGTGATGCAGTTTTGCGGATGATGGTAAGGGAGCCAAGGAAATGGACATGGGATATTTATTTGCTTCACTTTCTGGTAATGGGTTCTCAGCAAGGCGGAAGAGATCAACTCCTCAAAATAAAAATGAAATGTCCTACTTTCGCCACTTCTCTCATTTTCGCCAAATTCCAGCATTTGATTCTGAACTTTCTGATTAGTTTTTCAAGGTACTATAGTTAATTCCCTTACGGCCAAACTTTTTAATGCATGTTCTGCCATTCCATGTTCATGAACTGTTATCATTATTATTTTAAATAACCACAGTTTGTTGTTCGAGATGGTATGGGATGGGAGAGGATACAGTATTTTGATTTCAACACTGGAATAGGCGTGTCCTTGAAGACATTGGCTTTGGTTACCTTAGAAACTGGAATATAGAACCGAATTTTCTTACTCCTTAGGTTTCATGACAAGAGAATTTCAGAACCTAATGCCTCAGTTTTTAGGGGTCTTTTTGGGGGTGCAGTTTGTGGTGTTAGCAGTTCCTACAACAATTCAGCTTCTCTGTTCTGCTACCATTGCTAGGCAGGTTCCTATTTTACATACTTGGCCATCTCTTGGGCGATGTGTTCTTGACAGAGCTTTCAAATGTGTTCTTGATGATCGGTAGTTTCGGGGCGAAATTGTTGTGCCACAACCATTCTTGAGGAATGACTTTGTCCAATGTTGTTCTTATAATACTGTATTTGCGTTTTTTGTTTGGATTTTGTATACAATTCTCTGTAATCTTGGTAAGGTGTTATTGTCATATCGATTCTGATTTATTTTGAAAAAATTAGGAAGAAACCAAGTACATTGTTTCAGTCTCCATTTTCTTAAGGGTTATGGAGCAGAAAAATACAAAAATATTTTTGAAAAAAAGTTTTATCACGTAACTAATAAACTTGGTCAGACAACTAGGTCCAAAAAGATGATGTACCCAAGTTTTTTTTTTTTTTTTTTTTTCTTGAATAAAATGCTCAACACTGGAAAATAACATAAACATATCACATATGAATCAATATTTTCATTGTATCTAAGAATTGACCGAATAGAACAAAATGTTGTTATCATTATTTTTAACAACATTGATGGACTCATATTATTATTATTCAATCAAATTCTTAGTTAAAATTTAGACTAAAAGTAGATCATGTCTCTACAAAAATATACTCTACATGTACAAATATAAATAGGCTTGAATATTGAATATGGTTCCACAAATTTTCAACTTTGTTCCATTTTAGCCCTTCAACTTTGAAAATGACAATAAATCTCTAAACTAAATAATAATAATAAAAAACTATTTTAGTCCTTTATGGAATGTTGGGGGTAAGTGAAATAGTGAGAAATAAAAAGTTATGAAATCTAGAGACAGAAATTGATAAGATATAAAATTGATATTTTTTTTAGTAGTGAGACCCACCAACTCCATGGACCAAACAAAGAGTGGAGTTCACAAACTTCCACTTTCCAACTCCTTGGGCCAAACACTCTTAATGAGTTAGAATGGCTTCCGGCTAGTACTTTAAATCAAATGTTCGACCTGGGGCTGAGAATTTTGGACGGAGAAAACATCAACCGCTGCTTCAGTGCCCCTTCATTCATAATCATGTAA

mRNA sequence

ATGGATTCCTCCAAAGAAGAAGATGCTCCCGTTTTTCTTGATCGTTCTTCTCGATTGACTAGAGGAAAGAGGTACCGGGCTACTTTCTTAGCTTTTCTTTTCTTTTCTTGGGGGATGACCAAGTTGCTTGATGAGGAAGTTGAAGACGACGAGTTGTTTTGGAATCAGGATGCTCTCAAAGAGGATGAGGTTGATGACGAATATGAAGAAGAACCTGAGGTTGCTGATGAATTTGATAGTGATTTCAATGAAGATGAGTCTGAACCAGAGGAAGAAGCTGAGAATGAAGCAGATGAGAGAACACAAACAAAGAAGCGATTAATATTTCCCGGAAAGACTTCTTCTAAGAACAAGAATAAAAAGAGAGTTGTTTCCAAAATTGAGAAACCTTCCAAAGATGAAGCATCAACTGATCACTCTACGCCTCCTGAACATCATGATACACCGGATGATACTGAAGTTGAGAGAACAGTGAGAAAATCCACTAGAACTTCAGTTATTGTTAGGCAAGCTGAGAGGGATGCTATTCGTGCGGCTTTGCAAGCCACAATGAAGCCAATCAAGAGGAAAAATCCAGGTGAGGAGAAGAAGATGAGTCAGGAAGAAATGCTTCTTGAAGCTGCTCAAACAGAAATCATGAACTTGAGGAATTTGGAGCGTGTTTTGGCAAGGGAAGAAGAAGTAAAAAAGAGAGCAATTGTGCATAAAGCTGTGTACAATGGTCCACGGATACAATACTTGTCAAGAAATGGTTGCTCATATCTAGAGTTTAGTAAAGGGTCATCGTTTCAGGCAGAGCTTTCAACCACATCAGTTCCATATCCAGAGAAAGCTGTATGTGTGATTACAGGTTTGCCTGCGAGGTATCGTGACCCAAAGACAGGGTTGCCTTATGCAACTAAAGAAGCTTTCAAGACAATCCGTGAACGTAGTGAGACCCACCAACTCCATGGACCAAACAAAGAGTGGAGTTCACAAACTTCCACTTTCCAACTCCTTGGGCCAAACACTCTTAATGAGTTAGAATGGCTTCCGGCTAGTACTTTAAATCAAATGTTCGACCTGGGGCTGAGAATTTTGGACGGAGAAAACATCAACCGCTGCTTCAGTGCCCCTTCATTCATAATCATGTAA

Coding sequence (CDS)

ATGGATTCCTCCAAAGAAGAAGATGCTCCCGTTTTTCTTGATCGTTCTTCTCGATTGACTAGAGGAAAGAGGTACCGGGCTACTTTCTTAGCTTTTCTTTTCTTTTCTTGGGGGATGACCAAGTTGCTTGATGAGGAAGTTGAAGACGACGAGTTGTTTTGGAATCAGGATGCTCTCAAAGAGGATGAGGTTGATGACGAATATGAAGAAGAACCTGAGGTTGCTGATGAATTTGATAGTGATTTCAATGAAGATGAGTCTGAACCAGAGGAAGAAGCTGAGAATGAAGCAGATGAGAGAACACAAACAAAGAAGCGATTAATATTTCCCGGAAAGACTTCTTCTAAGAACAAGAATAAAAAGAGAGTTGTTTCCAAAATTGAGAAACCTTCCAAAGATGAAGCATCAACTGATCACTCTACGCCTCCTGAACATCATGATACACCGGATGATACTGAAGTTGAGAGAACAGTGAGAAAATCCACTAGAACTTCAGTTATTGTTAGGCAAGCTGAGAGGGATGCTATTCGTGCGGCTTTGCAAGCCACAATGAAGCCAATCAAGAGGAAAAATCCAGGTGAGGAGAAGAAGATGAGTCAGGAAGAAATGCTTCTTGAAGCTGCTCAAACAGAAATCATGAACTTGAGGAATTTGGAGCGTGTTTTGGCAAGGGAAGAAGAAGTAAAAAAGAGAGCAATTGTGCATAAAGCTGTGTACAATGGTCCACGGATACAATACTTGTCAAGAAATGGTTGCTCATATCTAGAGTTTAGTAAAGGGTCATCGTTTCAGGCAGAGCTTTCAACCACATCAGTTCCATATCCAGAGAAAGCTGTATGTGTGATTACAGGTTTGCCTGCGAGGTATCGTGACCCAAAGACAGGGTTGCCTTATGCAACTAAAGAAGCTTTCAAGACAATCCGTGAACGTAGTGAGACCCACCAACTCCATGGACCAAACAAAGAGTGGAGTTCACAAACTTCCACTTTCCAACTCCTTGGGCCAAACACTCTTAATGAGTTAGAATGGCTTCCGGCTAGTACTTTAAATCAAATGTTCGACCTGGGGCTGAGAATTTTGGACGGAGAAAACATCAACCGCTGCTTCAGTGCCCCTTCATTCATAATCATGTAA

Protein sequence

MDSSKEEDAPVFLDRSSRLTRGKRYRATFLAFLFFSWGMTKLLDEEVEDDELFWNQDALKEDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTSSKNKNKKRVVSKIEKPSKDEASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIQYLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAVCVITGLPARYRDPKTGLPYATKEAFKTIRERSETHQLHGPNKEWSSQTSTFQLLGPNTLNELEWLPASTLNQMFDLGLRILDGENINRCFSAPSFIIM

Homology

[Close]

BLAST of HG10009382 vs. NCBI nr
Match: XP_038907261.1 (SWR1 complex subunit 2 isoform X1 [Benincasa hispida] >XP_038907262.1 SWR1 complex subunit 2 isoform X1 [Benincasa hispida] >XP_038907263.1 SWR1 complex subunit 2 isoform X1 [Benincasa hispida] >XP_038907264.1 SWR1 complex subunit 2 isoform X1 [Benincasa hispida] >XP_038907265.1 SWR1 complex subunit 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 533.9 bits (1374), Expect = 1.1e-147
Identity = 293/310 (94.52%), Postives = 296/310 (95.48%), Query Frame = 0


Query: 1   MDSSKEEDAPVFLDRSSRLTRGKRYRATFLAFLFFSWGMTKLLDEEVEDDELFWNQDALK 60
           MDSSKEEDAPVFLDRSSRLTRGKR              MTKLLDEEVE+DELFWNQDALK
Sbjct: 1   MDSSKEEDAPVFLDRSSRLTRGKR--------------MTKLLDEEVEEDELFWNQDALK 60

Query: 61  EDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTSSKNKNK 120
           EDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTSSKNKNK
Sbjct: 61  EDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTSSKNKNK 120

Query: 121 KRVVSKIEKPSKDEASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAAL 180
           KRVVSK+EKPSKDEASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAAL
Sbjct: 121 KRVVSKVEKPSKDEASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAAL 180

Query: 181 QATMKPIKRKNPGEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYN 240
           QATMKPIKRKNPGEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYN
Sbjct: 181 QATMKPIKRKNPGEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYN 240

Query: 241 GPRIQYLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAVCVITGLPARYRDPKTGLPYAT 300
           GPRI+YLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAVCVITGLPARYRDPKTGLPYAT
Sbjct: 241 GPRIRYLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAVCVITGLPARYRDPKTGLPYAT 296

Query: 301 KEAFKTIRER 311
           KEAFKTIRER
Sbjct: 301 KEAFKTIRER 296

[Close]

BLAST of HG10009382 vs. NCBI nr
Match: XP_022970136.1 (SWR1 complex subunit 2 [Cucurbita maxima] >XP_022970137.1 SWR1 complex subunit 2 [Cucurbita maxima])

HSP 1 Score: 518.1 bits (1333), Expect = 6.5e-143
Identity = 287/310 (92.58%), Postives = 291/310 (93.87%), Query Frame = 0


Query: 1   MDSSKEEDAPVFLDRSSRLTRGKRYRATFLAFLFFSWGMTKLLDEEVEDDELFWNQDALK 60
           MDSSKEEDA VFLDRSSRLTRGKR              MTKLLD+E+E+DELFWNQDALK
Sbjct: 1   MDSSKEEDASVFLDRSSRLTRGKR--------------MTKLLDDELEEDELFWNQDALK 60

Query: 61  EDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTSSKNKNK 120
           EDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKT SKNKNK
Sbjct: 61  EDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTPSKNKNK 120

Query: 121 KRVVSKIEKPSKDEASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAAL 180
           KRVVSKIEK SKDEASTD STPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAAL
Sbjct: 121 KRVVSKIEKSSKDEASTDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAAL 180

Query: 181 QATMKPIKRKNPGEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYN 240
           QATMKPIKRKNPGEEKKMSQE+MLLEAAQTEIMNLRNLERVLAREEEVKKRAIV KAVYN
Sbjct: 181 QATMKPIKRKNPGEEKKMSQEDMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVQKAVYN 240

Query: 241 GPRIQYLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAVCVITGLPARYRDPKTGLPYAT 300
           GPRIQYLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAVCVITGLPARYRDPKTGLPYAT
Sbjct: 241 GPRIQYLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAVCVITGLPARYRDPKTGLPYAT 296

Query: 301 KEAFKTIRER 311
           KEAFKTIRER
Sbjct: 301 KEAFKTIRER 296

[Close]

BLAST of HG10009382 vs. NCBI nr
Match: KAG6579641.1 (SWR1 complex subunit 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 518.1 bits (1333), Expect = 6.5e-143
Identity = 287/310 (92.58%), Postives = 291/310 (93.87%), Query Frame = 0


Query: 1   MDSSKEEDAPVFLDRSSRLTRGKRYRATFLAFLFFSWGMTKLLDEEVEDDELFWNQDALK 60
           MDSSKEEDA VFLDRSSRLTRGKR              MTKLLD+E+E+DELFWNQDALK
Sbjct: 1   MDSSKEEDASVFLDRSSRLTRGKR--------------MTKLLDDELEEDELFWNQDALK 60

Query: 61  EDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTSSKNKNK 120
           EDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKT SKNKNK
Sbjct: 61  EDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTPSKNKNK 120

Query: 121 KRVVSKIEKPSKDEASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAAL 180
           KRVVSKIEK SKDEASTD STPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAAL
Sbjct: 121 KRVVSKIEKSSKDEASTDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAAL 180

Query: 181 QATMKPIKRKNPGEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYN 240
           QATMKPIKRKNPGEEKKMSQE+MLLEAAQTEIMNLRNLERVLAREEEVKKRAIV KAVYN
Sbjct: 181 QATMKPIKRKNPGEEKKMSQEDMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVQKAVYN 240

Query: 241 GPRIQYLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAVCVITGLPARYRDPKTGLPYAT 300
           GPRIQYLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAVCVITGLPARYRDPKTGLPYAT
Sbjct: 241 GPRIQYLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAVCVITGLPARYRDPKTGLPYAT 296

Query: 301 KEAFKTIRER 311
           KEAFKTIRER
Sbjct: 301 KEAFKTIRER 296

[Close]

BLAST of HG10009382 vs. NCBI nr
Match: XP_023550830.1 (SWR1 complex subunit 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 516.5 bits (1329), Expect = 1.9e-142
Identity = 286/310 (92.26%), Postives = 291/310 (93.87%), Query Frame = 0


Query: 1   MDSSKEEDAPVFLDRSSRLTRGKRYRATFLAFLFFSWGMTKLLDEEVEDDELFWNQDALK 60
           MDSSKEEDA VFLDRSSRLTRGKR              MTKLLD+E+E+DELFWNQDALK
Sbjct: 1   MDSSKEEDASVFLDRSSRLTRGKR--------------MTKLLDDELEEDELFWNQDALK 60

Query: 61  EDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTSSKNKNK 120
           EDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKT SKNKNK
Sbjct: 61  EDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTPSKNKNK 120

Query: 121 KRVVSKIEKPSKDEASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAAL 180
           KRVVSKIEK SKDEASTD STPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAAL
Sbjct: 121 KRVVSKIEKSSKDEASTDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAAL 180

Query: 181 QATMKPIKRKNPGEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYN 240
           QATMKPIKRKNPGEEKKMSQE+MLLEAAQTEIMNLRNLERVLAREEEVKKRAIV KAVYN
Sbjct: 181 QATMKPIKRKNPGEEKKMSQEDMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVQKAVYN 240

Query: 241 GPRIQYLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAVCVITGLPARYRDPKTGLPYAT 300
           GPRIQYLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAVCVITGLPARYRDPKTGLPYAT
Sbjct: 241 GPRIQYLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAVCVITGLPARYRDPKTGLPYAT 296

Query: 301 KEAFKTIRER 311
           KEAFK+IRER
Sbjct: 301 KEAFKSIRER 296

[Close]

BLAST of HG10009382 vs. NCBI nr
Match: KAA0055098.1 (SWR1 complex subunit 2 [Cucumis melo var. makuwa])

HSP 1 Score: 516.5 bits (1329), Expect = 1.9e-142
Identity = 287/310 (92.58%), Postives = 289/310 (93.23%), Query Frame = 0


Query: 1   MDSSKEEDAPVFLDRSSRLTRGKRYRATFLAFLFFSWGMTKLLDEEVEDDELFWNQDALK 60
           MDSSKEED PVFLDRSSRLTRGKR              MTKLLDEE E+DELFWNQDALK
Sbjct: 1   MDSSKEEDVPVFLDRSSRLTRGKR--------------MTKLLDEEAEEDELFWNQDALK 60

Query: 61  EDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTSSKNKNK 120
           EDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEA+ERTQ KKRLIFPGKT SKNKNK
Sbjct: 61  EDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEAEERTQMKKRLIFPGKT-SKNKNK 120

Query: 121 KRVVSKIEKPSKDEASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAAL 180
           KR VSKIEKPSKDEASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAAL
Sbjct: 121 KRAVSKIEKPSKDEASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAAL 180

Query: 181 QATMKPIKRKNPGEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYN 240
           QATMKPIKRKNPGEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYN
Sbjct: 181 QATMKPIKRKNPGEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYN 240

Query: 241 GPRIQYLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAVCVITGLPARYRDPKTGLPYAT 300
           GPRI YLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKA CVITGLPARYRDPKTGLPYAT
Sbjct: 241 GPRICYLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAACVITGLPARYRDPKTGLPYAT 295

Query: 301 KEAFKTIRER 311
           KEAFKTIRER
Sbjct: 301 KEAFKTIRER 295

[Close]

BLAST of HG10009382 vs. ExPASy Swiss-Prot
Match: F4IP06 (SWR1 complex subunit 2 OS=Arabidopsis thaliana OX=3702 GN=SWC2 PE=1 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.9e-97
Identity = 208/312 (66.67%), Postives = 246/312 (78.85%), Query Frame = 0


Query: 6   EEDAPVFLDRSSRLTRGKRYRATFLAFLFFSWGMTKLLDEEVEDDELFWNQDALKEDEVD 65
           EE+  VFLDR++R TRGKR              MTKLLD+EVE+DE FWNQ+ALKE+E D
Sbjct: 5   EEEPMVFLDRTTRATRGKR--------------MTKLLDDEVEEDEQFWNQEALKEEEHD 64

Query: 66  DEYEEEPEVADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTSSKNKNKK-RVV 125
           DEYE E EVADEFDSDFN+DE EP+  A NE + R   KKRLI+PGKT+SK K KK +VV
Sbjct: 65  DEYEAEREVADEFDSDFNDDEPEPDAVAVNEKELRDLPKKRLIYPGKTASKKKKKKTKVV 124

Query: 126 SKI------EKPSKDEASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRA 185
           S++      EKP  +E         E ++  +D E E+ +RKSTRTSV+VRQAERDA+RA
Sbjct: 125 SQLEYIPGDEKPG-EELGNKEQEEKEENEAQEDMEGEKVIRKSTRTSVVVRQAERDALRA 184

Query: 186 ALQATMKPIKRKNPGEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAV 245
           A+QAT KPI+RK  GEEK+M+QEEMLLEAAQTEIMNLRNLERVLAREEEVKK+AIVHKAV
Sbjct: 185 AIQATTKPIQRKKVGEEKRMTQEEMLLEAAQTEIMNLRNLERVLAREEEVKKKAIVHKAV 244

Query: 246 YNGPRIQYLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAVCVITGLPARYRDPKTGLPY 305
           Y GP+I+Y S++GC+YLEF  G+SF +ELST SVPYPEKAVCVITGLPA+YRDPKTGLPY
Sbjct: 245 YKGPQIRYHSKDGCNYLEFCNGASFNSELSTKSVPYPEKAVCVITGLPAKYRDPKTGLPY 301

Query: 306 ATKEAFKTIRER 311
           AT++AFK IRER
Sbjct: 305 ATRDAFKAIRER 301

[Close]

BLAST of HG10009382 vs. ExPASy Swiss-Prot
Match: Q9VKM6 (Vacuolar protein sorting-associated protein 72 homolog OS=Drosophila melanogaster OX=7227 GN=YL-1 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 4.4e-09
Identity = 90/305 (29.51%), Postives = 135/305 (44.26%), Query Frame = 0


Query: 42  LLDEEVEDDELFWNQDALKEDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEADERT 101
           LL+EE EDD    +    +EDE D EYE++ E  D  DSDF+ DE++     + EA E+ 
Sbjct: 18  LLNEEEEDDFYKTSYGGFQEDEEDKEYEQKDEEEDVVDSDFSIDENDEPVSDQEEAPEK- 77

Query: 102 QTKKRLIFPGKTSSKNKNKKRVVSKIEKPSKDEASTDHSTPPEHHDTPDDTEVER----- 161
             +KR +   K   + K        ++K +K       +TP  H   P     +R     
Sbjct: 78  -KRKRGVVNTKAYKETK------PAVKKETK-------ATPALHKKRPGGGVTKRRPRPR 137

Query: 162 -----TVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGEEKKMSQEEMLLEAAQTE 221
                + RKS RTS  ++          L    K  K+K   E+   +QEE+L EA  TE
Sbjct: 138 FTVLDSGRKSIRTSTAIKTQATKIRLKELDDARKRKKKKVRVEDYMPTQEELLEEAKITE 197

Query: 222 IMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIQYLSRNGCSYLEFSKGSS--------- 281
             N ++LE+    E E KK++   K  ++GP I+Y S    +  + ++G++         
Sbjct: 198 EENTKSLEKFQKMELE-KKKSRPTKRTFSGPTIRYHSLTMPAMRKPTRGANPAVDSKDLA 257

Query: 282 ------------------FQAELSTTSVPYPEKAVCVITGLPARYRDPKTGLPYATKEAF 310
                             FQ+     + P     +C IT LPARY DP T  PY + +AF
Sbjct: 258 GKCERTFVTIENDFNDKVFQSLFRHKAPPKASNGICPITRLPARYFDPITQQPYYSIQAF 306

[Close]

BLAST of HG10009382 vs. ExPASy Swiss-Prot
Match: Q5E9F6 (Vacuolar protein sorting-associated protein 72 homolog OS=Bos taurus OX=9913 GN=VPS72 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.7e-08
Identity = 90/316 (28.48%), Postives = 137/316 (43.35%), Query Frame = 0


Query: 39  MTKLLDEEVEDDELFWNQDALKEDEVDDEYE-EEPEVADEFDSDFNEDESEPEEEAENEA 98
           ++ LL++E ED+          E+  DDEY+ ++ +  DE DSDF+ DE + E  ++ EA
Sbjct: 17  LSGLLEKEEEDEFYQTTYGGFTEESGDDEYQGDQSDTEDEVDSDFDIDEGD-EPSSDGEA 76

Query: 99  DERTQTKKRLIFPGKTSSKNKNKKRVVSKIEKPSKDEASTDHSTPPEHHDTPDDTEVERT 158
           +E  + K+R++           + R VS     S+         P E  D  D T+  ++
Sbjct: 77  EE-PRRKRRVVTKAYKEPLKSLRPRKVSTPAGSSQKTREEKALLPLELQD--DGTDSRKS 136

Query: 159 VRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGEEKKMSQEEMLLEAAQTEIMNLRN 218
           +R+ST       +  R       +   +  +RK P  E+ ++QEE+L EA  TE +NLR+
Sbjct: 137 MRQST------AEHTRQTFLRVQERQGQSRRRKGPHCERPLTQEELLREAKITEELNLRS 196

Query: 219 LERVLAREEEVKKRAIVHKAVYNGPRIQYLS----------------------------- 278
           LE    R E  KK+ +  K    GP I Y S                             
Sbjct: 197 LE-TYERLEADKKKQVHKKRKCPGPIITYHSVTVPLVGEPGPKEENVDVEGLDPAPMASA 256

Query: 279 --------------RNGCSYLEFSKGSSFQAELSTTSVP-YPEKAVCVITGLPARYRDPK 310
                         R   +++ FS  ++F+        P  P + VC +T  PA YRDP 
Sbjct: 257 LAARAGTGPVIPPARCSRTFITFSDDATFEEWFPQGRTPKIPVREVCPVTHRPALYRDPV 316

[Close]

BLAST of HG10009382 vs. ExPASy Swiss-Prot
Match: Q5R5V9 (Vacuolar protein sorting-associated protein 72 homolog OS=Pongo abelii OX=9601 GN=VPS72 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.1e-07
Identity = 91/316 (28.80%), Postives = 133/316 (42.09%), Query Frame = 0


Query: 39  MTKLLDEEVEDDELFWNQDALKEDEVDDEYE-EEPEVADEFDSDFNEDESEPEEEAENEA 98
           ++ LL+ E ED+          E+  DDEY+ ++ +  DE DSDF+ DE + E  ++ EA
Sbjct: 17  LSGLLEAEEEDEFYQTTYGGFTEESGDDEYQGDQSDTEDEVDSDFDIDEGD-EPSSDGEA 76

Query: 99  DERTQTKKRLIFPGKTSSKNKNKKRVVSKIEKPSKDEASTDHSTPPEHHDTPDDTEVERT 158
           +E  + K+R++           + R VS     S+         P E  D   D+     
Sbjct: 77  EE-PRRKRRVVTKAYKEPLKSLRPRKVSTPAGSSQKAREEKALLPLELQDDGSDS----- 136

Query: 159 VRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGEEKKMSQEEMLLEAAQTEIMNLRN 218
            RKS R S    +  R       +   +  +RK P  E+ ++QEE+L EA  TE +NLR+
Sbjct: 137 -RKSMRQS--TAEHTRQTFLRVQERQGQSRRRKGPHCERPLTQEELLREAKITEELNLRS 196

Query: 219 LERVLAREEEVKKRAIVHKAVYNGPRIQYLS----------------------------- 278
           LE    R E  KK+ +  K    GP I Y S                             
Sbjct: 197 LE-TYERLEADKKKQVHKKRKCPGPIITYHSVTVPLVGEPGPKEENVDIEGLDPAPSASA 256

Query: 279 --------------RNGCSYLEFSKGSSFQAELSTTSVP-YPEKAVCVITGLPARYRDPK 310
                         R   +++ FS  ++F+        P  P + VC +T  PA YRDP 
Sbjct: 257 LTPHAGTGPVNPPARCSRTFITFSDDATFEEWFPQGRPPKVPVREVCPVTHRPALYRDPV 316

[Close]

BLAST of HG10009382 vs. ExPASy Swiss-Prot
Match: Q15906 (Vacuolar protein sorting-associated protein 72 homolog OS=Homo sapiens OX=9606 GN=VPS72 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 7.0e-07
Identity = 90/316 (28.48%), Postives = 133/316 (42.09%), Query Frame = 0


Query: 39  MTKLLDEEVEDDELFWNQDALKEDEVDDEYE-EEPEVADEFDSDFNEDESEPEEEAENEA 98
           ++ LL+ E ED+          E+  DDEY+ ++ +  DE DSDF+ DE + E  ++ EA
Sbjct: 17  LSGLLEAEEEDEFYQTTYGGFTEESGDDEYQGDQSDTEDEVDSDFDIDEGD-EPSSDGEA 76

Query: 99  DERTQTKKRLIFPGKTSSKNKNKKRVVSKIEKPSKDEASTDHSTPPEHHDTPDDTEVERT 158
           +E  + K+R++           + R V+     S+         P E  D   D+     
Sbjct: 77  EE-PRRKRRVVTKAYKEPLKSLRPRKVNTPAGSSQKAREEKALLPLELQDDGSDS----- 136

Query: 159 VRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGEEKKMSQEEMLLEAAQTEIMNLRN 218
            RKS R S    +  R       +   +  +RK P  E+ ++QEE+L EA  TE +NLR+
Sbjct: 137 -RKSMRQS--TAEHTRQTFLRVQERQGQSRRRKGPHCERPLTQEELLREAKITEELNLRS 196

Query: 219 LERVLAREEEVKKRAIVHKAVYNGPRIQYLS----------------------------- 278
           LE    R E  KK+ +  K    GP I Y S                             
Sbjct: 197 LE-TYERLEADKKKQVHKKRKCPGPIITYHSVTVPLVGEPGPKEENVDIEGLDPAPSVSA 256

Query: 279 --------------RNGCSYLEFSKGSSFQAELSTTSVP-YPEKAVCVITGLPARYRDPK 310
                         R   +++ FS  ++F+        P  P + VC +T  PA YRDP 
Sbjct: 257 LTPHAGTGPVNPPARCSRTFITFSDDATFEEWFPQGRPPKVPVREVCPVTHRPALYRDPV 316

[Close]

BLAST of HG10009382 vs. ExPASy TrEMBL
Match: A0A6J1HZS7 (SWR1 complex subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111469126 PE=3 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 3.1e-143
Identity = 287/310 (92.58%), Postives = 291/310 (93.87%), Query Frame = 0


Query: 1   MDSSKEEDAPVFLDRSSRLTRGKRYRATFLAFLFFSWGMTKLLDEEVEDDELFWNQDALK 60
           MDSSKEEDA VFLDRSSRLTRGKR              MTKLLD+E+E+DELFWNQDALK
Sbjct: 1   MDSSKEEDASVFLDRSSRLTRGKR--------------MTKLLDDELEEDELFWNQDALK 60

Query: 61  EDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTSSKNKNK 120
           EDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKT SKNKNK
Sbjct: 61  EDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTPSKNKNK 120

Query: 121 KRVVSKIEKPSKDEASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAAL 180
           KRVVSKIEK SKDEASTD STPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAAL
Sbjct: 121 KRVVSKIEKSSKDEASTDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAAL 180

Query: 181 QATMKPIKRKNPGEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYN 240
           QATMKPIKRKNPGEEKKMSQE+MLLEAAQTEIMNLRNLERVLAREEEVKKRAIV KAVYN
Sbjct: 181 QATMKPIKRKNPGEEKKMSQEDMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVQKAVYN 240

Query: 241 GPRIQYLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAVCVITGLPARYRDPKTGLPYAT 300
           GPRIQYLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAVCVITGLPARYRDPKTGLPYAT
Sbjct: 241 GPRIQYLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAVCVITGLPARYRDPKTGLPYAT 296

Query: 301 KEAFKTIRER 311
           KEAFKTIRER
Sbjct: 301 KEAFKTIRER 296

[Close]

BLAST of HG10009382 vs. ExPASy TrEMBL
Match: A0A5A7UJC3 (SWR1 complex subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00240 PE=3 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 9.1e-143
Identity = 287/310 (92.58%), Postives = 289/310 (93.23%), Query Frame = 0


Query: 1   MDSSKEEDAPVFLDRSSRLTRGKRYRATFLAFLFFSWGMTKLLDEEVEDDELFWNQDALK 60
           MDSSKEED PVFLDRSSRLTRGKR              MTKLLDEE E+DELFWNQDALK
Sbjct: 1   MDSSKEEDVPVFLDRSSRLTRGKR--------------MTKLLDEEAEEDELFWNQDALK 60

Query: 61  EDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTSSKNKNK 120
           EDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEA+ERTQ KKRLIFPGKT SKNKNK
Sbjct: 61  EDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEAEERTQMKKRLIFPGKT-SKNKNK 120

Query: 121 KRVVSKIEKPSKDEASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAAL 180
           KR VSKIEKPSKDEASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAAL
Sbjct: 121 KRAVSKIEKPSKDEASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAAL 180

Query: 181 QATMKPIKRKNPGEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYN 240
           QATMKPIKRKNPGEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYN
Sbjct: 181 QATMKPIKRKNPGEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYN 240

Query: 241 GPRIQYLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAVCVITGLPARYRDPKTGLPYAT 300
           GPRI YLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKA CVITGLPARYRDPKTGLPYAT
Sbjct: 241 GPRICYLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAACVITGLPARYRDPKTGLPYAT 295

Query: 301 KEAFKTIRER 311
           KEAFKTIRER
Sbjct: 301 KEAFKTIRER 295

[Close]

BLAST of HG10009382 vs. ExPASy TrEMBL
Match: A0A1S3CUJ8 (SWR1 complex subunit 2 OS=Cucumis melo OX=3656 GN=LOC103504701 PE=3 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 2.0e-142
Identity = 286/310 (92.26%), Postives = 289/310 (93.23%), Query Frame = 0


Query: 1   MDSSKEEDAPVFLDRSSRLTRGKRYRATFLAFLFFSWGMTKLLDEEVEDDELFWNQDALK 60
           MDSSKE+D PVFLDRSSRLTRGKR              MTKLLDEE E+DELFWNQDALK
Sbjct: 1   MDSSKEDDVPVFLDRSSRLTRGKR--------------MTKLLDEEAEEDELFWNQDALK 60

Query: 61  EDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTSSKNKNK 120
           EDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEA+ERTQ KKRLIFPGKT SKNKNK
Sbjct: 61  EDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEAEERTQMKKRLIFPGKT-SKNKNK 120

Query: 121 KRVVSKIEKPSKDEASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAAL 180
           KR VSKIEKPSKDEASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAAL
Sbjct: 121 KRAVSKIEKPSKDEASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAAL 180

Query: 181 QATMKPIKRKNPGEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYN 240
           QATMKPIKRKNPGEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYN
Sbjct: 181 QATMKPIKRKNPGEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYN 240

Query: 241 GPRIQYLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAVCVITGLPARYRDPKTGLPYAT 300
           GPRI YLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKA CVITGLPARYRDPKTGLPYAT
Sbjct: 241 GPRICYLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAACVITGLPARYRDPKTGLPYAT 295

Query: 301 KEAFKTIRER 311
           KEAFKTIRER
Sbjct: 301 KEAFKTIRER 295

[Close]

BLAST of HG10009382 vs. ExPASy TrEMBL
Match: A0A6J1EM84 (SWR1 complex subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111435683 PE=3 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 3.5e-142
Identity = 286/310 (92.26%), Postives = 290/310 (93.55%), Query Frame = 0


Query: 1   MDSSKEEDAPVFLDRSSRLTRGKRYRATFLAFLFFSWGMTKLLDEEVEDDELFWNQDALK 60
           MDSSKEEDA VFLDRSSRLTRGKR              MTKLLD+E+E+DELFWNQDALK
Sbjct: 1   MDSSKEEDASVFLDRSSRLTRGKR--------------MTKLLDDELEEDELFWNQDALK 60

Query: 61  EDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTSSKNKNK 120
           EDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKT SKNKNK
Sbjct: 61  EDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTPSKNKNK 120

Query: 121 KRVVSKIEKPSKDEASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAAL 180
           KRVVSKIEK SKDEASTD STPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAAL
Sbjct: 121 KRVVSKIEKSSKDEASTDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAAL 180

Query: 181 QATMKPIKRKNPGEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYN 240
           QATMKPIKRKNPGEEKKMSQE+MLLEAAQTEIMNLRNLERVLAREEEVKKRAIV KAVYN
Sbjct: 181 QATMKPIKRKNPGEEKKMSQEDMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVQKAVYN 240

Query: 241 GPRIQYLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAVCVITGLPARYRDPKTGLPYAT 300
           GPRIQYLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAVCVITGL ARYRDPKTGLPYAT
Sbjct: 241 GPRIQYLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAVCVITGLRARYRDPKTGLPYAT 296

Query: 301 KEAFKTIRER 311
           KEAFKTIRER
Sbjct: 301 KEAFKTIRER 296

[Close]

BLAST of HG10009382 vs. ExPASy TrEMBL
Match: A0A0A0KN54 (YL1_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G168770 PE=3 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 1.7e-141
Identity = 283/310 (91.29%), Postives = 288/310 (92.90%), Query Frame = 0


Query: 1   MDSSKEEDAPVFLDRSSRLTRGKRYRATFLAFLFFSWGMTKLLDEEVEDDELFWNQDALK 60
           MDSSKEED PVFLDRSSR+TRGKR              MTKLLDEE E+DELFWNQDAL+
Sbjct: 1   MDSSKEEDVPVFLDRSSRMTRGKR--------------MTKLLDEEAEEDELFWNQDALR 60

Query: 61  EDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTSSKNKNK 120
           EDEVDDEYEEEPEV DEFDSDFNEDESEPEEEAENEADER Q KKRLIFPGKT SKNKNK
Sbjct: 61  EDEVDDEYEEEPEVVDEFDSDFNEDESEPEEEAENEADERPQMKKRLIFPGKT-SKNKNK 120

Query: 121 KRVVSKIEKPSKDEASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAAL 180
           KR VSK+EKPSKDEASTD STPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAAL
Sbjct: 121 KRAVSKVEKPSKDEASTDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAAL 180

Query: 181 QATMKPIKRKNPGEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYN 240
           QATMKPIKRKNPGEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYN
Sbjct: 181 QATMKPIKRKNPGEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYN 240

Query: 241 GPRIQYLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAVCVITGLPARYRDPKTGLPYAT 300
           GPRIQYLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAVCVITGLPA+YRDPKTGLPYAT
Sbjct: 241 GPRIQYLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAVCVITGLPAKYRDPKTGLPYAT 295

Query: 301 KEAFKTIRER 311
           KEAFKTIRER
Sbjct: 301 KEAFKTIRER 295

[Close]

BLAST of HG10009382 vs. TAIR 10
Match: AT2G36740.1 (sequence-specific DNA binding transcription factors;DNA binding;DNA binding )

HSP 1 Score: 357.5 bits (916), Expect = 1.4e-98
Identity = 208/312 (66.67%), Postives = 246/312 (78.85%), Query Frame = 0


Query: 6   EEDAPVFLDRSSRLTRGKRYRATFLAFLFFSWGMTKLLDEEVEDDELFWNQDALKEDEVD 65
           EE+  VFLDR++R TRGKR              MTKLLD+EVE+DE FWNQ+ALKE+E D
Sbjct: 5   EEEPMVFLDRTTRATRGKR--------------MTKLLDDEVEEDEQFWNQEALKEEEHD 64

Query: 66  DEYEEEPEVADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTSSKNKNKK-RVV 125
           DEYE E EVADEFDSDFN+DE EP+  A NE + R   KKRLI+PGKT+SK K KK +VV
Sbjct: 65  DEYEAEREVADEFDSDFNDDEPEPDAVAVNEKELRDLPKKRLIYPGKTASKKKKKKTKVV 124

Query: 126 SKI------EKPSKDEASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRA 185
           S++      EKP  +E         E ++  +D E E+ +RKSTRTSV+VRQAERDA+RA
Sbjct: 125 SQLEYIPGDEKPG-EELGNKEQEEKEENEAQEDMEGEKVIRKSTRTSVVVRQAERDALRA 184

Query: 186 ALQATMKPIKRKNPGEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAV 245
           A+QAT KPI+RK  GEEK+M+QEEMLLEAAQTEIMNLRNLERVLAREEEVKK+AIVHKAV
Sbjct: 185 AIQATTKPIQRKKVGEEKRMTQEEMLLEAAQTEIMNLRNLERVLAREEEVKKKAIVHKAV 244

Query: 246 YNGPRIQYLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAVCVITGLPARYRDPKTGLPY 305
           Y GP+I+Y S++GC+YLEF  G+SF +ELST SVPYPEKAVCVITGLPA+YRDPKTGLPY
Sbjct: 245 YKGPQIRYHSKDGCNYLEFCNGASFNSELSTKSVPYPEKAVCVITGLPAKYRDPKTGLPY 301

Query: 306 ATKEAFKTIRER 311
           AT++AFK IRER
Sbjct: 305 ATRDAFKAIRER 301

The following BLAST results are available for this feature:

BLAST of HG10009382 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038907261.1	1.1e-147	94.52	SWR1 complex subunit 2 isoform X1 [Benincasa hispida] >XP_038907262.1 SWR1 compl...	[more]
XP_022970136.1	6.5e-143	92.58	SWR1 complex subunit 2 [Cucurbita maxima] >XP_022970137.1 SWR1 complex subunit 2...	[more]
KAG6579641.1	6.5e-143	92.58	SWR1 complex subunit 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023550830.1	1.9e-142	92.26	SWR1 complex subunit 2 [Cucurbita pepo subsp. pepo]	[more]
KAA0055098.1	1.9e-142	92.58	SWR1 complex subunit 2 [Cucumis melo var. makuwa]	[more]

BLAST of HG10009382 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IP06	1.9e-97	66.67	SWR1 complex subunit 2 OS=Arabidopsis thaliana OX=3702 GN=SWC2 PE=1 SV=1	[more]
Q9VKM6	4.4e-09	29.51	Vacuolar protein sorting-associated protein 72 homolog OS=Drosophila melanogaste...	[more]
Q5E9F6	3.7e-08	28.48	Vacuolar protein sorting-associated protein 72 homolog OS=Bos taurus OX=9913 GN=...	[more]
Q5R5V9	3.1e-07	28.80	Vacuolar protein sorting-associated protein 72 homolog OS=Pongo abelii OX=9601 G...	[more]
Q15906	7.0e-07	28.48	Vacuolar protein sorting-associated protein 72 homolog OS=Homo sapiens OX=9606 G...	[more]

BLAST of HG10009382 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HZS7	3.1e-143	92.58	SWR1 complex subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111469126 PE=3 SV=1	[more]
A0A5A7UJC3	9.1e-143	92.58	SWR1 complex subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2...	[more]
A0A1S3CUJ8	2.0e-142	92.26	SWR1 complex subunit 2 OS=Cucumis melo OX=3656 GN=LOC103504701 PE=3 SV=1	[more]
A0A6J1EM84	3.5e-142	92.26	SWR1 complex subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111435683 PE=3 SV=1	[more]
A0A0A0KN54	1.7e-141	91.29	YL1_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G168770 PE=3 ...	[more]

BLAST of HG10009382 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36740.1	1.4e-98	66.67	sequence-specific DNA binding transcription factors;DNA binding;DNA binding	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 198..225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..160
IPR013272	Vps72/YL1, C-terminal	SMART	SM00993	YL1_C_2	coord: 278..307 e-value: 8.7E-16 score: 68.5
IPR013272	Vps72/YL1, C-terminal	PFAM	PF08265	YL1_C	coord: 279..307 e-value: 2.9E-17 score: 62.1
IPR008895	Vps72/YL1 family	PFAM	PF05764	YL1	coord: 39..248 e-value: 4.6E-30 score: 105.5
IPR008895	Vps72/YL1 family	PANTHER	PTHR13275	YL-1 PROTEIN TRANSCRIPTION FACTOR-LIKE 1	coord: 4..314

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10009382.1	HG10009382.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043486	histone exchange
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006338	chromatin remodeling
cellular_component	GO:0005634	nucleus